BLASTX nr result

ID: Ephedra29_contig00017283 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00017283
         (341 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJA90762.1 RNA-dependent RNA polymerase 2 [Cycas revoluta]             56   7e-07

>AJA90762.1 RNA-dependent RNA polymerase 2 [Cycas revoluta]
          Length = 1117

 Score = 56.2 bits (134), Expect = 7e-07
 Identities = 29/87 (33%), Positives = 46/87 (52%)
 Frame = -1

Query: 263 IGNLPVTVEAEQLRELAEKAVGVTGCVYACDVMRDNPIPNGAATGRVQFENADYAMELCN 84
           + N+P+T  A++L    E+ +G   CVYAC++  +         GRVQFEN D A+E C 
Sbjct: 8   VSNIPLTAVAKELVSFVERIIG-KDCVYACEIKTERMNWKSRGFGRVQFENGDAAVEACK 66

Query: 83  ICRIGNLEHEGCPLYVYLLPSDFAHKP 3
           + + G L  +   L V  + +D   +P
Sbjct: 67  LSQSGLLLFQKASLVVCSIHNDIIPRP 93


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