BLASTX nr result
ID: Ephedra29_contig00017604
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00017604
(1149 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_002977127.1 hypothetical protein SELMODRAFT_443461 [Selaginel... 473 e-152
OAE22698.1 hypothetical protein AXG93_2675s1320 [Marchantia poly... 452 e-146
XP_001755844.1 predicted protein [Physcomitrella patens] EDQ7951... 442 e-143
GAQ79190.1 DNA-directed RNA polymerase III subunit 2 [Klebsormid... 438 e-140
JAT71804.1 hypothetical protein g.54477, partial [Auxenochlorell... 422 e-139
XP_002992124.1 hypothetical protein SELMODRAFT_430375 [Selaginel... 438 e-138
XP_002508452.1 predicted protein [Micromonas commoda] ACO69710.1... 429 e-137
XP_003062804.1 predicted protein [Micromonas pusilla CCMP1545] E... 427 e-136
XP_011397173.1 DNA-directed RNA polymerase III subunit RPC2 [Aux... 422 e-135
XP_001416013.1 predicted protein [Ostreococcus lucimarinus CCE99... 422 e-134
XP_011625560.1 PREDICTED: DNA-directed RNA polymerase III subuni... 416 e-132
CEF96902.1 RNA polymerase, beta subunit, conserved site [Ostreoc... 415 e-132
KDO46564.1 hypothetical protein CISIN_1g0010921mg, partial [Citr... 383 e-129
XP_009385728.1 PREDICTED: DNA-directed RNA polymerase III subuni... 406 e-128
XP_010905752.1 PREDICTED: DNA-directed RNA polymerase III subuni... 404 e-128
XP_005651194.1 DNA-directed RNA polymerase III, subunit 2 [Cocco... 402 e-127
XP_003074664.1 RNA polymerase III subunit RPC2 (ISS) [Ostreococc... 412 e-126
XP_016714181.1 PREDICTED: DNA-directed RNA polymerase III subuni... 381 e-126
XP_020112552.1 DNA-directed RNA polymerase III subunit 2 [Ananas... 399 e-126
JAT57886.1 DNA-directed RNA polymerase III subunit RPC2 [Anthuri... 399 e-126
>XP_002977127.1 hypothetical protein SELMODRAFT_443461 [Selaginella moellendorffii]
EFJ21736.1 hypothetical protein SELMODRAFT_443461
[Selaginella moellendorffii]
Length = 1386
Score = 473 bits (1216), Expect = e-152
Identities = 249/393 (63%), Positives = 293/393 (74%), Gaps = 23/393 (5%)
Frame = -2
Query: 1112 VFLYNEVGKYKIF----VRHNNCWQKSF-STMEDDEVDYENERNLAAPVKTAVDKFQLLP 948
+ LY E + KI H N +KSF D + + L APVKTAVDKFQLLP
Sbjct: 206 ICLYKEEEEEKITNPSPQHHKNTMRKSFFQEPRDYLLTRRSYAGLDAPVKTAVDKFQLLP 265
Query: 947 AFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNFYLKY------------ 804
AF KVRGLVKQH+DS+N+FVN EIKKIIHAK NEK+ S+ +PNFY+KY
Sbjct: 266 AFHKVRGLVKQHLDSYNYFVNCEIKKIIHAKGNEKITSDVDPNFYIKYACDTFQYFTNIL 325
Query: 803 ---LDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKGK---G 642
LDI V P +E+D + + TP QCRLRDMTY+API VD+EYTRG +I+ RKGK G
Sbjct: 326 FRFLDIFVGTPSIEQDYIRQDITPQQCRLRDMTYSAPISVDIEYTRGKDIITRKGKDGQG 385
Query: 641 AITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRI 462
A IGR+P+MLRS +CILTGKS+ ELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRI
Sbjct: 386 AQVIGRMPVMLRSSRCILTGKSDAELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRI 445
Query: 461 LIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESDQ 282
+ID+DS G THE+KSKT II+KHE Y+KLN F++DVPIV+V+KAMG+ESDQ
Sbjct: 446 IIDSDSTGSVTASVTSSTHERKSKTNIIIKHEKIYVKLNVFSDDVPIVVVMKAMGMESDQ 505
Query: 281 EFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKVDEA 102
E +QMVG DP+F GILAPS+Q CAS G+YT ALEYLGTKV+ R K +SKVDEA
Sbjct: 506 EIIQMVGTDPKFAGILAPSMQECASLGVYTTHQALEYLGTKVRVNRQWGSKQTKSKVDEA 565
Query: 101 RDILHNVFLANVPVHKFDFRPKCIYVAVMLRRM 3
RDIL NVFLA+V VH++DFRPKCIYVA+MLRRM
Sbjct: 566 RDILLNVFLAHVAVHRYDFRPKCIYVALMLRRM 598
>OAE22698.1 hypothetical protein AXG93_2675s1320 [Marchantia polymorpha subsp.
polymorpha]
Length = 1203
Score = 452 bits (1164), Expect = e-146
Identities = 231/349 (66%), Positives = 275/349 (78%), Gaps = 7/349 (2%)
Frame = -2
Query: 1028 DDEVDYENE----RNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIH 861
D V +E E ++L P+++ VDKF LLPAFLKV+GLVKQHIDSFN+ +N EIKKIIH
Sbjct: 37 DPRVAFEKELYGGKHLEVPLRSTVDKFALLPAFLKVKGLVKQHIDSFNYLINCEIKKIIH 96
Query: 860 AKANEKVISENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEY 681
AKANEK+ S+ +PNFYLK+ DI V +PC+E+D + + TPHQCRLRDMTYAAPI VDVEY
Sbjct: 97 AKANEKITSDVDPNFYLKFTDIFVGKPCVEQDYIVEDITPHQCRLRDMTYAAPISVDVEY 156
Query: 680 TRGNEIVVRKGK---GAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKG 510
TRG EIVVRKGK GA+ IGR+P+MLRS +C+L GK+E ELAKLGECPLDPGGYFVVKG
Sbjct: 157 TRGKEIVVRKGKDGQGALVIGRMPLMLRSSRCVLYGKNEAELAKLGECPLDPGGYFVVKG 216
Query: 509 TEKVILIQEQLSKNRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTED 330
TEKVILIQEQLSKNRI+IDTDS G THE+KSKT + VKHE YL+ NTF +D
Sbjct: 217 TEKVILIQEQLSKNRIIIDTDSHGNVAASVTSSTHERKSKTNLAVKHEKIYLRHNTFGDD 276
Query: 329 VPIVIVVKAMGIESDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKS 150
+PIVIV+KAMG+E+DQE VQMVGRDP++ GILAPS+Q C S IY+++ ALEYLG
Sbjct: 277 IPIVIVLKAMGVENDQEIVQMVGRDPKYAGILAPSMQECVSLSIYSQQQALEYLG----- 331
Query: 149 MRFGNEKSERSKVDEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRM 3
SKVDEARDIL NV LA+VPV ++DFR KCIY+AVM+RRM
Sbjct: 332 ----------SKVDEARDILANVVLAHVPVIQYDFRNKCIYIAVMIRRM 370
>XP_001755844.1 predicted protein [Physcomitrella patens] EDQ79517.1 predicted
protein [Physcomitrella patens]
Length = 1135
Score = 442 bits (1138), Expect = e-143
Identities = 224/337 (66%), Positives = 267/337 (79%)
Frame = -2
Query: 1013 YENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVIS 834
+ ++ L APVKTAVDKFQLLP+FLKVRGLVKQHIDSFN+F+N EIKKIIHA+ NEKV S
Sbjct: 9 HSHKEGLEAPVKTAVDKFQLLPSFLKVRGLVKQHIDSFNYFINCEIKKIIHAQGNEKVTS 68
Query: 833 ENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVR 654
+ + NFYLKYLDI V PC+E+D ++ TP QCRLRDMTY+API VDVEYTRG E+V
Sbjct: 69 DVDANFYLKYLDIFVGEPCVEQDYIYEPITPQQCRLRDMTYSAPISVDVEYTRGKEVV-- 126
Query: 653 KGKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLS 474
G+I IGR+PIMLRS +CIL GK+E +LAK+GECPLDPGGYFVVKGTEKVILIQEQLS
Sbjct: 127 ---GSINIGRMPIMLRSSRCILAGKNEAQLAKVGECPLDPGGYFVVKGTEKVILIQEQLS 183
Query: 473 KNRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGI 294
KNRI+I TDS G THE+KSKT ++VKHE YL+ NTF +D+PIV+V++AMG+
Sbjct: 184 KNRIIITTDSSGSVAASVTSSTHERKSKTNMVVKHERIYLRHNTFGDDIPIVVVMRAMGM 243
Query: 293 ESDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSK 114
ESDQE VQMVGRDP++ GIL PSLQ CA+ IYT ALEYLG+KV +
Sbjct: 244 ESDQEIVQMVGRDPKYAGILNPSLQECAALKIYTSHQALEYLGSKV-------------R 290
Query: 113 VDEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRM 3
VDEARDIL V LA+VPVH+FDFR KCIY+AV++R+M
Sbjct: 291 VDEARDILATVVLAHVPVHQFDFRAKCIYLAVIIRKM 327
>GAQ79190.1 DNA-directed RNA polymerase III subunit 2 [Klebsormidium flaccidum]
Length = 1269
Score = 438 bits (1127), Expect = e-140
Identities = 223/352 (63%), Positives = 278/352 (78%), Gaps = 3/352 (0%)
Frame = -2
Query: 1049 KSFSTMEDDEVDYENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKK 870
++ S E + V Y+ ++ L P+K+AVDKF+LLPAFLKVRGLVKQHIDSFN+ +N E+K
Sbjct: 116 RAASDKELERVLYDPQK-LTQPIKSAVDKFELLPAFLKVRGLVKQHIDSFNYLINCELKN 174
Query: 869 IIHAKANEKVISENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVD 690
II AKAN KV + +PNF+L+Y DI V +PC+E DL+ TP +CRLRDMTYAAPI VD
Sbjct: 175 IIRAKANVKVTCDTDPNFFLRYTDIYVGKPCIEVDLIQEGITPQKCRLRDMTYAAPISVD 234
Query: 689 VEYTRGNEIVVRKGKG---AITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFV 519
VEYTRG E+VVRKGKG AI IGR+P+MLRS +C+L K+E ELA+LGECPLDPGGYFV
Sbjct: 235 VEYTRGKELVVRKGKGGQGAIVIGRMPLMLRSSRCVLKDKNEEELAELGECPLDPGGYFV 294
Query: 518 VKGTEKVILIQEQLSKNRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTF 339
V+GTEKVILIQEQLSKNRI+IDTD+ G THE+KSKT IIVK+ +L+ NTF
Sbjct: 295 VRGTEKVILIQEQLSKNRIIIDTDNNGNVMASVTSSTHERKSKTNIIVKNTRIFLRHNTF 354
Query: 338 TEDVPIVIVVKAMGIESDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTK 159
++VPIV+V+KAMG+ SDQE VQMVG DP + +LAPS+Q CA+ GI+T++ ALEY G K
Sbjct: 355 GDEVPIVVVLKAMGMASDQEIVQMVGMDPVYADLLAPSIQECAALGIFTQQQALEYCGAK 414
Query: 158 VKSMRFGNEKSERSKVDEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRM 3
VK+ R K++R KVDEARDIL NV LA+VPV++FDF+ KCIY+ VM+RRM
Sbjct: 415 VKTGRQMWVKTKRHKVDEARDILSNVVLAHVPVNRFDFKGKCIYIGVMIRRM 466
>JAT71804.1 hypothetical protein g.54477, partial [Auxenochlorella
protothecoides]
Length = 715
Score = 422 bits (1086), Expect = e-139
Identities = 213/353 (60%), Positives = 273/353 (77%), Gaps = 7/353 (1%)
Frame = -2
Query: 1040 STMEDDEVDYENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIH 861
S + D +D + L P+K DK+QLLPAFL+VRGLV+QHIDSFN+F+NHE+KKIIH
Sbjct: 19 SVLGDAGIDDCDPAKLTQPIKEVKDKYQLLPAFLRVRGLVRQHIDSFNYFINHEMKKIIH 78
Query: 860 AKANEKVISENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEY 681
AK NE+V + +PNFYLKYL+I V +P +EE+ + + +P QCRLRDMTY+API VDVEY
Sbjct: 79 AKGNERVTCDTDPNFYLKYLNIYVGKPSIEEEYIVTDISPQQCRLRDMTYSAPISVDVEY 138
Query: 680 TRGNEIVVRKGK---GAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKG 510
TRG EIV+++GK GA+ +GR+P+MLRS +C+L GKSE ELAKLGECPLDPGGYFVVKG
Sbjct: 139 TRGKEIVMKRGKNGQGALFLGRMPLMLRSDRCVLKGKSEAELAKLGECPLDPGGYFVVKG 198
Query: 509 TEKVILIQEQLSKNRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTED 330
TEKVILIQEQLSKNRI+IDTDS G THE+KSKT I+ KH L+ N FTED
Sbjct: 199 TEKVILIQEQLSKNRIIIDTDSHGGIVASVTSSTHERKSKTNIVTKHGRLLLRHNAFTED 258
Query: 329 VPIVIVVKAMGIESDQEFVQMVGRDPRFGGILAPSLQNC--ASYGIYTKELALEYLGTKV 156
+ I+ V++AMG+ESDQEFVQ+VG +P FG +LAP+LQ+C S G++T+ ALE+L +V
Sbjct: 259 INILAVLRAMGVESDQEFVQLVGSEPAFGSLLAPTLQHCREESTGVFTQAQALEFLAARV 318
Query: 155 KSMR--FGNEKSERSKVDEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRM 3
KS R G ++ RS+VDEARDIL V L +VPV +++F+ K +Y+AVM+RRM
Sbjct: 319 KSSRPPGGFQRRGRSRVDEARDILSGVVLCHVPVPRYNFQAKVVYLAVMVRRM 371
>XP_002992124.1 hypothetical protein SELMODRAFT_430375 [Selaginella moellendorffii]
EFJ06779.1 hypothetical protein SELMODRAFT_430375
[Selaginella moellendorffii]
Length = 1440
Score = 438 bits (1126), Expect = e-138
Identities = 238/394 (60%), Positives = 281/394 (71%), Gaps = 24/394 (6%)
Frame = -2
Query: 1112 VFLYNEVGKYKIF----VRHNNCWQKSF-STMEDDEVDYENERNLAAPVKTAVDKFQLLP 948
+ LY E + KI H N +KSF D + + L APVKTAVDKFQLLP
Sbjct: 266 ICLYKEEEEEKITNPSPQHHKNTMRKSFFQEPRDYLLTRRSYAGLDAPVKTAVDKFQLLP 325
Query: 947 AFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNFYLKY------------ 804
AF KVRGLVKQH+DS+N+FVN EIKKIIHAK NEK+ S+ +PNFY+KY
Sbjct: 326 AFHKVRGLVKQHLDSYNYFVNCEIKKIIHAKGNEKITSDVDPNFYIKYACDTFFQYFTNI 385
Query: 803 ----LDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKGK--- 645
LDI V P +E+D + + TP QCRLRDMTY+API VD+EYTRG +I+ RKGK
Sbjct: 386 LFRFLDIFVGTPSIEQDYIRQDITPQQCRLRDMTYSAPISVDIEYTRGKDIITRKGKDGQ 445
Query: 644 GAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNR 465
GA IGR+P+MLRS +CILTGKS+ ELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNR
Sbjct: 446 GAQVIGRMPVMLRSSRCILTGKSDAELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNR 505
Query: 464 ILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESD 285
I+ID+DS G ++ + H KLN F++DVPIV+V+KAMG+ESD
Sbjct: 506 IIIDSDSTG----------------SLSLAVH--MRGKLNVFSDDVPIVVVMKAMGMESD 547
Query: 284 QEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKVDE 105
QE +QMVG DP+F GILAPS+Q CAS G+YT ALEYLGTKV+ R K +SKVDE
Sbjct: 548 QEIIQMVGTDPKFAGILAPSMQECASLGVYTTHQALEYLGTKVRVNRQWGSKQTKSKVDE 607
Query: 104 ARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRM 3
ARDIL NVFLA+V VHK+DFRPKCIYVA+MLRRM
Sbjct: 608 ARDILLNVFLAHVAVHKYDFRPKCIYVALMLRRM 641
>XP_002508452.1 predicted protein [Micromonas commoda] ACO69710.1 predicted protein
[Micromonas commoda]
Length = 1159
Score = 429 bits (1103), Expect = e-137
Identities = 216/335 (64%), Positives = 264/335 (78%), Gaps = 4/335 (1%)
Frame = -2
Query: 995 LAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNF 816
L AP+KT DKF+LLPAFLKVRGLV+QHIDSFN+ +N EIKKII AKANEKV + +PNF
Sbjct: 30 LNAPIKTLKDKFELLPAFLKVRGLVRQHIDSFNYLINEEIKKIIAAKANEKVTCDTDPNF 89
Query: 815 YLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVV---RKGK 645
YLKY +I+V +P +EED + E TP QCRLRDMTYAAP+ VDVEYTRG EIV + G
Sbjct: 90 YLKYTNIQVGKPSVEEDFIVEEITPQQCRLRDMTYAAPVTVDVEYTRGKEIVTNTSKNGV 149
Query: 644 GAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNR 465
G +TIGR+P+MLRS +CILTGKSE ELA+LGECPLDPGGYFVVKGTEKVILIQEQLSKNR
Sbjct: 150 GGVTIGRIPLMLRSSRCILTGKSEEELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNR 209
Query: 464 ILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESD 285
I+ID D+KG THE+KSKT I+VKH YL+ NTFT+++PI++ +KAMG ESD
Sbjct: 210 IIIDIDNKGEVGASVTSSTHERKSKTNIVVKHGKLYLRHNTFTDEIPIMVALKAMGCESD 269
Query: 284 QEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVK-SMRFGNEKSERSKVD 108
QE VQMVG D + +L PSL C++ I+T++ ALEY G KV+ + R +++RSKVD
Sbjct: 270 QEVVQMVGPDTAYASLLLPSLLECSALAIFTQQQALEYCGGKVRMATRMMYSRNKRSKVD 329
Query: 107 EARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRM 3
EARDIL V LA+VPV +DFR KC+YVA+M+RR+
Sbjct: 330 EARDILAGVVLAHVPVPAYDFRQKCVYVAIMIRRI 364
>XP_003062804.1 predicted protein [Micromonas pusilla CCMP1545] EEH52743.1 predicted
protein [Micromonas pusilla CCMP1545]
Length = 1197
Score = 427 bits (1097), Expect = e-136
Identities = 215/339 (63%), Positives = 263/339 (77%), Gaps = 8/339 (2%)
Frame = -2
Query: 995 LAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNF 816
LAAPV T DKF+LLPAFLKVRGLV+QHIDSFN+ +N EI+KII AKANE+V + +P+F
Sbjct: 64 LAAPVNTLEDKFELLPAFLKVRGLVRQHIDSFNYLINEEIRKIIRAKANERVTCDTDPSF 123
Query: 815 YLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRK----G 648
YL+Y +I V +PC+EED + + TP QCRLRDMTYAAP+ VD EYTRG EIV RK G
Sbjct: 124 YLRYTNIHVGKPCVEEDYIVEDITPQQCRLRDMTYAAPVTVDAEYTRGKEIVTRKTNEQG 183
Query: 647 KGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKN 468
G ITIGR+P+MLRS +C+LTGKSE ELA+LGECPLDPGGYFVVKG EKV+LIQEQLSKN
Sbjct: 184 VGGITIGRIPLMLRSSRCVLTGKSEDELARLGECPLDPGGYFVVKGVEKVVLIQEQLSKN 243
Query: 467 RILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIES 288
RI+ID D+KG THE+KSKT I+VKH YL+ NTF EDVPI++ +KAMG ES
Sbjct: 244 RIIIDVDAKGEIGASVTSSTHERKSKTNIVVKHGKLYLRHNTFVEDVPILVALKAMGTES 303
Query: 287 DQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSM-RFGN---EKSER 120
DQE VQ+VG DP + +L PSLQ C++ I+T++ ALEY G KV++ R G ++ R
Sbjct: 304 DQEVVQLVGPDPAYANLLIPSLQECSALAIFTQQQALEYCGAKVRTQSRMGGYQYGRNRR 363
Query: 119 SKVDEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRM 3
++VDEARDIL V LA+VPV +DFR KC YVAVM+RR+
Sbjct: 364 NRVDEARDILAGVVLAHVPVVAYDFRGKCAYVAVMIRRI 402
>XP_011397173.1 DNA-directed RNA polymerase III subunit RPC2 [Auxenochlorella
protothecoides] KFM24286.1 DNA-directed RNA polymerase
III subunit RPC2 [Auxenochlorella protothecoides]
Length = 1090
Score = 422 bits (1086), Expect = e-135
Identities = 213/353 (60%), Positives = 273/353 (77%), Gaps = 7/353 (1%)
Frame = -2
Query: 1040 STMEDDEVDYENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIH 861
S + D +D + L P+K DK+QLLPAFL+VRGLV+QHIDSFN+F+NHE+KKIIH
Sbjct: 19 SVLGDAGIDDCDPAKLTQPIKEVKDKYQLLPAFLRVRGLVRQHIDSFNYFINHEMKKIIH 78
Query: 860 AKANEKVISENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEY 681
AK NE+V + +PNFYLKYL+I V +P +EE+ + + +P QCRLRDMTY+API VDVEY
Sbjct: 79 AKGNERVTCDTDPNFYLKYLNIYVGKPSIEEEYIVTDISPQQCRLRDMTYSAPISVDVEY 138
Query: 680 TRGNEIVVRKGK---GAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKG 510
TRG EIV+++GK GA+ +GR+P+MLRS +C+L GKSE ELAKLGECPLDPGGYFVVKG
Sbjct: 139 TRGKEIVMKRGKNGQGALFLGRMPLMLRSDRCVLKGKSEAELAKLGECPLDPGGYFVVKG 198
Query: 509 TEKVILIQEQLSKNRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTED 330
TEKVILIQEQLSKNRI+IDTDS G THE+KSKT I+ KH L+ N FTED
Sbjct: 199 TEKVILIQEQLSKNRIIIDTDSHGGIVASVTSSTHERKSKTNIVTKHGRLLLRHNAFTED 258
Query: 329 VPIVIVVKAMGIESDQEFVQMVGRDPRFGGILAPSLQNC--ASYGIYTKELALEYLGTKV 156
+ I+ V++AMG+ESDQEFVQ+VG +P FG +LAP+LQ+C S G++T+ ALE+L +V
Sbjct: 259 INILAVLRAMGVESDQEFVQLVGSEPAFGSLLAPTLQHCREESTGVFTQAQALEFLAARV 318
Query: 155 KSMR--FGNEKSERSKVDEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRM 3
KS R G ++ RS+VDEARDIL V L +VPV +++F+ K +Y+AVM+RRM
Sbjct: 319 KSSRPPGGFQRRGRSRVDEARDILSGVVLCHVPVPRYNFQAKVVYLAVMVRRM 371
>XP_001416013.1 predicted protein [Ostreococcus lucimarinus CCE9901] ABO94305.1
predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1146
Score = 422 bits (1084), Expect = e-134
Identities = 210/340 (61%), Positives = 262/340 (77%), Gaps = 9/340 (2%)
Frame = -2
Query: 995 LAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNF 816
+ AP+ T DK++LLPAFLKVRGLV+QHIDSFN+ VN EIKKIIHAKANE+V +++PNF
Sbjct: 11 ITAPIATLEDKYELLPAFLKVRGLVRQHIDSFNYLVNEEIKKIIHAKANERVTCDSDPNF 70
Query: 815 YLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKGK--- 645
YLKY +I V RP +EED + E TP QCRLRDMTYAAPI VDVEYTRG EIV R+ K
Sbjct: 71 YLKYTNIHVGRPSVEEDYVVEEITPQQCRLRDMTYAAPITVDVEYTRGKEIVTRQAKNGV 130
Query: 644 GAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNR 465
G + IGR+P+MLRS +C+LTGK+E ELA+LGECPLDPGGYF+VKG EKVILIQEQLSKNR
Sbjct: 131 GGVVIGRIPLMLRSSRCVLTGKNEDELARLGECPLDPGGYFIVKGVEKVILIQEQLSKNR 190
Query: 464 ILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESD 285
I+I+ D+KG THE+KSKT I+VKH FYL+ NTF +D+PI+IV+KAMG+ESD
Sbjct: 191 IIIEVDAKGEIGASVTSSTHERKSKTNIVVKHGKFYLRHNTFADDIPIMIVLKAMGLESD 250
Query: 284 QEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVK------SMRFGNEKSE 123
QE VQM+G +P + +L P+LQ C + G++T + ALEY KV+ + R G
Sbjct: 251 QEAVQMIGSEPAYAMLLGPTLQECQAAGVFTTQQALEYCANKVRVVKTHMTNRPGVRNFG 310
Query: 122 RSKVDEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRM 3
RS+VDEARDIL V LA+VPV +DFR KC Y+++M+RR+
Sbjct: 311 RSRVDEARDILAGVVLAHVPVTSYDFRQKCAYISIMVRRI 350
>XP_011625560.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc2 [Amborella
trichopoda]
Length = 1143
Score = 416 bits (1070), Expect = e-132
Identities = 215/332 (64%), Positives = 256/332 (77%), Gaps = 2/332 (0%)
Frame = -2
Query: 992 AAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNFY 813
A PVKTAVDKFQLLP FLK+RGLVKQHIDSFN+FVN+EIKKI+HA +NE++ SE +P +
Sbjct: 11 ARPVKTAVDKFQLLPEFLKIRGLVKQHIDSFNYFVNNEIKKIVHAPSNERITSEVDPAYT 70
Query: 812 LKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEY--TRGNEIVVRKGKGA 639
LKYLD+ + P + + + + TP +CRLRDMTY+APIK VEY T+G EIV
Sbjct: 71 LKYLDVSIGTPSYDTNTVAEKVTPQECRLRDMTYSAPIKAIVEYAKTKGGEIV----HST 126
Query: 638 ITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIL 459
ITIG LPIMLRSCQC+L+GK E ELA+LGECPLDPGGYF+VKG+EKVILIQEQLSKNRI+
Sbjct: 127 ITIGYLPIMLRSCQCVLSGKDEDELAELGECPLDPGGYFIVKGSEKVILIQEQLSKNRII 186
Query: 458 IDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESDQE 279
I+TD KG T+E KSKT I++K E YLKLN F EDVPI++++KAMG+ESDQE
Sbjct: 187 IETDGKGSVVATVTSVTNETKSKTNIVLKKEKIYLKLNVFIEDVPIIVILKAMGMESDQE 246
Query: 278 FVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKVDEAR 99
VQM+GRDPRFG IL PSLQ CAS GIY + AL +L KVK R S K AR
Sbjct: 247 IVQMLGRDPRFGSILLPSLQECASLGIYMEHQALAFLELKVK--RSATANSVNGKEGRAR 304
Query: 98 DILHNVFLANVPVHKFDFRPKCIYVAVMLRRM 3
+IL +VFLA+VPV +F+FRPKCIYVAVMLRRM
Sbjct: 305 NILRDVFLAHVPVKRFNFRPKCIYVAVMLRRM 336
>CEF96902.1 RNA polymerase, beta subunit, conserved site [Ostreococcus tauri]
Length = 1176
Score = 415 bits (1066), Expect = e-132
Identities = 207/342 (60%), Positives = 263/342 (76%), Gaps = 11/342 (3%)
Frame = -2
Query: 995 LAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNF 816
+ +P+ T DKF+LLPAFLKVRGLV+QHIDSFN+ VN EIKKI+ AKANE+V +++PNF
Sbjct: 39 VTSPIGTLEDKFELLPAFLKVRGLVRQHIDSFNYLVNEEIKKIVRAKANERVTCDSDPNF 98
Query: 815 YLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRK---GK 645
YLKY +I V RP +EED + E TP QCRLRDMTYAAPI VDVEYTRG EIV R+ G
Sbjct: 99 YLKYTNIHVGRPSVEEDYVVEEITPQQCRLRDMTYAAPITVDVEYTRGKEIVTRQQKNGV 158
Query: 644 GAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNR 465
G I IGR+P+MLRS +C+LTGK+E ELA+LGECPLDPGGYF+VKG EKVILIQEQLSKNR
Sbjct: 159 GGIVIGRIPLMLRSSRCVLTGKNEEELARLGECPLDPGGYFIVKGVEKVILIQEQLSKNR 218
Query: 464 ILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESD 285
I+ID D+KG THE+KSKT I+VKH YL+ NTF +D+ I+IV+KAMG+ESD
Sbjct: 219 IIIDVDNKGEIGASVTSSTHERKSKTNIVVKHGKLYLRHNTFADDISIMIVLKAMGMESD 278
Query: 284 QEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSE------ 123
QE V M+G DP + +LAP+LQ C + GI+T + ALEY +KV+ ++ + +++
Sbjct: 279 QEAVHMIGSDPTYAMLLAPTLQECHASGIFTMQQALEYCASKVRVVKMQSPRTQIGGART 338
Query: 122 --RSKVDEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRM 3
RS++DEARDIL V LA+VPV +DFR KC Y+++M+RR+
Sbjct: 339 YGRSRIDEARDILAGVVLAHVPVVAYDFRQKCAYISIMVRRI 380
>KDO46564.1 hypothetical protein CISIN_1g0010921mg, partial [Citrus sinensis]
KDO46565.1 hypothetical protein CISIN_1g0010921mg,
partial [Citrus sinensis] KDO46566.1 hypothetical protein
CISIN_1g0010921mg, partial [Citrus sinensis] KDO46567.1
hypothetical protein CISIN_1g0010921mg, partial [Citrus
sinensis] KDO46568.1 hypothetical protein
CISIN_1g0010921mg, partial [Citrus sinensis]
Length = 361
Score = 383 bits (983), Expect = e-129
Identities = 192/336 (57%), Positives = 250/336 (74%), Gaps = 1/336 (0%)
Frame = -2
Query: 1007 NERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISEN 828
+++ LAAPVK+ VDKFQLLP FLKVRGLVKQH+DSFN+FVN I+KI+ +AN++++S
Sbjct: 17 DKQKLAAPVKSVVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIRKIV--RANDRIVSGI 74
Query: 827 NPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIV-VRK 651
+P+ +L++ D+R+ +P + D + + PH CRL DMTYAAPI V++EY +G+
Sbjct: 75 DPSIFLRFKDVRIGQPSMTVDGVSEKLNPHMCRLSDMTYAAPILVNIEYVQGSHTEKTTM 134
Query: 650 GKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSK 471
K + IGR+PIMLRSC+C+L GK E ELA+LGECPLDPGGYF++KGTEKV+LIQEQLSK
Sbjct: 135 EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 194
Query: 470 NRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIE 291
NR++IDTD KG T KSKT+I ++ YL LN F + +PI++V+KAMG+E
Sbjct: 195 NRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGME 254
Query: 290 SDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKV 111
SDQE VQMVGRDPR+ +L PS++ CA+ IYT+E ALEYL KVK FG+ ++R
Sbjct: 255 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDRE-- 312
Query: 110 DEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRM 3
A IL +VFLANVPVH +FRPKC YVAVMLRRM
Sbjct: 313 GRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRM 348
>XP_009385728.1 PREDICTED: DNA-directed RNA polymerase III subunit 2 [Musa acuminata
subsp. malaccensis]
Length = 1152
Score = 406 bits (1043), Expect = e-128
Identities = 211/348 (60%), Positives = 264/348 (75%), Gaps = 4/348 (1%)
Frame = -2
Query: 1034 MEDDEVDYENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAK 855
+ DD V + ++LAAPVK+AVDKFQLLPAFL+VRGLVKQHIDSFN+F+NH+IKKI+ K
Sbjct: 4 LPDDAV--ASTKSLAAPVKSAVDKFQLLPAFLRVRGLVKQHIDSFNYFINHDIKKIM--K 59
Query: 854 ANEKVISENNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTR 675
AN+ ++ ++P FYL+Y +I V P ++ D + TPH CRL D TYAAPIKVD+EYT+
Sbjct: 60 ANDLLVCRHDPTFYLRYTNIEVGEPSVDVDFSIEKLTPHLCRLSDRTYAAPIKVDIEYTK 119
Query: 674 GNEI-VVRKGKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKV 498
GN+ + K + IGR+PIMLRSC+C L+GK E EL+KLGECPLDPGGYFVVKGTEKV
Sbjct: 120 GNQPNKTPEVKRGLVIGRMPIMLRSCRCALSGKDEAELSKLGECPLDPGGYFVVKGTEKV 179
Query: 497 ILIQEQLSKNRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIV 318
ILIQEQLSKNRI+IDTDSKG THE KSKT+ + + YL+LN F++ +PI+
Sbjct: 180 ILIQEQLSKNRIIIDTDSKGRVTASVTSSTHETKSKTVFFMDKDKIYLQLNQFSKPIPIM 239
Query: 317 IVVKAMGIESDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKV---KSM 147
+++KAMG+ESDQE VQMVGRDPR+GG+L PS+Q CAS IYT++ AL+YL KV S
Sbjct: 240 VIMKAMGMESDQEIVQMVGRDPRYGGLLLPSIQECASERIYTQQQALDYLDGKVGSSNSA 299
Query: 146 RFGNEKSERSKVDEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRM 3
R GN K +K IL +VFLANVPV + +FRP+CIY AVMLRRM
Sbjct: 300 RAGNRKEGLAKA-----ILLDVFLANVPVFRGNFRPRCIYAAVMLRRM 342
>XP_010905752.1 PREDICTED: DNA-directed RNA polymerase III subunit 2 isoform X1
[Elaeis guineensis]
Length = 1149
Score = 404 bits (1037), Expect = e-128
Identities = 208/335 (62%), Positives = 259/335 (77%), Gaps = 4/335 (1%)
Frame = -2
Query: 995 LAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNF 816
L APVK+AVDKFQLLPAFLKVRGLVKQHIDSFN+F+NH+IKKI+ KAN++++ +P+
Sbjct: 14 LTAPVKSAVDKFQLLPAFLKVRGLVKQHIDSFNYFINHDIKKIM--KANDRLVCRYDPDL 71
Query: 815 YLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKG-KGA 639
YL+Y +I V+ P ++ D + TPH CRL D TYAAPIKVD+EYT+GN+ + K
Sbjct: 72 YLRYTNIYVEEPSVDMDFSVEKLTPHLCRLSDRTYAAPIKVDIEYTKGNQANKKPEIKRG 131
Query: 638 ITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNRIL 459
+ IGRLPIMLRSC+C+L+GK E ELAKLGECPLDPGGYF+VKGTEKVILIQEQLSKNRI+
Sbjct: 132 LVIGRLPIMLRSCRCVLSGKDEAELAKLGECPLDPGGYFIVKGTEKVILIQEQLSKNRII 191
Query: 458 IDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESDQE 279
IDTDSKG THE KSKT+ ++ + YL+LN F + +PI+++++AMG+ESDQE
Sbjct: 192 IDTDSKGRVTASVTSSTHETKSKTVFFMEKDKIYLQLNQFIKPIPIMVIMRAMGMESDQE 251
Query: 278 FVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERS---KVD 108
VQMVGRDPR+G +L PSLQ CAS IYT++ ALEYL KV GN S RS K
Sbjct: 252 IVQMVGRDPRYGTLLLPSLQECASERIYTQQQALEYLDGKV-----GNANSARSGNRKEG 306
Query: 107 EARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRM 3
A+ IL +VFLANVPV++ +F+PKCIY +VMLRRM
Sbjct: 307 LAKAILLDVFLANVPVNQGNFKPKCIYASVMLRRM 341
>XP_005651194.1 DNA-directed RNA polymerase III, subunit 2 [Coccomyxa subellipsoidea
C-169] EIE26650.1 DNA-directed RNA polymerase III,
subunit 2 [Coccomyxa subellipsoidea C-169]
Length = 1170
Score = 402 bits (1033), Expect = e-127
Identities = 206/337 (61%), Positives = 259/337 (76%), Gaps = 6/337 (1%)
Frame = -2
Query: 995 LAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNF 816
L P+K DK++LLPAFLKVRGLVKQHIDSFN+F+N EIKKI+HAK NEKV + +PNF
Sbjct: 32 LTHPIKEVADKYELLPAFLKVRGLVKQHIDSFNYFINQEIKKIVHAKGNEKVTCDTDPNF 91
Query: 815 YLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRKGK--- 645
+ KY DI V RP +EED + TP CRLRDMTYAAPI VDVEYTRG EIVVRKGK
Sbjct: 92 FFKYTDIFVGRPQVEEDYITTGITPQACRLRDMTYAAPISVDVEYTRGKEIVVRKGKNGV 151
Query: 644 GAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNR 465
GA+ IGR+P+MLRS +C+L GKSE +LA+LGECPLDPGGYFVVKG EKVILIQEQLSKNR
Sbjct: 152 GAVVIGRMPLMLRSDRCVLKGKSEAQLAELGECPLDPGGYFVVKGAEKVILIQEQLSKNR 211
Query: 464 ILIDTDSKGXXXXXXXXXTHEKKSKT-IIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIES 288
I+ID DSKG THE+KSKT I++ + L+ N FTEDV +V V++AMG+ES
Sbjct: 212 IIIDLDSKGQVTASVTSSTHERKSKTNIVLGRKGQLCLRHNAFTEDVNMVAVLRAMGVES 271
Query: 287 DQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKS--MRFGNEKSERSK 114
DQE + +VG +P +LAP+LQ + G++ ++ ALEYLG++VK+ ++ + +S RSK
Sbjct: 272 DQEILALVGCEPGLAALLAPTLQEAKAMGLFIRQQALEYLGSRVKAGKQQYSSRRS-RSK 330
Query: 113 VDEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRM 3
VDEARDIL NV + ++PV ++DF+ K IY+AVM+RRM
Sbjct: 331 VDEARDILANVVVCHIPVPQYDFQQKVIYMAVMMRRM 367
>XP_003074664.1 RNA polymerase III subunit RPC2 (ISS) [Ostreococcus tauri]
Length = 2569
Score = 412 bits (1058), Expect = e-126
Identities = 206/342 (60%), Positives = 262/342 (76%), Gaps = 11/342 (3%)
Frame = -2
Query: 995 LAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNPNF 816
+ +P+ T DKF+LLPAFLKVRGLV+QHIDSFN+ VN EIKKI+ AKANE+V +++PNF
Sbjct: 39 VTSPIGTLEDKFELLPAFLKVRGLVRQHIDSFNYLVNEEIKKIVRAKANERVTCDSDPNF 98
Query: 815 YLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRK---GK 645
YLKY +I V RP +EED + E TP QCRLRDMTYAAPI VDVEYTRG EIV R+ G
Sbjct: 99 YLKYTNIHVGRPSVEEDYVVEEITPQQCRLRDMTYAAPITVDVEYTRGKEIVTRQQKNGV 158
Query: 644 GAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNR 465
G I IGR+P+MLRS +C+LTGK+E ELA+LGECPLDPGGYF+VKG EKVILIQEQLSKNR
Sbjct: 159 GGIVIGRIPLMLRSSRCVLTGKNEEELARLGECPLDPGGYFIVKGVEKVILIQEQLSKNR 218
Query: 464 ILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESD 285
I+ID D+KG THE+KSKT I+VKH YL+ NT +D+ I+IV+KAMG+ESD
Sbjct: 219 IIIDVDNKGEIGASVTSSTHERKSKTNIVVKHGKLYLRHNTCADDIAIMIVLKAMGMESD 278
Query: 284 QEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSE------ 123
QE V M+G DP + +LAP+LQ C + GI+T + ALEY +KV+ ++ + +++
Sbjct: 279 QEAVHMIGSDPTYAMLLAPTLQECHASGIFTMQQALEYCASKVRVVKMQSPRTQIGGART 338
Query: 122 --RSKVDEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRM 3
RS++DEARDIL V LA+VPV +DFR KC Y+++M+RR+
Sbjct: 339 YGRSRIDEARDILAGVVLAHVPVVAYDFRQKCAYISIMVRRI 380
>XP_016714181.1 PREDICTED: DNA-directed RNA polymerase III subunit 2-like, partial
[Gossypium hirsutum]
Length = 501
Score = 381 bits (979), Expect = e-126
Identities = 193/336 (57%), Positives = 249/336 (74%), Gaps = 1/336 (0%)
Frame = -2
Query: 1007 NERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISEN 828
+++ LAAP+K+AVDKFQLLP FLKVRGLVKQH+DSFN+FVN IKKI+ +AN++++S+
Sbjct: 24 DKQKLAAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIV--RANDRIVSDI 81
Query: 827 NPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNE-IVVRK 651
+P+ YL++ D+R+ P + D + + PH CRL +MTYAAPI V++EY +G+ R
Sbjct: 82 DPSIYLRFKDVRIGEPSMTVDGITEKINPHACRLSEMTYAAPILVNIEYIQGSHGQKTRL 141
Query: 650 GKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSK 471
K + IGR+PIMLRSC C+L GK E ELA+LGECPLDPGGYFV+KGTEKVILIQEQLSK
Sbjct: 142 EKNDLVIGRMPIMLRSCCCVLQGKDEAELARLGECPLDPGGYFVIKGTEKVILIQEQLSK 201
Query: 470 NRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIE 291
NRI+ID D KG + KSKT+I ++ E YL LN F + +PI++V+KAMG+E
Sbjct: 202 NRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGME 261
Query: 290 SDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKV 111
SDQE VQM+GRDPRF +L PS++ CA GIYTKE AL YL TK K + + S++
Sbjct: 262 SDQEVVQMLGRDPRFSALLLPSIEECAGIGIYTKEQALAYLDTKAKRPLYASSASDQD-- 319
Query: 110 DEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRM 3
A IL +VF+ANVPV +FRPKC+YVAVMLRRM
Sbjct: 320 GRAFCILRDVFIANVPVRCNNFRPKCLYVAVMLRRM 355
>XP_020112552.1 DNA-directed RNA polymerase III subunit 2 [Ananas comosus]
Length = 1150
Score = 399 bits (1026), Expect = e-126
Identities = 202/336 (60%), Positives = 257/336 (76%)
Frame = -2
Query: 1010 ENERNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISE 831
+++R LAAPVK+AVDKFQLLPAFLKVRGLVKQHIDSFN+F+NHE+KKI+ KAN+ +++
Sbjct: 8 DSQRCLAAPVKSAVDKFQLLPAFLKVRGLVKQHIDSFNYFINHEMKKIM--KANDLLVAH 65
Query: 830 NNPNFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIVVRK 651
++PN YL+Y +I V+ P +E D + E PH CRL D TYAAP+KVD+EY++ N +
Sbjct: 66 HDPNIYLRYTNIYVESPSVEVDRVSEELKPHFCRLSDRTYAAPVKVDIEYSKANLPNKVE 125
Query: 650 GKGAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSK 471
K + IGR+PIMLRS C+L GK E +LA+LGECPLDPGGYF++KGTEKVILIQEQLSK
Sbjct: 126 YKRGVLIGRMPIMLRSSHCVLNGKDEEQLARLGECPLDPGGYFIIKGTEKVILIQEQLSK 185
Query: 470 NRILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIE 291
NRI+IDTDSKG THE KSKT++ + E YL+LN F + +PI++++KAMG+E
Sbjct: 186 NRIIIDTDSKGRVTASVTSSTHETKSKTVLFMDKEKIYLQLNQFVKPIPILVIMKAMGME 245
Query: 290 SDQEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSERSKV 111
SDQE VQM+GRDPR+G +L PSLQ CAS IYT++ ALEYL KV + + ++E K
Sbjct: 246 SDQEVVQMIGRDPRYGSLLLPSLQECASERIYTQQQALEYLDGKV--VYSSSARTETRKE 303
Query: 110 DEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRM 3
A+ IL +VFLANV V + FRPKCIY AVMLRRM
Sbjct: 304 SRAKSILLDVFLANVLVKEGKFRPKCIYTAVMLRRM 339
>JAT57886.1 DNA-directed RNA polymerase III subunit RPC2 [Anthurium amnicola]
JAT66368.1 DNA-directed RNA polymerase III subunit RPC2
[Anthurium amnicola]
Length = 1131
Score = 399 bits (1024), Expect = e-126
Identities = 203/337 (60%), Positives = 257/337 (76%), Gaps = 4/337 (1%)
Frame = -2
Query: 1001 RNLAAPVKTAVDKFQLLPAFLKVRGLVKQHIDSFNFFVNHEIKKIIHAKANEKVISENNP 822
++L APVK+ VDKFQLLPAFLKVRGLVKQHIDSFN+FVN +IKKI+ KAN+ ++ +
Sbjct: 2 KSLVAPVKSPVDKFQLLPAFLKVRGLVKQHIDSFNYFVNCDIKKIM--KANDLILCPYDS 59
Query: 821 NFYLKYLDIRVDRPCLEEDLLHVETTPHQCRLRDMTYAAPIKVDVEYTRGNEIV-VRKGK 645
+ YL+Y +I +D P ++ D + TPHQCRL D TYAAPIKVD+EYT+GN++ + K
Sbjct: 60 SLYLRYTNIYIDEPSVDLDFTKEKLTPHQCRLSDCTYAAPIKVDIEYTKGNQVSKALEQK 119
Query: 644 GAITIGRLPIMLRSCQCILTGKSETELAKLGECPLDPGGYFVVKGTEKVILIQEQLSKNR 465
+ IGR+PIMLRSC+C+L GK E ELA+LGECPLDPGGYFVVKGTEKVILIQEQLSKNR
Sbjct: 120 KGVVIGRMPIMLRSCRCVLNGKDEDELARLGECPLDPGGYFVVKGTEKVILIQEQLSKNR 179
Query: 464 ILIDTDSKGXXXXXXXXXTHEKKSKTIIIVKHEIFYLKLNTFTEDVPIVIVVKAMGIESD 285
I+IDTDSKG THE KSKT+ ++ E YL+LN F + +P+++++KAMG+ESD
Sbjct: 180 IIIDTDSKGRVTASVTSSTHETKSKTVFFMEKEKIYLQLNQFNKPIPVMVIMKAMGMESD 239
Query: 284 QEFVQMVGRDPRFGGILAPSLQNCASYGIYTKELALEYLGTKVKSMRFGNEKSE---RSK 114
QE VQMVGRDPR+G +L PS Q CA+ IYT++ AL++L +KV GN S+ R K
Sbjct: 240 QEIVQMVGRDPRYGSLLLPSSQECAAVRIYTQKQALDFLESKV-----GNPNSQNALRKK 294
Query: 113 VDEARDILHNVFLANVPVHKFDFRPKCIYVAVMLRRM 3
D A+ IL +VFLA+VP+ K + RPKCIY AVMLRRM
Sbjct: 295 GDRAKSILLDVFLAHVPITKDNLRPKCIYTAVMLRRM 331