BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00017369
         (314 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZV56298.1 hypothetical protein F511_00295 [Dorcoceras hygrometr...    77   3e-17
XP_003376336.1 retrovirus-related Pol polyprotein from transposo...    74   1e-16
KRY26802.1 Retrovirus-related Pol polyprotein from transposon TN...    74   2e-16
XP_003376808.1 retrovirus-related Pol polyprotein from transposo...    74   2e-16
KRX42725.1 Retrovirus-related Pol polyprotein from transposon TN...    73   2e-16
KYP40337.1 Retrovirus-related Pol polyprotein from transposon TN...    76   2e-16
KRY26801.1 Retrovirus-related Pol polyprotein from transposon TN...    74   2e-16
KRY86576.1 Retrovirus-related Pol polyprotein from transposon TN...    74   2e-16
KRY01876.1 Retrovirus-related Pol polyprotein from transposon TN...    74   2e-16
KRX69161.1 26S protease regulatory subunit 8 [Trichinella sp. T6]      73   2e-16
KRX69160.1 26S protease regulatory subunit 8 [Trichinella sp. T6]      73   2e-16
KRX33413.1 Retrovirus-related Pol polyprotein from transposon TN...    73   2e-16
KYP76436.1 Retrovirus-related Pol polyprotein from transposon TN...    76   2e-16
KRX33198.1 Retrovirus-related Pol polyprotein from transposon TN...    73   2e-16
KRX30474.1 Retrovirus-related Pol polyprotein from transposon TN...    73   2e-16
P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from t...    79   2e-16
KYP40338.1 Retrovirus-related Pol polyprotein from transposon TN...    76   2e-16
KMQ86193.1 gag-pol polyprotein [Lasius niger]                          83   3e-16
KRX55804.1 Retrovirus-related Pol polyprotein from transposon TN...    72   3e-16
KRZ33483.1 Retrovirus-related Pol polyprotein from transposon TN...    72   5e-16

>KZV56298.1 hypothetical protein F511_00295 [Dorcoceras hygrometricum]
          Length = 1309

 Score = 76.6 bits (187), Expect(2) = 3e-17
 Identities = 35/71 (49%), Positives = 51/71 (71%)
 Frame = +1

Query: 1   GLSYIVTFIDEFSRKS*IDPIKSKDTVLETFKDFVARVETQTGLRIKRLVSDNGGEYTST 180
           G  Y ++ ID++SRK  +  +KSKD   + FKD+   VETQTG +IK+L +DNG EY ST
Sbjct: 489 GARYYISVIDDYSRKLWVVTLKSKDEAFKAFKDWKMMVETQTGKKIKKLRTDNGLEYCST 548

Query: 181 AFKEFCREKGM 213
            FK+FC+++G+
Sbjct: 549 EFKDFCKQEGI 559



 Score = 38.9 bits (89), Expect(2) = 3e-17
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = +3

Query: 222 TVPGMPQQNGIAEGYNRILLDRA*CML 302
           TVP  PQQNG+AE  NR +L+R  CML
Sbjct: 564 TVPNTPQQNGLAERMNRTILERVRCML 590


>XP_003376336.1 retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trichinella spiralis] EFV58419.1 retrovirus-related Pol
           polyprotein from transposon TNT 1-94 [Trichinella
           spiralis]
          Length = 1003

 Score = 74.3 bits (181), Expect(2) = 1e-16
 Identities = 37/73 (50%), Positives = 48/73 (65%)
 Frame = +1

Query: 1   GLSYIVTFIDEFSRKS*IDPIKSKDTVLETFKDFVARVETQTGLRIKRLVSDNGGEYTST 180
           G  Y ++FID+FSRKS +  +K K+ VL  FKDF+A VE QT  R+K L +DNG EY + 
Sbjct: 193 GARYFLSFIDDFSRKSFVYFLKHKNEVLSKFKDFIAMVERQTSKRVKCLRTDNGREYVNN 252

Query: 181 AFKEFCREKGMTH 219
            F EF   KG+ H
Sbjct: 253 MFAEFLVRKGIRH 265



 Score = 38.9 bits (89), Expect(2) = 1e-16
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 222 TVPGMPQQNGIAEGYNRILLDRA*CMLLSAN 314
           T+P  PQQNG+AE  NR L+++A  ML+ AN
Sbjct: 268 TIPETPQQNGVAERMNRTLVEKARTMLIDAN 298


>KRY26802.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trichinella spiralis]
          Length = 1324

 Score = 73.9 bits (180), Expect(2) = 2e-16
 Identities = 37/73 (50%), Positives = 48/73 (65%)
 Frame = +1

Query: 1   GLSYIVTFIDEFSRKS*IDPIKSKDTVLETFKDFVARVETQTGLRIKRLVSDNGGEYTST 180
           G  Y ++FID+FSRKS +  +K K+ VL  FKDF+A VE QT  R+K L +DNG EY + 
Sbjct: 500 GARYFLSFIDDFSRKSFVYFLKHKNEVLPKFKDFIAMVERQTSKRVKCLRTDNGREYVNN 559

Query: 181 AFKEFCREKGMTH 219
            F EF   KG+ H
Sbjct: 560 MFAEFLVRKGIRH 572



 Score = 38.9 bits (89), Expect(2) = 2e-16
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 222 TVPGMPQQNGIAEGYNRILLDRA*CMLLSAN 314
           T+P  PQQNG+AE  NR L+++A  ML+ AN
Sbjct: 575 TIPETPQQNGVAERMNRTLVEKARTMLIDAN 605


>XP_003376808.1 retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trichinella spiralis] EFV57947.1 retrovirus-related Pol
           polyprotein from transposon TNT 1-94 [Trichinella
           spiralis]
          Length = 1324

 Score = 73.9 bits (180), Expect(2) = 2e-16
 Identities = 37/73 (50%), Positives = 48/73 (65%)
 Frame = +1

Query: 1   GLSYIVTFIDEFSRKS*IDPIKSKDTVLETFKDFVARVETQTGLRIKRLVSDNGGEYTST 180
           G  Y ++FID+FSRKS +  +K K+ VL  FKDF+A VE QT  R+K L +DNG EY + 
Sbjct: 500 GARYFLSFIDDFSRKSFVYFLKHKNEVLPKFKDFIAMVERQTSKRVKCLRTDNGREYVNN 559

Query: 181 AFKEFCREKGMTH 219
            F EF   KG+ H
Sbjct: 560 MFAEFLVRKGIRH 572



 Score = 38.9 bits (89), Expect(2) = 2e-16
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 222 TVPGMPQQNGIAEGYNRILLDRA*CMLLSAN 314
           T+P  PQQNG+AE  NR L+++A  ML+ AN
Sbjct: 575 TIPETPQQNGVAERMNRTLVEKARTMLIDAN 605


>KRX42725.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trichinella murrelli]
          Length = 1324

 Score = 73.2 bits (178), Expect(2) = 2e-16
 Identities = 36/73 (49%), Positives = 47/73 (64%)
 Frame = +1

Query: 1   GLSYIVTFIDEFSRKS*IDPIKSKDTVLETFKDFVARVETQTGLRIKRLVSDNGGEYTST 180
           G  Y ++FID+FSRKS +  +K K+  L  FKDF+A VE QT  R+K L +DNG EY + 
Sbjct: 500 GARYFLSFIDDFSRKSFVYFLKHKNEALPKFKDFIAMVERQTSKRVKCLRTDNGREYVNN 559

Query: 181 AFKEFCREKGMTH 219
            F EF   KG+ H
Sbjct: 560 MFAEFLMRKGIRH 572



 Score = 39.7 bits (91), Expect(2) = 2e-16
 Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +3

Query: 195 LQRKG-DDTLTVPGMPQQNGIAEGYNRILLDRA*CMLLSAN 314
           L RKG     T+P  PQQNG+AE  NR L+++A  ML+ AN
Sbjct: 565 LMRKGIRHERTIPETPQQNGVAERMNRTLVEKARTMLIDAN 605


>KYP40337.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1269

 Score = 75.9 bits (185), Expect(2) = 2e-16
 Identities = 38/71 (53%), Positives = 47/71 (66%)
 Frame = +1

Query: 1   GLSYIVTFIDEFSRKS*IDPIKSKDTVLETFKDFVARVETQTGLRIKRLVSDNGGEYTST 180
           G  Y VTFID+ SRK  +  +K K  V E FK + A VE +TGL+IK+L +DNGGEY  T
Sbjct: 466 GKQYFVTFIDDHSRKVWVYFLKHKSEVFEAFKMWKAMVENETGLKIKKLRTDNGGEYEDT 525

Query: 181 AFKEFCREKGM 213
            FK FC E G+
Sbjct: 526 RFKRFCYEHGI 536



 Score = 37.0 bits (84), Expect(2) = 2e-16
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = +3

Query: 222 TVPGMPQQNGIAEGYNRILLDRA*CMLLSA 311
           TVPG PQQNG+AE  NR L +RA  M + +
Sbjct: 541 TVPGTPQQNGVAERMNRTLTERARSMRMQS 570


>KRY26801.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trichinella spiralis]
          Length = 1231

 Score = 73.9 bits (180), Expect(2) = 2e-16
 Identities = 37/73 (50%), Positives = 48/73 (65%)
 Frame = +1

Query: 1   GLSYIVTFIDEFSRKS*IDPIKSKDTVLETFKDFVARVETQTGLRIKRLVSDNGGEYTST 180
           G  Y ++FID+FSRKS +  +K K+ VL  FKDF+A VE QT  R+K L +DNG EY + 
Sbjct: 407 GARYFLSFIDDFSRKSFVYFLKHKNEVLPKFKDFIAMVERQTSKRVKCLRTDNGREYVNN 466

Query: 181 AFKEFCREKGMTH 219
            F EF   KG+ H
Sbjct: 467 MFAEFLVRKGIRH 479



 Score = 38.9 bits (89), Expect(2) = 2e-16
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 222 TVPGMPQQNGIAEGYNRILLDRA*CMLLSAN 314
           T+P  PQQNG+AE  NR L+++A  ML+ AN
Sbjct: 482 TIPETPQQNGVAERMNRTLVEKARTMLIDAN 512


>KRY86576.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trichinella pseudospiralis]
          Length = 1215

 Score = 73.9 bits (180), Expect(2) = 2e-16
 Identities = 37/73 (50%), Positives = 48/73 (65%)
 Frame = +1

Query: 1   GLSYIVTFIDEFSRKS*IDPIKSKDTVLETFKDFVARVETQTGLRIKRLVSDNGGEYTST 180
           G  Y ++FID+FSRKS +  +K K+ VL  FKDF+A VE QT  R+K L +DNG EY + 
Sbjct: 500 GARYFLSFIDDFSRKSFVYFLKHKNEVLPKFKDFIAMVERQTSKRVKCLRTDNGREYVNN 559

Query: 181 AFKEFCREKGMTH 219
            F EF   KG+ H
Sbjct: 560 MFAEFLVRKGIRH 572



 Score = 38.9 bits (89), Expect(2) = 2e-16
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 222 TVPGMPQQNGIAEGYNRILLDRA*CMLLSAN 314
           T+P  PQQNG+AE  NR L+++A  ML+ AN
Sbjct: 575 TIPETPQQNGVAERMNRTLVEKARTMLIDAN 605


>KRY01876.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trichinella pseudospiralis]
          Length = 1158

 Score = 73.9 bits (180), Expect(2) = 2e-16
 Identities = 37/73 (50%), Positives = 48/73 (65%)
 Frame = +1

Query: 1   GLSYIVTFIDEFSRKS*IDPIKSKDTVLETFKDFVARVETQTGLRIKRLVSDNGGEYTST 180
           G  Y ++FID+FSRKS +  +K K+ VL  FKDF+A VE QT  R+K L +DNG EY + 
Sbjct: 334 GARYFLSFIDDFSRKSFVYFLKHKNEVLPKFKDFIAMVERQTSKRVKCLRTDNGREYVNN 393

Query: 181 AFKEFCREKGMTH 219
            F EF   KG+ H
Sbjct: 394 MFAEFLVRKGIRH 406



 Score = 38.9 bits (89), Expect(2) = 2e-16
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 222 TVPGMPQQNGIAEGYNRILLDRA*CMLLSAN 314
           T+P  PQQNG+AE  NR L+++A  ML+ AN
Sbjct: 409 TIPETPQQNGVAERMNRTLVEKARTMLIDAN 439


>KRX69161.1 26S protease regulatory subunit 8 [Trichinella sp. T6]
          Length = 1140

 Score = 73.2 bits (178), Expect(2) = 2e-16
 Identities = 36/73 (49%), Positives = 47/73 (64%)
 Frame = +1

Query: 1   GLSYIVTFIDEFSRKS*IDPIKSKDTVLETFKDFVARVETQTGLRIKRLVSDNGGEYTST 180
           G  Y ++FID+FSRKS +  +K K+  L  FKDF+A VE QT  R+K L +DNG EY + 
Sbjct: 8   GARYFLSFIDDFSRKSFVYFLKHKNEALPKFKDFIAMVERQTSKRVKCLRTDNGREYVNN 67

Query: 181 AFKEFCREKGMTH 219
            F EF   KG+ H
Sbjct: 68  MFAEFLMRKGIRH 80



 Score = 39.7 bits (91), Expect(2) = 2e-16
 Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +3

Query: 195 LQRKG-DDTLTVPGMPQQNGIAEGYNRILLDRA*CMLLSAN 314
           L RKG     T+P  PQQNG+AE  NR L+++A  ML+ AN
Sbjct: 73  LMRKGIRHERTIPETPQQNGVAERMNRTLVEKARTMLIDAN 113


>KRX69160.1 26S protease regulatory subunit 8 [Trichinella sp. T6]
          Length = 1121

 Score = 73.2 bits (178), Expect(2) = 2e-16
 Identities = 36/73 (49%), Positives = 47/73 (64%)
 Frame = +1

Query: 1   GLSYIVTFIDEFSRKS*IDPIKSKDTVLETFKDFVARVETQTGLRIKRLVSDNGGEYTST 180
           G  Y ++FID+FSRKS +  +K K+  L  FKDF+A VE QT  R+K L +DNG EY + 
Sbjct: 8   GARYFLSFIDDFSRKSFVYFLKHKNEALPKFKDFIAMVERQTSKRVKCLRTDNGREYVNN 67

Query: 181 AFKEFCREKGMTH 219
            F EF   KG+ H
Sbjct: 68  MFAEFLMRKGIRH 80



 Score = 39.7 bits (91), Expect(2) = 2e-16
 Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +3

Query: 195 LQRKG-DDTLTVPGMPQQNGIAEGYNRILLDRA*CMLLSAN 314
           L RKG     T+P  PQQNG+AE  NR L+++A  ML+ AN
Sbjct: 73  LMRKGIRHERTIPETPQQNGVAERMNRTLVEKARTMLIDAN 113


>KRX33413.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trichinella murrelli]
          Length = 1058

 Score = 73.2 bits (178), Expect(2) = 2e-16
 Identities = 36/73 (49%), Positives = 47/73 (64%)
 Frame = +1

Query: 1   GLSYIVTFIDEFSRKS*IDPIKSKDTVLETFKDFVARVETQTGLRIKRLVSDNGGEYTST 180
           G  Y ++FID+FSRKS +  +K K+  L  FKDF+A VE QT  R+K L +DNG EY + 
Sbjct: 500 GARYFLSFIDDFSRKSFVYFLKHKNEALPKFKDFIAMVERQTSKRVKCLRTDNGREYVNN 559

Query: 181 AFKEFCREKGMTH 219
            F EF   KG+ H
Sbjct: 560 MFAEFLMRKGIRH 572



 Score = 39.7 bits (91), Expect(2) = 2e-16
 Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +3

Query: 195 LQRKG-DDTLTVPGMPQQNGIAEGYNRILLDRA*CMLLSAN 314
           L RKG     T+P  PQQNG+AE  NR L+++A  ML+ AN
Sbjct: 565 LMRKGIRHERTIPETPQQNGVAERMNRTLVEKARTMLIDAN 605


>KYP76436.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 760

 Score = 75.9 bits (185), Expect(2) = 2e-16
 Identities = 38/71 (53%), Positives = 47/71 (66%)
 Frame = +1

Query: 1   GLSYIVTFIDEFSRKS*IDPIKSKDTVLETFKDFVARVETQTGLRIKRLVSDNGGEYTST 180
           G  Y VTFID+ SRK  +  +K K  V E FK + A VE +TGL+IK+L +DNGGEY  T
Sbjct: 443 GKQYFVTFIDDHSRKVWVYFLKHKSEVFEAFKMWKAMVENETGLKIKKLRTDNGGEYEDT 502

Query: 181 AFKEFCREKGM 213
            FK FC E G+
Sbjct: 503 RFKRFCYEHGI 513



 Score = 37.0 bits (84), Expect(2) = 2e-16
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = +3

Query: 222 TVPGMPQQNGIAEGYNRILLDRA*CMLLSA 311
           TVPG PQQNG+AE  NR L +RA  M + +
Sbjct: 518 TVPGTPQQNGVAERMNRTLTERARSMRMQS 547


>KRX33198.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trichinella murrelli]
          Length = 624

 Score = 73.2 bits (178), Expect(2) = 2e-16
 Identities = 36/73 (49%), Positives = 47/73 (64%)
 Frame = +1

Query: 1   GLSYIVTFIDEFSRKS*IDPIKSKDTVLETFKDFVARVETQTGLRIKRLVSDNGGEYTST 180
           G  Y ++FID+FSRKS +  +K K+  L  FKDF+A VE QT  R+K L +DNG EY + 
Sbjct: 500 GARYFLSFIDDFSRKSFVYFLKHKNEALPKFKDFIAMVERQTSKRVKCLRTDNGREYVNN 559

Query: 181 AFKEFCREKGMTH 219
            F EF   KG+ H
Sbjct: 560 MFAEFLMRKGIRH 572



 Score = 39.7 bits (91), Expect(2) = 2e-16
 Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +3

Query: 195 LQRKG-DDTLTVPGMPQQNGIAEGYNRILLDRA*CMLLSAN 314
           L RKG     T+P  PQQNG+AE  NR L+++A  ML+ AN
Sbjct: 565 LMRKGIRHERTIPETPQQNGVAERMNRTLVEKARTMLIDAN 605


>KRX30474.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trichinella murrelli] KRX33021.1
           Retrovirus-related Pol polyprotein from transposon TNT
           1-94, partial [Trichinella sp. T9]
          Length = 122

 Score = 73.2 bits (178), Expect(2) = 2e-16
 Identities = 36/73 (49%), Positives = 47/73 (64%)
 Frame = +1

Query: 1   GLSYIVTFIDEFSRKS*IDPIKSKDTVLETFKDFVARVETQTGLRIKRLVSDNGGEYTST 180
           G  Y ++FID+FSRKS +  +K K+  L  FKDF+A VE QT  R+K L +DNG EY + 
Sbjct: 8   GARYFLSFIDDFSRKSFVYFLKHKNEALPKFKDFIAMVERQTSKRVKCLRTDNGREYVNN 67

Query: 181 AFKEFCREKGMTH 219
            F EF   KG+ H
Sbjct: 68  MFAEFLMRKGIRH 80



 Score = 39.7 bits (91), Expect(2) = 2e-16
 Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +3

Query: 195 LQRKG-DDTLTVPGMPQQNGIAEGYNRILLDRA*CMLLSAN 314
           L RKG     T+P  PQQNG+AE  NR L+++A  ML+ AN
Sbjct: 73  LMRKGIRHERTIPETPQQNGVAERMNRTLVEKARTMLIDAN 113


>P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease CAA32025.1 unnamed protein product
           [Nicotiana tabacum]
          Length = 1328

 Score = 78.6 bits (192), Expect(2) = 2e-16
 Identities = 38/73 (52%), Positives = 50/73 (68%)
 Frame = +1

Query: 1   GLSYIVTFIDEFSRKS*IDPIKSKDTVLETFKDFVARVETQTGLRIKRLVSDNGGEYTST 180
           G  Y VTFID+ SRK  +  +K+KD V + F+ F A VE +TG ++KRL SDNGGEYTS 
Sbjct: 499 GNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSR 558

Query: 181 AFKEFCREKGMTH 219
            F+E+C   G+ H
Sbjct: 559 EFEEYCSSHGIRH 571



 Score = 33.9 bits (76), Expect(2) = 2e-16
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = +3

Query: 222 TVPGMPQQNGIAEGYNRILLDRA*CMLLSA 311
           TVPG PQ NG+AE  NR ++++   ML  A
Sbjct: 574 TVPGTPQHNGVAERMNRTIVEKVRSMLRMA 603


>KYP40338.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 864

 Score = 75.9 bits (185), Expect(2) = 2e-16
 Identities = 38/71 (53%), Positives = 47/71 (66%)
 Frame = +1

Query: 1   GLSYIVTFIDEFSRKS*IDPIKSKDTVLETFKDFVARVETQTGLRIKRLVSDNGGEYTST 180
           G  Y VTFID+ SRK  +  +K K  V E FK + A VE +TGL+IK+L +DNGGEY  T
Sbjct: 466 GKQYFVTFIDDHSRKVWVYFLKHKSEVFEAFKMWKAMVENETGLKIKKLRTDNGGEYEDT 525

Query: 181 AFKEFCREKGM 213
            FK FC E G+
Sbjct: 526 RFKRFCYEHGI 536



 Score = 36.6 bits (83), Expect(2) = 2e-16
 Identities = 16/23 (69%), Positives = 18/23 (78%)
 Frame = +3

Query: 222 TVPGMPQQNGIAEGYNRILLDRA 290
           TVPG PQQNG+AE  NR L +RA
Sbjct: 541 TVPGTPQQNGVAERMNRTLTERA 563


>KMQ86193.1 gag-pol polyprotein [Lasius niger]
          Length = 1343

 Score = 82.8 bits (203), Expect = 3e-16
 Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
 Frame = +1

Query: 1   GLSYIVTFIDEFSRKS*IDPIKSKDTVLETFKDFVARVETQTGLRIKRLVSDNGGEYTST 180
           G  Y VTF+D+FSR S I  I+ K  VLE FKDFVA VE   G +I +L +DNGGEYTS 
Sbjct: 516 GSRYFVTFVDDFSRASKIYCIQRKSEVLEKFKDFVAMVEALHGKKIAKLKADNGGEYTSN 575

Query: 181 AFKEFCREKG---MTHLPYLECLNKM 249
            FK+FC+ KG   M  +PY   +N +
Sbjct: 576 EFKQFCKVKGIQMMFTVPYNPEMNSV 601


>KRX55804.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trichinella sp. T9]
          Length = 842

 Score = 72.4 bits (176), Expect(2) = 3e-16
 Identities = 36/73 (49%), Positives = 47/73 (64%)
 Frame = +1

Query: 1   GLSYIVTFIDEFSRKS*IDPIKSKDTVLETFKDFVARVETQTGLRIKRLVSDNGGEYTST 180
           G  Y ++FID+FSRKS +  +K K+  L  FKDF+A VE QT  R+K L +DNG EY + 
Sbjct: 423 GARYFLSFIDDFSRKSFVYFLKHKNEALPKFKDFIAVVERQTSKRVKCLRTDNGREYVNN 482

Query: 181 AFKEFCREKGMTH 219
            F EF   KG+ H
Sbjct: 483 MFAEFLMRKGIRH 495



 Score = 39.7 bits (91), Expect(2) = 3e-16
 Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +3

Query: 195 LQRKG-DDTLTVPGMPQQNGIAEGYNRILLDRA*CMLLSAN 314
           L RKG     T+P  PQQNG+AE  NR L+++A  ML+ AN
Sbjct: 488 LMRKGIRHERTIPETPQQNGVAERMNRTLVEKARTMLIDAN 528


>KRZ33483.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trichinella pseudospiralis] KRZ41218.1
           Retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Trichinella pseudospiralis]
          Length = 1217

 Score = 72.4 bits (176), Expect(2) = 5e-16
 Identities = 36/73 (49%), Positives = 47/73 (64%)
 Frame = +1

Query: 1   GLSYIVTFIDEFSRKS*IDPIKSKDTVLETFKDFVARVETQTGLRIKRLVSDNGGEYTST 180
           G  Y ++FID+FSRKS +  +K K+ VL  FKDF+  VE QT  R+K L +DNG EY + 
Sbjct: 500 GARYFLSFIDDFSRKSFVYFLKHKNEVLPKFKDFITMVERQTSKRVKCLRTDNGREYVNN 559

Query: 181 AFKEFCREKGMTH 219
            F EF   KG+ H
Sbjct: 560 MFAEFLVRKGIRH 572



 Score = 38.9 bits (89), Expect(2) = 5e-16
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 222 TVPGMPQQNGIAEGYNRILLDRA*CMLLSAN 314
           T+P  PQQNG+AE  NR L+++A  ML+ AN
Sbjct: 575 TIPETPQQNGVAERMNRTLVEKARTMLIDAN 605