BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00017478
         (285 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010250838.1 PREDICTED: DNA polymerase alpha subunit B isoform...    90   6e-19
XP_010250837.1 PREDICTED: DNA polymerase alpha subunit B isoform...    90   6e-19
XP_016514768.1 PREDICTED: DNA polymerase alpha subunit B-like [N...    82   4e-18
XP_010682864.1 PREDICTED: DNA polymerase alpha subunit B [Beta v...    87   5e-18
OAY71795.1 DNA polymerase alpha subunit B [Ananas comosus]             87   5e-18
XP_020107295.1 DNA polymerase alpha subunit B [Ananas comosus]         86   2e-17
XP_002438164.1 hypothetical protein SORBIDRAFT_10g009040 [Sorghu...    86   2e-17
AQK40134.1 DNA polymerase alpha 2 [Zea mays]                           85   2e-17
KNA16145.1 hypothetical protein SOVF_091810 [Spinacia oleracea]        85   3e-17
AQK40131.1 DNA polymerase alpha 2 [Zea mays]                           85   3e-17
AQK40133.1 DNA polymerase alpha 2 [Zea mays]                           85   3e-17
XP_008792220.1 PREDICTED: DNA polymerase alpha subunit B [Phoeni...    85   3e-17
XP_009392606.1 PREDICTED: DNA polymerase alpha subunit B [Musa a...    85   3e-17
XP_008452343.1 PREDICTED: DNA polymerase alpha subunit B [Cucumi...    85   3e-17
XP_004137446.1 PREDICTED: DNA polymerase alpha subunit B [Cucumi...    85   3e-17
NP_001130410.1 uncharacterized protein LOC100191506 [Zea mays] A...    85   3e-17
KGN64070.1 hypothetical protein Csa_1G039840 [Cucumis sativus]         85   3e-17
XP_010930061.1 PREDICTED: DNA polymerase alpha subunit B [Elaeis...    85   4e-17
KMZ72762.1 DNA polymerase alpha subunit B [Zostera marina]             85   4e-17
XP_004960699.1 PREDICTED: DNA polymerase alpha subunit B [Setari...    85   4e-17

>XP_010250838.1 PREDICTED: DNA polymerase alpha subunit B isoform X2 [Nelumbo
           nucifera]
          Length = 624

 Score = 89.7 bits (221), Expect = 6e-19
 Identities = 49/90 (54%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
 Frame = -2

Query: 284 PAASGVPLDLCASPEALDILVAPDILILTSDLAPFAKVLQLGEDLKTNEN-KCVSINPGR 108
           P A GVPLDL   PEAL I   PDIL+L SDLAPF KVL  G+ +   E  KC+ INPGR
Sbjct: 536 PPAEGVPLDLSLVPEALQIPSVPDILVLPSDLAPFVKVLPFGQRMNEEEQVKCICINPGR 595

Query: 107 LAKGASGGTFAEILIQEREQSYNQNENLTS 18
           LAKG  GGTF E+       +Y+ N + TS
Sbjct: 596 LAKGVGGGTFVEL-------NYHGNADRTS 618


>XP_010250837.1 PREDICTED: DNA polymerase alpha subunit B isoform X1 [Nelumbo
           nucifera]
          Length = 625

 Score = 89.7 bits (221), Expect = 6e-19
 Identities = 49/90 (54%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
 Frame = -2

Query: 284 PAASGVPLDLCASPEALDILVAPDILILTSDLAPFAKVLQLGEDLKTNEN-KCVSINPGR 108
           P A GVPLDL   PEAL I   PDIL+L SDLAPF KVL  G+ +   E  KC+ INPGR
Sbjct: 537 PPAEGVPLDLSLVPEALQIPSVPDILVLPSDLAPFVKVLPFGQRMNEEEQVKCICINPGR 596

Query: 107 LAKGASGGTFAEILIQEREQSYNQNENLTS 18
           LAKG  GGTF E+       +Y+ N + TS
Sbjct: 597 LAKGVGGGTFVEL-------NYHGNADRTS 619


>XP_016514768.1 PREDICTED: DNA polymerase alpha subunit B-like [Nicotiana tabacum]
          Length = 116

 Score = 81.6 bits (200), Expect = 4e-18
 Identities = 37/72 (51%), Positives = 49/72 (68%)
 Frame = -2

Query: 284 PAASGVPLDLCASPEALDILVAPDILILTSDLAPFAKVLQLGEDLKTNENKCVSINPGRL 105
           P A G+P+D   +PEAL +   PDILIL SDLA F +V+ LGE  +  E KC+ +NPGRL
Sbjct: 29  PPAEGIPIDYSLAPEALQMSTVPDILILPSDLAHFVRVISLGERSEEEEVKCICVNPGRL 88

Query: 104 AKGASGGTFAEI 69
           ++G  GG F E+
Sbjct: 89  SRGEGGGFFVEL 100


>XP_010682864.1 PREDICTED: DNA polymerase alpha subunit B [Beta vulgaris subsp.
           vulgaris] KMT07540.1 hypothetical protein BVRB_6g151510
           [Beta vulgaris subsp. vulgaris]
          Length = 613

 Score = 87.0 bits (214), Expect = 5e-18
 Identities = 45/81 (55%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
 Frame = -2

Query: 284 PAASGVPLDLCASPEALDILVAPDILILTSDLAPFAKVLQLGEDLKTNEN-KCVSINPGR 108
           P A  VPLD   +PEAL I   P ILIL SDLAPFAKVL L  + +  EN KC+ +NPGR
Sbjct: 525 PPADSVPLDFSIAPEALSISSIPHILILPSDLAPFAKVLSLNAEAEEQENVKCLCVNPGR 584

Query: 107 LAKGASGGTFAEILIQEREQS 45
           LAKG  GGTF E+   E  ++
Sbjct: 585 LAKGIGGGTFVELYYHESPET 605


>OAY71795.1 DNA polymerase alpha subunit B [Ananas comosus]
          Length = 647

 Score = 87.0 bits (214), Expect = 5e-18
 Identities = 43/82 (52%), Positives = 56/82 (68%)
 Frame = -2

Query: 284 PAASGVPLDLCASPEALDILVAPDILILTSDLAPFAKVLQLGEDLKTNENKCVSINPGRL 105
           P A GVPLD   +PEAL+IL +PD+L+L SDLAPF K+L + E     E +C+ +NPGRL
Sbjct: 561 PPAVGVPLDFSLAPEALEILPSPDVLLLPSDLAPFIKLLSVREG-NEEEKRCMCVNPGRL 619

Query: 104 AKGASGGTFAEILIQEREQSYN 39
           AKG  GGTF E+  +E   + N
Sbjct: 620 AKGIGGGTFVELYYREDVDNTN 641


>XP_020107295.1 DNA polymerase alpha subunit B [Ananas comosus]
          Length = 618

 Score = 85.5 bits (210), Expect = 2e-17
 Identities = 43/82 (52%), Positives = 55/82 (67%)
 Frame = -2

Query: 284 PAASGVPLDLCASPEALDILVAPDILILTSDLAPFAKVLQLGEDLKTNENKCVSINPGRL 105
           P A GVPLD   +PEAL+IL +PD+L+L SDLAPF K+L + E     E +C+ +NPGRL
Sbjct: 532 PPAVGVPLDFSLAPEALEILPSPDVLLLPSDLAPFIKLLSVREG-NEEEKRCMCVNPGRL 590

Query: 104 AKGASGGTFAEILIQEREQSYN 39
           AKG  GGTF E+   E   + N
Sbjct: 591 AKGIGGGTFVELYYCEDVDNTN 612


>XP_002438164.1 hypothetical protein SORBIDRAFT_10g009040 [Sorghum bicolor]
           EER89531.1 hypothetical protein SORBI_010G103700
           [Sorghum bicolor]
          Length = 626

 Score = 85.5 bits (210), Expect = 2e-17
 Identities = 42/76 (55%), Positives = 54/76 (71%)
 Frame = -2

Query: 284 PAASGVPLDLCASPEALDILVAPDILILTSDLAPFAKVLQLGEDLKTNENKCVSINPGRL 105
           P+A+GVPLD   + EAL+I  APD+L+L SDLAPF KVL LGE    ++ + + +NPGRL
Sbjct: 540 PSAAGVPLDFSLAKEALEISSAPDVLLLPSDLAPFVKVLSLGEG-SDDQKRFICVNPGRL 598

Query: 104 AKGASGGTFAEILIQE 57
           AKG  GGTF E+   E
Sbjct: 599 AKGIGGGTFVELYYNE 614


>AQK40134.1 DNA polymerase alpha 2 [Zea mays]
          Length = 527

 Score = 85.1 bits (209), Expect = 2e-17
 Identities = 43/76 (56%), Positives = 53/76 (69%)
 Frame = -2

Query: 284 PAASGVPLDLCASPEALDILVAPDILILTSDLAPFAKVLQLGEDLKTNENKCVSINPGRL 105
           P A GVPLDL  + EAL+I  APD+L+L SDLAPF KVL LGE    ++ + + +NPGRL
Sbjct: 441 PPAPGVPLDLSLAKEALEIPSAPDVLLLPSDLAPFVKVLSLGEG-SDDDRRFICVNPGRL 499

Query: 104 AKGASGGTFAEILIQE 57
           AKG  GGTF E+   E
Sbjct: 500 AKGIGGGTFVELYYNE 515


>KNA16145.1 hypothetical protein SOVF_091810 [Spinacia oleracea]
          Length = 555

 Score = 85.1 bits (209), Expect = 3e-17
 Identities = 43/73 (58%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
 Frame = -2

Query: 284 PAASGVPLDLCASPEALDILVAPDILILTSDLAPFAKVLQLGEDLKTNEN-KCVSINPGR 108
           P A  VPLD   +PEAL+I   P ILIL SDLAPF KVL L E+++  E  KC+ +NPGR
Sbjct: 467 PQAESVPLDFSIAPEALNISSIPHILILPSDLAPFVKVLSLNEEIEEQERVKCLCVNPGR 526

Query: 107 LAKGASGGTFAEI 69
           LAKG  GGTF E+
Sbjct: 527 LAKGIGGGTFLEL 539


>AQK40131.1 DNA polymerase alpha 2 [Zea mays]
          Length = 582

 Score = 85.1 bits (209), Expect = 3e-17
 Identities = 43/76 (56%), Positives = 53/76 (69%)
 Frame = -2

Query: 284 PAASGVPLDLCASPEALDILVAPDILILTSDLAPFAKVLQLGEDLKTNENKCVSINPGRL 105
           P A GVPLDL  + EAL+I  APD+L+L SDLAPF KVL LGE    ++ + + +NPGRL
Sbjct: 496 PPAPGVPLDLSLAKEALEIPSAPDVLLLPSDLAPFVKVLSLGEG-SDDDRRFICVNPGRL 554

Query: 104 AKGASGGTFAEILIQE 57
           AKG  GGTF E+   E
Sbjct: 555 AKGIGGGTFVELYYNE 570


>AQK40133.1 DNA polymerase alpha 2 [Zea mays]
          Length = 619

 Score = 85.1 bits (209), Expect = 3e-17
 Identities = 43/76 (56%), Positives = 53/76 (69%)
 Frame = -2

Query: 284 PAASGVPLDLCASPEALDILVAPDILILTSDLAPFAKVLQLGEDLKTNENKCVSINPGRL 105
           P A GVPLDL  + EAL+I  APD+L+L SDLAPF KVL LGE    ++ + + +NPGRL
Sbjct: 533 PPAPGVPLDLSLAKEALEIPSAPDVLLLPSDLAPFVKVLSLGEG-SDDDRRFICVNPGRL 591

Query: 104 AKGASGGTFAEILIQE 57
           AKG  GGTF E+   E
Sbjct: 592 AKGIGGGTFVELYYNE 607


>XP_008792220.1 PREDICTED: DNA polymerase alpha subunit B [Phoenix dactylifera]
          Length = 620

 Score = 85.1 bits (209), Expect = 3e-17
 Identities = 43/72 (59%), Positives = 51/72 (70%)
 Frame = -2

Query: 284 PAASGVPLDLCASPEALDILVAPDILILTSDLAPFAKVLQLGEDLKTNENKCVSINPGRL 105
           P + GVPLDL  +PEAL+I   PD+L+L SDLAPF KVL LG D      +C+ +NPGRL
Sbjct: 534 PPSGGVPLDLSLAPEALEIPSIPDLLLLPSDLAPFVKVLSLGGD-DREAIRCMCVNPGRL 592

Query: 104 AKGASGGTFAEI 69
           AKG  GGTF EI
Sbjct: 593 AKGIGGGTFVEI 604


>XP_009392606.1 PREDICTED: DNA polymerase alpha subunit B [Musa acuminata subsp.
           malaccensis]
          Length = 621

 Score = 85.1 bits (209), Expect = 3e-17
 Identities = 43/82 (52%), Positives = 52/82 (63%)
 Frame = -2

Query: 284 PAASGVPLDLCASPEALDILVAPDILILTSDLAPFAKVLQLGEDLKTNENKCVSINPGRL 105
           P + GVPLDL  +PEALDI + PDILIL SDL+PF K L   E+      KC+ +NPGRL
Sbjct: 534 PPSLGVPLDLSLAPEALDIPLIPDILILPSDLSPFVKALSHKENDAEAATKCMCVNPGRL 593

Query: 104 AKGASGGTFAEILIQEREQSYN 39
           AKG  GGTF E+      +  N
Sbjct: 594 AKGIGGGTFVELHYNSEPEKSN 615


>XP_008452343.1 PREDICTED: DNA polymerase alpha subunit B [Cucumis melo]
           XP_008452395.1 PREDICTED: DNA polymerase alpha subunit B
           [Cucumis melo] XP_008452468.1 PREDICTED: DNA polymerase
           alpha subunit B [Cucumis melo] XP_008452549.1 PREDICTED:
           DNA polymerase alpha subunit B [Cucumis melo]
           XP_008452631.1 PREDICTED: DNA polymerase alpha subunit B
           [Cucumis melo]
          Length = 622

 Score = 85.1 bits (209), Expect = 3e-17
 Identities = 43/73 (58%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
 Frame = -2

Query: 284 PAASGVPLDLCASPEALDILVAPDILILTSDLAPFAKVLQLGEDLKTNEN-KCVSINPGR 108
           P A GVPLD   +P+ALDI V PDILIL SD+  F KV+ LGE     E  +CV +NPGR
Sbjct: 534 PPAEGVPLDFSLAPQALDISVIPDILILPSDMKHFVKVISLGEGGSEEEQARCVCVNPGR 593

Query: 107 LAKGASGGTFAEI 69
           LAKG  GGTF E+
Sbjct: 594 LAKGEGGGTFVEL 606


>XP_004137446.1 PREDICTED: DNA polymerase alpha subunit B [Cucumis sativus]
           XP_011650247.1 PREDICTED: DNA polymerase alpha subunit B
           [Cucumis sativus] XP_011650259.1 PREDICTED: DNA
           polymerase alpha subunit B [Cucumis sativus]
          Length = 622

 Score = 85.1 bits (209), Expect = 3e-17
 Identities = 43/73 (58%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
 Frame = -2

Query: 284 PAASGVPLDLCASPEALDILVAPDILILTSDLAPFAKVLQLGEDLKTNEN-KCVSINPGR 108
           P A GVPLD   +P+ALDI V PDILIL SD+  F KV+ LGE     E  +CV +NPGR
Sbjct: 534 PPAEGVPLDFSLAPQALDISVIPDILILPSDMKHFVKVISLGEGGSEEEQARCVCVNPGR 593

Query: 107 LAKGASGGTFAEI 69
           LAKG  GGTF E+
Sbjct: 594 LAKGEGGGTFVEL 606


>NP_001130410.1 uncharacterized protein LOC100191506 [Zea mays] ACF78609.1 unknown
           [Zea mays] AQK40136.1 DNA polymerase alpha 2 [Zea mays]
          Length = 626

 Score = 85.1 bits (209), Expect = 3e-17
 Identities = 43/76 (56%), Positives = 53/76 (69%)
 Frame = -2

Query: 284 PAASGVPLDLCASPEALDILVAPDILILTSDLAPFAKVLQLGEDLKTNENKCVSINPGRL 105
           P A GVPLDL  + EAL+I  APD+L+L SDLAPF KVL LGE    ++ + + +NPGRL
Sbjct: 540 PPAPGVPLDLSLAKEALEIPSAPDVLLLPSDLAPFVKVLSLGEG-SDDDRRFICVNPGRL 598

Query: 104 AKGASGGTFAEILIQE 57
           AKG  GGTF E+   E
Sbjct: 599 AKGIGGGTFVELYYNE 614


>KGN64070.1 hypothetical protein Csa_1G039840 [Cucumis sativus]
          Length = 739

 Score = 85.1 bits (209), Expect = 3e-17
 Identities = 43/73 (58%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
 Frame = -2

Query: 284 PAASGVPLDLCASPEALDILVAPDILILTSDLAPFAKVLQLGEDLKTNEN-KCVSINPGR 108
           P A GVPLD   +P+ALDI V PDILIL SD+  F KV+ LGE     E  +CV +NPGR
Sbjct: 651 PPAEGVPLDFSLAPQALDISVIPDILILPSDMKHFVKVISLGEGGSEEEQARCVCVNPGR 710

Query: 107 LAKGASGGTFAEI 69
           LAKG  GGTF E+
Sbjct: 711 LAKGEGGGTFVEL 723


>XP_010930061.1 PREDICTED: DNA polymerase alpha subunit B [Elaeis guineensis]
          Length = 620

 Score = 84.7 bits (208), Expect = 4e-17
 Identities = 43/72 (59%), Positives = 51/72 (70%)
 Frame = -2

Query: 284 PAASGVPLDLCASPEALDILVAPDILILTSDLAPFAKVLQLGEDLKTNENKCVSINPGRL 105
           P + GVPLDL  +PEAL+I   PD+L+L SDLAPF KVL LG D      +C+ +NPGRL
Sbjct: 534 PPSVGVPLDLSLAPEALEIPSIPDVLLLPSDLAPFVKVLSLGGD-DREAIRCMCVNPGRL 592

Query: 104 AKGASGGTFAEI 69
           AKG  GGTF EI
Sbjct: 593 AKGIGGGTFVEI 604


>KMZ72762.1 DNA polymerase alpha subunit B [Zostera marina]
          Length = 625

 Score = 84.7 bits (208), Expect = 4e-17
 Identities = 41/73 (56%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
 Frame = -2

Query: 284 PAASGVPLDLCASPEALDILVAPDILILTSDLAPFAKVLQLGEDLKTNE-NKCVSINPGR 108
           P ++ VPLDL  +P+AL+I   PDIL+L SDLAPFAK + +GE ++  E +KC+ +NPGR
Sbjct: 537 PPSTAVPLDLSLAPKALEIPSVPDILLLPSDLAPFAKRVPVGETIQVEEASKCMCVNPGR 596

Query: 107 LAKGASGGTFAEI 69
           LAKG  GG+FAE+
Sbjct: 597 LAKGIGGGSFAEM 609


>XP_004960699.1 PREDICTED: DNA polymerase alpha subunit B [Setaria italica]
           KQL13617.1 hypothetical protein SETIT_021465mg [Setaria
           italica]
          Length = 627

 Score = 84.7 bits (208), Expect = 4e-17
 Identities = 43/76 (56%), Positives = 53/76 (69%)
 Frame = -2

Query: 284 PAASGVPLDLCASPEALDILVAPDILILTSDLAPFAKVLQLGEDLKTNENKCVSINPGRL 105
           P A+GVPLD   + EAL+I  APD+L+LTSDLAPF KVL LGE     + + + +NPGRL
Sbjct: 541 PPAAGVPLDFSLAKEALEISSAPDVLLLTSDLAPFVKVLSLGEGSDV-QKQFICMNPGRL 599

Query: 104 AKGASGGTFAEILIQE 57
           AKG  GGTF E+   E
Sbjct: 600 AKGIGGGTFVELYYNE 615