BLASTX nr result
ID: Ephedra29_contig00017501
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00017501
(1582 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_011628926.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 417 e-139
ERM96267.1 hypothetical protein AMTR_s00001p00157430 [Amborella ... 417 e-139
XP_010241330.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 410 e-136
XP_010241329.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 410 e-136
XP_010533976.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 409 e-136
XP_010241328.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 410 e-136
XP_003634352.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 406 e-135
XP_015887376.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 404 e-134
XP_016687702.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 402 e-133
XP_012444688.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 402 e-133
XP_006342081.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 401 e-133
XP_017621288.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 401 e-132
KHG01344.1 hypothetical protein F383_22314 [Gossypium arboreum] 400 e-132
XP_010320443.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 400 e-132
XP_004238386.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 400 e-132
XP_016725957.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 399 e-132
XP_016568333.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 399 e-132
XP_016568332.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 399 e-132
XP_002519370.2 PREDICTED: RNA pseudouridine synthase 2, chloropl... 398 e-131
XP_006473714.1 PREDICTED: RNA pseudouridine synthase 2, chloropl... 396 e-131
>XP_011628926.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Amborella
trichopoda]
Length = 437
Score = 417 bits (1073), Expect = e-139
Identities = 201/361 (55%), Positives = 259/361 (71%), Gaps = 3/361 (0%)
Frame = +2
Query: 233 FNDKVGEGTPKQRLDAWLSSRMEGISRARIQSSVRQGLVHVNGTSINKTSHIIRAGDIIS 412
F V G+ K+R+D+WLS+R+ +SRARIQSS+RQG V VNG I K SHI++ GD++
Sbjct: 72 FESSVAVGSKKERIDSWLSARIGDVSRARIQSSIRQGFVKVNGLPITKVSHIVKVGDMVD 131
Query: 413 CNIAPLVPLRAEPEEMQLXXXXXXXXXXXXNKPAHMVVHPAPGNPNGTLVNGILHHCGLP 592
C ++ L PL+AEPE+M L NKPAHMVVHPAPGN NGTLVNGILHHC LP
Sbjct: 132 CTVSHLQPLKAEPEDMPLDIIYEDDHVLVVNKPAHMVVHPAPGNANGTLVNGILHHCTLP 191
Query: 593 SIGCXXXXXXXXXXXXXXXEVNM---PLLDCSLESAVRPGIVHRIDKGTSGLLVIAKNEN 763
+ G + M + S++RPGIVHR+DKGTSGLLV+AKNE+
Sbjct: 192 AFGLPDGELTSESDDECDNGLTMFNPDPISTQCRSSIRPGIVHRLDKGTSGLLVVAKNEH 251
Query: 764 AHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMSIARDPNNRVRMKAVPSSNTRYQAR 943
+HA L+EQF+ HT+ R+Y+SLTCGVP+ +G IE+ IARD NNR+RM AV N +AR
Sbjct: 252 SHAHLSEQFKLHTIHRQYISLTCGVPSPSNGCIEIPIARDMNNRIRMAAVSGQNNTRKAR 311
Query: 944 FAASRYAVTKELCKGGVGVVEWRLETGRTHQIRVHAQHIGFPLLGDEIYGGTKGLALSRL 1123
A SRY V + L GG +VEWRL+TGRTHQIRVHA++IG PLLGDE+YGGTK +ALSRL
Sbjct: 312 LATSRYHVMEVLAGGGSALVEWRLQTGRTHQIRVHAKYIGNPLLGDEVYGGTKSMALSRL 371
Query: 1124 KCKLPSKYHGEISKVISSIERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 1303
+ + PS YHG +S+++S+++RPCLHA SLGF+HP + E VLF+CPPP DF +VL L+ +
Sbjct: 372 RPRTPSHYHGPLSQLVSNLQRPCLHAFSLGFKHPHSKENVLFTCPPPPDFAEVLRQLQSI 431
Query: 1304 K 1306
+
Sbjct: 432 R 432
>ERM96267.1 hypothetical protein AMTR_s00001p00157430 [Amborella trichopoda]
Length = 452
Score = 417 bits (1073), Expect = e-139
Identities = 201/361 (55%), Positives = 259/361 (71%), Gaps = 3/361 (0%)
Frame = +2
Query: 233 FNDKVGEGTPKQRLDAWLSSRMEGISRARIQSSVRQGLVHVNGTSINKTSHIIRAGDIIS 412
F V G+ K+R+D+WLS+R+ +SRARIQSS+RQG V VNG I K SHI++ GD++
Sbjct: 72 FESSVAVGSKKERIDSWLSARIGDVSRARIQSSIRQGFVKVNGLPITKVSHIVKVGDMVD 131
Query: 413 CNIAPLVPLRAEPEEMQLXXXXXXXXXXXXNKPAHMVVHPAPGNPNGTLVNGILHHCGLP 592
C ++ L PL+AEPE+M L NKPAHMVVHPAPGN NGTLVNGILHHC LP
Sbjct: 132 CTVSHLQPLKAEPEDMPLDIIYEDDHVLVVNKPAHMVVHPAPGNANGTLVNGILHHCTLP 191
Query: 593 SIGCXXXXXXXXXXXXXXXEVNM---PLLDCSLESAVRPGIVHRIDKGTSGLLVIAKNEN 763
+ G + M + S++RPGIVHR+DKGTSGLLV+AKNE+
Sbjct: 192 AFGLPDGELTSESDDECDNGLTMFNPDPISTQCRSSIRPGIVHRLDKGTSGLLVVAKNEH 251
Query: 764 AHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMSIARDPNNRVRMKAVPSSNTRYQAR 943
+HA L+EQF+ HT+ R+Y+SLTCGVP+ +G IE+ IARD NNR+RM AV N +AR
Sbjct: 252 SHAHLSEQFKLHTIHRQYISLTCGVPSPSNGCIEIPIARDMNNRIRMAAVSGQNNTRKAR 311
Query: 944 FAASRYAVTKELCKGGVGVVEWRLETGRTHQIRVHAQHIGFPLLGDEIYGGTKGLALSRL 1123
A SRY V + L GG +VEWRL+TGRTHQIRVHA++IG PLLGDE+YGGTK +ALSRL
Sbjct: 312 LATSRYHVMEVLAGGGSALVEWRLQTGRTHQIRVHAKYIGNPLLGDEVYGGTKSMALSRL 371
Query: 1124 KCKLPSKYHGEISKVISSIERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 1303
+ + PS YHG +S+++S+++RPCLHA SLGF+HP + E VLF+CPPP DF +VL L+ +
Sbjct: 372 RPRTPSHYHGPLSQLVSNLQRPCLHAFSLGFKHPHSKENVLFTCPPPPDFAEVLRQLQSI 431
Query: 1304 K 1306
+
Sbjct: 432 R 432
>XP_010241330.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X3
[Nelumbo nucifera]
Length = 443
Score = 410 bits (1055), Expect = e-136
Identities = 217/420 (51%), Positives = 281/420 (66%), Gaps = 17/420 (4%)
Frame = +2
Query: 95 YLVSFPPRRITVSASTSR--RVLTRAVISTTPTPAKTIAVCKEEHDKG------FNDKVG 250
YL+ PR ASTSR RVL + S+T A + ++ +G D V
Sbjct: 22 YLLHRSPR-----ASTSRFFRVLNCS-FSSTGESASDYQSSEPQNRRGNFAGVCLEDTVE 75
Query: 251 EGTPKQRLDAWLSSRMEGISRARIQSSVRQGLVHVNGTSINKTSHIIRAGDIISCNIAPL 430
+ K R+D+W+SSR+ GISRAR+QSS++ GLV VNG I+K SH+IRAGD ++C I L
Sbjct: 76 ISSVKSRIDSWISSRIPGISRARVQSSIKSGLVSVNGRIIDKVSHVIRAGDKVNCTIKEL 135
Query: 431 VPLRAEPEEMQLXXXXXXXXXXXXNKPAHMVVHPAPGNPNGTLVNGILHHCGLPSIGCXX 610
PLRAEPE++ L NKPAHMVVHPAPGN NGTLVNGILHHC LP +
Sbjct: 136 QPLRAEPEDIPLDIVYEDESVLVVNKPAHMVVHPAPGNANGTLVNGILHHCSLPMVALTN 195
Query: 611 XXXXXXXXXXXXXEVNM---------PLLDCSLESAVRPGIVHRIDKGTSGLLVIAKNEN 763
E ++ + E +VRPGIVHR+DKGTSGLLV+AK+E+
Sbjct: 196 SKVLSETDDISDDESDIFSSTQGSMEEVTSNICEVSVRPGIVHRLDKGTSGLLVVAKDEH 255
Query: 764 AHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMSIARDPNNRVRMKAVPSSNTRYQAR 943
+HA L+EQF+ HT+ R Y+SLTCGVP+ GRIE+ I RD +NR+RM AVPS N+ QAR
Sbjct: 256 SHAHLSEQFKLHTINRIYLSLTCGVPSLNSGRIEVPIGRDLSNRIRMAAVPSPNSSRQAR 315
Query: 944 FAASRYAVTKELCKGGVGVVEWRLETGRTHQIRVHAQHIGFPLLGDEIYGGTKGLALSRL 1123
AASRY V + L GG +VEWRLETGRTHQIR HA+++G PLLGDE+YGGT+ +ALS L
Sbjct: 316 HAASRYRVVEVLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTRNMALSLL 375
Query: 1124 KCKLPSKYHGEISKVISSIERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 1303
+ + S +HG++S+++S ++RPCLHA +LGF+HP TGE + FSCPPP DF +VL+ LR +
Sbjct: 376 RTRSHSSFHGDLSQLVSKLQRPCLHAFTLGFKHPHTGENMQFSCPPPADFTEVLSQLRSI 435
>XP_010241329.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Nelumbo nucifera]
Length = 453
Score = 410 bits (1055), Expect = e-136
Identities = 217/420 (51%), Positives = 281/420 (66%), Gaps = 17/420 (4%)
Frame = +2
Query: 95 YLVSFPPRRITVSASTSR--RVLTRAVISTTPTPAKTIAVCKEEHDKG------FNDKVG 250
YL+ PR ASTSR RVL + S+T A + ++ +G D V
Sbjct: 22 YLLHRSPR-----ASTSRFFRVLNCS-FSSTGESASDYQSSEPQNRRGNFAGVCLEDTVE 75
Query: 251 EGTPKQRLDAWLSSRMEGISRARIQSSVRQGLVHVNGTSINKTSHIIRAGDIISCNIAPL 430
+ K R+D+W+SSR+ GISRAR+QSS++ GLV VNG I+K SH+IRAGD ++C I L
Sbjct: 76 ISSVKSRIDSWISSRIPGISRARVQSSIKSGLVSVNGRIIDKVSHVIRAGDKVNCTIKEL 135
Query: 431 VPLRAEPEEMQLXXXXXXXXXXXXNKPAHMVVHPAPGNPNGTLVNGILHHCGLPSIGCXX 610
PLRAEPE++ L NKPAHMVVHPAPGN NGTLVNGILHHC LP +
Sbjct: 136 QPLRAEPEDIPLDIVYEDESVLVVNKPAHMVVHPAPGNANGTLVNGILHHCSLPMVALTN 195
Query: 611 XXXXXXXXXXXXXEVNM---------PLLDCSLESAVRPGIVHRIDKGTSGLLVIAKNEN 763
E ++ + E +VRPGIVHR+DKGTSGLLV+AK+E+
Sbjct: 196 SKVLSETDDISDDESDIFSSTQGSMEEVTSNICEVSVRPGIVHRLDKGTSGLLVVAKDEH 255
Query: 764 AHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMSIARDPNNRVRMKAVPSSNTRYQAR 943
+HA L+EQF+ HT+ R Y+SLTCGVP+ GRIE+ I RD +NR+RM AVPS N+ QAR
Sbjct: 256 SHAHLSEQFKLHTINRIYLSLTCGVPSLNSGRIEVPIGRDLSNRIRMAAVPSPNSSRQAR 315
Query: 944 FAASRYAVTKELCKGGVGVVEWRLETGRTHQIRVHAQHIGFPLLGDEIYGGTKGLALSRL 1123
AASRY V + L GG +VEWRLETGRTHQIR HA+++G PLLGDE+YGGT+ +ALS L
Sbjct: 316 HAASRYRVVEVLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTRNMALSLL 375
Query: 1124 KCKLPSKYHGEISKVISSIERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 1303
+ + S +HG++S+++S ++RPCLHA +LGF+HP TGE + FSCPPP DF +VL+ LR +
Sbjct: 376 RTRSHSSFHGDLSQLVSKLQRPCLHAFTLGFKHPHTGENMQFSCPPPADFTEVLSQLRSI 435
>XP_010533976.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Tarenaya
hassleriana]
Length = 435
Score = 409 bits (1052), Expect = e-136
Identities = 217/412 (52%), Positives = 275/412 (66%)
Frame = +2
Query: 68 TTALSSPLSYLVSFPPRRITVSASTSRRVLTRAVISTTPTPAKTIAVCKEEHDKGFNDKV 247
+++ SS LS L SF PR S+S + V +P + A K F + V
Sbjct: 24 SSSSSSSLSVLFSFFPRVSRFVRSSSGIPDSDRVRRPEISPRASNAGVK------FQETV 77
Query: 248 GEGTPKQRLDAWLSSRMEGISRARIQSSVRQGLVHVNGTSINKTSHIIRAGDIISCNIAP 427
T K RLD+W+SSR+ G+SRAR+QSS+R GLV VNG ++K SH ++AGD++SC I+
Sbjct: 78 DVATGKIRLDSWISSRVHGVSRARVQSSIRLGLVCVNGRVVDKVSHNVKAGDMVSCTISE 137
Query: 428 LVPLRAEPEEMQLXXXXXXXXXXXXNKPAHMVVHPAPGNPNGTLVNGILHHCGLPSIGCX 607
L PL+AEPE+M L NKPAHMVVHPAPGNPNGTLVNGILHHC LP +
Sbjct: 138 LQPLKAEPEDMPLDIVYEDNHVLVVNKPAHMVVHPAPGNPNGTLVNGILHHCSLPIVAYS 197
Query: 608 XXXXXXXXXXXXXXEVNMPLLDCSLESAVRPGIVHRIDKGTSGLLVIAKNENAHACLAEQ 787
E M + ++VRPGIVHR+DKGTSGLLV+AK+E++HA LAEQ
Sbjct: 198 DTEVDPDEEDFSEDEETMS--SSAYSASVRPGIVHRLDKGTSGLLVVAKDEHSHAHLAEQ 255
Query: 788 FEKHTVFRKYVSLTCGVPAERDGRIEMSIARDPNNRVRMKAVPSSNTRYQARFAASRYAV 967
F++HT+ R YVSLTCGVP+ GRI + I RD NNR+RM A+P + R +AR AASRY V
Sbjct: 256 FKQHTIERVYVSLTCGVPSPSHGRIVIPIGRDLNNRIRMAAIPGLSNRGRARHAASRYKV 315
Query: 968 TKELCKGGVGVVEWRLETGRTHQIRVHAQHIGFPLLGDEIYGGTKGLALSRLKCKLPSKY 1147
+ L GG +VEWRLETGRTHQIR HA+++G PLLGDE+YG TK +ALS L+ +
Sbjct: 316 IEILAGGGSALVEWRLETGRTHQIRAHAKYVGVPLLGDEVYGATKSMALSLLQKRASRND 375
Query: 1148 HGEISKVISSIERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 1303
HG+I +++S ++RPCLHA LGF+HP TGE V FSCPPP DF + L LRKL
Sbjct: 376 HGQILELVSRLDRPCLHALVLGFKHPCTGEDVKFSCPPPPDFAETLGMLRKL 427
>XP_010241328.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Nelumbo nucifera]
Length = 471
Score = 410 bits (1055), Expect = e-136
Identities = 217/420 (51%), Positives = 281/420 (66%), Gaps = 17/420 (4%)
Frame = +2
Query: 95 YLVSFPPRRITVSASTSR--RVLTRAVISTTPTPAKTIAVCKEEHDKG------FNDKVG 250
YL+ PR ASTSR RVL + S+T A + ++ +G D V
Sbjct: 22 YLLHRSPR-----ASTSRFFRVLNCS-FSSTGESASDYQSSEPQNRRGNFAGVCLEDTVE 75
Query: 251 EGTPKQRLDAWLSSRMEGISRARIQSSVRQGLVHVNGTSINKTSHIIRAGDIISCNIAPL 430
+ K R+D+W+SSR+ GISRAR+QSS++ GLV VNG I+K SH+IRAGD ++C I L
Sbjct: 76 ISSVKSRIDSWISSRIPGISRARVQSSIKSGLVSVNGRIIDKVSHVIRAGDKVNCTIKEL 135
Query: 431 VPLRAEPEEMQLXXXXXXXXXXXXNKPAHMVVHPAPGNPNGTLVNGILHHCGLPSIGCXX 610
PLRAEPE++ L NKPAHMVVHPAPGN NGTLVNGILHHC LP +
Sbjct: 136 QPLRAEPEDIPLDIVYEDESVLVVNKPAHMVVHPAPGNANGTLVNGILHHCSLPMVALTN 195
Query: 611 XXXXXXXXXXXXXEVNM---------PLLDCSLESAVRPGIVHRIDKGTSGLLVIAKNEN 763
E ++ + E +VRPGIVHR+DKGTSGLLV+AK+E+
Sbjct: 196 SKVLSETDDISDDESDIFSSTQGSMEEVTSNICEVSVRPGIVHRLDKGTSGLLVVAKDEH 255
Query: 764 AHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMSIARDPNNRVRMKAVPSSNTRYQAR 943
+HA L+EQF+ HT+ R Y+SLTCGVP+ GRIE+ I RD +NR+RM AVPS N+ QAR
Sbjct: 256 SHAHLSEQFKLHTINRIYLSLTCGVPSLNSGRIEVPIGRDLSNRIRMAAVPSPNSSRQAR 315
Query: 944 FAASRYAVTKELCKGGVGVVEWRLETGRTHQIRVHAQHIGFPLLGDEIYGGTKGLALSRL 1123
AASRY V + L GG +VEWRLETGRTHQIR HA+++G PLLGDE+YGGT+ +ALS L
Sbjct: 316 HAASRYRVVEVLAGGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTRNMALSLL 375
Query: 1124 KCKLPSKYHGEISKVISSIERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 1303
+ + S +HG++S+++S ++RPCLHA +LGF+HP TGE + FSCPPP DF +VL+ LR +
Sbjct: 376 RTRSHSSFHGDLSQLVSKLQRPCLHAFTLGFKHPHTGENMQFSCPPPADFTEVLSQLRSI 435
>XP_003634352.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Vitis vinifera] CBI18920.3 unnamed protein product,
partial [Vitis vinifera]
Length = 433
Score = 406 bits (1044), Expect = e-135
Identities = 194/354 (54%), Positives = 258/354 (72%), Gaps = 1/354 (0%)
Frame = +2
Query: 245 VGEGTPKQRLDAWLSSRMEGISRARIQSSVRQGLVHVNGTSINKTSHIIRAGDIISCNIA 424
V + K RLD+W+SSR+ GISRAR+QSS+R GLV VN ++K SH+IRAGD ++C I+
Sbjct: 70 VNSDSGKLRLDSWISSRIIGISRARVQSSIRSGLVSVNDRIVDKVSHVIRAGDKVNCTIS 129
Query: 425 PLVPLRAEPEEMQLXXXXXXXXXXXXNKPAHMVVHPAPGNPNGTLVNGILHHCGLPSIGC 604
L PLRAEPE++ L NKPAHMVVHPAPGN +GTLVNGILHHC LP++
Sbjct: 130 ELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNASGTLVNGILHHCSLPTVAL 189
Query: 605 XXXXXXXXXXXXXXXEVNMPLLDC-SLESAVRPGIVHRIDKGTSGLLVIAKNENAHACLA 781
+C + E+ +RPGIVHR+DKGTSGLLV+AK+E++HA L+
Sbjct: 190 PNRDSEEDDISDDEFNSFAAGQNCGTCETNIRPGIVHRLDKGTSGLLVVAKDEHSHAHLS 249
Query: 782 EQFEKHTVFRKYVSLTCGVPAERDGRIEMSIARDPNNRVRMKAVPSSNTRYQARFAASRY 961
EQF+ H++ R Y+SLT GVP GR+E+ + RDPNNR+RM AVP + QAR AASRY
Sbjct: 250 EQFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPNNRIRMTAVPGPSNSGQARHAASRY 309
Query: 962 AVTKELCKGGVGVVEWRLETGRTHQIRVHAQHIGFPLLGDEIYGGTKGLALSRLKCKLPS 1141
V + L GG +VEWRLETGRTHQIR HA+++G PLLGDE+YGGTK +ALS L+ ++PS
Sbjct: 310 KVIEILAAGGSALVEWRLETGRTHQIRAHAKYLGIPLLGDEVYGGTKNMALSLLRPRIPS 369
Query: 1142 KYHGEISKVISSIERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 1303
+HG++++++S ++RPCLHA +LGF HP+TG+ V FSC PP+DF ++L++LRK+
Sbjct: 370 SHHGQLAQLVSRLDRPCLHAVALGFNHPKTGKNVHFSCQPPEDFAEILSWLRKI 423
>XP_015887376.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Ziziphus
jujuba]
Length = 442
Score = 404 bits (1039), Expect = e-134
Identities = 213/424 (50%), Positives = 280/424 (66%), Gaps = 16/424 (3%)
Frame = +2
Query: 77 LSSPLSYLVSFPPR-RITVS---ASTSRRVLTRAVISTTPTPAKTIAVCKEEHDKG---- 232
++SP + V FPP +IT ASTSR ++R + +T+ + +I+ +E G
Sbjct: 15 VTSPSLFFVFFPPNPKITACPPFASTSR--ISRILRATSTSTGVSISDGNDEALAGHRNN 72
Query: 233 -----FNDKVGEGTPKQRLDAWLSSRMEGISRARIQSSVRQGLVHVNGTSINKTSHIIRA 397
+ V + K RLD+W+SSR+ GISRAR+QSS+R GLV VNG ++K SH ++A
Sbjct: 73 YSGVRLEETVAVDSRKLRLDSWISSRVSGISRARVQSSIRSGLVSVNGRIVDKVSHNVKA 132
Query: 398 GDIISCNIAPLVPLRAEPEEMQLXXXXXXXXXXXXNKPAHMVVHPAPGNPNGTLVNGILH 577
GD ++C I+ L PLRAEPE + L NKPAHMVVHPAPGN GTLVNGILH
Sbjct: 133 GDRVNCTISELQPLRAEPENIPLDIVYEDDHVLVVNKPAHMVVHPAPGNATGTLVNGILH 192
Query: 578 HCGLPSIGCXXXXXXXXXXXXXXXEVNMPLLDCS---LESAVRPGIVHRIDKGTSGLLVI 748
HC LP++ + +D S +++VRPGIVHR+DKGTSGLLV+
Sbjct: 193 HCSLPTVAFSNHDGLSDSEDNCDDGLGYFSVDQSSSTCQASVRPGIVHRLDKGTSGLLVV 252
Query: 749 AKNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMSIARDPNNRVRMKAVPSSNT 928
AKNE +HA L++QF+ HT+ R Y+SLT GVP+ GR+++ I RD NNR+RM A+P
Sbjct: 253 AKNELSHAHLSDQFKLHTIHRVYISLTSGVPSPLAGRVDIPIGRDSNNRIRMTAIPGPIK 312
Query: 929 RYQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRVHAQHIGFPLLGDEIYGGTKGL 1108
Q R AASRY V + L GG +VEWRLETGRTHQIR HA+H+G PLLGDE+YGGTK +
Sbjct: 313 SKQGRHAASRYKVIEVLAGGGSALVEWRLETGRTHQIRAHAKHLGIPLLGDELYGGTKSM 372
Query: 1109 ALSRLKCKLPSKYHGEISKVISSIERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLN 1288
ALS L + PS HG++S+++S ERPCLHA +L F+HP TG+ + FSCPPP DF ++LN
Sbjct: 373 ALSLLWPRTPSSCHGQLSQLVSEFERPCLHAMALRFKHPHTGKNIHFSCPPPSDFAEILN 432
Query: 1289 YLRK 1300
LRK
Sbjct: 433 QLRK 436
>XP_016687702.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like isoform
X1 [Gossypium hirsutum]
Length = 432
Score = 402 bits (1032), Expect = e-133
Identities = 205/392 (52%), Positives = 270/392 (68%), Gaps = 4/392 (1%)
Frame = +2
Query: 140 TSRRVLTRAVISTTPT----PAKTIAVCKEEHDKGFNDKVGEGTPKQRLDAWLSSRMEGI 307
T R+L IST+ T P +T + + K G K RLD+W+SSR++GI
Sbjct: 36 TISRILRATSISTSATKHEEPIRTSYAGVQLEETVDETKQG----KLRLDSWISSRIQGI 91
Query: 308 SRARIQSSVRQGLVHVNGTSINKTSHIIRAGDIISCNIAPLVPLRAEPEEMQLXXXXXXX 487
SRAR+QSS++ GLV VNG ++K SH +RAGD + C I+ L PL+AEPE++ L
Sbjct: 92 SRARVQSSIKSGLVKVNGRVVDKVSHSLRAGDKVDCVISDLQPLKAEPEDIPLDIVFEDD 151
Query: 488 XXXXXNKPAHMVVHPAPGNPNGTLVNGILHHCGLPSIGCXXXXXXXXXXXXXXXEVNMPL 667
NKP+HMVVHPAPGN NGTLVNGILHHC LP++ E ++
Sbjct: 152 HVLVVNKPSHMVVHPAPGNANGTLVNGILHHCSLPTVASSEKEVLFDTQDMSDDEQDIFH 211
Query: 668 LDCSLESAVRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVPAE 847
+ ++VRPGIVHR+DKGTSGLLV+AK+E +HA L+EQF++HT+ R Y+SLTCGVP+
Sbjct: 212 GASAGAASVRPGIVHRLDKGTSGLLVVAKDEYSHAHLSEQFKQHTIQRVYISLTCGVPSA 271
Query: 848 RDGRIEMSIARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLETGR 1027
GR+++ I RD NNR+RM AVP + QAR AASRY V + L GG +V+WRLETGR
Sbjct: 272 SSGRVDIPIGRDSNNRIRMVAVPGLSHHGQARHAASRYKVIEVLAGGGSALVQWRLETGR 331
Query: 1028 THQIRVHAQHIGFPLLGDEIYGGTKGLALSRLKCKLPSKYHGEISKVISSIERPCLHAHS 1207
THQIR HA+++G PLLGDE+YGGTK +ALS L+ + P Y+ E+S+++S +ERP LHA
Sbjct: 332 THQIRAHAKYMGIPLLGDEVYGGTKNMALSLLRPRTPPYYNDELSRLVSRLERPYLHALV 391
Query: 1208 LGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 1303
LGFEHP +GEK+ FSCPPP DF ++LN+LRK+
Sbjct: 392 LGFEHPHSGEKMRFSCPPPPDFGEILNHLRKI 423
>XP_012444688.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic [Gossypium
raimondii]
Length = 432
Score = 402 bits (1032), Expect = e-133
Identities = 205/392 (52%), Positives = 270/392 (68%), Gaps = 4/392 (1%)
Frame = +2
Query: 140 TSRRVLTRAVISTTPT----PAKTIAVCKEEHDKGFNDKVGEGTPKQRLDAWLSSRMEGI 307
T R+L IST+ T P +T + + K G K RLD+W+SSR++GI
Sbjct: 36 TISRILRATSISTSATKHEEPIRTSYAGVQLEETVDETKQG----KLRLDSWISSRIQGI 91
Query: 308 SRARIQSSVRQGLVHVNGTSINKTSHIIRAGDIISCNIAPLVPLRAEPEEMQLXXXXXXX 487
SRAR+QSS++ GLV VNG ++K SH +RAGD + C I+ L PL+AEPE++ L
Sbjct: 92 SRARVQSSIKSGLVKVNGRVVDKVSHSLRAGDKVDCVISDLQPLKAEPEDIPLDIVFEDD 151
Query: 488 XXXXXNKPAHMVVHPAPGNPNGTLVNGILHHCGLPSIGCXXXXXXXXXXXXXXXEVNMPL 667
NKP+HMVVHPAPGN NGTLVNGILHHC LP++ E ++
Sbjct: 152 HVLVVNKPSHMVVHPAPGNANGTLVNGILHHCSLPTVASSEKEVLFDTEDMSDDEQDIFH 211
Query: 668 LDCSLESAVRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVPAE 847
+ ++VRPGIVHR+DKGTSGLLV+AK+E +HA L+EQF++HT+ R Y+SLTCGVP+
Sbjct: 212 GASAGAASVRPGIVHRLDKGTSGLLVVAKDEYSHAHLSEQFKQHTIQRVYISLTCGVPSA 271
Query: 848 RDGRIEMSIARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLETGR 1027
GR+++ I RD NNR+RM AVP + QAR AASRY V + L GG +V+WRLETGR
Sbjct: 272 ASGRVDIPIGRDSNNRIRMVAVPGLSHHGQARHAASRYKVIEVLAGGGSALVQWRLETGR 331
Query: 1028 THQIRVHAQHIGFPLLGDEIYGGTKGLALSRLKCKLPSKYHGEISKVISSIERPCLHAHS 1207
THQIR HA+++G PLLGDE+YGGTK +ALS L+ + P Y+ E+S+++S +ERP LHA
Sbjct: 332 THQIRAHAKYMGIPLLGDEVYGGTKNMALSLLRPRTPPYYNDELSRLVSRLERPYLHALV 391
Query: 1208 LGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 1303
LGFEHP +GEK+ FSCPPP DF ++LN+LRK+
Sbjct: 392 LGFEHPHSGEKMRFSCPPPPDFGEILNHLRKI 423
>XP_006342081.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Solanum tuberosum]
Length = 431
Score = 401 bits (1031), Expect = e-133
Identities = 198/358 (55%), Positives = 256/358 (71%), Gaps = 9/358 (2%)
Frame = +2
Query: 257 TPKQRLDAWLSSRMEGISRARIQSSVRQGLVHVNGTSINKTSHIIRAGDIISCNIAPLVP 436
T K RLD+W+SSR++G+SRAR+QSS+R GLV VNG +K SH+++ GD + C IA L P
Sbjct: 68 TGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHMVKGGDKVDCTIADLKP 127
Query: 437 LRAEPEEMQLXXXXXXXXXXXXNKPAHMVVHPAPGNPNGTLVNGILHHCGLPSIGCXXXX 616
LRAEPE++ L NKPAHMVVHPAPGN GTLV+GILHHC LP+I
Sbjct: 128 LRAEPEDIPLDIVFEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTISFLGEE 187
Query: 617 XXXXXXXXXXXEVNM------PLLDCS---LESAVRPGIVHRIDKGTSGLLVIAKNENAH 769
E+N+ P D S ES+VRPGIVHR+DKGTSGLLV+AKNEN+
Sbjct: 188 VLSDAEDASDDELNVFSGNRSPNYDDSSVMCESSVRPGIVHRLDKGTSGLLVVAKNENSL 247
Query: 770 ACLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMSIARDPNNRVRMKAVPSSNTRYQARFA 949
A LAEQF+KHT+ R YVS+TCGVPA GR+++ I RD NNR+RM A+P + ++R A
Sbjct: 248 ASLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKSGKSRHA 307
Query: 950 ASRYAVTKELCKGGVGVVEWRLETGRTHQIRVHAQHIGFPLLGDEIYGGTKGLALSRLKC 1129
SRY V ++L +GG +VEWRLETGRTHQIR HA+++G PL+GDE+YGGTK +ALS L+
Sbjct: 308 VSRYKVIEKLARGGSALVEWRLETGRTHQIRAHAKYLGIPLMGDEVYGGTKNMALSLLQP 367
Query: 1130 KLPSKYHGEISKVISSIERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 1303
K P +HG++S+++S I+RPCLHA +LGF HP TGE + F+ PP DF ++L+YLR +
Sbjct: 368 KTPPMFHGKLSQLVSQIDRPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSYLRAI 425
>XP_017621288.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Gossypium arboreum]
Length = 432
Score = 401 bits (1030), Expect = e-132
Identities = 206/394 (52%), Positives = 273/394 (69%), Gaps = 6/394 (1%)
Frame = +2
Query: 140 TSRRVLTRAVISTT------PTPAKTIAVCKEEHDKGFNDKVGEGTPKQRLDAWLSSRME 301
T R+L IST+ PT V EE D+ +G K RLD+W+SSR++
Sbjct: 36 TISRILRATSISTSAAKHEEPTRTSYAGVQLEETV----DETKQG--KLRLDSWISSRIQ 89
Query: 302 GISRARIQSSVRQGLVHVNGTSINKTSHIIRAGDIISCNIAPLVPLRAEPEEMQLXXXXX 481
GISRAR+QSS++ GLV VNG ++K SH +RAGD ++C I+ L PL+AEPE++ L
Sbjct: 90 GISRARVQSSIKSGLVKVNGRVVDKVSHSLRAGDKVNCVISDLQPLKAEPEDIPLDIVFE 149
Query: 482 XXXXXXXNKPAHMVVHPAPGNPNGTLVNGILHHCGLPSIGCXXXXXXXXXXXXXXXEVNM 661
NKP+HMVVHPAPGN NGTLVNGILHHC LP++ E ++
Sbjct: 150 DDHVLVVNKPSHMVVHPAPGNANGTLVNGILHHCSLPTVASSEKEVLFDTEDMSDDEQDI 209
Query: 662 PLLDCSLESAVRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVP 841
+ ++VRPGIVHR+DKGTSGLLV+AK+E++HA L+EQF++HT+ R Y+SLTCGVP
Sbjct: 210 FHGASAGAASVRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKQHTIQRVYISLTCGVP 269
Query: 842 AERDGRIEMSIARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLET 1021
+ GR+++ I RD NNR+RM AVP + +AR AASRY V + L GG +V+WRLET
Sbjct: 270 SASAGRVDIPIGRDSNNRIRMAAVPGLSHHGRARHAASRYKVIEVLAGGGSALVQWRLET 329
Query: 1022 GRTHQIRVHAQHIGFPLLGDEIYGGTKGLALSRLKCKLPSKYHGEISKVISSIERPCLHA 1201
GRTHQIR HA+++G PLLGDE+YGGTK +ALS L+ + P Y+ E+S+++S +ERP LHA
Sbjct: 330 GRTHQIRAHAKYMGIPLLGDEVYGGTKNMALSLLRPRTPPYYNDELSRLVSRLERPYLHA 389
Query: 1202 HSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 1303
LGFEHP +GEK+ FSCPPP DF ++LN+LRK+
Sbjct: 390 LVLGFEHPHSGEKMRFSCPPPPDFGEILNHLRKI 423
>KHG01344.1 hypothetical protein F383_22314 [Gossypium arboreum]
Length = 446
Score = 400 bits (1029), Expect = e-132
Identities = 206/394 (52%), Positives = 273/394 (69%), Gaps = 6/394 (1%)
Frame = +2
Query: 140 TSRRVLTRAVISTT------PTPAKTIAVCKEEHDKGFNDKVGEGTPKQRLDAWLSSRME 301
T R+L IST+ PT V EE D+ +G K RLD+W+SSR++
Sbjct: 36 TISRILRATSISTSAAKHEEPTRTSYAGVQLEETV----DETKQG--KLRLDSWISSRIQ 89
Query: 302 GISRARIQSSVRQGLVHVNGTSINKTSHIIRAGDIISCNIAPLVPLRAEPEEMQLXXXXX 481
GISRAR+QSS++ GLV VNG ++K SH +RAGD ++C I+ L PL+AEPE++ L
Sbjct: 90 GISRARVQSSIKSGLVKVNGRVVDKVSHSLRAGDKVNCVISDLQPLKAEPEDIPLDIVFE 149
Query: 482 XXXXXXXNKPAHMVVHPAPGNPNGTLVNGILHHCGLPSIGCXXXXXXXXXXXXXXXEVNM 661
NKP+HMVVHPAPGN NGTLVNGILHHC LP++ E ++
Sbjct: 150 DDHVLVVNKPSHMVVHPAPGNANGTLVNGILHHCSLPTVASSEKEVLFDTEDMSDDEQDI 209
Query: 662 PLLDCSLESAVRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHTVFRKYVSLTCGVP 841
+ ++VRPGIVHR+DKGTSGLLV+AK+E++HA L+EQF++HT+ R Y+SLTCGVP
Sbjct: 210 FHGASAGAASVRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKQHTIQRVYISLTCGVP 269
Query: 842 AERDGRIEMSIARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELCKGGVGVVEWRLET 1021
+ GR+++ I RD NNR+RM AVP + +AR AASRY V + L GG +V+WRLET
Sbjct: 270 SASAGRVDIPIGRDSNNRIRMVAVPGLSHHGRARHAASRYKVIEVLAGGGSALVQWRLET 329
Query: 1022 GRTHQIRVHAQHIGFPLLGDEIYGGTKGLALSRLKCKLPSKYHGEISKVISSIERPCLHA 1201
GRTHQIR HA+++G PLLGDE+YGGTK +ALS L+ + P Y+ E+S+++S +ERP LHA
Sbjct: 330 GRTHQIRAHAKYMGIPLLGDEVYGGTKNMALSLLRPRTPPYYNDELSRLVSRLERPYLHA 389
Query: 1202 HSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 1303
LGFEHP +GEK+ FSCPPP DF ++LN+LRK+
Sbjct: 390 LVLGFEHPHSGEKMRFSCPPPPDFGEILNHLRKI 423
>XP_010320443.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Solanum lycopersicum]
Length = 431
Score = 400 bits (1027), Expect = e-132
Identities = 199/365 (54%), Positives = 257/365 (70%), Gaps = 9/365 (2%)
Frame = +2
Query: 239 DKVGEGTPKQRLDAWLSSRMEGISRARIQSSVRQGLVHVNGTSINKTSHIIRAGDIISCN 418
+ V T K RLD+W+SSR++G+SRAR+QSS+R GLV VNG +K SH+++ GD + C
Sbjct: 62 ETVDSKTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHMVKGGDKVDCT 121
Query: 419 IAPLVPLRAEPEEMQLXXXXXXXXXXXXNKPAHMVVHPAPGNPNGTLVNGILHHCGLPSI 598
IA L PLRAEPE++ L NKPAHMVVHPAPGN GTLV+GILHHC LP++
Sbjct: 122 IADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTV 181
Query: 599 GCXXXXXXXXXXXXXXXEVNM------PLLDCS---LESAVRPGIVHRIDKGTSGLLVIA 751
E+N+ P D S ES+VRPGIVHR+DKGTSGLLV+A
Sbjct: 182 SFPGEEVLSDGEDASDDELNIFSPNRSPNYDDSSVMCESSVRPGIVHRLDKGTSGLLVVA 241
Query: 752 KNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMSIARDPNNRVRMKAVPSSNTR 931
KNE++ A LAEQF+KHT+ R YVS+TCGVPA GR+++ I RD NNR+RM A+P +
Sbjct: 242 KNEHSLADLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKS 301
Query: 932 YQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRVHAQHIGFPLLGDEIYGGTKGLA 1111
++R A SRY V ++L GG +VEWRLETGRTHQIR HA+H+G PL+GDE+YGGTK +A
Sbjct: 302 GKSRHAVSRYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKHLGIPLMGDEVYGGTKNMA 361
Query: 1112 LSRLKCKLPSKYHGEISKVISSIERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNY 1291
LS L+ K P +HGE+S+++S I+RPCLHA +LGF HP TGE + F+ PP DF ++L+
Sbjct: 362 LSLLQPKTPPMFHGELSQLVSQIDRPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSE 421
Query: 1292 LRKLK 1306
LR +K
Sbjct: 422 LRAIK 426
>XP_004238386.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Solanum lycopersicum]
Length = 436
Score = 400 bits (1027), Expect = e-132
Identities = 199/365 (54%), Positives = 257/365 (70%), Gaps = 9/365 (2%)
Frame = +2
Query: 239 DKVGEGTPKQRLDAWLSSRMEGISRARIQSSVRQGLVHVNGTSINKTSHIIRAGDIISCN 418
+ V T K RLD+W+SSR++G+SRAR+QSS+R GLV VNG +K SH+++ GD + C
Sbjct: 62 ETVDSKTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHMVKGGDKVDCT 121
Query: 419 IAPLVPLRAEPEEMQLXXXXXXXXXXXXNKPAHMVVHPAPGNPNGTLVNGILHHCGLPSI 598
IA L PLRAEPE++ L NKPAHMVVHPAPGN GTLV+GILHHC LP++
Sbjct: 122 IADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTV 181
Query: 599 GCXXXXXXXXXXXXXXXEVNM------PLLDCS---LESAVRPGIVHRIDKGTSGLLVIA 751
E+N+ P D S ES+VRPGIVHR+DKGTSGLLV+A
Sbjct: 182 SFPGEEVLSDGEDASDDELNIFSPNRSPNYDDSSVMCESSVRPGIVHRLDKGTSGLLVVA 241
Query: 752 KNENAHACLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMSIARDPNNRVRMKAVPSSNTR 931
KNE++ A LAEQF+KHT+ R YVS+TCGVPA GR+++ I RD NNR+RM A+P +
Sbjct: 242 KNEHSLADLAEQFKKHTIKRVYVSITCGVPASVAGRVDIPIGRDSNNRIRMAAIPGTPKS 301
Query: 932 YQARFAASRYAVTKELCKGGVGVVEWRLETGRTHQIRVHAQHIGFPLLGDEIYGGTKGLA 1111
++R A SRY V ++L GG +VEWRLETGRTHQIR HA+H+G PL+GDE+YGGTK +A
Sbjct: 302 GKSRHAVSRYKVIEKLAGGGSALVEWRLETGRTHQIRAHAKHLGIPLMGDEVYGGTKNMA 361
Query: 1112 LSRLKCKLPSKYHGEISKVISSIERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNY 1291
LS L+ K P +HGE+S+++S I+RPCLHA +LGF HP TGE + F+ PP DF ++L+
Sbjct: 362 LSLLQPKTPPMFHGELSQLVSQIDRPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSE 421
Query: 1292 LRKLK 1306
LR +K
Sbjct: 422 LRAIK 426
>XP_016725957.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
[Gossypium hirsutum]
Length = 432
Score = 399 bits (1026), Expect = e-132
Identities = 193/347 (55%), Positives = 256/347 (73%)
Frame = +2
Query: 263 KQRLDAWLSSRMEGISRARIQSSVRQGLVHVNGTSINKTSHIIRAGDIISCNIAPLVPLR 442
K RLD+W+SSR++GISRAR+QSS++ GLV VNG ++K SH +RAGD ++C I+ L PL+
Sbjct: 77 KLRLDSWISSRIQGISRARVQSSIKSGLVKVNGRVVDKVSHSLRAGDKVNCVISDLQPLK 136
Query: 443 AEPEEMQLXXXXXXXXXXXXNKPAHMVVHPAPGNPNGTLVNGILHHCGLPSIGCXXXXXX 622
AEPE++ L NKP+HMVVHPAPGN NGTLVNGILHHC LP++
Sbjct: 137 AEPEDIPLDIVFEDDHVLVVNKPSHMVVHPAPGNANGTLVNGILHHCSLPTVASSEKEVL 196
Query: 623 XXXXXXXXXEVNMPLLDCSLESAVRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHT 802
E ++ + ++VRPGIVHR+DKGTSGLLV+AK+E++HA L+EQF++HT
Sbjct: 197 FDTEDMSDDEQDIFHGASAGPASVRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKQHT 256
Query: 803 VFRKYVSLTCGVPAERDGRIEMSIARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELC 982
+ R Y+SLTCGVP+ GR+++ I RD NNR+RM AVP + +AR AASRY V + L
Sbjct: 257 IQRVYISLTCGVPSASAGRVDIPIGRDSNNRIRMVAVPGLSHHGRARHAASRYKVIEVLA 316
Query: 983 KGGVGVVEWRLETGRTHQIRVHAQHIGFPLLGDEIYGGTKGLALSRLKCKLPSKYHGEIS 1162
GG +V+WRLETGRTHQIR HA+++G PLLGDE+YGGTK +ALS L+ + P Y+ E+S
Sbjct: 317 GGGSALVQWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKNMALSLLRPRTPPYYNDELS 376
Query: 1163 KVISSIERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 1303
+++S +ERP LHA LGFEHP +GEK+ FSCPPP DF ++LN+LRK+
Sbjct: 377 RLVSRLERPYLHALVLGFEHPHSGEKMRFSCPPPPDFGEILNHLRKI 423
>XP_016568333.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Capsicum annuum]
Length = 424
Score = 399 bits (1024), Expect = e-132
Identities = 196/357 (54%), Positives = 253/357 (70%), Gaps = 2/357 (0%)
Frame = +2
Query: 239 DKVGEGTPKQRLDAWLSSRMEGISRARIQSSVRQGLVHVNGTSINKTSHIIRAGDIISCN 418
+ V T K RLD W+SSR++G+SRAR+QSS+R GLV VNG +K SH ++AGD ++C
Sbjct: 62 ETVDGNTGKLRLDCWISSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHKVKAGDKVNCT 121
Query: 419 IAPLVPLRAEPEEMQLXXXXXXXXXXXXNKPAHMVVHPAPGNPNGTLVNGILHHCGLPSI 598
IA L PLRAEPE++ L NKPAHMVVHPAPGN GTLV+GILHHC LP+
Sbjct: 122 IADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTC 181
Query: 599 GCXXXXXXXXXXXXXXXEVNMPLLDCSL--ESAVRPGIVHRIDKGTSGLLVIAKNENAHA 772
E+N+ D S+ E +VRPGIVHR+DKGTSGLLV+AKNE++
Sbjct: 182 SFLGEEVLSDVEDASDDELNVSPYDSSVMCEPSVRPGIVHRLDKGTSGLLVVAKNEHSLV 241
Query: 773 CLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMSIARDPNNRVRMKAVPSSNTRYQARFAA 952
LAEQF+KHT+ R YVS+TCGVP GR+++ I RD NNR+RM A+P S ++R A
Sbjct: 242 DLAEQFKKHTIKRVYVSITCGVPTSVSGRVDIPIGRDSNNRIRMAAIPGSPKSGKSRHAV 301
Query: 953 SRYAVTKELCKGGVGVVEWRLETGRTHQIRVHAQHIGFPLLGDEIYGGTKGLALSRLKCK 1132
SRY V +EL GG +VEWRLETGRTHQIR HA+++G PL+GDE+YGGTK +ALS L+ K
Sbjct: 302 SRYKVIEELAGGGSALVEWRLETGRTHQIRAHAKYLGIPLMGDEVYGGTKNMALSLLQPK 361
Query: 1133 LPSKYHGEISKVISSIERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 1303
P ++HG++S+++S IERPCLHA +LGF HP TGE + F+ PP DF ++L+ LR +
Sbjct: 362 TPPRFHGKLSQLVSRIERPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSELRAI 418
>XP_016568332.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Capsicum annuum]
Length = 429
Score = 399 bits (1024), Expect = e-132
Identities = 196/357 (54%), Positives = 253/357 (70%), Gaps = 2/357 (0%)
Frame = +2
Query: 239 DKVGEGTPKQRLDAWLSSRMEGISRARIQSSVRQGLVHVNGTSINKTSHIIRAGDIISCN 418
+ V T K RLD W+SSR++G+SRAR+QSS+R GLV VNG +K SH ++AGD ++C
Sbjct: 62 ETVDGNTGKLRLDCWISSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSHKVKAGDKVNCT 121
Query: 419 IAPLVPLRAEPEEMQLXXXXXXXXXXXXNKPAHMVVHPAPGNPNGTLVNGILHHCGLPSI 598
IA L PLRAEPE++ L NKPAHMVVHPAPGN GTLV+GILHHC LP+
Sbjct: 122 IADLKPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVSGILHHCSLPTC 181
Query: 599 GCXXXXXXXXXXXXXXXEVNMPLLDCSL--ESAVRPGIVHRIDKGTSGLLVIAKNENAHA 772
E+N+ D S+ E +VRPGIVHR+DKGTSGLLV+AKNE++
Sbjct: 182 SFLGEEVLSDVEDASDDELNVSPYDSSVMCEPSVRPGIVHRLDKGTSGLLVVAKNEHSLV 241
Query: 773 CLAEQFEKHTVFRKYVSLTCGVPAERDGRIEMSIARDPNNRVRMKAVPSSNTRYQARFAA 952
LAEQF+KHT+ R YVS+TCGVP GR+++ I RD NNR+RM A+P S ++R A
Sbjct: 242 DLAEQFKKHTIKRVYVSITCGVPTSVSGRVDIPIGRDSNNRIRMAAIPGSPKSGKSRHAV 301
Query: 953 SRYAVTKELCKGGVGVVEWRLETGRTHQIRVHAQHIGFPLLGDEIYGGTKGLALSRLKCK 1132
SRY V +EL GG +VEWRLETGRTHQIR HA+++G PL+GDE+YGGTK +ALS L+ K
Sbjct: 302 SRYKVIEELAGGGSALVEWRLETGRTHQIRAHAKYLGIPLMGDEVYGGTKNMALSLLQPK 361
Query: 1133 LPSKYHGEISKVISSIERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 1303
P ++HG++S+++S IERPCLHA +LGF HP TGE + F+ PP DF ++L+ LR +
Sbjct: 362 TPPRFHGKLSQLVSRIERPCLHALTLGFRHPFTGENIHFTRLPPPDFAEILSELRAI 418
>XP_002519370.2 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2
[Ricinus communis]
Length = 417
Score = 398 bits (1022), Expect = e-131
Identities = 194/347 (55%), Positives = 249/347 (71%)
Frame = +2
Query: 263 KQRLDAWLSSRMEGISRARIQSSVRQGLVHVNGTSINKTSHIIRAGDIISCNIAPLVPLR 442
K RLD+W+SSR+ GISRAR+QSS++ GLV VNG ++K SH ++ GD ++C I+ L PLR
Sbjct: 71 KLRLDSWISSRISGISRARVQSSIKSGLVSVNGRVVDKVSHNVKFGDKVTCTISELQPLR 130
Query: 443 AEPEEMQLXXXXXXXXXXXXNKPAHMVVHPAPGNPNGTLVNGILHHCGLPSIGCXXXXXX 622
AEPE+M L NKP HMVVHPAPGNP GTLVNGILHHC LP++
Sbjct: 131 AEPEDMPLDIVYEDEHLLVVNKPPHMVVHPAPGNPTGTLVNGILHHCNLPTVAISSQEVL 190
Query: 623 XXXXXXXXXEVNMPLLDCSLESAVRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKHT 802
+ C ES++RPGIVHR+DKGTSGLLV+AK+E+AHA L+EQF++HT
Sbjct: 191 SDAEDRSDDDERSYSSSC--ESSIRPGIVHRLDKGTSGLLVVAKDEHAHAHLSEQFKQHT 248
Query: 803 VFRKYVSLTCGVPAERDGRIEMSIARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKELC 982
+ R Y+SLT GVP+ GRI++ I RD NNR+RM A+P + +AR AASR+ V + L
Sbjct: 249 IQRVYISLTSGVPSALTGRIDIPIGRDVNNRIRMTAIPGPIKQGRARHAASRFKVVETLA 308
Query: 983 KGGVGVVEWRLETGRTHQIRVHAQHIGFPLLGDEIYGGTKGLALSRLKCKLPSKYHGEIS 1162
GG +VEWRLETGRTHQIR HA++IG PLLGDE+YGGT+ +ALS L+ ++PS H E+S
Sbjct: 309 GGGSALVEWRLETGRTHQIRAHAKYIGIPLLGDEVYGGTRSMALSLLRPRIPSTCHSELS 368
Query: 1163 KVISSIERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 1303
++S +ERPCLHA +LGF HP T E++ FSCPPP DF D+L LRK+
Sbjct: 369 LLLSKLERPCLHALALGFTHPCTREEIHFSCPPPPDFSDILCLLRKM 415
>XP_006473714.1 PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X1
[Citrus sinensis]
Length = 421
Score = 396 bits (1018), Expect = e-131
Identities = 193/348 (55%), Positives = 250/348 (71%), Gaps = 1/348 (0%)
Frame = +2
Query: 263 KQRLDAWLSSRMEGISRARIQSSVRQGLVHVNGTSINKTSHIIRAGDIISCNIAPLVPLR 442
K RLDAW+SSR++GISRAR+QSS+R GLV +NG ++K SH ++ GD+++C I+ L PLR
Sbjct: 70 KLRLDAWISSRIDGISRARVQSSIRSGLVSINGQVVSKVSHNVKGGDMVNCTISELQPLR 129
Query: 443 AEPEEMQLXXXXXXXXXXXXNKPAHMVVHPAPGNPNGTLVNGILHHCGLPSIGCXXXXXX 622
AE E++ L NKPAHMVVHPAPGN GTLVNGILHHC LP++
Sbjct: 130 AEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPGNATGTLVNGILHHCSLPTLASSNQEAF 189
Query: 623 XXXXXXXXXEVNMPLLDCSLESA-VRPGIVHRIDKGTSGLLVIAKNENAHACLAEQFEKH 799
E S+ A +RPGIVHR+DKGTSGLLV+AK+E++HA L+EQF+ H
Sbjct: 190 SDAEDISDDEE----FSSSISGASIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLH 245
Query: 800 TVFRKYVSLTCGVPAERDGRIEMSIARDPNNRVRMKAVPSSNTRYQARFAASRYAVTKEL 979
T+ R Y+SLT GVP++ GRIE+ I+RDPNNR+RM A+P SN QAR AASRY V + L
Sbjct: 246 TIERVYISLTSGVPSQSSGRIEVPISRDPNNRIRMAAIPGSNKHGQARHAASRYKVIEIL 305
Query: 980 CKGGVGVVEWRLETGRTHQIRVHAQHIGFPLLGDEIYGGTKGLALSRLKCKLPSKYHGEI 1159
GG +VEWRLETGRTHQIR HA+++G PLLGDE+YGGTK +A S L+ + HG++
Sbjct: 306 AGGGSALVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKNMAKSLLQPRTAPGSHGKV 365
Query: 1160 SKVISSIERPCLHAHSLGFEHPRTGEKVLFSCPPPQDFMDVLNYLRKL 1303
K++S ++RPCLHA +LGF HP T EK+ FSCPPP DF ++L+ LR++
Sbjct: 366 LKLVSGLQRPCLHAVALGFTHPHTREKIQFSCPPPADFAEILSQLREI 413