BLASTX nr result

ID: Ephedra29_contig00017512 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00017512
         (462 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_002980975.1 hypothetical protein SELMODRAFT_420539 [Selaginel...    70   3e-11
XP_002982455.1 hypothetical protein SELMODRAFT_421846 [Selaginel...    70   3e-11
XP_001759172.1 predicted protein [Physcomitrella patens] EDQ7585...    65   2e-09

>XP_002980975.1 hypothetical protein SELMODRAFT_420539 [Selaginella moellendorffii]
           EFJ17676.1 hypothetical protein SELMODRAFT_420539
           [Selaginella moellendorffii]
          Length = 726

 Score = 70.5 bits (171), Expect = 3e-11
 Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
 Frame = +3

Query: 9   LCCHMCTGREKAVGEYLKXXXXXXXXXXXXXXXXHGEDLDIEKADDGGRKWVCPXXXXXX 188
           + CH C  R+K V + +                 HGE LD E+ ++G R WVCP      
Sbjct: 68  ITCHWC--RQKTVEDKVCCSRCPISFCGSCLANRHGEILD-EQMEEGVR-WVCPKCRGGC 123

Query: 189 XXXXXXXXXXXSKCRSL--IRGTGRLPDTARSLGFSNVHDYLVHLETGESPLQVSSRKLG 362
                        CR    +  TG L   A   GF+N HDYL+HLETGES  +++ RKLG
Sbjct: 124 GPGCVDSCCNCGPCRKAQGLAPTGVLKHGAAKSGFNNAHDYLIHLETGESVREIAQRKLG 183

Query: 363 KGWCK 377
           + W K
Sbjct: 184 RDWIK 188


>XP_002982455.1 hypothetical protein SELMODRAFT_421846 [Selaginella moellendorffii]
           EFJ16208.1 hypothetical protein SELMODRAFT_421846
           [Selaginella moellendorffii]
          Length = 728

 Score = 70.5 bits (171), Expect = 3e-11
 Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
 Frame = +3

Query: 9   LCCHMCTGREKAVGEYLKXXXXXXXXXXXXXXXXHGEDLDIEKADDGGRKWVCPXXXXXX 188
           + CH C  R+K V + +                 HGE LD E+ ++G R WVCP      
Sbjct: 71  ITCHWC--RQKTVEDKVCCSRCPISFCGSCLANRHGEILD-EQMEEGVR-WVCPKCRGGC 126

Query: 189 XXXXXXXXXXXSKCRSL--IRGTGRLPDTARSLGFSNVHDYLVHLETGESPLQVSSRKLG 362
                        CR    +  TG L   A   GF+N HDYL+HLETGES  +++ RKLG
Sbjct: 127 GPGCVDSCCNCGPCRKAQGLAPTGVLKHGAAKSGFNNAHDYLIHLETGESVREIAQRKLG 186

Query: 363 KGWCK 377
           + W K
Sbjct: 187 RDWIK 191


>XP_001759172.1 predicted protein [Physcomitrella patens] EDQ75856.1 predicted
           protein [Physcomitrella patens]
          Length = 1294

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
 Frame = +3

Query: 15  CHMCTGREKAVGEYLKXXXXXXXXXXXXXXXXHGEDLDIEKADDGGRKWVCPXXXXXXXX 194
           CH C  R+K V  ++K                +GE++  E A+  G +W+CP        
Sbjct: 635 CHWC--RQKTVEHHVKCRECTIHFCGPCLMNRNGENIREELAE--GVRWLCPKCRNGCGS 690

Query: 195 XXXXXXXXXSKCRSLI--RGTGRLPDTARSLGFSNVHDYLVHLETGESPLQVSSRKLGKG 368
                      CR       TG++   AR+ GF NVHDYLVHLETGE+ ++++ RK+G+ 
Sbjct: 691 GCNNCCNC-GPCRKADGKAPTGQVVFQARNAGFENVHDYLVHLETGETSVEIAQRKVGRD 749

Query: 369 W 371
           W
Sbjct: 750 W 750


Top