BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00017484
         (371 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010264131.1 PREDICTED: pentatricopeptide repeat-containing pr...    70   1e-11
ERN09426.1 hypothetical protein AMTR_s00029p00062590 [Amborella ...    69   5e-11
XP_006847845.2 PREDICTED: pentatricopeptide repeat-containing pr...    69   5e-11
XP_018816431.1 PREDICTED: pentatricopeptide repeat-containing pr...    68   7e-11
XP_010928525.2 PREDICTED: putative pentatricopeptide repeat-cont...    67   1e-10
XP_010251341.1 PREDICTED: putative pentatricopeptide repeat-cont...    66   3e-10
ONK75776.1 uncharacterized protein A4U43_C03F20430 [Asparagus of...    66   4e-10
ERM99861.1 hypothetical protein AMTR_s00098p00155650 [Amborella ...    65   1e-09
KNA03884.1 hypothetical protein SOVF_204900 [Spinacia oleracea]        64   2e-09
ERN07372.1 hypothetical protein AMTR_s00019p00238380 [Amborella ...    63   2e-09
XP_010245717.1 PREDICTED: pentatricopeptide repeat-containing pr...    64   3e-09
XP_013749917.1 PREDICTED: pentatricopeptide repeat-containing pr...    64   3e-09
XP_018847345.1 PREDICTED: putative pentatricopeptide repeat-cont...    64   3e-09
XP_010245708.1 PREDICTED: pentatricopeptide repeat-containing pr...    64   3e-09
XP_013660502.1 PREDICTED: pentatricopeptide repeat-containing pr...    63   4e-09
XP_013587367.1 PREDICTED: pentatricopeptide repeat-containing pr...    63   4e-09
XP_015875740.1 PREDICTED: pentatricopeptide repeat-containing pr...    63   4e-09
GAV79256.1 PPR domain-containing protein/PPR_2 domain-containing...    63   5e-09
XP_011626080.1 PREDICTED: putative pentatricopeptide repeat-cont...    62   7e-09
JAU84946.1 Pentatricopeptide repeat-containing protein, partial ...    61   7e-09

>XP_010264131.1 PREDICTED: pentatricopeptide repeat-containing protein At1g11290,
           chloroplastic [Nelumbo nucifera]
          Length = 621

 Score = 70.1 bits (170), Expect = 1e-11
 Identities = 28/63 (44%), Positives = 49/63 (77%)
 Frame = +2

Query: 182 YNNTIQDFIKKGLFDPALLMYRRMLCSGIFPDNFSYPYLLKACAHLNDLKAGKILHQSVI 361
           +N  I+ F + GL+D ++L+YR+ML +G+ PDNF++P++LKAC HL D++ G+ +H+ V+
Sbjct: 19  WNVMIRGFTENGLYDRSILLYRQMLETGVAPDNFTFPFVLKACGHLRDVQFGEEVHRDVM 78

Query: 362 KTG 370
           + G
Sbjct: 79  EFG 81


>ERN09426.1 hypothetical protein AMTR_s00029p00062590 [Amborella trichopoda]
          Length = 625

 Score = 68.6 bits (166), Expect = 5e-11
 Identities = 30/61 (49%), Positives = 45/61 (73%)
 Frame = +2

Query: 176 KCYNNTIQDFIKKGLFDPALLMYRRMLCSGIFPDNFSYPYLLKACAHLNDLKAGKILHQS 355
           + +N  I+ FIK GL+  AL+++ +ML SGI PDNF++P++LKACA L DL+ GK +H  
Sbjct: 111 RSWNALIRGFIKHGLYREALILHSQMLGSGIEPDNFTFPFVLKACADLGDLQMGKSIHHQ 170

Query: 356 V 358
           +
Sbjct: 171 I 171


>XP_006847845.2 PREDICTED: pentatricopeptide repeat-containing protein DOT4,
           chloroplastic [Amborella trichopoda]
          Length = 630

 Score = 68.6 bits (166), Expect = 5e-11
 Identities = 30/61 (49%), Positives = 45/61 (73%)
 Frame = +2

Query: 176 KCYNNTIQDFIKKGLFDPALLMYRRMLCSGIFPDNFSYPYLLKACAHLNDLKAGKILHQS 355
           + +N  I+ FIK GL+  AL+++ +ML SGI PDNF++P++LKACA L DL+ GK +H  
Sbjct: 116 RSWNALIRGFIKHGLYREALILHSQMLGSGIEPDNFTFPFVLKACADLGDLQMGKSIHHQ 175

Query: 356 V 358
           +
Sbjct: 176 I 176


>XP_018816431.1 PREDICTED: pentatricopeptide repeat-containing protein At1g11290,
           chloroplastic-like [Juglans regia] XP_018816432.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290, chloroplastic-like [Juglans regia]
           XP_018816433.1 PREDICTED: pentatricopeptide
           repeat-containing protein At1g11290, chloroplastic-like
           [Juglans regia] XP_018816434.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g11290,
           chloroplastic-like [Juglans regia] XP_018816435.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290, chloroplastic-like [Juglans regia]
          Length = 703

 Score = 68.2 bits (165), Expect = 7e-11
 Identities = 28/63 (44%), Positives = 47/63 (74%)
 Frame = +2

Query: 182 YNNTIQDFIKKGLFDPALLMYRRMLCSGIFPDNFSYPYLLKACAHLNDLKAGKILHQSVI 361
           +N  ++ F+  GL++ ++L+YR+ML  GI PDNF+YP++LKAC    DL+ G I+H ++I
Sbjct: 101 WNVMLRGFVDNGLYNRSMLLYRKMLLRGIQPDNFTYPFILKACGCFRDLEFGVIVHGNLI 160

Query: 362 KTG 370
           ++G
Sbjct: 161 ESG 163


>XP_010928525.2 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g05240 [Elaeis guineensis]
          Length = 564

 Score = 67.4 bits (163), Expect = 1e-10
 Identities = 31/66 (46%), Positives = 43/66 (65%)
 Frame = +2

Query: 173 TKCYNNTIQDFIKKGLFDPALLMYRRMLCSGIFPDNFSYPYLLKACAHLNDLKAGKILHQ 352
           T  +N+ I+        + AL MYR MLCSG  PDNF+YP+ LKACA ++D ++G+ +H 
Sbjct: 69  TYIWNSMIRGLSGTDQPEDALSMYRDMLCSGFSPDNFTYPFALKACARISDRRSGRCIHS 128

Query: 353 SVIKTG 370
            V KTG
Sbjct: 129 RVTKTG 134


>XP_010251341.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic [Nelumbo nucifera]
          Length = 695

 Score = 66.2 bits (160), Expect = 3e-10
 Identities = 28/63 (44%), Positives = 44/63 (69%)
 Frame = +2

Query: 182 YNNTIQDFIKKGLFDPALLMYRRMLCSGIFPDNFSYPYLLKACAHLNDLKAGKILHQSVI 361
           +NN I+ F+  GL + AL+ Y +M+  G  P+NF+YP++LKAC+ L  L+ GK+LH  ++
Sbjct: 100 WNNMIRGFVHVGLHEDALIFYYKMINHGSLPNNFTYPFVLKACSELLALEEGKVLHGHIL 159

Query: 362 KTG 370
           K G
Sbjct: 160 KLG 162


>ONK75776.1 uncharacterized protein A4U43_C03F20430 [Asparagus officinalis]
          Length = 539

 Score = 65.9 bits (159), Expect = 4e-10
 Identities = 29/67 (43%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
 Frame = +2

Query: 173 TKCYNNT-IQDFIKKGLFDPALLMYRRMLCSGIFPDNFSYPYLLKACAHLNDLKAGKILH 349
           T C  NT I+ ++ KG +  ++ +YRRML  G++PDN++ PY+LKAC +L+D K G ++H
Sbjct: 87  TLCIQNTMIKAYLLKGEYIKSIEIYRRMLHDGMYPDNYTLPYILKACINLSDAKIGSMVH 146

Query: 350 QSVIKTG 370
             ++K G
Sbjct: 147 THILKFG 153


>ERM99861.1 hypothetical protein AMTR_s00098p00155650 [Amborella trichopoda]
          Length = 520

 Score = 64.7 bits (156), Expect = 1e-09
 Identities = 29/63 (46%), Positives = 41/63 (65%)
 Frame = +2

Query: 182 YNNTIQDFIKKGLFDPALLMYRRMLCSGIFPDNFSYPYLLKACAHLNDLKAGKILHQSVI 361
           YN  I+ F   GL + AL +Y+R+L  G+ PDN +YP ++KACA LN L+AG+ +H   I
Sbjct: 85  YNMMIRGFANNGLSEKALFLYKRLLSQGLKPDNLTYPSVIKACACLNSLQAGRDVHIDAI 144

Query: 362 KTG 370
             G
Sbjct: 145 NNG 147


>KNA03884.1 hypothetical protein SOVF_204900 [Spinacia oleracea]
          Length = 730

 Score = 63.9 bits (154), Expect = 2e-09
 Identities = 29/79 (36%), Positives = 48/79 (60%)
 Frame = +2

Query: 134 HTKNPITNKNAEITKCYNNTIQDFIKKGLFDPALLMYRRMLCSGIFPDNFSYPYLLKACA 313
           H  N I+N N+EI   YN  +Q  +K G F   LL+Y +M+ + ++PD FSY  +L++C 
Sbjct: 85  HVFNSISNPNSEI---YNRVLQILVKSGEFRQTLLLYGKMVSNSMYPDEFSYDSVLRSCK 141

Query: 314 HLNDLKAGKILHQSVIKTG 370
            + D+  G+ +H  ++K G
Sbjct: 142 RVTDVHCGRRVHGRLLKLG 160


>ERN07372.1 hypothetical protein AMTR_s00019p00238380 [Amborella trichopoda]
          Length = 235

 Score = 62.8 bits (151), Expect = 2e-09
 Identities = 25/63 (39%), Positives = 44/63 (69%)
 Frame = +2

Query: 182 YNNTIQDFIKKGLFDPALLMYRRMLCSGIFPDNFSYPYLLKACAHLNDLKAGKILHQSVI 361
           +N  I+ +++ G F  A+  Y +M  +G+ PD+F+YP++LKACA L+++  GK +H  ++
Sbjct: 81  WNIMIKGYVQNGFFHEAIEFYYQMQSNGVIPDHFTYPFVLKACARLSNIAEGKKVHCKLV 140

Query: 362 KTG 370
           KTG
Sbjct: 141 KTG 143


>XP_010245717.1 PREDICTED: pentatricopeptide repeat-containing protein At1g71490
           isoform X2 [Nelumbo nucifera]
          Length = 690

 Score = 63.5 bits (153), Expect = 3e-09
 Identities = 29/63 (46%), Positives = 43/63 (68%)
 Frame = +2

Query: 182 YNNTIQDFIKKGLFDPALLMYRRMLCSGIFPDNFSYPYLLKACAHLNDLKAGKILHQSVI 361
           +N  I  +++ GL   ALL Y++MLC GI  DNF+YP +LKACA  +DL  G+ +H+S+ 
Sbjct: 186 WNLLIAAYVRNGLSKEALLAYKQMLCKGIRADNFTYPSILKACAEESDLGFGREIHRSID 245

Query: 362 KTG 370
            +G
Sbjct: 246 DSG 248


>XP_013749917.1 PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Brassica napus] CDY08404.1 BnaA05g26400D
           [Brassica napus]
          Length = 694

 Score = 63.5 bits (153), Expect = 3e-09
 Identities = 27/63 (42%), Positives = 44/63 (69%)
 Frame = +2

Query: 182 YNNTIQDFIKKGLFDPALLMYRRMLCSGIFPDNFSYPYLLKACAHLNDLKAGKILHQSVI 361
           +N  I  + K  LF  ALLMY +M  +G+ PD+F++P+LLKAC+ L +L+ G+++H  V+
Sbjct: 87  WNAIITGYSKNNLFQDALLMYSKMQLAGVSPDSFTFPHLLKACSGLPNLQMGRLVHAQVL 146

Query: 362 KTG 370
           + G
Sbjct: 147 RLG 149


>XP_018847345.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142 [Juglans regia] XP_018847346.1 PREDICTED:
           putative pentatricopeptide repeat-containing protein
           At3g49142 [Juglans regia] XP_018847347.1 PREDICTED:
           putative pentatricopeptide repeat-containing protein
           At3g49142 [Juglans regia]
          Length = 713

 Score = 63.5 bits (153), Expect = 3e-09
 Identities = 32/79 (40%), Positives = 46/79 (58%)
 Frame = +2

Query: 134 HTKNPITNKNAEITKCYNNTIQDFIKKGLFDPALLMYRRMLCSGIFPDNFSYPYLLKACA 313
           H  N I  KN      +N  I+ ++   L+  ALL+Y+ M   G  PDN++YP +LKAC+
Sbjct: 127 HIFNDIPEKNVVF---FNVMIRSYVNNHLYREALLVYKAMASHGFEPDNYTYPCVLKACS 183

Query: 314 HLNDLKAGKILHQSVIKTG 370
            L DL+ G  +H +VIK G
Sbjct: 184 GLEDLRVGLQIHGAVIKVG 202


>XP_010245708.1 PREDICTED: pentatricopeptide repeat-containing protein At1g71490
           isoform X1 [Nelumbo nucifera] XP_010245709.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g71490
           isoform X1 [Nelumbo nucifera] XP_010245710.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g71490
           isoform X1 [Nelumbo nucifera] XP_010245712.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g71490
           isoform X1 [Nelumbo nucifera] XP_010245713.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g71490
           isoform X1 [Nelumbo nucifera] XP_010245715.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g71490
           isoform X1 [Nelumbo nucifera] XP_019051839.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g71490
           isoform X1 [Nelumbo nucifera]
          Length = 752

 Score = 63.5 bits (153), Expect = 3e-09
 Identities = 29/63 (46%), Positives = 43/63 (68%)
 Frame = +2

Query: 182 YNNTIQDFIKKGLFDPALLMYRRMLCSGIFPDNFSYPYLLKACAHLNDLKAGKILHQSVI 361
           +N  I  +++ GL   ALL Y++MLC GI  DNF+YP +LKACA  +DL  G+ +H+S+ 
Sbjct: 186 WNLLIAAYVRNGLSKEALLAYKQMLCKGIRADNFTYPSILKACAEESDLGFGREIHRSID 245

Query: 362 KTG 370
            +G
Sbjct: 246 DSG 248


>XP_013660502.1 PREDICTED: pentatricopeptide repeat-containing protein
           At1g31920-like [Brassica napus]
          Length = 607

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 29/70 (41%), Positives = 42/70 (60%)
 Frame = +2

Query: 161 NAEITKCYNNTIQDFIKKGLFDPALLMYRRMLCSGIFPDNFSYPYLLKACAHLNDLKAGK 340
           N   T  YN  I+ ++ +  F+ AL +Y  M+  GI PDNF+YP++LKAC  L  ++ GK
Sbjct: 94  NGPCTFDYNTMIRGYVNETSFEEALRVYSEMVEEGIEPDNFTYPFVLKACTRLKSIREGK 153

Query: 341 ILHQSVIKTG 370
            +H  V K G
Sbjct: 154 QIHGHVFKHG 163


>XP_013587367.1 PREDICTED: pentatricopeptide repeat-containing protein At1g31920
           [Brassica oleracea var. oleracea] CDY29923.1
           BnaC05g29130D [Brassica napus]
          Length = 607

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 29/70 (41%), Positives = 42/70 (60%)
 Frame = +2

Query: 161 NAEITKCYNNTIQDFIKKGLFDPALLMYRRMLCSGIFPDNFSYPYLLKACAHLNDLKAGK 340
           N   T  YN  I+ ++ +  F+ AL +Y  M+  GI PDNF+YP++LKAC  L  ++ GK
Sbjct: 94  NGPCTFDYNTMIRGYVNETSFEEALRVYSEMVEEGIEPDNFTYPFVLKACTRLKSIREGK 153

Query: 341 ILHQSVIKTG 370
            +H  V K G
Sbjct: 154 QIHGHVFKHG 163


>XP_015875740.1 PREDICTED: pentatricopeptide repeat-containing protein At1g11290,
           chloroplastic-like [Ziziphus jujuba]
          Length = 706

 Score = 63.2 bits (152), Expect = 4e-09
 Identities = 27/63 (42%), Positives = 44/63 (69%)
 Frame = +2

Query: 182 YNNTIQDFIKKGLFDPALLMYRRMLCSGIFPDNFSYPYLLKACAHLNDLKAGKILHQSVI 361
           +N  I+ F+  GL+D A+ MYR+ML  GI PDNF++P+++KAC    D ++G  L++ V+
Sbjct: 104 WNVMIRGFVDHGLYDRAIFMYRQMLELGIAPDNFTFPFVIKACGCARDFESGVELYRHVV 163

Query: 362 KTG 370
           + G
Sbjct: 164 ENG 166


>GAV79256.1 PPR domain-containing protein/PPR_2 domain-containing
           protein/DYW_deaminase domain-containing protein
           [Cephalotus follicularis]
          Length = 802

 Score = 62.8 bits (151), Expect = 5e-09
 Identities = 32/82 (39%), Positives = 45/82 (54%)
 Frame = +2

Query: 125 HHHHTKNPITNKNAEITKCYNNTIQDFIKKGLFDPALLMYRRMLCSGIFPDNFSYPYLLK 304
           H  + +N     N   T  +N  I+ F   GLF+ A+  Y RM+  GI  DNF+YP+++K
Sbjct: 75  HMGYARNLFEKMNHSDTYIWNMMIRGFCNCGLFEEAIGFYHRMVLEGIETDNFTYPFVIK 134

Query: 305 ACAHLNDLKAGKILHQSVIKTG 370
           ACA L DL  G  +H  + K G
Sbjct: 135 ACAGLWDLIEGGKVHAKLFKVG 156


>XP_011626080.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460 [Amborella trichopoda]
          Length = 525

 Score = 62.4 bits (150), Expect = 7e-09
 Identities = 27/62 (43%), Positives = 41/62 (66%)
 Frame = +2

Query: 185 NNTIQDFIKKGLFDPALLMYRRMLCSGIFPDNFSYPYLLKACAHLNDLKAGKILHQSVIK 364
           N+ I++F   GL +  L +Y  +  SG  PDNF++P++LKAC HLN LK G+ +H  ++K
Sbjct: 45  NSAIREFSVSGLSEKVLDIYVTLRLSGFKPDNFTFPFVLKACGHLNTLKDGQAVHTHILK 104

Query: 365 TG 370
            G
Sbjct: 105 VG 106


>JAU84946.1 Pentatricopeptide repeat-containing protein, partial [Noccaea
           caerulescens]
          Length = 196

 Score = 60.8 bits (146), Expect = 7e-09
 Identities = 28/63 (44%), Positives = 38/63 (60%)
 Frame = +2

Query: 182 YNNTIQDFIKKGLFDPALLMYRRMLCSGIFPDNFSYPYLLKACAHLNDLKAGKILHQSVI 361
           YN  I+ ++ +  F+ AL +Y  M+  GI PDNF+YP LLKAC  L  +  GK +H  V 
Sbjct: 102 YNTMIRGYVNETSFEEALCVYTEMIEEGIDPDNFTYPCLLKACTRLKSIGEGKQIHGHVF 161

Query: 362 KTG 370
           K G
Sbjct: 162 KLG 164