BLASTX nr result
ID: Ephedra29_contig00017922
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00017922
(642 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJA90770.1 RNA-dependent RNA polymerase 2 [Ephedra trifurca] 165 2e-43
AJA90762.1 RNA-dependent RNA polymerase 2 [Cycas revoluta] 140 1e-34
AJP06346.1 RDR2 [Pinus tabuliformis] 140 1e-34
AJA90786.1 RNA-dependent RNA polymerase 2 [Pinus canariensis] 137 1e-33
AJA90778.1 RNA-dependent RNA polymerase 2 [Ginkgo biloba] 130 3e-31
KVI06345.1 Nucleotide-binding, alpha-beta plait [Cynara carduncu... 101 3e-21
XP_008220919.1 PREDICTED: probable RNA-dependent RNA polymerase ... 100 7e-21
XP_016563470.1 PREDICTED: RNA-dependent RNA polymerase 2 [Capsic... 100 7e-21
XP_019197287.1 PREDICTED: RNA-dependent RNA polymerase 2 [Ipomoe... 98 6e-20
ONI31850.1 hypothetical protein PRUPE_1G334600 [Prunus persica] ... 97 8e-20
XP_011071821.1 PREDICTED: RNA-dependent RNA polymerase 2 [Sesamu... 97 8e-20
XP_020170070.1 probable RNA-dependent RNA polymerase 1 [Aegilops... 95 7e-19
XP_012831187.1 PREDICTED: RNA-dependent RNA polymerase 2 [Erythr... 93 3e-18
XP_020089659.1 probable RNA-dependent RNA polymerase 1 [Ananas c... 92 4e-18
XP_020089658.1 probable RNA-dependent RNA polymerase 1 isoform X... 92 4e-18
KZV56554.1 RNA-dependent RNA polymerase 2-like [Dorcoceras hygro... 92 4e-18
XP_020089657.1 probable RNA-dependent RNA polymerase 1 isoform X... 92 4e-18
OAY79234.1 RNA-dependent RNA polymerase 1, partial [Ananas comosus] 92 5e-18
XP_017227942.1 PREDICTED: RNA-dependent RNA polymerase 2-like [D... 92 8e-18
XP_006345040.1 PREDICTED: RNA-dependent RNA polymerase 2 [Solanu... 92 8e-18
>AJA90770.1 RNA-dependent RNA polymerase 2 [Ephedra trifurca]
Length = 1111
Score = 165 bits (417), Expect = 2e-43
Identities = 91/205 (44%), Positives = 122/205 (59%), Gaps = 3/205 (1%)
Frame = -1
Query: 606 GACLHAGCXXXXXXXXXLWTASHVVVKFWFRRHYRVEFLVSQDGEDYKIELGFGDISRTH 427
G L AG LW+A +F F+ ++ F V E+YKIE DIS T+
Sbjct: 98 GGVLSAGNMVSESALSVLWSARDCNAEFSFQGQ-KISFYVGHGREEYKIEFRLDDISATY 156
Query: 426 SCIANDKH--CALFMFRSAAKLYQKVSSEEPNSGYINNYLKYCKGETNVKWARTTDFSKN 253
+ I D C L + A+++ KVS E S Y+ N+ K+CK + +V+W RTTDFS+N
Sbjct: 157 AYINEDTDTPCILLKLQRGARIFLKVSLRESFSAYLKNHFKFCKEDVDVQWIRTTDFSEN 216
Query: 252 SAIGQASLFCLEFANGWELPKFVAEMPFYQTMPVELGMKNSSFHPTVP-SVFNVRIPPGV 76
A+GQAS+FCL+F NG + P FV +PF++ M EL M+N P V VR+P GV
Sbjct: 217 CAVGQASVFCLDFGNGRKHPAFVENLPFFEMMQDELLMENDVLLSPCPYLVPYVRVPDGV 276
Query: 75 ILPYDVIFQVNSLVHHGILSAPALT 1
LPYD+ F++NSLVHHGILSAP LT
Sbjct: 277 TLPYDIAFKLNSLVHHGILSAPTLT 301
>AJA90762.1 RNA-dependent RNA polymerase 2 [Cycas revoluta]
Length = 1117
Score = 140 bits (352), Expect = 1e-34
Identities = 75/204 (36%), Positives = 121/204 (59%), Gaps = 3/204 (1%)
Frame = -1
Query: 606 GACLHAGCXXXXXXXXXLWTASHVVVKFWFRRHYRVEFLVSQDGEDYKIELGFGDISRTH 427
G LH GC LW++++VV +F R ++ F +S+ G +YK+E+ F DI +TH
Sbjct: 102 GGRLHVGCPVYHDAFYVLWSSTNVVAEFVPERE-KLNFFLSEGGMEYKLEVFFQDIIQTH 160
Query: 426 SCIANDKH--CALFMFRSAAKLYQKVSSEEPNSGYINNYLKYCKGETNVKWARTTDFSKN 253
+C + L +SA ++Y K++ + +S + + +CK ++ ++W RTTDFS
Sbjct: 161 ACTLQGRRTKAILLQLQSAPRIYHKMALHKLSSMFGEDRYNFCKEDSAIQWIRTTDFSAF 220
Query: 252 SAIGQASLFCLEFANGWELPKFVAEMPFYQTMPVELGMKNS-SFHPTVPSVFNVRIPPGV 76
+IGQ++ FCLE G E+ + +P+Y++M EL ++N S ++ V + P GV
Sbjct: 221 CSIGQSTSFCLELPYGVEVAQITEILPYYRSMEEELTLENGISISSSLSMVPIINAPEGV 280
Query: 75 ILPYDVIFQVNSLVHHGILSAPAL 4
LPY+++FQVNSLVH GILS P L
Sbjct: 281 NLPYEIMFQVNSLVHRGILSLPTL 304
>AJP06346.1 RDR2 [Pinus tabuliformis]
Length = 1123
Score = 140 bits (352), Expect = 1e-34
Identities = 79/217 (36%), Positives = 124/217 (57%), Gaps = 3/217 (1%)
Frame = -1
Query: 642 DFADRPELQTYFGACLHAGCXXXXXXXXXLWTASHVVVKFWFRRHYRVEFLVSQDGEDYK 463
D RP + GA L GC LW+AS VV +F R +++F VS+ G +YK
Sbjct: 88 DIVPRPTYCVH-GAELLVGCRVFHNVLCVLWSASDVVAEFALERE-KIDFFVSEGGVEYK 145
Query: 462 IELGFGDISRTHSCIANDKH--CALFMFRSAAKLYQKVSSEEPNSGYINNYLKYCKGETN 289
+E+GF DI ++++CI ++ L +SA K +QKV ++ + + K+CK +
Sbjct: 146 LEVGFRDIVQSYACILKERRTDAILVQLQSAPKCFQKVEVQKLSPECGEDRYKFCKEDIE 205
Query: 288 VKWARTTDFSKNSAIGQASLFCLEFANGWELPKFVAEMPFYQTMPVELGMKN-SSFHPTV 112
+W RTTDFS +IGQA+ FC+E + EL + MP+++ M E+ ++N +SF P
Sbjct: 206 FQWVRTTDFSAFCSIGQATSFCIELPSTVELAHIIESMPYHEEMEDEITLENGTSFFPFA 265
Query: 111 PSVFNVRIPPGVILPYDVIFQVNSLVHHGILSAPALT 1
V ++ P V L Y + FQ++SL+H+GILS P L+
Sbjct: 266 HMVPSLNAPEDVNLSYQIYFQISSLIHYGILSGPTLS 302
>AJA90786.1 RNA-dependent RNA polymerase 2 [Pinus canariensis]
Length = 1114
Score = 137 bits (344), Expect = 1e-33
Identities = 78/217 (35%), Positives = 124/217 (57%), Gaps = 3/217 (1%)
Frame = -1
Query: 642 DFADRPELQTYFGACLHAGCXXXXXXXXXLWTASHVVVKFWFRRHYRVEFLVSQDGEDYK 463
D RP + GA L GC LW+AS VV +F R +++F VS+ G +YK
Sbjct: 88 DIVPRPTYCVH-GAELLVGCRVFHNALCVLWSASDVVAEFALERE-KIDFFVSEGGVEYK 145
Query: 462 IELGFGDISRTHSCIANDKH--CALFMFRSAAKLYQKVSSEEPNSGYINNYLKYCKGETN 289
+E+GF DI ++++CI ++ L +SA K +QKV+ ++ + + K+CK +
Sbjct: 146 LEVGFRDIVQSYACILKERRTDAILVQLQSAPKCFQKVAVQKLSPECGEDRYKFCKEDIE 205
Query: 288 VKWARTTDFSKNSAIGQASLFCLEFANGWELPKFVAEMPFYQTMPVELGMKN-SSFHPTV 112
+W RTTDFS +IGQA+ FC+E + L + MP+++ M E+ ++N +SF P
Sbjct: 206 FQWVRTTDFSAFCSIGQATSFCIELPSTVGLAHIIESMPYHEEMEDEITLENGTSFFPFA 265
Query: 111 PSVFNVRIPPGVILPYDVIFQVNSLVHHGILSAPALT 1
V ++ P V L Y + FQ++SL+H+GILS P L+
Sbjct: 266 HIVPSLSAPEDVNLSYQIYFQISSLIHYGILSGPTLS 302
>AJA90778.1 RNA-dependent RNA polymerase 2 [Ginkgo biloba]
Length = 1114
Score = 130 bits (326), Expect = 3e-31
Identities = 76/204 (37%), Positives = 114/204 (55%), Gaps = 3/204 (1%)
Frame = -1
Query: 606 GACLHAGCXXXXXXXXXLWTASHVVVKFWFRRHYRVEFLVSQDGEDYKIELGFGDISRTH 427
G LH GC LW+++ VVV+F R ++ FL+S++G YK+E+ + DI +T
Sbjct: 104 GGKLHVGCRVFYDAFCVLWSSNDVVVEFVSERK-KLNFLLSENGRQYKLEVLYQDIVQTF 162
Query: 426 SCIANDKHCA--LFMFRSAAKLYQKVSSEEPNSGYINNYLKYCKGETNVKWARTTDFSKN 253
+ I + L +SA K++ K++ + S + ++ K+CK + +W RTTDFS
Sbjct: 163 AFIVKGRRTRGILLQMQSAPKIHVKMALHKLFSEFGDDRYKFCKEDIESQWVRTTDFSAF 222
Query: 252 SAIGQASLFCLEFANGWELPKFVAEMPFYQTMPVELGMK-NSSFHPTVPSVFNVRIPPGV 76
+IGQ+S FCLE NG E+ MP Y+ + EL ++ SSF + V V P V
Sbjct: 223 CSIGQSSAFCLELPNGVEVAHITESMPHYKALEEELTLEYGSSFSSSQSLVPIVNAPNDV 282
Query: 75 ILPYDVIFQVNSLVHHGILSAPAL 4
L Y +FQ+NSL+H GILS P L
Sbjct: 283 NLSYQTVFQINSLIHRGILSGPTL 306
>KVI06345.1 Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
scolymus]
Length = 1063
Score = 101 bits (252), Expect = 3e-21
Identities = 60/180 (33%), Positives = 91/180 (50%), Gaps = 4/180 (2%)
Frame = -1
Query: 531 VKFWFRRHYR-VEFLVSQDGEDYKIELGFGDISRTHSCI--ANDKHCALFMFRSAAKLYQ 361
VK W + +EF V G+ Y++EL F D+ C + + + L + A KLYQ
Sbjct: 130 VKAWVLPERKSLEFWVKHFGDCYRLELQFSDVLEAFPCSLHSQETNAVLLKLKHAPKLYQ 189
Query: 360 KVSSEEPNSGYINNYLKYCKGETNVKWARTTDFSKNSAIGQASLFCLEFANGWELPKFVA 181
K+S + + + CK + W RTTDFS +IGQ+ CLEF G
Sbjct: 190 KLSGSNVSPRFTPDRYHICKEDFEFTWVRTTDFSSTKSIGQSCTLCLEFKEGCSGLDSFT 249
Query: 180 EMPFYQTMPVELGMKN-SSFHPTVPSVFNVRIPPGVILPYDVIFQVNSLVHHGILSAPAL 4
+P Y ++L +K+ FH + V VR PP + LPY+++FQ+NSL+ LS P++
Sbjct: 250 SLPVYIKDLIDLSVKDGQEFHSSSDVVPLVRCPPELDLPYEILFQLNSLIQTQKLSLPSV 309
>XP_008220919.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Prunus mume]
Length = 1123
Score = 100 bits (249), Expect = 7e-21
Identities = 70/204 (34%), Positives = 102/204 (50%), Gaps = 6/204 (2%)
Frame = -1
Query: 597 LHAGCXXXXXXXXXLWTASHVVVKFWFRRHYRVEFLVSQDGEDYKIELGFGDISRTHSCI 418
LH GC LWTA+ V V F + + FL+ +YK++L + +I +
Sbjct: 102 LHFGCKIAHEKLHVLWTANDVSVDFGIKLRKFI-FLLKYHDLEYKLQLSYENIYKIEVHS 160
Query: 417 ANDKHCA---LFMFRSAAKLYQKVSSEEPNSG--YINNYLKYCKGETNVKWARTTDFSKN 253
+ A L A ++Y+K + SG Y N +L Y + + +W RTTDF+
Sbjct: 161 PRGRTAAKYLLIQLCGAPRIYKK---DVRCSGEVYENPFLNYFRDTPDDQWVRTTDFTPP 217
Query: 252 SAIGQASLFCLEFANGWELPKFVAEMPFYQTMPVELGMKNSSFHPTVPSV-FNVRIPPGV 76
AIGQ+ CLE G +LP F P Y+ E +++ S + P + V PPGV
Sbjct: 218 RAIGQSFTLCLELPYGLKLPDFQENFPEYKESIGEYILESGSSYSCNPDLGAMVCPPPGV 277
Query: 75 ILPYDVIFQVNSLVHHGILSAPAL 4
+PYD++F+VNSLV HG L PAL
Sbjct: 278 DVPYDILFKVNSLVQHGYLPGPAL 301
>XP_016563470.1 PREDICTED: RNA-dependent RNA polymerase 2 [Capsicum annuum]
Length = 1130
Score = 100 bits (249), Expect = 7e-21
Identities = 60/168 (35%), Positives = 89/168 (52%), Gaps = 2/168 (1%)
Frame = -1
Query: 501 VEFLVSQDGEDYKIELGFGDISRTHSCIANDKHCALFM-FRSAAKLYQKVSSEEPNSGYI 325
VEF V +GE Y++E+ FGD++ T C DK AL + + A KLYQ+VS S +
Sbjct: 142 VEFWVGYEGECYRLEVQFGDVAETCICALEDKKSALLLKLKYAPKLYQRVSGPAVASKFS 201
Query: 324 NNYLKYCKGETNVKWARTTDFSKNSAIGQASLFCLEFANGWELPKFVAEMPFYQTMPVEL 145
+ CK + W RTTDFS +IG +S C E +G F++ +P+Y +L
Sbjct: 202 ADRYHICKEDYEFLWVRTTDFSGIKSIGCSSSLCWELEDGLLSSDFLSSLPYYNNYVRDL 261
Query: 144 GM-KNSSFHPTVPSVFNVRIPPGVILPYDVIFQVNSLVHHGILSAPAL 4
+ K + V V P + LPY+++FQ+NSLVH +S A+
Sbjct: 262 YLDKVGDIYSASEFVPLVNFPSDLNLPYEILFQLNSLVHTQKISLGAI 309
>XP_019197287.1 PREDICTED: RNA-dependent RNA polymerase 2 [Ipomoea nil]
Length = 1120
Score = 97.8 bits (242), Expect = 6e-20
Identities = 58/181 (32%), Positives = 91/181 (50%), Gaps = 4/181 (2%)
Frame = -1
Query: 534 VVKFWFRRHYRVEFLVSQDGEDYKIELGFGDISRTHSCIAN---DKHCALFMFRSAAKLY 364
+++FW + SQDGE YK+E+ FGD+ T C + D LF + A K+Y
Sbjct: 140 IIEFW---------ISSQDGECYKLEVQFGDVVETSRCSLDHTEDHDAVLFKLKFAPKIY 190
Query: 363 QKVSSEEPNSGYINNYLKYCKGETNVKWARTTDFSKNSAIGQASLFCLEFANGWELPKFV 184
+KVS ++ S + ++ CK + + W RTTDFS ++G S C G +
Sbjct: 191 RKVSGKDVASKFSSDRYHICKEDFDFLWVRTTDFSDVKSVGYLSSLCWVIEEGLSETDIL 250
Query: 183 AEMPFYQTMPVELGM-KNSSFHPTVPSVFNVRIPPGVILPYDVIFQVNSLVHHGILSAPA 7
+ +P+Y V+L + K F V V+ P L Y+++FQ+NSLVH +S A
Sbjct: 251 SNLPYYNEETVDLFLEKGEEFSSESALVPLVKCPSDSTLAYEILFQLNSLVHTQKISLAA 310
Query: 6 L 4
+
Sbjct: 311 V 311
>ONI31850.1 hypothetical protein PRUPE_1G334600 [Prunus persica] ONI31851.1
hypothetical protein PRUPE_1G334600 [Prunus persica]
Length = 1123
Score = 97.4 bits (241), Expect = 8e-20
Identities = 65/201 (32%), Positives = 98/201 (48%), Gaps = 3/201 (1%)
Frame = -1
Query: 597 LHAGCXXXXXXXXXLWTASHVVVKFWFRRHYRVEFLVSQDGEDYKIELGFGDISRTHSCI 418
LH GC LWTA+ V V F + + FL+ +YK++L + +I +
Sbjct: 102 LHFGCKIADEKLHVLWTANDVSVDFGIKLRKFI-FLLKYHDLEYKLQLSYENIYKIEVHS 160
Query: 417 ANDKHCALFMFRSAAKLYQKVSSEEPNSG--YINNYLKYCKGETNVKWARTTDFSKNSAI 244
+ A ++ + ++ SG Y N +L Y + + +W RTTDF+ AI
Sbjct: 161 PRGRAAAKYLLIQLCGAPRIYKNDVRCSGEVYENPFLNYFRDTPDDQWVRTTDFTPPRAI 220
Query: 243 GQASLFCLEFANGWELPKFVAEMPFYQTMPVELGMKNSSFHPTVPSV-FNVRIPPGVILP 67
GQ+ CLE G +LP F P Y+ E +++ S + P + V PPGV +P
Sbjct: 221 GQSFTLCLELPYGLKLPDFQENFPEYKETQGEYILESGSSYSCNPDLGAMVCPPPGVDVP 280
Query: 66 YDVIFQVNSLVHHGILSAPAL 4
YD++F+VNSLV G L PAL
Sbjct: 281 YDILFKVNSLVQQGYLPGPAL 301
>XP_011071821.1 PREDICTED: RNA-dependent RNA polymerase 2 [Sesamum indicum]
Length = 1133
Score = 97.4 bits (241), Expect = 8e-20
Identities = 61/185 (32%), Positives = 91/185 (49%), Gaps = 9/185 (4%)
Frame = -1
Query: 531 VKFWFR-RHYRVEFLVSQDGEDYKIELGFGDISRTHSCIANDK----HCALFMFRSAAKL 367
V+ WF ++EF V+ +GE YK+E+ FGD+ T C + L + A K+
Sbjct: 137 VRLWFMPERKKLEFFVNHEGECYKLEVQFGDVLETRGCYLDGDGKKVDAILLKLKHAPKV 196
Query: 366 YQKVSSEEPNSGYINNYLKYCKGETNVKWARTTDFSKNSAIGQASLFCLEFANGWELPKF 187
Y+K+S + S + + CK + + W RTTDFS +IG S C E G
Sbjct: 197 YRKISGPKVASKFATDRYHICKEDFDFLWVRTTDFSNLKSIGYLSSLCWEIEEGLSSSDI 256
Query: 186 VAEMPFYQTMPVEL----GMKNSSFHPTVPSVFNVRIPPGVILPYDVIFQVNSLVHHGIL 19
+ +P+Y +EL G+K + VP V N P LPY+V+FQ+ SLVH +
Sbjct: 257 YSSLPYYSKDVMELTLEGGVKFNHSSDLVPLVTNY---PDFKLPYEVLFQLISLVHTQKM 313
Query: 18 SAPAL 4
S A+
Sbjct: 314 SLAAV 318
>XP_020170070.1 probable RNA-dependent RNA polymerase 1 [Aegilops tauschii subsp.
tauschii]
Length = 1120
Score = 94.7 bits (234), Expect = 7e-19
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 9/209 (4%)
Frame = -1
Query: 603 ACLHAGCXXXXXXXXXLWTASHVVVKFWFRRHYRVEFLVSQDGEDYKIELGFGDI--SRT 430
A LH GC LW+ + V ++F F +++F ++ + + YK+EL + I +
Sbjct: 105 ATLHFGCLLRERVLSVLWSGTGVSIEFGFAMK-KIDFCLTYNSKKYKLELSYESIWEIQI 163
Query: 429 HSCIANDKHCALFMFRSAAKLYQKVSSEEPNSGYINNYLKYCKGETNVKWARTTDFSKNS 250
H + K L +A K+Y++ + S Y + Y + +T +W RTTDF+ +
Sbjct: 164 HQPPGSQKKFLLIQVMAAPKIYEQ-NLRHSGSMYDDPSYNYFRDDTEDQWTRTTDFTPLA 222
Query: 249 AIGQASLFCLEFANGWELPKFVAEMPF-------YQTMPVELGMKNSSFHPTVPSVFNVR 91
+IGQ+ + CLE N +LP + + P N+ F P V S+++
Sbjct: 223 SIGQSYILCLEIPNDCDLPNIREYFVYCEVHNDDFHCQPGHSYSSNTCFVPIVKSLYSTN 282
Query: 90 IPPGVILPYDVIFQVNSLVHHGILSAPAL 4
+ PY++IF++N LV +GILS P L
Sbjct: 283 V------PYEIIFKINHLVQNGILSGPTL 305
>XP_012831187.1 PREDICTED: RNA-dependent RNA polymerase 2 [Erythranthe guttata]
EYU42543.1 hypothetical protein MIMGU_mgv1a000463mg
[Erythranthe guttata]
Length = 1135
Score = 92.8 bits (229), Expect = 3e-18
Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Frame = -1
Query: 522 WFR-RHYRVEFLVSQDGEDYKIELGFGDISRTHSCIAN----DKHCALFMFRSAAKLYQK 358
WF R++F+V DGE YK+E+ FGD++ + C + L + A K+Y+K
Sbjct: 134 WFMPERKRLDFVVIYDGESYKLEVQFGDVAESGRCCLDRGGEKVDAILLKLKHAPKVYKK 193
Query: 357 VSSEEPNSGY-INNYLKYCKGETNVKWARTTDFSKNSAIGQASLFCLEFANGWELPKFVA 181
+S + +S + + + CK + + W RTTDFSK +IG S C E G+
Sbjct: 194 ISGPKVSSRFPATDRYRICKEDFDFAWVRTTDFSKVKSIGYLSSLCWEIKEGFSSLDAYT 253
Query: 180 EMPFYQTMPVELGMKNSSFHPTVPSVFNVRIPPG---VILPYDVIFQVNSLVH 31
+P + +EL +++ + PS V I P +PY+V+FQ+NSLVH
Sbjct: 254 SLPCFSKDVIELYLEDGARFNNAPSSDLVPIIPNCPDFRVPYEVLFQINSLVH 306
>XP_020089659.1 probable RNA-dependent RNA polymerase 1 [Ananas comosus]
XP_020089661.1 probable RNA-dependent RNA polymerase 1
[Ananas comosus]
Length = 1133
Score = 92.4 bits (228), Expect = 4e-18
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 9/209 (4%)
Frame = -1
Query: 603 ACLHAGCXXXXXXXXXLWTASHVVVKFWFRRHYRVEFLVSQDGEDYKIELGFGDISRTHS 424
A LH GC LW+AS V V F F ++ F +S+ +YK+EL + I
Sbjct: 104 ATLHFGCPVSKRSFCVLWSASDVHVNFGFNLR-KIYFFLSKGSFEYKLELSYESIWEIQL 162
Query: 423 CIANDKHCALFMFRSAA--KLYQ------KVSSEEPNSGYINNYLKYCKGETNVKWARTT 268
++D+ +F+ AA K+Y+ + E+P L Y K + KW R+T
Sbjct: 163 HRSSDQGSQFLLFQMAAAPKIYELPLRSSSLVQEDP-------LLNYFKETPDDKWIRST 215
Query: 267 DFSKNSAIGQASLFCLEFANGWELPKFVAEMPFYQTMPVELGM-KNSSFHPTVPSVFNVR 91
DFS + ++GQ+S+ CL+ +ELP FY+ + + SS+ V V V
Sbjct: 216 DFSPSCSMGQSSVICLQLPYDYELPNIREYFVFYEEFNGHYELNRGSSYSCNVELVPIVE 275
Query: 90 IPPGVILPYDVIFQVNSLVHHGILSAPAL 4
P + +PY+++F++N +V +G +S P L
Sbjct: 276 PHPLIQVPYNILFKINQMVQNGTISGPTL 304
>XP_020089658.1 probable RNA-dependent RNA polymerase 1 isoform X2 [Ananas comosus]
Length = 1133
Score = 92.4 bits (228), Expect = 4e-18
Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 5/205 (2%)
Frame = -1
Query: 603 ACLHAGCXXXXXXXXXLWTASHVVVKFWFRRHYRVEFLVSQDGEDYKIELGFGDISRTHS 424
A LH GC LW+AS V V F F ++ F VSQ YK+EL + I
Sbjct: 104 ATLHFGCPVLKRSFCVLWSASDVRVNFGFNLR-KIYFFVSQGSFKYKLELSYESIWEIQL 162
Query: 423 CIANDKHCALFMFRSAA--KLYQKVSSEEPNSGYINN--YLKYCKGETNVKWARTTDFSK 256
++D+ +F+ AA K+Y+ +SG ++ L Y K + +W R+TDFS
Sbjct: 163 HRSSDQGSQFLLFQMAAAPKIYELALR---SSGLVHEDPLLNYFKETPDDQWIRSTDFSP 219
Query: 255 NSAIGQASLFCLEFANGWELPKFVAEMPFYQTMPVELGMKNS-SFHPTVPSVFNVRIPPG 79
+ ++GQ+S+ CL+ +ELP FY+ + S+ + V V P
Sbjct: 220 SCSMGQSSVICLQLPYDYELPNIHEYFVFYEEFNGHYELNGGYSYSCNMELVPIVEPHPW 279
Query: 78 VILPYDVIFQVNSLVHHGILSAPAL 4
+ +PY ++F++N +V +GI+S P L
Sbjct: 280 IHVPYKILFKINQMVQNGIISGPTL 304
>KZV56554.1 RNA-dependent RNA polymerase 2-like [Dorcoceras hygrometricum]
Length = 1143
Score = 92.4 bits (228), Expect = 4e-18
Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 6/178 (3%)
Frame = -1
Query: 531 VKFW-FRRHYRVEFLVSQDGEDYKIELGFGDISRTHSC-IANDKH---CALFMFRSAAKL 367
VK W F ++EF V GE YK+E+GFGD+ +T C + +K L + A K+
Sbjct: 134 VKLWVFPEKRKLEFFVKHTGECYKLEVGFGDVLQTQGCCLGGNKENVDAILLQLKHAPKI 193
Query: 366 YQKVSSEEPNSGYINNYLKYCKGETNVKWARTTDFSKNSAIGQASLFCLEFANGWELPKF 187
++KVS S + + CK + + W RTTDFS +IG S C + +
Sbjct: 194 FKKVSGSNVASRFRTDRYHICKEDFDFLWVRTTDFSDVKSIGYLSCLCWKIEEKFSSLNI 253
Query: 186 VAEMPFYQTMPVELGMKNSSFHPTVPSVFN-VRIPPGVILPYDVIFQVNSLVHHGILS 16
+ PFY+ +EL ++ P+ P++ V L Y+V++Q+NSLVH LS
Sbjct: 254 YSCFPFYEKDVMELVLEERETFPSSPNLVPIVANSSDFSLDYEVLYQLNSLVHTQKLS 311
>XP_020089657.1 probable RNA-dependent RNA polymerase 1 isoform X1 [Ananas comosus]
Length = 1147
Score = 92.4 bits (228), Expect = 4e-18
Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 5/205 (2%)
Frame = -1
Query: 603 ACLHAGCXXXXXXXXXLWTASHVVVKFWFRRHYRVEFLVSQDGEDYKIELGFGDISRTHS 424
A LH GC LW+AS V V F F ++ F VSQ YK+EL + I
Sbjct: 118 ATLHFGCPVLKRSFCVLWSASDVRVNFGFNLR-KIYFFVSQGSFKYKLELSYESIWEIQL 176
Query: 423 CIANDKHCALFMFRSAA--KLYQKVSSEEPNSGYINN--YLKYCKGETNVKWARTTDFSK 256
++D+ +F+ AA K+Y+ +SG ++ L Y K + +W R+TDFS
Sbjct: 177 HRSSDQGSQFLLFQMAAAPKIYELALR---SSGLVHEDPLLNYFKETPDDQWIRSTDFSP 233
Query: 255 NSAIGQASLFCLEFANGWELPKFVAEMPFYQTMPVELGMKNS-SFHPTVPSVFNVRIPPG 79
+ ++GQ+S+ CL+ +ELP FY+ + S+ + V V P
Sbjct: 234 SCSMGQSSVICLQLPYDYELPNIHEYFVFYEEFNGHYELNGGYSYSCNMELVPIVEPHPW 293
Query: 78 VILPYDVIFQVNSLVHHGILSAPAL 4
+ +PY ++F++N +V +GI+S P L
Sbjct: 294 IHVPYKILFKINQMVQNGIISGPTL 318
>OAY79234.1 RNA-dependent RNA polymerase 1, partial [Ananas comosus]
Length = 3431
Score = 92.4 bits (228), Expect = 5e-18
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 9/209 (4%)
Frame = -1
Query: 603 ACLHAGCXXXXXXXXXLWTASHVVVKFWFRRHYRVEFLVSQDGEDYKIELGFGDISRTHS 424
A LH GC LW+AS V V F F ++ F +S+ +YK+EL + I
Sbjct: 2384 ATLHFGCPVSKRSFCVLWSASDVHVNFGFNLR-KIYFFLSKGSFEYKLELSYESIWEIQL 2442
Query: 423 CIANDKHCALFMFRSAA--KLYQ------KVSSEEPNSGYINNYLKYCKGETNVKWARTT 268
++D+ +F+ AA K+Y+ + E+P L Y K + KW R+T
Sbjct: 2443 HRSSDQGSQFLLFQMAAAPKIYELPLRSSSLVQEDP-------LLNYFKETPDDKWIRST 2495
Query: 267 DFSKNSAIGQASLFCLEFANGWELPKFVAEMPFYQTMPVELGM-KNSSFHPTVPSVFNVR 91
DFS + ++GQ+S+ CL+ +ELP FY+ + + SS+ V V V
Sbjct: 2496 DFSPSCSMGQSSVICLQLPYDYELPNIREYFVFYEEFNGHYELNRGSSYSCNVELVPIVE 2555
Query: 90 IPPGVILPYDVIFQVNSLVHHGILSAPAL 4
P + +PY+++F++N +V +G +S P L
Sbjct: 2556 PHPLIQVPYNILFKINQMVQNGTISGPTL 2584
Score = 85.5 bits (210), Expect = 1e-15
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 9/209 (4%)
Frame = -1
Query: 603 ACLHAGCXXXXXXXXXLWTASHVVVKFWFRRHYRVEFLVSQDGEDYKIELGFGDISRTHS 424
A LH GC LW+AS V V F F ++ F VS+ +YK+EL + I
Sbjct: 1252 ATLHFGCPVLKRSFCVLWSASDVRVNFGFNLR-KIYFFVSKGSFEYKLELSYESIWEIQL 1310
Query: 423 CIANDKHCAL------FMFRSAAKLYQKVSSEEPNSGYINN--YLKYCKGETNVKWARTT 268
++D+ +A K+Y+ +SG ++ L Y K + +W R+T
Sbjct: 1311 HRSSDQETDFQFWFMKLQMAAAPKIYELALR---SSGLVHEDPLLNYFKETPDDQWIRST 1367
Query: 267 DFSKNSAIGQASLFCLEFANGWELPKFVAEMPFYQTMPVELGMKN-SSFHPTVPSVFNVR 91
DFS + ++GQ+S+ CL+ +ELP FY+ + + SS+ + V V
Sbjct: 1368 DFSPSCSMGQSSVICLQLPYDYELPNISEYFLFYEEFDGHYELNSGSSYSCNMELVPIVE 1427
Query: 90 IPPGVILPYDVIFQVNSLVHHGILSAPAL 4
P + +PY ++F++N +V +G +S P L
Sbjct: 1428 PHPLIQVPYKILFKINQMVQNGTISGPTL 1456
Score = 82.0 bits (201), Expect = 2e-14
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 5/203 (2%)
Frame = -1
Query: 597 LHAGCXXXXXXXXXLWTASHVVVKFWFRRHYRVEFLVSQDGEDYKIELGFGDI--SRTHS 424
+H GC LW+A V V F F ++ S G +YK+EL + I + H
Sbjct: 143 VHFGCPVSKRSFCVLWSAYDVHVTFGFNLR-KLYLFFSMRGLEYKLELSYESIWEIQLHR 201
Query: 423 CIANDKHCALFMFRSAAKLYQKVSSEEPNSGYINN--YLKYCKGETNVKWARTTDFSKNS 250
L +A K+Y+ +SG ++ +L Y K + +W R+TDFS +
Sbjct: 202 SSYQGSQFLLIQMAAAPKIYELPLC---SSGLVHKDPFLNYFKETPDDQWIRSTDFSPSC 258
Query: 249 AIGQASLFCLEFANGWELPKFVAEMPFYQTMPVELGM-KNSSFHPTVPSVFNVRIPPGVI 73
++GQ+S+ CL+ +ELP FY+ + + S+ + V V P +
Sbjct: 259 SMGQSSVICLQLPYDYELPNIHEYFVFYEEFNGHYELNRGYSYSCNMELVPIVEPHPWIH 318
Query: 72 LPYDVIFQVNSLVHHGILSAPAL 4
+PY ++F++N +V +GI+S P L
Sbjct: 319 VPYKILFKINQMVQNGIISGPTL 341
>XP_017227942.1 PREDICTED: RNA-dependent RNA polymerase 2-like [Daucus carota
subsp. sativus]
Length = 1118
Score = 91.7 bits (226), Expect = 8e-18
Identities = 55/169 (32%), Positives = 87/169 (51%), Gaps = 4/169 (2%)
Frame = -1
Query: 498 EFLVSQDGEDYKIELGFGDISRTHSCIAN---DKHCALFMFRSAAKLYQKVSSEEPNSGY 328
EF + G YK+E+ FGD+ C N + + L + A ++Y+KV ++ +
Sbjct: 142 EFWLDCGGVGYKLEVLFGDVLEVSKCCLNGAAEPNAVLLTLKYAPRVYKKVLGPHVDTRF 201
Query: 327 INNYLKYCKGETNVKWARTTDFSKNSAIGQASLFCLEFANGWELPKFVAEMPFYQTMPVE 148
++ CK + + W R TDFS +IGQ+ FC EF G +++PFY+ +
Sbjct: 202 SSDRYHVCKEDFDFLWIRETDFSSVKSIGQSCAFCCEFVKGASGLDAFSQLPFYKNEFTK 261
Query: 147 LGMKNS-SFHPTVPSVFNVRIPPGVILPYDVIFQVNSLVHHGILSAPAL 4
L +K S FH + VR P L Y+V+FQ+N+LVH+ LS A+
Sbjct: 262 LVLKESEEFHTSSELNPLVRCPQNSNLSYEVLFQLNALVHNHKLSLAAV 310
>XP_006345040.1 PREDICTED: RNA-dependent RNA polymerase 2 [Solanum tuberosum]
Length = 1119
Score = 91.7 bits (226), Expect = 8e-18
Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 2/168 (1%)
Frame = -1
Query: 501 VEFLVSQDGEDYKIELGFGDISRTHSC-IANDKHCALFMFRSAAKLYQKVSSEEPNSGYI 325
+EF VS E Y++E+ FGD+ C + N K L + A KLYQ+VS S +
Sbjct: 141 LEFWVSHAEECYRLEVQFGDVVEATVCSLENQKSALLLKLKHAPKLYQRVSGPAVASKFS 200
Query: 324 NNYLKYCKGETNVKWARTTDFSKNSAIGQASLFCLEFANGWELPKFVAEMPFYQTMPVEL 145
+ CK + W RTTDFS +IG +S C E +GW ++ +P ++L
Sbjct: 201 ADRYHICKEDCEFLWVRTTDFSNIKSIGCSSSLCWETEDGWLSSDLLSSLPCCNKDVIDL 260
Query: 144 GM-KNSSFHPTVPSVFNVRIPPGVILPYDVIFQVNSLVHHGILSAPAL 4
+ K + V VRIP + LPY+++FQ+NSLV +S A+
Sbjct: 261 DLDKVGDIYSGSEFVPLVRIPSDLKLPYEILFQLNSLVQTQKISLGAV 308