BLASTX nr result

ID: Ephedra29_contig00017169 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00017169
         (1172 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJA90767.1 DNA-directed RNA polymerase IV second largest subunit...   697   0.0  
AJA90782.1 DNA-directed RNA polymerase IV second largest subunit...   322   2e-96
AJP06336.1 NRPD2, partial [Pinus tabuliformis]                        315   1e-93
AJA90758.1 DNA-directed RNA polymerase IV second largest subunit...   311   3e-92
AJA90774.1 DNA-directed RNA polymerase IV second largest subunit...   306   2e-90
ADB19858.1 mutant required to maintain repression 7-1/RNA polyme...   203   2e-59
XP_012703111.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   216   8e-59
XP_002447199.1 hypothetical protein SORBIDRAFT_06g030300 [Sorghu...   215   2e-58
XP_002468227.1 hypothetical protein SORBIDRAFT_01g042100 [Sorghu...   213   1e-57
KQJ88131.1 hypothetical protein BRADI_4g15740 [Brachypodium dist...   211   3e-57
EEC78111.1 hypothetical protein OsI_17620 [Oryza sativa Indica G...   211   4e-57
EEE61785.1 hypothetical protein OsJ_16357 [Oryza sativa Japonica...   211   4e-57
XP_010237620.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   211   4e-57
XP_015636222.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   211   4e-57
XP_014758470.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   211   4e-57
BAF15955.1 Os04g0641000, partial [Oryza sativa Japonica Group]        211   4e-57
CAE05960.2 OSJNBa0063C18.1 [Oryza sativa Japonica Group]              211   4e-57
KQJ88133.1 hypothetical protein BRADI_4g15740 [Brachypodium dist...   210   9e-57
KQJ88132.1 hypothetical protein BRADI_4g15740 [Brachypodium dist...   210   1e-56
XP_010240509.1 PREDICTED: DNA-directed RNA polymerases IV and V ...   209   2e-56

>AJA90767.1 DNA-directed RNA polymerase IV second largest subunit [Ephedra
            trifurca]
          Length = 1272

 Score =  697 bits (1798), Expect = 0.0
 Identities = 342/348 (98%), Positives = 346/348 (99%)
 Frame = -2

Query: 1045 MDSIQDNAMETGNNSIIYIEDEVEQGGDQNEAMLIDGATQEIQDETMLIDDDFMEDRNVQ 866
            MDSIQDNA+ETGNNSIIYIEDEVEQGGDQNEAMLIDGATQEIQDETMLIDDDFMEDRNVQ
Sbjct: 1    MDSIQDNAVETGNNSIIYIEDEVEQGGDQNEAMLIDGATQEIQDETMLIDDDFMEDRNVQ 60

Query: 865  QGEQSGNSKTGESFVNDYDINELLQEMTVNVDEDISFEQEDGSNLTEKEMHAFSKEASKA 686
            QGEQSGNSKTGESFVNDYDINELLQEMTVNVDEDIS EQEDGS LTEKEMHAFSKEASKA
Sbjct: 61   QGEQSGNSKTGESFVNDYDINELLQEMTVNVDEDISSEQEDGSKLTEKEMHAFSKEASKA 120

Query: 685  FFDEWGLLSHQLNSFNDFISHGLQRLFDSLGDIEIEPDYNPKNKGSDGNWRRGIITLGEV 506
            FFDEWGLLSHQLNSFNDFISHGLQRLFDSLGDIEIEPDYNPKNKGSDGNWRRGIITLGEV
Sbjct: 121  FFDEWGLLSHQLNSFNDFISHGLQRLFDSLGDIEIEPDYNPKNKGSDGNWRRGIITLGEV 180

Query: 505  TVEKPSYTDKDGNRVNLKPSEARLRNMTYSSPVYVDAKIKTYLNDSPKVDSKSKASTSFL 326
            TVEKPSYTDKDGNRV+LKPSEARLRNMTYSSPVYVDAKIKTYLNDSPKVDSKSKASTSFL
Sbjct: 181  TVEKPSYTDKDGNRVDLKPSEARLRNMTYSSPVYVDAKIKTYLNDSPKVDSKSKASTSFL 240

Query: 325  SKGGKYSSNILDQSKRILIGRIPVMVKSKLCHLYGLGPEQLLKERDCYFDLGGYFIIKGH 146
            SKGGKYS+NILDQSKRILIGRIPVMVKSKLCHLYGLGPEQLLKERDCYFDLGGYFIIKGH
Sbjct: 241  SKGGKYSNNILDQSKRILIGRIPVMVKSKLCHLYGLGPEQLLKERDCYFDLGGYFIIKGH 300

Query: 145  EKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDRYLKKWDKVIVKLNED 2
            EKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDRYL+KWDKVIVKLNED
Sbjct: 301  EKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDRYLRKWDKVIVKLNED 348


>AJA90782.1 DNA-directed RNA polymerase IV second largest subunit [Pinus
            canariensis]
          Length = 1299

 Score =  322 bits (826), Expect = 2e-96
 Identities = 168/373 (45%), Positives = 240/373 (64%), Gaps = 26/373 (6%)
 Frame = -2

Query: 1045 MDSIQDNAMETGNNSIIYIEDEVEQGGDQNEAMLI------DGATQ----EIQDETMLID 896
            MD++++    T    +I I DE +    +++ + +      + ATQ    E++D      
Sbjct: 15   MDTVEEVGSSTRKIDVIDILDETDDSASEDDVVFVVEEKLEEFATQMDISEVRDSRSTEQ 74

Query: 895  D----DFMEDRNVQQGEQSGNSKTGESFVN-DYDINELLQEM-----TVNVDEDISF--- 755
            D    + M+ R       +  +KT E   N + DI + +Q +      V ++E+I     
Sbjct: 75   DVTIAEAMDGRRSNLNVANVANKTNEPASNMNMDIADEMQGLESSMNVVTIEEEIEGCTW 134

Query: 754  ---EQEDGSNLTEKEMHAFSKEASKAFFDEWGLLSHQLNSFNDFISHGLQRLFDSLGDIE 584
               E +  +  +E+E++ F  +ASKAFF+EWGL+SHQLNSFNDF+S+GLQR+FD LG+ E
Sbjct: 135  EDNEYDIQNEPSEQELNTFCIDASKAFFNEWGLISHQLNSFNDFMSNGLQRMFDDLGEFE 194

Query: 583  IEPDYNPKNKGSDGNWRRGIITLGEVTVEKPSYTDKDGNRVNLKPSEARLRNMTYSSPVY 404
            IEPDYNP+ +  DG W    I+ G+VTVE+PSY  K+G ++ LKP+EARLRNMTYSSPV+
Sbjct: 195  IEPDYNPQKRTQDGLWYHARISFGKVTVEQPSYCTKEGKKLKLKPAEARLRNMTYSSPVH 254

Query: 403  VDAKIKTYLNDSPKVDSKSKASTSFLSKGGKYSSNILDQSKRILIGRIPVMVKSKLCHLY 224
            V+ + K Y+ D  K D K K+S+S   KGG++ + I ++ K +L+GR+P+MVKS LCHLY
Sbjct: 255  VEMRTKVYIQDPVKADGKGKSSSSLNVKGGRHVTPISEEQKSVLVGRLPIMVKSHLCHLY 314

Query: 223  GLGPEQLLKERDCYFDLGGYFIIKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDRY 44
            GL P++LL E DC+FD+GGYFIIKGHEK+F+AQEERC  R+WV + P WMA YTPS    
Sbjct: 315  GLTPKELLAEGDCFFDVGGYFIIKGHEKIFVAQEERCTNRVWVSSAPSWMATYTPSRYEM 374

Query: 43   LKKWDKVIVKLNE 5
                +KV VKL +
Sbjct: 375  ATYKNKVSVKLEK 387


>AJP06336.1 NRPD2, partial [Pinus tabuliformis]
          Length = 1348

 Score =  315 bits (808), Expect = 1e-93
 Identities = 171/395 (43%), Positives = 234/395 (59%), Gaps = 47/395 (11%)
 Frame = -2

Query: 1048 GMDSIQDNAMETGNNS----IIYIEDEVEQGGDQNEAMLIDGATQEIQDETMLIDDDFME 881
            GMD + DN  E G+ +    II I +E E    +N+ +LI    +E  +E +    +  E
Sbjct: 48   GMDEV-DNVQEIGSCTRMMDIINIPEESEYPASENDVVLI---LEEKIEEIIKDISEVSE 103

Query: 880  DRNVQQGEQS-----------------GNSKTGESFVNDYDINELLQEMTVNV------- 773
                ++G  S                  N     +   D DI + ++E+  N+       
Sbjct: 104  SHETEKGMASTAEAIDGQPCKFDVAYVANKTQDCASTMDIDIADQIEELVSNLNVVTIEE 163

Query: 772  -------------------DEDISFEQEDGSNLTEKEMHAFSKEASKAFFDEWGLLSHQL 650
                               DED   ++ +   +++ E+  F K+A KAFF EWGL+SHQL
Sbjct: 164  ETKGFAVEEHEDEDEDEDKDEDEDEDEHNQDEISDNEITTFCKDACKAFFKEWGLISHQL 223

Query: 649  NSFNDFISHGLQRLFDSLGDIEIEPDYNPKNKGSDGNWRRGIITLGEVTVEKPSYTDKDG 470
            NSFNDF+S+GLQ++FD LG+ EIEPDYNP+ +  DG W    I+ G+VTVE+PSY  K+G
Sbjct: 224  NSFNDFMSNGLQKIFDDLGEFEIEPDYNPQKRTQDGLWYHARISFGKVTVEQPSYCTKEG 283

Query: 469  NRVNLKPSEARLRNMTYSSPVYVDAKIKTYLNDSPKVDSKSKASTSFLSKGGKYSSNILD 290
             ++ LKP+EARLRNMTYSSPV+V+ +IK Y+ D  K D KSK  +S  +K GK+ + I +
Sbjct: 284  KKLKLKPAEARLRNMTYSSPVHVEMEIKVYIQDPVKADGKSKCGSSLTTKSGKHVTPISE 343

Query: 289  QSKRILIGRIPVMVKSKLCHLYGLGPEQLLKERDCYFDLGGYFIIKGHEKVFIAQEERCN 110
            + K +LIGRIP+MVKS LCHLYGL P +LL + DC FD+GGYFIIKGHEK+FI QE RC 
Sbjct: 344  EHKSVLIGRIPIMVKSHLCHLYGLTPRELLTDGDCSFDVGGYFIIKGHEKIFIGQEVRCA 403

Query: 109  TRIWVQNKPVWMAVYTPSNDRYLKKWDKVIVKLNE 5
            +RIWV + P WMA YTPS  R  +   K+ VKL +
Sbjct: 404  SRIWVCSAPCWMATYTPSRCRLGRNKSKITVKLEK 438


>AJA90758.1 DNA-directed RNA polymerase IV second largest subunit [Cycas
            revoluta]
          Length = 1348

 Score =  311 bits (797), Expect = 3e-92
 Identities = 162/389 (41%), Positives = 244/389 (62%), Gaps = 26/389 (6%)
 Frame = -2

Query: 1093 LQDSHQVQKL*DTSNGMDSIQDNAMETGNNSIIYIEDEVEQGGDQNEAMLIDGATQE--- 923
            + ++ +++    +  G D+ +   + T    ++ I DE+E  G +++ + I   T++   
Sbjct: 48   INNAEEIENCKKSWEGRDNTEGIEVCTKEMDLMDIADEIEDSGSKDDVVFIVEETEDSGT 107

Query: 922  ----------------IQDETMLIDDDFMEDRNVQQGEQS-------GNSKTGESFVNDY 812
                            ++D+T    +D   D + ++ EQ         +++  E  V+  
Sbjct: 108  NRDVEEIAEGRCNVVAVRDDT----EDNASDMDAERTEQHLRSMAVIDSAEKTEKHVSSV 163

Query: 811  DINELLQEMTVNVDEDISFEQEDGSNLTEKEMHAFSKEASKAFFDEWGLLSHQLNSFNDF 632
            D+ ++ +    +  E    E+ +G   +EKE+H F ++ SKAFF +WGL+SHQLNSFNDF
Sbjct: 164  DMVDIQEGTEDSAREQDIMEKIEGE-FSEKELHNFCRDTSKAFFIQWGLISHQLNSFNDF 222

Query: 631  ISHGLQRLFDSLGDIEIEPDYNPKNKGSDGNWRRGIITLGEVTVEKPSYTDKDGNRVNLK 452
            +S+GLQ++ D +G   +EPDYNP+ + +DG WR   I+ G+VTVEKPSY    G ++ LK
Sbjct: 223  MSNGLQQVVDDIGGFVVEPDYNPQKQKADGLWRHASISFGKVTVEKPSYCTVKGKKLQLK 282

Query: 451  PSEARLRNMTYSSPVYVDAKIKTYLNDSPKVDSKSKASTSFLSKGGKYSSNILDQSKRIL 272
            P+EARLRNMTYS+PVYV+ K+K Y  D+ K + K K ++S   KGG+    + +++  +L
Sbjct: 283  PTEARLRNMTYSAPVYVEMKMKIYTRDNGKTNGKCKNNSSLPVKGGENVMVLHEENNNVL 342

Query: 271  IGRIPVMVKSKLCHLYGLGPEQLLKERDCYFDLGGYFIIKGHEKVFIAQEERCNTRIWVQ 92
            IGRIPVMVKS+LCH++GL P+ LLK+ DCYFD+GGYFIIKGHEK+FIAQEERC +RIWV 
Sbjct: 343  IGRIPVMVKSELCHMHGLAPKDLLKKGDCYFDVGGYFIIKGHEKIFIAQEERCTSRIWVS 402

Query: 91   NKPVWMAVYTPSNDRYLKKWDKVIVKLNE 5
            +KP WM  YTP   R  +   KV+VKL+E
Sbjct: 403  SKPSWMVTYTP-KCRISQYKHKVVVKLSE 430


>AJA90774.1 DNA-directed RNA polymerase IV second largest subunit [Ginkgo biloba]
          Length = 1328

 Score =  306 bits (784), Expect = 2e-90
 Identities = 158/376 (42%), Positives = 228/376 (60%), Gaps = 15/376 (3%)
 Frame = -2

Query: 1087 DSHQVQKL*DTSNGMDSIQDNAMETGNNSIIYIEDEVEQGGDQNEAMLIDGATQEIQDET 908
            ++ +++   +  + +D  ++       + +++I +E +    + +       T++     
Sbjct: 43   NAEEIEVFTEKIDAIDISEETESSASKDDVVFIVEETDNSATKRDVADFAEETEDSMANW 102

Query: 907  MLIDDDFMEDRNVQQGEQSGNSKTGESFVNDYDINEL---------------LQEMTVNV 773
              +D     D +  + +    ++  E   ++ DI  +               + E T + 
Sbjct: 103  SAVDILEETDNHPMKWDAVEVAEETEDHASNMDIGGIAMETEECPSKMDVVGIAEETEDC 162

Query: 772  DEDISFEQEDGSNLTEKEMHAFSKEASKAFFDEWGLLSHQLNSFNDFISHGLQRLFDSLG 593
              D    +E    L+EKE+H F ++ASKAFF EWGL+SHQLNSF+DF+S+GLQ++ D +G
Sbjct: 163  ATDEDLMEEIEGKLSEKELHNFCRDASKAFFSEWGLISHQLNSFDDFMSNGLQKVVDDIG 222

Query: 592  DIEIEPDYNPKNKGSDGNWRRGIITLGEVTVEKPSYTDKDGNRVNLKPSEARLRNMTYSS 413
               +EPDYNP+ +  DG W R  I+LG+VTVEKPSY  K+G ++ LKP+EARLRNMTYS+
Sbjct: 223  KFVVEPDYNPQKRKPDGLWNRASISLGKVTVEKPSYCTKEGKKLQLKPTEARLRNMTYSA 282

Query: 412  PVYVDAKIKTYLNDSPKVDSKSKASTSFLSKGGKYSSNILDQSKRILIGRIPVMVKSKLC 233
            PVYV+  +K Y   + K D KSK+S     KGG     + ++S  +LIGRIPVMVKS+LC
Sbjct: 283  PVYVEMTMKVYTQQNTKDDGKSKSSVPM--KGGVNLKVLHEESSNVLIGRIPVMVKSRLC 340

Query: 232  HLYGLGPEQLLKERDCYFDLGGYFIIKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSN 53
            HLYGL  + LLKE DCYFD+GGYFIIKGHEK+FIAQEERC  RIWV + P W+A YT S 
Sbjct: 341  HLYGLTRKDLLKEGDCYFDVGGYFIIKGHEKIFIAQEERCPKRIWVSSTPNWIATYTSSK 400

Query: 52   DRYLKKWDKVIVKLNE 5
                +  +KV VKL+E
Sbjct: 401  SGVSRFKNKVTVKLSE 416


>ADB19858.1 mutant required to maintain repression 7-1/RNA polymerase D second
           largest subunit 2-1 [Zea mays]
          Length = 286

 Score =  203 bits (517), Expect = 2e-59
 Identities = 116/283 (40%), Positives = 169/283 (59%), Gaps = 6/283 (2%)
 Frame = -2

Query: 913 ETMLIDDDFM-EDRNVQQGEQSGNSKTGESFVNDYDINELLQEMTVNVDEDISFEQEDGS 737
           E M++DD+   +  ++++   S     G     D DI     + +++ D +     E  S
Sbjct: 20  EAMVLDDNGAGKSHSMEENRDSPIDVDGGQSSMDVDIKG---KSSLSDDVNGKSSSEPYS 76

Query: 736 N----LTEKEMHAFSKEASKAFFDEWGLLSHQLNSFNDFISHGLQRLFDSLGDIEIEPDY 569
           N    ++ + +  F KEAS++FFDE GL+SHQ+NS+N+F+SHGLQ LFDSLG++ +EP Y
Sbjct: 77  NAPIDMSVESLEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSLGEVIVEPGY 136

Query: 568 NPKNKGSDGNWRRGIITLGEVTVEKPSY-TDKDGNRVNLKPSEARLRNMTYSSPVYVDAK 392
           +P  KGS G W+  II  G V +EKP + T KD   V+ KP  ARL+NMTY+S + V+  
Sbjct: 137 DPSKKGS-GGWKHAIIKFGRVKLEKPVFWTGKDEGSVDFKPWHARLQNMTYASRLIVEVT 195

Query: 391 IKTYLNDSPKVDSKSKASTSFLSKGGKYSSNILDQSKRILIGRIPVMVKSKLCHLYGLGP 212
           I+ Y     K D     +  F+ K      N ++++  I IG +PVMVKS LC L+    
Sbjct: 196 IQVY--SLEKSDKSKTGNDGFVQK-----RNFMNETHWIFIGLLPVMVKSNLCLLHS--- 245

Query: 211 EQLLKERDCYFDLGGYFIIKGHEKVFIAQEERCNTRIWVQNKP 83
              L E +C FD GGYF++KG EKVFIAQE+RC  R+W+ ++P
Sbjct: 246 ---LNESECLFDAGGYFLVKGMEKVFIAQEQRCLRRLWISDRP 285


>XP_012703111.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
           [Setaria italica] KQK99160.1 hypothetical protein
           SETIT_009201mg [Setaria italica]
          Length = 1234

 Score =  216 bits (551), Expect = 8e-59
 Identities = 123/299 (41%), Positives = 178/299 (59%), Gaps = 18/299 (6%)
 Frame = -2

Query: 919 QDETMLIDDDFMEDRNVQQGEQSGNSKTGESFVNDYDINELLQEMTVNVDEDISFEQE-- 746
           + E M++DD+        + E S N   G ++ +  D++E    M V+V    S + E  
Sbjct: 18  EPELMVLDDN--------RAEISHNMDEGNNY-SPIDVDEGQSSMDVDVKGKSSLDDESL 68

Query: 745 DGS---------------NLTEKEMHAFSKEASKAFFDEWGLLSHQLNSFNDFISHGLQR 611
           DG                +++ + +  F KEAS++FFDE GL+SHQ+NS+N+F+SHGLQ+
Sbjct: 69  DGDANGKSSSEPYSNVPIDMSVESLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQK 128

Query: 610 LFDSLGDIEIEPDYNPKNKGSDGNWRRGIITLGEVTVEKPSY-TDKDGNRVNLKPSEARL 434
           LFDSLGD+ +EP Y+P  KGS G W+  II  G V +EKP + + KD   ++ KP  ARL
Sbjct: 129 LFDSLGDVIVEPGYDPSKKGS-GGWKHAIIKFGRVKLEKPVFWSGKDEVDIDFKPRHARL 187

Query: 433 RNMTYSSPVYVDAKIKTYLNDSPKVDSKSKASTSFLSKGGKYSSNILDQSKRILIGRIPV 254
           +NMTY+S + V+  IK Y     K D     +  F+ K      + ++++  I IGR+PV
Sbjct: 188 QNMTYASRIKVEVTIKVY--SLEKSDKSKTGNDDFVQK-----RDFMNETHWIYIGRLPV 240

Query: 253 MVKSKLCHLYGLGPEQLLKERDCYFDLGGYFIIKGHEKVFIAQEERCNTRIWVQNKPVW 77
           MVKS LC L+       LKE DC FD GGYF++KG EKVFIAQE+RC +R+W+ ++P W
Sbjct: 241 MVKSNLCLLHN------LKESDCLFDAGGYFLVKGMEKVFIAQEQRCLSRLWISDRPCW 293


>XP_002447199.1 hypothetical protein SORBIDRAFT_06g030300 [Sorghum bicolor]
           EES11527.1 hypothetical protein SORBI_006G236000
           [Sorghum bicolor]
          Length = 1239

 Score =  215 bits (548), Expect = 2e-58
 Identities = 120/295 (40%), Positives = 171/295 (57%), Gaps = 13/295 (4%)
 Frame = -2

Query: 919 QDETMLIDDDFMEDRNVQQGEQSGNSKTGESFVNDYDINELLQEMTVNVDEDISFEQE-D 743
           + E M++DD+        +G +           +  D+NE    M V++    S   + +
Sbjct: 18  EPEAMVLDDNGAGKSRSMEGNEDSPIDADVGKDSPIDVNEGQSSMDVDIKAKSSLNDDVN 77

Query: 742 GSNLTE-----------KEMHAFSKEASKAFFDEWGLLSHQLNSFNDFISHGLQRLFDSL 596
           G + +E           + +  F KEAS++FFDE GL+SHQ+NS+N+F+SHGLQ LFDSL
Sbjct: 78  GKSSSEPYSNAPIDMSVESLEKFCKEASRSFFDEVGLISHQINSYNEFVSHGLQELFDSL 137

Query: 595 GDIEIEPDYNPKNKGSDGNWRRGIITLGEVTVEKPSY-TDKDGNRVNLKPSEARLRNMTY 419
           G++ +EP Y+P  KGS G W+  II  G V +EKP + T KD   V+ KP  ARL+NMTY
Sbjct: 138 GEVIVEPGYDPSKKGS-GGWKHAIIKFGRVKLEKPVFWTGKDEGSVDFKPWHARLQNMTY 196

Query: 418 SSPVYVDAKIKTYLNDSPKVDSKSKASTSFLSKGGKYSSNILDQSKRILIGRIPVMVKSK 239
           +S + V+  I+ Y     K D     +  F+ K      N ++++  I IG +PVMVKS 
Sbjct: 197 ASRLKVEVTIQVY--SLEKSDKSKTGNEGFVQK-----RNFMNETHWIFIGLLPVMVKSN 249

Query: 238 LCHLYGLGPEQLLKERDCYFDLGGYFIIKGHEKVFIAQEERCNTRIWVQNKPVWM 74
           LC L+       LKE +C FD GGYF++KG EKVFIAQE+RC  R+WV ++P WM
Sbjct: 250 LCLLHS------LKESECLFDAGGYFLVKGMEKVFIAQEQRCLKRLWVSDRPFWM 298


>XP_002468227.1 hypothetical protein SORBIDRAFT_01g042100 [Sorghum bicolor]
           EER95225.1 hypothetical protein SORBI_001G448100
           [Sorghum bicolor]
          Length = 1228

 Score =  213 bits (542), Expect = 1e-57
 Identities = 130/319 (40%), Positives = 182/319 (57%), Gaps = 13/319 (4%)
 Frame = -2

Query: 991 IEDEVEQGGDQNEAMLIDGATQEIQDETMLIDDD-----FMEDRN------VQQGEQSGN 845
           +E+  + GG Q+          + + E M++DD+        D N      V +G+ S +
Sbjct: 1   MEELQKDGGQQSNG-------SDSEPEAMVLDDNGAGKSHSMDGNRDSPVDVDEGQSSMD 53

Query: 844 SKT-GESFVNDYDINELLQEMTVNVDEDISFEQEDGSNLTEKEMHAFSKEASKAFFDEWG 668
             T G+  +ND D+N    E   N   D+S E           +  F KEAS++FFDE G
Sbjct: 54  VDTKGKPSLND-DVNGKSSEPYSNAPIDLSVES----------LEKFCKEASRSFFDEVG 102

Query: 667 LLSHQLNSFNDFISHGLQRLFDSLGDIEIEPDYNPKNKGSDGNWRRGIITLGEVTVEKPS 488
           L+SHQ+NS+NDF+SHGLQ LFDSLG++ +EP Y+P  KGS G W+  II  G V +EKP 
Sbjct: 103 LISHQINSYNDFVSHGLQELFDSLGEVIVEPGYDPSKKGS-GGWKHAIIKFGRVKLEKPV 161

Query: 487 Y-TDKDGNRVNLKPSEARLRNMTYSSPVYVDAKIKTYLNDSPKVDSKSKASTSFLSKGGK 311
           + T KD   V+ KP  ARL+NMTY+S + V+  I+ Y     K D     +  F+ K   
Sbjct: 162 FWTGKDEGSVDFKPWHARLQNMTYASRLIVEVNIQVY--SLEKSDKSKTGNDGFVQK--- 216

Query: 310 YSSNILDQSKRILIGRIPVMVKSKLCHLYGLGPEQLLKERDCYFDLGGYFIIKGHEKVFI 131
              + ++++  I IG +PVMVKS LC L+       LKE +C FD GGYF++KG EKVFI
Sbjct: 217 --RDFMNETHWIFIGLLPVMVKSNLCLLHS------LKESECLFDAGGYFLVKGMEKVFI 268

Query: 130 AQEERCNTRIWVQNKPVWM 74
           AQE RC  R+W+ ++P WM
Sbjct: 269 AQELRCLKRLWIIDRPCWM 287


>KQJ88131.1 hypothetical protein BRADI_4g15740 [Brachypodium distachyon]
           KQJ88135.1 hypothetical protein BRADI_4g15740
           [Brachypodium distachyon]
          Length = 1047

 Score =  211 bits (538), Expect = 3e-57
 Identities = 126/302 (41%), Positives = 175/302 (57%), Gaps = 7/302 (2%)
 Frame = -2

Query: 913 ETMLIDDDFMEDRNVQQGEQSGNSKTGESFVNDYDINELLQEMTVNVDEDISFEQEDGSN 734
           E M++DD      N + G  + +   G+S + D DI            E  S  ++  ++
Sbjct: 20  EPMILDD------NEESGSHTMDDSNGQSSM-DIDI------------EGSSMGEQIPAD 60

Query: 733 LTEKEMHAFSKEASKAFFDEWGLLSHQLNSFNDFISHGLQRLFDSLGDIEIEPDYNPKNK 554
           +    +  F KEAS++FF+E GL+SHQ+NS+N+FISHGLQ LFDSLG++ +EP Y+P  K
Sbjct: 61  MNLTSLEKFCKEASRSFFEEIGLISHQINSYNEFISHGLQELFDSLGEVTVEPGYDPSKK 120

Query: 553 GSDGNWRRGIITLGEVTVEKPSY----TDKDGNRVNLKPSEARLRNMTYSSPVYVDAKIK 386
           G  G WR  II  G+V +E+P +     D D   + LKP  ARL+NMTYSS + V+  I+
Sbjct: 121 G-PGGWRHAIIKFGKVKLEEPVFWSGKIDIDEESLKLKPRHARLQNMTYSSKMEVEVNIQ 179

Query: 385 TYLNDSPKVDSKSKASTSFLSKGGKYSSNILDQSKRILIGRIPVMVKSKLCHLYGLGPEQ 206
            Y      ++   KA T     G K   +I++++  + IGR+PVMV S LC L+ LG   
Sbjct: 180 VY-----SMEKSDKAKTGNDHFGHK--RDIINETHWVTIGRLPVMVNSDLCWLHKLG--- 229

Query: 205 LLKERDCYFDLGGYFIIKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDR---YLKK 35
              E DC FD GGYF+IKG EK+FIAQE+RC TRIWV ++P W   Y     R   Y+K 
Sbjct: 230 ---ESDCLFDSGGYFLIKGMEKIFIAQEQRCLTRIWVADQPCWNVSYLSEMKRRRVYIKL 286

Query: 34  WD 29
            D
Sbjct: 287 ID 288


>EEC78111.1 hypothetical protein OsI_17620 [Oryza sativa Indica Group]
          Length = 1177

 Score =  211 bits (538), Expect = 4e-57
 Identities = 110/222 (49%), Positives = 146/222 (65%), Gaps = 4/222 (1%)
 Frame = -2

Query: 718 MHAFSKEASKAFFDEWGLLSHQLNSFNDFISHGLQRLFDSLGDIEIEPDYNPKNKGSDGN 539
           +  F KEAS++FFDE GL+SHQ+NS+N+F+SHGLQ LFDSLG++ +EP Y+P N+G  G 
Sbjct: 83  LEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSNRG-PGG 141

Query: 538 WRRGIITLGEVTVEKPSY----TDKDGNRVNLKPSEARLRNMTYSSPVYVDAKIKTYLND 371
           WR  II  G V +E+P +     D D   + LKP  ARL+NMTYSS + V+   + Y   
Sbjct: 142 WRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQVY--- 198

Query: 370 SPKVDSKSKASTSFLSKGGKYSSNILDQSKRILIGRIPVMVKSKLCHLYGLGPEQLLKER 191
              ++   KA T     G  Y  NI++++  I IGR+PVMV S LC L+       LKE 
Sbjct: 199 --SMEKSDKAKTGNDKFG--YKRNIINETYYINIGRLPVMVMSNLCWLH------KLKES 248

Query: 190 DCYFDLGGYFIIKGHEKVFIAQEERCNTRIWVQNKPVWMAVY 65
           DC FD GGYF+IKG EKVFIAQE++C TRIWV+++P WM  +
Sbjct: 249 DCQFDSGGYFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSF 290


>EEE61785.1 hypothetical protein OsJ_16357 [Oryza sativa Japonica Group]
          Length = 1185

 Score =  211 bits (538), Expect = 4e-57
 Identities = 110/222 (49%), Positives = 146/222 (65%), Gaps = 4/222 (1%)
 Frame = -2

Query: 718 MHAFSKEASKAFFDEWGLLSHQLNSFNDFISHGLQRLFDSLGDIEIEPDYNPKNKGSDGN 539
           +  F KEAS++FFDE GL+SHQ+NS+N+F+SHGLQ LFDSLG++ +EP Y+P N+G  G 
Sbjct: 83  LEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSNRG-PGG 141

Query: 538 WRRGIITLGEVTVEKPSY----TDKDGNRVNLKPSEARLRNMTYSSPVYVDAKIKTYLND 371
           WR  II  G V +E+P +     D D   + LKP  ARL+NMTYSS + V+   + Y   
Sbjct: 142 WRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQVY--- 198

Query: 370 SPKVDSKSKASTSFLSKGGKYSSNILDQSKRILIGRIPVMVKSKLCHLYGLGPEQLLKER 191
              ++   KA T     G  Y  NI++++  I IGR+PVMV S LC L+       LKE 
Sbjct: 199 --SMEKSDKAKTGNDKFG--YKRNIINETYYINIGRLPVMVMSNLCWLH------KLKES 248

Query: 190 DCYFDLGGYFIIKGHEKVFIAQEERCNTRIWVQNKPVWMAVY 65
           DC FD GGYF+IKG EKVFIAQE++C TRIWV+++P WM  +
Sbjct: 249 DCQFDSGGYFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSF 290


>XP_010237620.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
           isoform X2 [Brachypodium distachyon] KQJ88134.1
           hypothetical protein BRADI_4g15740 [Brachypodium
           distachyon]
          Length = 1213

 Score =  211 bits (538), Expect = 4e-57
 Identities = 126/302 (41%), Positives = 175/302 (57%), Gaps = 7/302 (2%)
 Frame = -2

Query: 913 ETMLIDDDFMEDRNVQQGEQSGNSKTGESFVNDYDINELLQEMTVNVDEDISFEQEDGSN 734
           E M++DD      N + G  + +   G+S + D DI            E  S  ++  ++
Sbjct: 20  EPMILDD------NEESGSHTMDDSNGQSSM-DIDI------------EGSSMGEQIPAD 60

Query: 733 LTEKEMHAFSKEASKAFFDEWGLLSHQLNSFNDFISHGLQRLFDSLGDIEIEPDYNPKNK 554
           +    +  F KEAS++FF+E GL+SHQ+NS+N+FISHGLQ LFDSLG++ +EP Y+P  K
Sbjct: 61  MNLTSLEKFCKEASRSFFEEIGLISHQINSYNEFISHGLQELFDSLGEVTVEPGYDPSKK 120

Query: 553 GSDGNWRRGIITLGEVTVEKPSY----TDKDGNRVNLKPSEARLRNMTYSSPVYVDAKIK 386
           G  G WR  II  G+V +E+P +     D D   + LKP  ARL+NMTYSS + V+  I+
Sbjct: 121 G-PGGWRHAIIKFGKVKLEEPVFWSGKIDIDEESLKLKPRHARLQNMTYSSKMEVEVNIQ 179

Query: 385 TYLNDSPKVDSKSKASTSFLSKGGKYSSNILDQSKRILIGRIPVMVKSKLCHLYGLGPEQ 206
            Y      ++   KA T     G K   +I++++  + IGR+PVMV S LC L+ LG   
Sbjct: 180 VY-----SMEKSDKAKTGNDHFGHK--RDIINETHWVTIGRLPVMVNSDLCWLHKLG--- 229

Query: 205 LLKERDCYFDLGGYFIIKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDR---YLKK 35
              E DC FD GGYF+IKG EK+FIAQE+RC TRIWV ++P W   Y     R   Y+K 
Sbjct: 230 ---ESDCLFDSGGYFLIKGMEKIFIAQEQRCLTRIWVADQPCWNVSYLSEMKRRRVYIKL 286

Query: 34  WD 29
            D
Sbjct: 287 ID 288


>XP_015636222.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Oryza
           sativa Japonica Group] BAS91258.1 Os04g0641000 [Oryza
           sativa Japonica Group]
          Length = 1252

 Score =  211 bits (538), Expect = 4e-57
 Identities = 110/222 (49%), Positives = 146/222 (65%), Gaps = 4/222 (1%)
 Frame = -2

Query: 718 MHAFSKEASKAFFDEWGLLSHQLNSFNDFISHGLQRLFDSLGDIEIEPDYNPKNKGSDGN 539
           +  F KEAS++FFDE GL+SHQ+NS+N+F+SHGLQ LFDSLG++ +EP Y+P N+G  G 
Sbjct: 83  LEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSNRG-PGG 141

Query: 538 WRRGIITLGEVTVEKPSY----TDKDGNRVNLKPSEARLRNMTYSSPVYVDAKIKTYLND 371
           WR  II  G V +E+P +     D D   + LKP  ARL+NMTYSS + V+   + Y   
Sbjct: 142 WRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQVY--- 198

Query: 370 SPKVDSKSKASTSFLSKGGKYSSNILDQSKRILIGRIPVMVKSKLCHLYGLGPEQLLKER 191
              ++   KA T     G  Y  NI++++  I IGR+PVMV S LC L+       LKE 
Sbjct: 199 --SMEKSDKAKTGNDKFG--YKRNIINETYYINIGRLPVMVMSNLCWLH------KLKES 248

Query: 190 DCYFDLGGYFIIKGHEKVFIAQEERCNTRIWVQNKPVWMAVY 65
           DC FD GGYF+IKG EKVFIAQE++C TRIWV+++P WM  +
Sbjct: 249 DCQFDSGGYFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSF 290


>XP_014758470.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
           isoform X1 [Brachypodium distachyon]
          Length = 1263

 Score =  211 bits (538), Expect = 4e-57
 Identities = 126/302 (41%), Positives = 175/302 (57%), Gaps = 7/302 (2%)
 Frame = -2

Query: 913 ETMLIDDDFMEDRNVQQGEQSGNSKTGESFVNDYDINELLQEMTVNVDEDISFEQEDGSN 734
           E M++DD      N + G  + +   G+S + D DI            E  S  ++  ++
Sbjct: 70  EPMILDD------NEESGSHTMDDSNGQSSM-DIDI------------EGSSMGEQIPAD 110

Query: 733 LTEKEMHAFSKEASKAFFDEWGLLSHQLNSFNDFISHGLQRLFDSLGDIEIEPDYNPKNK 554
           +    +  F KEAS++FF+E GL+SHQ+NS+N+FISHGLQ LFDSLG++ +EP Y+P  K
Sbjct: 111 MNLTSLEKFCKEASRSFFEEIGLISHQINSYNEFISHGLQELFDSLGEVTVEPGYDPSKK 170

Query: 553 GSDGNWRRGIITLGEVTVEKPSY----TDKDGNRVNLKPSEARLRNMTYSSPVYVDAKIK 386
           G  G WR  II  G+V +E+P +     D D   + LKP  ARL+NMTYSS + V+  I+
Sbjct: 171 G-PGGWRHAIIKFGKVKLEEPVFWSGKIDIDEESLKLKPRHARLQNMTYSSKMEVEVNIQ 229

Query: 385 TYLNDSPKVDSKSKASTSFLSKGGKYSSNILDQSKRILIGRIPVMVKSKLCHLYGLGPEQ 206
            Y      ++   KA T     G K   +I++++  + IGR+PVMV S LC L+ LG   
Sbjct: 230 VY-----SMEKSDKAKTGNDHFGHK--RDIINETHWVTIGRLPVMVNSDLCWLHKLG--- 279

Query: 205 LLKERDCYFDLGGYFIIKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDR---YLKK 35
              E DC FD GGYF+IKG EK+FIAQE+RC TRIWV ++P W   Y     R   Y+K 
Sbjct: 280 ---ESDCLFDSGGYFLIKGMEKIFIAQEQRCLTRIWVADQPCWNVSYLSEMKRRRVYIKL 336

Query: 34  WD 29
            D
Sbjct: 337 ID 338


>BAF15955.1 Os04g0641000, partial [Oryza sativa Japonica Group]
          Length = 1270

 Score =  211 bits (538), Expect = 4e-57
 Identities = 110/222 (49%), Positives = 146/222 (65%), Gaps = 4/222 (1%)
 Frame = -2

Query: 718 MHAFSKEASKAFFDEWGLLSHQLNSFNDFISHGLQRLFDSLGDIEIEPDYNPKNKGSDGN 539
           +  F KEAS++FFDE GL+SHQ+NS+N+F+SHGLQ LFDSLG++ +EP Y+P N+G  G 
Sbjct: 101 LEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSNRG-PGG 159

Query: 538 WRRGIITLGEVTVEKPSY----TDKDGNRVNLKPSEARLRNMTYSSPVYVDAKIKTYLND 371
           WR  II  G V +E+P +     D D   + LKP  ARL+NMTYSS + V+   + Y   
Sbjct: 160 WRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQVY--- 216

Query: 370 SPKVDSKSKASTSFLSKGGKYSSNILDQSKRILIGRIPVMVKSKLCHLYGLGPEQLLKER 191
              ++   KA T     G  Y  NI++++  I IGR+PVMV S LC L+       LKE 
Sbjct: 217 --SMEKSDKAKTGNDKFG--YKRNIINETYYINIGRLPVMVMSNLCWLH------KLKES 266

Query: 190 DCYFDLGGYFIIKGHEKVFIAQEERCNTRIWVQNKPVWMAVY 65
           DC FD GGYF+IKG EKVFIAQE++C TRIWV+++P WM  +
Sbjct: 267 DCQFDSGGYFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSF 308


>CAE05960.2 OSJNBa0063C18.1 [Oryza sativa Japonica Group]
          Length = 1316

 Score =  211 bits (538), Expect = 4e-57
 Identities = 110/222 (49%), Positives = 146/222 (65%), Gaps = 4/222 (1%)
 Frame = -2

Query: 718 MHAFSKEASKAFFDEWGLLSHQLNSFNDFISHGLQRLFDSLGDIEIEPDYNPKNKGSDGN 539
           +  F KEAS++FFDE GL+SHQ+NS+N+F+SHGLQ LFDSLG++ +EP Y+P N+G  G 
Sbjct: 147 LEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSNRG-PGG 205

Query: 538 WRRGIITLGEVTVEKPSY----TDKDGNRVNLKPSEARLRNMTYSSPVYVDAKIKTYLND 371
           WR  II  G V +E+P +     D D   + LKP  ARL+NMTYSS + V+   + Y   
Sbjct: 206 WRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQVY--- 262

Query: 370 SPKVDSKSKASTSFLSKGGKYSSNILDQSKRILIGRIPVMVKSKLCHLYGLGPEQLLKER 191
              ++   KA T     G  Y  NI++++  I IGR+PVMV S LC L+       LKE 
Sbjct: 263 --SMEKSDKAKTGNDKFG--YKRNIINETYYINIGRLPVMVMSNLCWLH------KLKES 312

Query: 190 DCYFDLGGYFIIKGHEKVFIAQEERCNTRIWVQNKPVWMAVY 65
           DC FD GGYF+IKG EKVFIAQE++C TRIWV+++P WM  +
Sbjct: 313 DCQFDSGGYFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSF 354


>KQJ88133.1 hypothetical protein BRADI_4g15740 [Brachypodium distachyon]
          Length = 1026

 Score =  210 bits (534), Expect = 9e-57
 Identities = 123/291 (42%), Positives = 170/291 (58%), Gaps = 7/291 (2%)
 Frame = -2

Query: 880 DRNVQQGEQSGNSKTGESFVNDYDINELLQEMTVNVDEDISFEQEDGSNLTEKEMHAFSK 701
           D N + G  + +   G+S + D DI            E  S  ++  +++    +  F K
Sbjct: 4   DDNEESGSHTMDDSNGQSSM-DIDI------------EGSSMGEQIPADMNLTSLEKFCK 50

Query: 700 EASKAFFDEWGLLSHQLNSFNDFISHGLQRLFDSLGDIEIEPDYNPKNKGSDGNWRRGII 521
           EAS++FF+E GL+SHQ+NS+N+FISHGLQ LFDSLG++ +EP Y+P  KG  G WR  II
Sbjct: 51  EASRSFFEEIGLISHQINSYNEFISHGLQELFDSLGEVTVEPGYDPSKKG-PGGWRHAII 109

Query: 520 TLGEVTVEKPSY----TDKDGNRVNLKPSEARLRNMTYSSPVYVDAKIKTYLNDSPKVDS 353
             G+V +E+P +     D D   + LKP  ARL+NMTYSS + V+  I+ Y      ++ 
Sbjct: 110 KFGKVKLEEPVFWSGKIDIDEESLKLKPRHARLQNMTYSSKMEVEVNIQVY-----SMEK 164

Query: 352 KSKASTSFLSKGGKYSSNILDQSKRILIGRIPVMVKSKLCHLYGLGPEQLLKERDCYFDL 173
             KA T     G K   +I++++  + IGR+PVMV S LC L+ LG      E DC FD 
Sbjct: 165 SDKAKTGNDHFGHK--RDIINETHWVTIGRLPVMVNSDLCWLHKLG------ESDCLFDS 216

Query: 172 GGYFIIKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDR---YLKKWD 29
           GGYF+IKG EK+FIAQE+RC TRIWV ++P W   Y     R   Y+K  D
Sbjct: 217 GGYFLIKGMEKIFIAQEQRCLTRIWVADQPCWNVSYLSEMKRRRVYIKLID 267


>KQJ88132.1 hypothetical protein BRADI_4g15740 [Brachypodium distachyon]
          Length = 1192

 Score =  210 bits (534), Expect = 1e-56
 Identities = 123/291 (42%), Positives = 170/291 (58%), Gaps = 7/291 (2%)
 Frame = -2

Query: 880 DRNVQQGEQSGNSKTGESFVNDYDINELLQEMTVNVDEDISFEQEDGSNLTEKEMHAFSK 701
           D N + G  + +   G+S + D DI            E  S  ++  +++    +  F K
Sbjct: 4   DDNEESGSHTMDDSNGQSSM-DIDI------------EGSSMGEQIPADMNLTSLEKFCK 50

Query: 700 EASKAFFDEWGLLSHQLNSFNDFISHGLQRLFDSLGDIEIEPDYNPKNKGSDGNWRRGII 521
           EAS++FF+E GL+SHQ+NS+N+FISHGLQ LFDSLG++ +EP Y+P  KG  G WR  II
Sbjct: 51  EASRSFFEEIGLISHQINSYNEFISHGLQELFDSLGEVTVEPGYDPSKKG-PGGWRHAII 109

Query: 520 TLGEVTVEKPSY----TDKDGNRVNLKPSEARLRNMTYSSPVYVDAKIKTYLNDSPKVDS 353
             G+V +E+P +     D D   + LKP  ARL+NMTYSS + V+  I+ Y      ++ 
Sbjct: 110 KFGKVKLEEPVFWSGKIDIDEESLKLKPRHARLQNMTYSSKMEVEVNIQVY-----SMEK 164

Query: 352 KSKASTSFLSKGGKYSSNILDQSKRILIGRIPVMVKSKLCHLYGLGPEQLLKERDCYFDL 173
             KA T     G K   +I++++  + IGR+PVMV S LC L+ LG      E DC FD 
Sbjct: 165 SDKAKTGNDHFGHK--RDIINETHWVTIGRLPVMVNSDLCWLHKLG------ESDCLFDS 216

Query: 172 GGYFIIKGHEKVFIAQEERCNTRIWVQNKPVWMAVYTPSNDR---YLKKWD 29
           GGYF+IKG EK+FIAQE+RC TRIWV ++P W   Y     R   Y+K  D
Sbjct: 217 GGYFLIKGMEKIFIAQEQRCLTRIWVADQPCWNVSYLSEMKRRRVYIKLID 267


>XP_010240509.1 PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
           [Brachypodium distachyon] XP_014751538.1 PREDICTED:
           DNA-directed RNA polymerases IV and V subunit 2-like
           [Brachypodium distachyon] KQJ84889.1 hypothetical
           protein BRADI_5g23540 [Brachypodium distachyon]
           KQJ84890.1 hypothetical protein BRADI_5g23540
           [Brachypodium distachyon] KQJ84891.1 hypothetical
           protein BRADI_5g23540 [Brachypodium distachyon]
           KQJ84892.1 hypothetical protein BRADI_5g23540
           [Brachypodium distachyon]
          Length = 1236

 Score =  209 bits (533), Expect = 2e-56
 Identities = 122/293 (41%), Positives = 176/293 (60%), Gaps = 10/293 (3%)
 Frame = -2

Query: 913 ETMLIDDDFMEDRNVQQGEQSGNSKTG-ESFVNDYDINELLQEMTVNVDEDISFEQEDGS 737
           E M++DDD  E R+    + +  S  G +S  +  D+ ++  + +++ D    +  E   
Sbjct: 20  EPMILDDDG-ESRSRTIDDSNEQSSMGIDSDRSSMDV-DMKGKSSLDGDGKGKYSSESHE 77

Query: 736 ----NLTEKEMHAFSKEASKAFFDEWGLLSHQLNSFNDFISHGLQRLFDSLGDIEIEPDY 569
               +++   +  F KEAS++FFDE GL+SHQ+NS+NDFISHGLQ LFDSLG++ +EP Y
Sbjct: 78  EFPIDMSLTSLEKFCKEASRSFFDEIGLISHQINSYNDFISHGLQELFDSLGEVTVEPSY 137

Query: 568 NPKNKGSDGNWRRGIITLGEVTVEKPSY-----TDKDGNRVNLKPSEARLRNMTYSSPVY 404
           +P  KG  G WR  II  G+V +++P +      DK    + LKP  ARL+NMTYSS + 
Sbjct: 138 DPSKKG-PGGWRHAIIKFGKVKLQEPVFWSDKCEDKYEEALKLKPRHARLQNMTYSSKME 196

Query: 403 VDAKIKTYLNDSPKVDSKSKASTSFLSKGGKYSSNILDQSKRILIGRIPVMVKSKLCHLY 224
           V+  I+ Y      ++   KA T     G K   +I++++  + +GR+PVMV S LC L+
Sbjct: 197 VEMNIQVY-----SMEKSDKAKTENDHFGHK--RDIINETHWVSVGRLPVMVNSNLCWLH 249

Query: 223 GLGPEQLLKERDCYFDLGGYFIIKGHEKVFIAQEERCNTRIWVQNKPVWMAVY 65
            LG      E DC FD GGYF+IKG EK+FIAQE+RC TRIWV ++P W   Y
Sbjct: 250 KLG------ESDCLFDSGGYFLIKGMEKIFIAQEQRCLTRIWVDDRPCWTVSY 296


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