BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00017616
         (792 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAQ85592.1 DNA-directed RNA polymerase III large subunit [Klebso...   325   3e-99
XP_001757221.1 predicted protein [Physcomitrella patens] EDQ7808...   315   1e-95
XP_002985715.1 hypothetical protein SELMODRAFT_446351 [Selaginel...   306   4e-92
XP_002974416.1 hypothetical protein SELMODRAFT_442419 [Selaginel...   305   4e-92
XP_011627269.1 PREDICTED: DNA-directed RNA polymerase III subuni...   294   7e-88
XP_006828249.1 PREDICTED: DNA-directed RNA polymerase III subuni...   294   7e-88
XP_003075225.1 RNA polymerase I, large subunit (ISS) [Ostreococc...   288   7e-86
CEG01150.1 DNA-directed RNA polymerase III largest subunit [Ostr...   288   7e-86
XP_001416093.1 predicted protein [Ostreococcus lucimarinus CCE99...   286   3e-85
XP_003057499.1 predicted protein [Micromonas pusilla CCMP1545] E...   270   2e-79
XP_002502032.1 predicted protein [Micromonas commoda] ACO63290.1...   268   2e-78
XP_008813807.1 PREDICTED: DNA-directed RNA polymerase III subuni...   242   1e-75
ONM16387.1 DNA-directed RNA polymerase III subunit 1 [Zea mays]       242   2e-73
CDP06311.1 unnamed protein product [Coffea canephora]                 233   2e-72
XP_018682186.1 PREDICTED: DNA-directed RNA polymerase III subuni...   249   3e-72
JAT40403.1 DNA-directed RNA polymerase III subunit RPC1 [Anthuri...   249   3e-72
XP_020113846.1 DNA-directed RNA polymerase III subunit 1 isoform...   248   9e-72
XP_010265589.1 PREDICTED: DNA-directed RNA polymerase III subuni...   248   1e-71
XP_020113845.1 DNA-directed RNA polymerase III subunit 1 isoform...   248   2e-71
XP_020113843.1 DNA-directed RNA polymerase III subunit 1 isoform...   248   2e-71

>GAQ85592.1 DNA-directed RNA polymerase III large subunit [Klebsormidium
           flaccidum]
          Length = 1403

 Score =  325 bits (834), Expect = 3e-99
 Identities = 143/252 (56%), Positives = 197/252 (78%)
 Frame = +3

Query: 36  PTVSINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGI 215
           P  +I FTK+ + +D GPRKIKS+ F  MS  E+VK +ELHV+E +L+  P+RKP P+GI
Sbjct: 14  PESTIAFTKKMYRDDPGPRKIKSIQFGVMSAQEMVKVSELHVFERNLYQQPERKPAPNGI 73

Query: 216 LDTHLGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARV 395
           LDT LGT+ K G+C+TC GK +DC GH+G+I+LALPV H+GYFK+ + ILQCICKSCAR+
Sbjct: 74  LDTKLGTTDKRGECSTCKGKLTDCAGHFGHIRLALPVLHIGYFKHCIAILQCICKSCARI 133

Query: 396 LLFEDDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRI 575
           LL ED+RK+FLRR RNP  E+LQK+A+FK + D+CKR + CP CGD NG VKK T TL+I
Sbjct: 134 LLPEDERKVFLRRFRNPSVEILQKKAMFKKVADRCKRQRYCPHCGDVNGVVKKATQTLKI 193

Query: 576 THEKYSKAEDIRSEYLTEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVL 755
            H+KY+K   I+ ++  EF E  + ++ELK  LN++QDDL P+++L LF +++DEDC++L
Sbjct: 194 MHDKYAKDVSIKEDFQEEFQEPAKHNRELKTHLNKVQDDLNPIRILGLFERILDEDCEIL 253

Query: 756 YLHGRPEKLIVT 791
            +HGRPE+L++T
Sbjct: 254 DVHGRPERLVMT 265


>XP_001757221.1 predicted protein [Physcomitrella patens] EDQ78080.1 predicted
           protein [Physcomitrella patens]
          Length = 1397

 Score =  315 bits (808), Expect = 1e-95
 Identities = 144/250 (57%), Positives = 194/250 (77%), Gaps = 1/250 (0%)
 Frame = +3

Query: 45  SINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDT 224
           SINF+K+PFIED GPRKI+S+ F TMS  +IVKA+ELHVYE+ L+  P+R P P+ ++DT
Sbjct: 11  SINFSKRPFIEDVGPRKIESIRFGTMSKQDIVKASELHVYESMLYTMPERNPAPYSVVDT 70

Query: 225 HLGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLF 404
            LGT+ K G+C+TC GK +DCPGH+G+ KL +PVFH+GY KNIL ILQCICKSCAR+L+ 
Sbjct: 71  RLGTTNKKGECSTCFGKLADCPGHFGHTKLEMPVFHIGYLKNILQILQCICKSCARILMP 130

Query: 405 EDDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTS-TLRITH 581
           E++ KL LR+MRNPR EVLQ+RA+ K + D+CKRV+ C RCGDYNG VKK+    +++ H
Sbjct: 131 EEECKLILRKMRNPRIEVLQRRAVLKKVIDRCKRVRVCTRCGDYNGVVKKMAQPPVKLIH 190

Query: 582 EKYSKAEDIRSEYLTEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVLYL 761
           +KY KA D++ E +    +A++   ELK  +NR+ D+L P++VL LF  M+++DC+VL L
Sbjct: 191 DKYGKALDLKEEMIVSLEDAMKCKPELKNCINRVYDNLDPMRVLQLFESMIEQDCEVLDL 250

Query: 762 HGRPEKLIVT 791
             RPEKLIVT
Sbjct: 251 AERPEKLIVT 260


>XP_002985715.1 hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
           EFJ13293.1 hypothetical protein SELMODRAFT_446351
           [Selaginella moellendorffii]
          Length = 1393

 Score =  306 bits (783), Expect = 4e-92
 Identities = 145/251 (57%), Positives = 191/251 (76%), Gaps = 3/251 (1%)
 Frame = +3

Query: 45  SINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDT 224
           SINFTK   ++DAGPRKIKS+ F+TMS  E+ K AE+ ++E SL+  P+RKP P+G+LDT
Sbjct: 15  SINFTKGLHLDDAGPRKIKSMRFSTMSSEEVTKTAEVQIFEHSLYQLPERKPLPYGVLDT 74

Query: 225 HLGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICK---SCARV 395
            LGTS K GQC TC+GK +DCPGH+GYIKL LPVFH+GYFK+I+ ILQCICK   S   V
Sbjct: 75  RLGTSNKKGQCTTCDGKLADCPGHFGYIKLELPVFHIGYFKDIIVILQCICKASFSLLEV 134

Query: 396 LLFEDDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRI 575
           +  +++R+ + RRM+NPR+E+L+K+   K IND CK+V+ CPRCGD NG VKKL STL+I
Sbjct: 135 VASQEERQKWQRRMQNPRSEILRKKEYLKKINDLCKKVRACPRCGDINGVVKKLGSTLKI 194

Query: 576 THEKYSKAEDIRSEYLTEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVL 755
            H+KY+K  +   E   +F +AV+ +KE+K ++  IQ+DLTPLKVL LF K++ EDC VL
Sbjct: 195 IHDKYAKNYEAFEEMAHKFDDAVKVNKEMKGYMKNIQEDLTPLKVLGLFEKIIGEDCVVL 254

Query: 756 YLHGRPEKLIV 788
            L  RPE+LIV
Sbjct: 255 DLVDRPEQLIV 265


>XP_002974416.1 hypothetical protein SELMODRAFT_442419 [Selaginella moellendorffii]
           EFJ24638.1 hypothetical protein SELMODRAFT_442419
           [Selaginella moellendorffii]
          Length = 1348

 Score =  305 bits (782), Expect = 4e-92
 Identities = 145/251 (57%), Positives = 191/251 (76%), Gaps = 3/251 (1%)
 Frame = +3

Query: 45  SINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDT 224
           SINFTK   ++DAGPRKIKS+ F+TMS  E+ K AE+ ++E SL+  P+RKP P+G+LDT
Sbjct: 15  SINFTKGLHLDDAGPRKIKSMRFSTMSSEEVTKTAEVQIFEHSLYQLPERKPLPYGVLDT 74

Query: 225 HLGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICK---SCARV 395
            LGTS K GQC TC+GK +DCPGH+GYIKL LPVFH+GYFK+I+ ILQCICK   S   V
Sbjct: 75  RLGTSNKKGQCTTCDGKLADCPGHFGYIKLELPVFHIGYFKDIIVILQCICKASFSFLEV 134

Query: 396 LLFEDDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRI 575
           +  +++R+ + RRM+NPR+E+L+K+   K IND CK+V+ CPRCGD NG VKKL STL+I
Sbjct: 135 VASQEERQKWQRRMQNPRSEILRKKEYLKKINDLCKKVRACPRCGDINGVVKKLGSTLKI 194

Query: 576 THEKYSKAEDIRSEYLTEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVL 755
            H+KY+K  +   E   +F +AV+ +KE+K ++  IQ+DLTPLKVL LF K++ EDC VL
Sbjct: 195 IHDKYAKNYEAFEEMAHKFDDAVKVNKEMKGYMKNIQEDLTPLKVLGLFEKIIGEDCVVL 254

Query: 756 YLHGRPEKLIV 788
            L  RPE+LIV
Sbjct: 255 DLVDRPEQLIV 265


>XP_011627269.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X2
           [Amborella trichopoda]
          Length = 1367

 Score =  294 bits (752), Expect = 7e-88
 Identities = 144/249 (57%), Positives = 180/249 (72%)
 Frame = +3

Query: 45  SINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDT 224
           + NFTK+PF+ED GPRKIKSV F  +SG EIVKAAE  VY+   +   D KP  HG+LDT
Sbjct: 7   AFNFTKKPFVEDIGPRKIKSVQFCMLSGPEIVKAAETQVYKRDYYNRTDLKPAEHGVLDT 66

Query: 225 HLGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLF 404
            +G S K G CATC G F  CPGH+GY+KLALPVFHVGYF+  + +LQCICKSCAR+LLF
Sbjct: 67  RMGFSTKSGSCATCFGDFQTCPGHFGYLKLALPVFHVGYFRTTIIVLQCICKSCARILLF 126

Query: 405 EDDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRITHE 584
           E++RK FL+++RNPRAE+ QK    K + DKCKRV+ CPRCGDYNG VKK   T RI+H+
Sbjct: 127 EEERKQFLKKIRNPRAELHQKNDFVKKVIDKCKRVRICPRCGDYNGVVKKAGPTFRISHD 186

Query: 585 KYSKAEDIRSEYLTEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVLYLH 764
           + SKA     +   E   A+ Q K   +  N + ++LTP + L LF +MVDEDCD+LYL+
Sbjct: 187 R-SKAN--YDKLTKECKTAISQTKYSNSDFNMV-ENLTPQRALALFERMVDEDCDLLYLY 242

Query: 765 GRPEKLIVT 791
            RPEKLI+T
Sbjct: 243 DRPEKLIIT 251


>XP_006828249.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc1 isoform X1
           [Amborella trichopoda] ERM95665.1 hypothetical protein
           AMTR_s00023p00196820 [Amborella trichopoda]
          Length = 1383

 Score =  294 bits (752), Expect = 7e-88
 Identities = 144/249 (57%), Positives = 180/249 (72%)
 Frame = +3

Query: 45  SINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDT 224
           + NFTK+PF+ED GPRKIKSV F  +SG EIVKAAE  VY+   +   D KP  HG+LDT
Sbjct: 7   AFNFTKKPFVEDIGPRKIKSVQFCMLSGPEIVKAAETQVYKRDYYNRTDLKPAEHGVLDT 66

Query: 225 HLGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLF 404
            +G S K G CATC G F  CPGH+GY+KLALPVFHVGYF+  + +LQCICKSCAR+LLF
Sbjct: 67  RMGFSTKSGSCATCFGDFQTCPGHFGYLKLALPVFHVGYFRTTIIVLQCICKSCARILLF 126

Query: 405 EDDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRITHE 584
           E++RK FL+++RNPRAE+ QK    K + DKCKRV+ CPRCGDYNG VKK   T RI+H+
Sbjct: 127 EEERKQFLKKIRNPRAELHQKNDFVKKVIDKCKRVRICPRCGDYNGVVKKAGPTFRISHD 186

Query: 585 KYSKAEDIRSEYLTEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVLYLH 764
           + SKA     +   E   A+ Q K   +  N + ++LTP + L LF +MVDEDCD+LYL+
Sbjct: 187 R-SKAN--YDKLTKECKTAISQTKYSNSDFNMV-ENLTPQRALALFERMVDEDCDLLYLY 242

Query: 765 GRPEKLIVT 791
            RPEKLI+T
Sbjct: 243 DRPEKLIIT 251


>XP_003075225.1 RNA polymerase I, large subunit (ISS) [Ostreococcus tauri]
          Length = 1406

 Score =  288 bits (738), Expect = 7e-86
 Identities = 131/263 (49%), Positives = 185/263 (70%), Gaps = 1/263 (0%)
 Frame = +3

Query: 6   RDNPFAHNPGPTVSINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMF 185
           RD+     P    +I FTK PF   + PRKI+SV F+ MS +EI +A   HV+E +L+  
Sbjct: 5   RDDVRQEAPADAAAIEFTKIPFAPASTPRKIRSVKFSLMSSSEIARAGVFHVFERNLYQM 64

Query: 186 PDRKPCPHGILDTHLGTSYKIG-QCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNI 362
           P R P  +GILD  +GT+ K G +CATC G   DC GH+GYIKL LPVFH+GYFKNI+++
Sbjct: 65  PQRTPMVNGILDPRMGTTDKRGGECATCRGSMVDCAGHFGYIKLELPVFHIGYFKNIISV 124

Query: 363 LQCICKSCARVLLFEDDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNG 542
           LQC+CK C+R+LL EDD+  FL+R RNPR E+ Q+R L+K + +KCKR + CP CGDYNG
Sbjct: 125 LQCVCKGCSRILLNEDDQATFLKRYRNPRLELTQRRLLYKKLTEKCKRCRICPHCGDYNG 184

Query: 543 TVKKLTSTLRITHEKYSKAEDIRSEYLTEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLF 722
             K+   TL+I HEKYSK   +  E+L EF  A++ +++L+A L ++QDDL P++VL++ 
Sbjct: 185 VTKRAGQTLKIVHEKYSKNPALLEEFLKEFETALKYNEQLRASLPKVQDDLNPIRVLSIL 244

Query: 723 TKMVDEDCDVLYLHGRPEKLIVT 791
            ++ D+DC++L +  RPE L++T
Sbjct: 245 QRITDQDCELLDIADRPEHLLLT 267


>CEG01150.1 DNA-directed RNA polymerase III largest subunit [Ostreococcus
           tauri]
          Length = 1422

 Score =  288 bits (738), Expect = 7e-86
 Identities = 131/263 (49%), Positives = 185/263 (70%), Gaps = 1/263 (0%)
 Frame = +3

Query: 6   RDNPFAHNPGPTVSINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMF 185
           RD+     P    +I FTK PF   + PRKI+SV F+ MS +EI +A   HV+E +L+  
Sbjct: 5   RDDVRQEAPADAAAIEFTKIPFAPASTPRKIRSVKFSLMSSSEIARAGVFHVFERNLYQM 64

Query: 186 PDRKPCPHGILDTHLGTSYKIG-QCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNI 362
           P R P  +GILD  +GT+ K G +CATC G   DC GH+GYIKL LPVFH+GYFKNI+++
Sbjct: 65  PQRTPMVNGILDPRMGTTDKRGGECATCRGSMVDCAGHFGYIKLELPVFHIGYFKNIISV 124

Query: 363 LQCICKSCARVLLFEDDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNG 542
           LQC+CK C+R+LL EDD+  FL+R RNPR E+ Q+R L+K + +KCKR + CP CGDYNG
Sbjct: 125 LQCVCKGCSRILLNEDDQATFLKRYRNPRLELTQRRLLYKKLTEKCKRCRICPHCGDYNG 184

Query: 543 TVKKLTSTLRITHEKYSKAEDIRSEYLTEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLF 722
             K+   TL+I HEKYSK   +  E+L EF  A++ +++L+A L ++QDDL P++VL++ 
Sbjct: 185 VTKRAGQTLKIVHEKYSKNPALLEEFLKEFETALKYNEQLRASLPKVQDDLNPIRVLSIL 244

Query: 723 TKMVDEDCDVLYLHGRPEKLIVT 791
            ++ D+DC++L +  RPE L++T
Sbjct: 245 QRITDQDCELLDIADRPEHLLLT 267


>XP_001416093.1 predicted protein [Ostreococcus lucimarinus CCE9901] ABO94385.1
           predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1395

 Score =  286 bits (733), Expect = 3e-85
 Identities = 127/252 (50%), Positives = 182/252 (72%), Gaps = 1/252 (0%)
 Frame = +3

Query: 39  TVSINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGIL 218
           T +I+FTK PF   + PRKI +V F+ MS +EI +A   HV+E +L+  P R P P+GIL
Sbjct: 15  TAAIDFTKTPFAPASTPRKISAVRFSLMSSSEIGRAGVFHVFERNLYQMPQRTPMPNGIL 74

Query: 219 DTHLGTSYKIG-QCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARV 395
           D  +GT+ K G +CATC G   DC GH+GYIKL LPVFH+GYFKNI+++LQC+CK+C+R+
Sbjct: 75  DPRMGTTDKRGGECATCRGNMVDCAGHFGYIKLELPVFHIGYFKNIISVLQCVCKNCSRI 134

Query: 396 LLFEDDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRI 575
           LL EDD+ +FL+R RNPR E+ Q+R L+K + +KCKR + CP CGDYNG  K+   TL+I
Sbjct: 135 LLNEDDQDMFLKRYRNPRLEITQRRLLYKKLTEKCKRCRTCPHCGDYNGVTKRAGQTLKI 194

Query: 576 THEKYSKAEDIRSEYLTEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVL 755
            HEKYSK   +  E++ EF  A++ +++L+A L ++QDDL P++VL +  ++   DC++L
Sbjct: 195 VHEKYSKNPALLEEFMKEFETALKYNEQLRASLPKVQDDLNPIRVLGILQRVTSADCELL 254

Query: 756 YLHGRPEKLIVT 791
            +  RPE L++T
Sbjct: 255 DIADRPEHLLLT 266


>XP_003057499.1 predicted protein [Micromonas pusilla CCMP1545] EEH59144.1
           predicted protein [Micromonas pusilla CCMP1545]
          Length = 1591

 Score =  270 bits (691), Expect = 2e-79
 Identities = 127/249 (51%), Positives = 176/249 (70%), Gaps = 1/249 (0%)
 Frame = +3

Query: 48  INFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDTH 227
           + FTK PF E   PRKI+SV F+ MS  EI K    HVYE +L+  P R P P GILD  
Sbjct: 20  VEFTKDPFEEPTAPRKIRSVRFSLMSPQEISKVGVFHVYERNLYQMPQRVPLPGGILDPR 79

Query: 228 LGTSYKIG-QCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLF 404
           +GT+ K G +CATC GK  DC GH+GY+KL LPVFH+GYFKN+++ILQ +CK+C+RV+L 
Sbjct: 80  MGTTDKKGAECATCKGKLIDCAGHFGYVKLELPVFHIGYFKNVISILQQVCKTCSRVMLP 139

Query: 405 EDDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRITHE 584
           E++ + +LRR RNPR E + +RAL K + D+CKR + C  CG  NG VK+   +L+I HE
Sbjct: 140 EEEHEQYLRRFRNPRLENVPRRALSKKMADRCKRCRTCYYCGAANGVVKRAGQSLKIVHE 199

Query: 585 KYSKAEDIRSEYLTEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVLYLH 764
           KYSK  ++  EYL +F EAV+ + +LK  L+R+QDDL P++V+++F ++   DC++L + 
Sbjct: 200 KYSKNPELMEEYLKQFEEAVKFNDQLKQNLSRVQDDLNPIRVISIFRRISPMDCELLDIA 259

Query: 765 GRPEKLIVT 791
            RPE LI+T
Sbjct: 260 DRPEHLILT 268


>XP_002502032.1 predicted protein [Micromonas commoda] ACO63290.1 predicted protein
           [Micromonas commoda]
          Length = 1479

 Score =  268 bits (684), Expect = 2e-78
 Identities = 128/249 (51%), Positives = 176/249 (70%), Gaps = 1/249 (0%)
 Frame = +3

Query: 48  INFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDTH 227
           + F+K PF E   PRKI+SV F+ MS  EI K    HV+E +L+  P R P  +GILD  
Sbjct: 20  LEFSKAPFNELNAPRKIRSVRFSLMSPQEIGKCGVFHVFERNLYQMPQRVPLKNGILDPR 79

Query: 228 LGTSYKIG-QCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLF 404
           +GT+ K G +CATC GK  DC GH+GY+KL LPVFH+GYFKNI+ ILQ +CK C+RV+L 
Sbjct: 80  MGTTDKKGTECATCKGKLIDCAGHFGYVKLELPVFHIGYFKNIIAILQQVCKECSRVMLP 139

Query: 405 EDDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRITHE 584
           E++R+ +L+R RNPR E++ KRAL K + DKCKR + CP CG  NG VK+  ++L+I HE
Sbjct: 140 EEERQQYLKRFRNPRLEIVPKRALSKKLADKCKRCRICPSCGAANGAVKRTGASLKIVHE 199

Query: 585 KYSKAEDIRSEYLTEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVLYLH 764
           KYSK  ++   Y+ EF EAV+ + +LKA L R+QDDL P++V ++ +K+   DC++L + 
Sbjct: 200 KYSKNPELMEAYVKEFEEAVKHNDQLKANLARVQDDLNPIRVESILSKISPMDCELLDVA 259

Query: 765 GRPEKLIVT 791
            RPE LI+T
Sbjct: 260 DRPEHLILT 268


>XP_008813807.1 PREDICTED: DNA-directed RNA polymerase III subunit 1-like [Phoenix
           dactylifera] XP_017702432.1 PREDICTED: DNA-directed RNA
           polymerase III subunit 1-like [Phoenix dactylifera]
          Length = 338

 Score =  242 bits (617), Expect = 1e-75
 Identities = 126/245 (51%), Positives = 169/245 (68%)
 Frame = +3

Query: 57  TKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDTHLGT 236
           TK+P+IED GPRKIKS+ F+T SG +I K AE+ V+   ++   + KP  +G+LD  +G 
Sbjct: 9   TKEPYIEDVGPRKIKSIRFSTFSGEDIRKLAEVQVWNNRIYDL-NLKPIENGLLDPRMGA 67

Query: 237 SYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLFEDDR 416
             +  +CATC+G F+DCPGH+GY+KL LPVF+VGYF +ILNIL+CICK C R+LL E  R
Sbjct: 68  PNRQTECATCHGNFTDCPGHFGYLKLILPVFNVGYFNSILNILKCICKGCGRILLDETLR 127

Query: 417 KLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRITHEKYSK 596
           K +L++MRNP+A++LQK AL K I DKCK   RC RCG  NG VKK  S L    + +SK
Sbjct: 128 KTYLKKMRNPKADILQKNALMKIIRDKCKPC-RCLRCGYANGVVKKARSGLYFIQD-FSK 185

Query: 597 AEDIRSEYLTEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVLYLHGRPE 776
             D   E   EF  A+   K+  +F  ++   L+ + VL+LF KM+DEDC++L L+ RPE
Sbjct: 186 TADPSVE---EFRSALSHTKDKTSF--QVSHVLSAVAVLSLFRKMLDEDCELLNLYDRPE 240

Query: 777 KLIVT 791
           KLIVT
Sbjct: 241 KLIVT 245


>ONM16387.1 DNA-directed RNA polymerase III subunit 1 [Zea mays]
          Length = 533

 Score =  242 bits (618), Expect = 2e-73
 Identities = 127/252 (50%), Positives = 173/252 (68%)
 Frame = +3

Query: 36  PTVSINFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGI 215
           P   +  TK+PFIED G R+IKS+ F+ +SG+EI K+AE+ V+   ++   D  P P+G+
Sbjct: 4   PEEKLRCTKEPFIEDVGTRRIKSIRFSVLSGSEIRKSAEVQVWNNRIYD-RDMTPVPNGL 62

Query: 216 LDTHLGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARV 395
           LD  +G   K G+C TC+G+FSDCPGH+GY+KLALPVF+VG+F  IL++L+CICKSC+RV
Sbjct: 63  LDPRMGIPTKRGKCNTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCSRV 122

Query: 396 LLFEDDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRI 575
           LL E DR+ FL++MRNPRA+ LQK A  K + DKCK +  CPRC   NG VKK  + L +
Sbjct: 123 LLIEKDRREFLKKMRNPRADALQKSATMKKVRDKCK-LSCCPRCDYRNGVVKKGRAGLIV 181

Query: 576 THEKYSKAEDIRSEYLTEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVL 755
            H+  SK  D  +E   E   A++  KE  +  + +   L P  VL+LF +M+DEDC++L
Sbjct: 182 VHD-CSKVLDGHTE---ELKNALQNKKEKVSASSVLV--LDPATVLSLFRRMIDEDCELL 235

Query: 756 YLHGRPEKLIVT 791
            L  RPEKLIVT
Sbjct: 236 NLGDRPEKLIVT 247


>CDP06311.1 unnamed protein product [Coffea canephora]
          Length = 312

 Score =  233 bits (593), Expect = 2e-72
 Identities = 115/254 (45%), Positives = 164/254 (64%), Gaps = 6/254 (2%)
 Frame = +3

Query: 48  INFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDTH 227
           I FTKQP+IED GPRKI+S+ F+T   +EI+KAAE+ VY   ++    +KP  +G+LD H
Sbjct: 9   IQFTKQPYIEDVGPRKIESIQFSTFGESEILKAAEVQVYR-GVYYDSAKKPWENGLLDPH 67

Query: 228 LGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLFE 407
           +G + K G C TC+G F +CPGHYGY+ LALPV++VGY   +L+IL+CICK C+ VLL E
Sbjct: 68  MGPANKNGICETCHGNFRECPGHYGYLTLALPVYNVGYLITVLDILKCICKQCSHVLLGE 127

Query: 408 DDRKLFLRRMRNPRAEVLQKRALFKSINDKC------KRVQRCPRCGDYNGTVKKLTSTL 569
            +R  FL++MRNP+ E L+K  L K +  +C      ++   C RCG  NG VKK T  L
Sbjct: 128 KERLNFLKKMRNPKMEPLRKSELQKMVVKRCNALASSRKAATCSRCGYVNGMVKKNTKML 187

Query: 570 RITHEKYSKAEDIRSEYLTEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCD 749
            I HE+      +   +L E+  A+   KE       + D++ P  V +L  +M+DEDC+
Sbjct: 188 GIMHER----TKVNDSFLNEYGSAISHTKESNTSNFSVPDEIDPKVVYSLLKRMLDEDCE 243

Query: 750 VLYLHGRPEKLIVT 791
           +LYL+ RPEKL+++
Sbjct: 244 LLYLNDRPEKLMIS 257


>XP_018682186.1 PREDICTED: DNA-directed RNA polymerase III subunit 1 [Musa
           acuminata subsp. malaccensis] XP_018682187.1 PREDICTED:
           DNA-directed RNA polymerase III subunit 1 [Musa
           acuminata subsp. malaccensis]
          Length = 1372

 Score =  249 bits (637), Expect = 3e-72
 Identities = 122/245 (49%), Positives = 175/245 (71%)
 Frame = +3

Query: 57  TKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDTHLGT 236
           TK+P+IED GP++IKS+ F+T SG EI K AE+ V+   ++   D +P  +G+LD  +G 
Sbjct: 11  TKEPYIEDVGPQRIKSIRFSTFSGEEIKKLAEVQVWNNRIYGI-DLRPVENGLLDPKMGA 69

Query: 237 SYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLFEDDR 416
           + K G CATC+G F++CPGH+GY+KL LPVF+VG+F +ILN+L+CICK+CAR+LL E+DR
Sbjct: 70  ANKAGVCATCHGNFTECPGHFGYLKLTLPVFNVGFFNSILNVLKCICKACARILLLENDR 129

Query: 417 KLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRITHEKYSK 596
           ++FL++MRNP+A++  K AL K I DKCK +  CP CG  NG VKK  S+  I H+ +S+
Sbjct: 130 RIFLKKMRNPKADIFMKNALMKKIRDKCK-ISICPWCGSRNGVVKKARSSFAIAHD-FSR 187

Query: 597 AEDIRSEYLTEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVLYLHGRPE 776
           + D   E +     A+   K   +F  +I   L+P+ VL+LF +MVDEDC++L L+ RP+
Sbjct: 188 SVD---ESIEVVRAALSHIKAKSSF--QIVHVLSPVTVLSLFKRMVDEDCELLNLYDRPD 242

Query: 777 KLIVT 791
           KLIVT
Sbjct: 243 KLIVT 247


>JAT40403.1 DNA-directed RNA polymerase III subunit RPC1 [Anthurium amnicola]
          Length = 1376

 Score =  249 bits (637), Expect = 3e-72
 Identities = 132/248 (53%), Positives = 172/248 (69%)
 Frame = +3

Query: 48  INFTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDTH 227
           + FTK+ + ED GPRKIKS+ F+T SG EI K+AE+ V+    F   + KP  HG+LD  
Sbjct: 8   VRFTKELYSEDIGPRKIKSIRFSTFSGEEIRKSAEVQVWNNR-FYDANVKPVEHGLLDLR 66

Query: 228 LGTSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLFE 407
           +G   K+G CATC+G FSDCPGH+G++KL LPVF++GYF +ILNIL+CICKSCAR+LL E
Sbjct: 67  MGPGSKMGFCATCHGSFSDCPGHFGFLKLTLPVFNIGYFNSILNILKCICKSCARILLPE 126

Query: 408 DDRKLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRITHEK 587
            +RK +L++MRNPR+++ QK A  K+I DKCK   RC RCG  NG VKK  S+L I  + 
Sbjct: 127 KERKEYLKKMRNPRSDISQKNAYVKAIRDKCK-ASRCVRCGYINGVVKKGQSSLGIVQD- 184

Query: 588 YSKAEDIRSEYLTEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVLYLHG 767
           ++K  D   E L EF  A+   K+ + F  R    L+  +VL LF  MVDEDC+VL+L  
Sbjct: 185 FTKVHD---ESLEEFHSALSHIKDKERF--RRTHVLSSDRVLTLFKSMVDEDCEVLHLAD 239

Query: 768 RPEKLIVT 791
           RPEKLIVT
Sbjct: 240 RPEKLIVT 247


>XP_020113846.1 DNA-directed RNA polymerase III subunit 1 isoform X4 [Ananas
           comosus]
          Length = 1163

 Score =  248 bits (632), Expect = 9e-72
 Identities = 127/245 (51%), Positives = 176/245 (71%)
 Frame = +3

Query: 57  TKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDTHLGT 236
           TK+P+IED G RKIKS+ FTT+S  EI K+AE+ V+   ++   D +P  +G+LD  +G+
Sbjct: 11  TKEPYIEDVGSRKIKSIRFTTLSSEEIRKSAEVQVWNNRIYG-NDLQPVENGLLDRRMGS 69

Query: 237 SYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLFEDDR 416
           + K  QCATC+GKF++CPGH+GY+KL LPVF+VGYF +IL+IL+CICK+C+R+LL E+DR
Sbjct: 70  ANKKIQCATCHGKFTECPGHFGYLKLTLPVFNVGYFSSILDILKCICKTCSRILLPEEDR 129

Query: 417 KLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRITHEKYSK 596
           + FLR+MRNP+A+ LQK AL K I DKCK + RCPRCG  NG VKK  + L I  + ++K
Sbjct: 130 REFLRKMRNPKADALQKNALLKKIRDKCK-MFRCPRCGSSNGVVKKARTGLAIA-QHFTK 187

Query: 597 AEDIRSEYLTEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVLYLHGRPE 776
           + D  +E   E   A+   K+ ++F  +    +TP     LF +M+DEDC+VL L+ RPE
Sbjct: 188 SVDESAE---EIRSALSHKKDKQSF--QAAHVITPGAAFALFKRMLDEDCEVLNLYDRPE 242

Query: 777 KLIVT 791
           KLIVT
Sbjct: 243 KLIVT 247


>XP_010265589.1 PREDICTED: DNA-directed RNA polymerase III subunit 1 [Nelumbo
           nucifera]
          Length = 1392

 Score =  248 bits (633), Expect = 1e-71
 Identities = 133/258 (51%), Positives = 176/258 (68%), Gaps = 12/258 (4%)
 Frame = +3

Query: 54  FTKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDTHLG 233
           FTK+P+IED GPRKIKS+ F+  SG EI KAAE+ V+  S++   +RKP   G+LD+ +G
Sbjct: 10  FTKEPYIEDVGPRKIKSIRFSMFSGDEIRKAAEVQVWR-SVYYDVNRKPIDDGLLDSRMG 68

Query: 234 TSYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLFEDD 413
            + K G C TC+G F+DCPGH+GY+ LALPVF+VGYF  IL+IL+CICKSCAR+LL E+ 
Sbjct: 69  PASKSGICTTCDGSFTDCPGHFGYLNLALPVFNVGYFSTILDILKCICKSCARILLEEEK 128

Query: 414 RKLFLRRMRNPRAEVLQKRALFKSINDKC------KRVQRCPRCGDYNGTVKK------L 557
           RK +L++MR+ +A+ LQK  L K I  KC      K+  +C RCG  NG VKK       
Sbjct: 129 RKDYLKKMRSSKADALQKNNLMKQIVKKCTTMLSSKKALKCTRCGYINGFVKKGASISGT 188

Query: 558 TSTLRITHEKYSKAEDIRSEYLTEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVD 737
            STL I H++ SK  D   E L E + A+   KE KA   R+   L P+++L LF +MVD
Sbjct: 189 GSTLGIVHDR-SKVND---ESLEECSSAISHKKESKASF-RVVHVLNPVRILALFKRMVD 243

Query: 738 EDCDVLYLHGRPEKLIVT 791
           EDC++LYL+ RPEKLI+T
Sbjct: 244 EDCELLYLYDRPEKLIIT 261


>XP_020113845.1 DNA-directed RNA polymerase III subunit 1 isoform X3 [Ananas
           comosus]
          Length = 1377

 Score =  248 bits (632), Expect = 2e-71
 Identities = 127/245 (51%), Positives = 176/245 (71%)
 Frame = +3

Query: 57  TKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDTHLGT 236
           TK+P+IED G RKIKS+ FTT+S  EI K+AE+ V+   ++   D +P  +G+LD  +G+
Sbjct: 11  TKEPYIEDVGSRKIKSIRFTTLSSEEIRKSAEVQVWNNRIYG-NDLQPVENGLLDRRMGS 69

Query: 237 SYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLFEDDR 416
           + K  QCATC+GKF++CPGH+GY+KL LPVF+VGYF +IL+IL+CICK+C+R+LL E+DR
Sbjct: 70  ANKKIQCATCHGKFTECPGHFGYLKLTLPVFNVGYFSSILDILKCICKTCSRILLPEEDR 129

Query: 417 KLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRITHEKYSK 596
           + FLR+MRNP+A+ LQK AL K I DKCK + RCPRCG  NG VKK  + L I  + ++K
Sbjct: 130 REFLRKMRNPKADALQKNALLKKIRDKCK-MFRCPRCGSSNGVVKKARTGLAIA-QHFTK 187

Query: 597 AEDIRSEYLTEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVLYLHGRPE 776
           + D  +E   E   A+   K+ ++F  +    +TP     LF +M+DEDC+VL L+ RPE
Sbjct: 188 SVDESAE---EIRSALSHKKDKQSF--QAAHVITPGAAFALFKRMLDEDCEVLNLYDRPE 242

Query: 777 KLIVT 791
           KLIVT
Sbjct: 243 KLIVT 247


>XP_020113843.1 DNA-directed RNA polymerase III subunit 1 isoform X1 [Ananas
           comosus]
          Length = 1377

 Score =  248 bits (632), Expect = 2e-71
 Identities = 127/245 (51%), Positives = 176/245 (71%)
 Frame = +3

Query: 57  TKQPFIEDAGPRKIKSVAFTTMSGAEIVKAAELHVYETSLFMFPDRKPCPHGILDTHLGT 236
           TK+P+IED G RKIKS+ FTT+S  EI K+AE+ V+   ++   D +P  +G+LD  +G+
Sbjct: 11  TKEPYIEDVGSRKIKSIRFTTLSSEEIRKSAEVQVWNNRIYG-NDLQPVENGLLDRRMGS 69

Query: 237 SYKIGQCATCNGKFSDCPGHYGYIKLALPVFHVGYFKNILNILQCICKSCARVLLFEDDR 416
           + K  QCATC+GKF++CPGH+GY+KL LPVF+VGYF +IL+IL+CICK+C+R+LL E+DR
Sbjct: 70  ANKKIQCATCHGKFTECPGHFGYLKLTLPVFNVGYFSSILDILKCICKTCSRILLPEEDR 129

Query: 417 KLFLRRMRNPRAEVLQKRALFKSINDKCKRVQRCPRCGDYNGTVKKLTSTLRITHEKYSK 596
           + FLR+MRNP+A+ LQK AL K I DKCK + RCPRCG  NG VKK  + L I  + ++K
Sbjct: 130 REFLRKMRNPKADALQKNALLKKIRDKCK-MFRCPRCGSSNGVVKKARTGLAIA-QHFTK 187

Query: 597 AEDIRSEYLTEFAEAVRQDKELKAFLNRIQDDLTPLKVLNLFTKMVDEDCDVLYLHGRPE 776
           + D  +E   E   A+   K+ ++F  +    +TP     LF +M+DEDC+VL L+ RPE
Sbjct: 188 SVDESAE---EIRSALSHKKDKQSF--QAAHVITPGAAFALFKRMLDEDCEVLNLYDRPE 242

Query: 777 KLIVT 791
           KLIVT
Sbjct: 243 KLIVT 247