BLASTX nr result

ID: Ephedra29_contig00017122 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00017122
         (242 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABR18059.1 unknown [Picea sitchensis]                                  83   7e-17
XP_019706780.1 PREDICTED: polygalacturonase-like [Elaeis guineen...    81   3e-16
GAV57296.1 Glyco_hydro_28 domain-containing protein [Cephalotus ...    81   4e-16
XP_010906126.1 PREDICTED: polygalacturonase-like [Elaeis guineen...    80   6e-16
XP_008461801.1 PREDICTED: polygalacturonase-like [Cucumis melo]        80   6e-16
XP_017251584.1 PREDICTED: polygalacturonase-like [Daucus carota ...    80   6e-16
XP_008387320.1 PREDICTED: polygalacturonase-like [Malus domestica]     80   7e-16
XP_019079764.1 PREDICTED: polygalacturonase-like isoform X3 [Vit...    79   7e-16
XP_019079763.1 PREDICTED: polygalacturonase-like isoform X2 [Vit...    79   8e-16
XP_019079762.1 PREDICTED: polygalacturonase QRT2-like isoform X1...    79   8e-16
XP_018497809.1 PREDICTED: polygalacturonase isoform X2 [Pyrus x ...    80   8e-16
XP_009379633.1 PREDICTED: polygalacturonase isoform X1 [Pyrus x ...    80   8e-16
XP_008359552.1 PREDICTED: polygalacturonase-like [Malus domestica]     80   1e-15
KCW59788.1 hypothetical protein EUGRSUZ_H025371, partial [Eucaly...    78   1e-15
XP_002878158.1 endo-polygalacturonase 1 [Arabidopsis lyrata subs...    79   1e-15
CAD21651.2 endo polygalacturonase [Brassica rapa subsp. rapa]          79   1e-15
NP_001303181.1 polygalacturonase ADPG1-like precursor [Brassica ...    79   1e-15
NP_001302875.1 polygalacturonase ADPG1 precursor [Brassica napus...    79   1e-15
CBI24900.3 unnamed protein product, partial [Vitis vinifera]           79   1e-15
CDY61868.1 BnaCnng38530D [Brassica napus]                              79   2e-15

>ABR18059.1 unknown [Picea sitchensis]
          Length = 493

 Score = 83.2 bits (204), Expect = 7e-17
 Identities = 39/74 (52%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
 Frame = -3

Query: 213 QDDQDSEEDGC---SHSSVSVEEFGAKGDGETDDSKAFEKAWKAACECYRSTVIIPKGKR 43
           +D+ +SE +     S + V V+EFGAKGDGE DD+KAF  AW  AC    +  ++P GK+
Sbjct: 71  EDNSNSEMNNWVPRSSNVVCVDEFGAKGDGENDDTKAFNNAWSKACSSAPAVFLVPHGKK 130

Query: 42  YLVKPITFSGPCKN 1
           YLVKPI FSGPCK+
Sbjct: 131 YLVKPIKFSGPCKS 144


>XP_019706780.1 PREDICTED: polygalacturonase-like [Elaeis guineensis]
          Length = 454

 Score = 81.3 bits (199), Expect = 3e-16
 Identities = 38/63 (60%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
 Frame = -3

Query: 186 GCSHSSVSVEEFGAKGDGETDDSKAFEKAWKAACECYRSTVI-IPKGKRYLVKPITFSGP 10
           G S   V+VE+ GAKGDG TDD++AFE AWK AC    S V+ +P+ K YL+KPITFSGP
Sbjct: 77  GYSQKVVNVEDHGAKGDGTTDDTEAFEMAWKEACSSSTSAVLMVPENKNYLLKPITFSGP 136

Query: 9   CKN 1
           CK+
Sbjct: 137 CKS 139


>GAV57296.1 Glyco_hydro_28 domain-containing protein [Cephalotus follicularis]
          Length = 450

 Score = 80.9 bits (198), Expect = 4e-16
 Identities = 33/57 (57%), Positives = 46/57 (80%)
 Frame = -3

Query: 171 SVSVEEFGAKGDGETDDSKAFEKAWKAACECYRSTVIIPKGKRYLVKPITFSGPCKN 1
           +V+V++FGAKGDG TDD++AFEKAW+ AC    + +++PK K Y +KPI FSGPCK+
Sbjct: 83  TVNVDDFGAKGDGSTDDTEAFEKAWEEACSSNGAVLVVPKAKSYRLKPIRFSGPCKS 139


>XP_010906126.1 PREDICTED: polygalacturonase-like [Elaeis guineensis]
          Length = 442

 Score = 80.5 bits (197), Expect = 6e-16
 Identities = 38/61 (62%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
 Frame = -3

Query: 180 SHSSVSVEEFGAKGDGETDDSKAFEKAWKAACECYRSTV-IIPKGKRYLVKPITFSGPCK 4
           S   V+V+ +GAKGDG TDD +AFEKAWK AC C+ S V ++P+ KRYL+KPI FSGPCK
Sbjct: 67  SRRVVNVDNYGAKGDG-TDDKEAFEKAWKEACACHSSVVFLVPEHKRYLLKPIIFSGPCK 125

Query: 3   N 1
           +
Sbjct: 126 S 126


>XP_008461801.1 PREDICTED: polygalacturonase-like [Cucumis melo]
          Length = 446

 Score = 80.5 bits (197), Expect = 6e-16
 Identities = 40/85 (47%), Positives = 60/85 (70%), Gaps = 7/85 (8%)
 Frame = -3

Query: 234 TFLDNGFQDDQDSE---EDGCSHSS----VSVEEFGAKGDGETDDSKAFEKAWKAACECY 76
           TF +  F   + ++   + G S SS    V+V++FGAKG+G+ DD+KAFE AWK AC   
Sbjct: 52  TFRNTDFHSSKTTKKRRDRGSSFSSSTKVVNVDDFGAKGNGQ-DDTKAFELAWKEACSSR 110

Query: 75  RSTVIIPKGKRYLVKPITFSGPCKN 1
           ++T+++PKG+ Y +KPITFSGPC++
Sbjct: 111 KATLLVPKGRTYYLKPITFSGPCRS 135


>XP_017251584.1 PREDICTED: polygalacturonase-like [Daucus carota subsp. sativus]
           KZM93739.1 hypothetical protein DCAR_016984 [Daucus
           carota subsp. sativus]
          Length = 469

 Score = 80.5 bits (197), Expect = 6e-16
 Identities = 35/59 (59%), Positives = 45/59 (76%)
 Frame = -3

Query: 180 SHSSVSVEEFGAKGDGETDDSKAFEKAWKAACECYRSTVIIPKGKRYLVKPITFSGPCK 4
           S  +VSV+ +GAKGDG++DD+ AFEKAWK AC    +  ++PK K+YLVK ITF GPCK
Sbjct: 96  SAKTVSVQSYGAKGDGKSDDTMAFEKAWKEACSSSGAIFMVPKNKKYLVKQITFEGPCK 154


>XP_008387320.1 PREDICTED: polygalacturonase-like [Malus domestica]
          Length = 355

 Score = 79.7 bits (195), Expect = 7e-16
 Identities = 37/69 (53%), Positives = 47/69 (68%)
 Frame = -3

Query: 207 DQDSEEDGCSHSSVSVEEFGAKGDGETDDSKAFEKAWKAACECYRSTVIIPKGKRYLVKP 28
           D+       S  +VSV +FGA+GDGETDD+KAFE AWK AC    + ++ PK K Y +KP
Sbjct: 78  DKVDSSTSSSAETVSVNDFGAEGDGETDDTKAFEMAWKVACSSKEAVMVAPK-KTYRIKP 136

Query: 27  ITFSGPCKN 1
           I FSGPCK+
Sbjct: 137 IRFSGPCKS 145


>XP_019079764.1 PREDICTED: polygalacturonase-like isoform X3 [Vitis vinifera]
          Length = 258

 Score = 78.6 bits (192), Expect = 7e-16
 Identities = 33/60 (55%), Positives = 45/60 (75%)
 Frame = -3

Query: 180 SHSSVSVEEFGAKGDGETDDSKAFEKAWKAACECYRSTVIIPKGKRYLVKPITFSGPCKN 1
           S   V+VE FGA+GDGETDD++AF+KAW   C    + +++P+ K+  VKPITFSGPCK+
Sbjct: 89  SQGEVNVENFGAEGDGETDDTEAFKKAWDETCSSNTAVLVVPENKKCHVKPITFSGPCKS 148


>XP_019079763.1 PREDICTED: polygalacturonase-like isoform X2 [Vitis vinifera]
          Length = 261

 Score = 78.6 bits (192), Expect = 8e-16
 Identities = 33/60 (55%), Positives = 45/60 (75%)
 Frame = -3

Query: 180 SHSSVSVEEFGAKGDGETDDSKAFEKAWKAACECYRSTVIIPKGKRYLVKPITFSGPCKN 1
           S   V+VE FGA+GDGETDD++AF+KAW   C    + +++P+ K+  VKPITFSGPCK+
Sbjct: 89  SQGEVNVENFGAEGDGETDDTEAFKKAWDETCSSNTAVLVVPENKKCHVKPITFSGPCKS 148


>XP_019079762.1 PREDICTED: polygalacturonase QRT2-like isoform X1 [Vitis vinifera]
          Length = 262

 Score = 78.6 bits (192), Expect = 8e-16
 Identities = 33/60 (55%), Positives = 45/60 (75%)
 Frame = -3

Query: 180 SHSSVSVEEFGAKGDGETDDSKAFEKAWKAACECYRSTVIIPKGKRYLVKPITFSGPCKN 1
           S   V+VE FGA+GDGETDD++AF+KAW   C    + +++P+ K+  VKPITFSGPCK+
Sbjct: 89  SQGEVNVENFGAEGDGETDDTEAFKKAWDETCSSNTAVLVVPENKKCHVKPITFSGPCKS 148


>XP_018497809.1 PREDICTED: polygalacturonase isoform X2 [Pyrus x bretschneideri]
          Length = 462

 Score = 80.1 bits (196), Expect = 8e-16
 Identities = 37/69 (53%), Positives = 48/69 (69%)
 Frame = -3

Query: 207 DQDSEEDGCSHSSVSVEEFGAKGDGETDDSKAFEKAWKAACECYRSTVIIPKGKRYLVKP 28
           D+       S  +VSV +FGA+ DGETDD+KAFEKAWK AC    + +++PK K Y +KP
Sbjct: 78  DKVDSSTSSSAETVSVYDFGAEDDGETDDTKAFEKAWKVACSSKEAVLVVPK-KTYRIKP 136

Query: 27  ITFSGPCKN 1
           I FSGPCK+
Sbjct: 137 IRFSGPCKS 145


>XP_009379633.1 PREDICTED: polygalacturonase isoform X1 [Pyrus x bretschneideri]
          Length = 469

 Score = 80.1 bits (196), Expect = 8e-16
 Identities = 37/69 (53%), Positives = 48/69 (69%)
 Frame = -3

Query: 207 DQDSEEDGCSHSSVSVEEFGAKGDGETDDSKAFEKAWKAACECYRSTVIIPKGKRYLVKP 28
           D+       S  +VSV +FGA+ DGETDD+KAFEKAWK AC    + +++PK K Y +KP
Sbjct: 78  DKVDSSTSSSAETVSVYDFGAEDDGETDDTKAFEKAWKVACSSKEAVLVVPK-KTYRIKP 136

Query: 27  ITFSGPCKN 1
           I FSGPCK+
Sbjct: 137 IRFSGPCKS 145


>XP_008359552.1 PREDICTED: polygalacturonase-like [Malus domestica]
          Length = 469

 Score = 79.7 bits (195), Expect = 1e-15
 Identities = 37/69 (53%), Positives = 47/69 (68%)
 Frame = -3

Query: 207 DQDSEEDGCSHSSVSVEEFGAKGDGETDDSKAFEKAWKAACECYRSTVIIPKGKRYLVKP 28
           D+       S  +VSV +FGA+GDGETDD+KAFE AWK AC    + ++ PK K Y +KP
Sbjct: 78  DKVDSSTSSSAETVSVNDFGAEGDGETDDTKAFEMAWKVACSSKEAVMVAPK-KTYRIKP 136

Query: 27  ITFSGPCKN 1
           I FSGPCK+
Sbjct: 137 IRFSGPCKS 145


>KCW59788.1 hypothetical protein EUGRSUZ_H025371, partial [Eucalyptus grandis]
          Length = 239

 Score = 77.8 bits (190), Expect = 1e-15
 Identities = 34/56 (60%), Positives = 44/56 (78%)
 Frame = -3

Query: 174 SSVSVEEFGAKGDGETDDSKAFEKAWKAACECYRSTVIIPKGKRYLVKPITFSGPC 7
           S  +V  FGAKGDG +DDSKAF  AWKAAC+   +T++IP+G ++LVKPI+F GPC
Sbjct: 13  SMFNVLSFGAKGDGVSDDSKAFSAAWKAACQVPSATLVIPQGLKFLVKPISFKGPC 68


>XP_002878158.1 endo-polygalacturonase 1 [Arabidopsis lyrata subsp. lyrata]
           EFH54417.1 endo-polygalacturonase 1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 431

 Score = 79.3 bits (194), Expect = 1e-15
 Identities = 38/69 (55%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
 Frame = -3

Query: 204 QDSEEDGCSHSSVSVEEFGAKGDGETDDSKAFEKAWKAACECYR-STVIIPKGKRYLVKP 28
           + S+E     S+VSV  FGAKGDG+TDD++AF+KAWK AC     +T +IPKGK YL+K 
Sbjct: 56  KSSDETTLESSTVSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVTTFLIPKGKTYLLKS 115

Query: 27  ITFSGPCKN 1
             F GPCK+
Sbjct: 116 TRFRGPCKS 124


>CAD21651.2 endo polygalacturonase [Brassica rapa subsp. rapa]
          Length = 433

 Score = 79.3 bits (194), Expect = 1e-15
 Identities = 38/69 (55%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
 Frame = -3

Query: 204 QDSEEDGCSHSSVSVEEFGAKGDGETDDSKAFEKAWKAACECYR-STVIIPKGKRYLVKP 28
           + S+      S+VSV  FGAKGDG+TDD++AF+KAWK AC     +T +IPKGK YL+K 
Sbjct: 57  KSSDRPTTESSTVSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVTTFLIPKGKTYLLKS 116

Query: 27  ITFSGPCKN 1
           I F GPCK+
Sbjct: 117 IRFRGPCKS 125


>NP_001303181.1 polygalacturonase ADPG1-like precursor [Brassica napus]
           XP_013590710.1 PREDICTED: polygalacturonase ADPG1
           [Brassica oleracea var. oleracea] CAA65072.1
           polygalacturonase [Brassica napus] CAA67020.1
           endo-polygalacturonidase [Brassica napus]
          Length = 433

 Score = 79.3 bits (194), Expect = 1e-15
 Identities = 38/69 (55%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
 Frame = -3

Query: 204 QDSEEDGCSHSSVSVEEFGAKGDGETDDSKAFEKAWKAACECYR-STVIIPKGKRYLVKP 28
           + S+      S+VSV  FGAKGDG+TDD++AF+KAWK AC     +T +IPKGK YL+K 
Sbjct: 57  KSSDRPTTESSTVSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVTTFLIPKGKTYLLKS 116

Query: 27  ITFSGPCKN 1
           I F GPCK+
Sbjct: 117 IRFRGPCKS 125


>NP_001302875.1 polygalacturonase ADPG1 precursor [Brassica napus] XP_009104062.1
           PREDICTED: polygalacturonase ADPG1 [Brassica rapa]
           XP_013746699.1 PREDICTED: polygalacturonase ADPG1
           [Brassica napus] CAA90272.1 Polygalacturonase [Brassica
           napus] CDX67693.1 BnaA07g17330D [Brassica napus]
          Length = 433

 Score = 79.3 bits (194), Expect = 1e-15
 Identities = 38/69 (55%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
 Frame = -3

Query: 204 QDSEEDGCSHSSVSVEEFGAKGDGETDDSKAFEKAWKAACECYR-STVIIPKGKRYLVKP 28
           + S+      S+VSV  FGAKGDG+TDD++AF+KAWK AC     +T +IPKGK YL+K 
Sbjct: 57  KSSDRPTTESSTVSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVTTFLIPKGKTYLLKS 116

Query: 27  ITFSGPCKN 1
           I F GPCK+
Sbjct: 117 IRFRGPCKS 125


>CBI24900.3 unnamed protein product, partial [Vitis vinifera]
          Length = 317

 Score = 78.6 bits (192), Expect = 1e-15
 Identities = 33/60 (55%), Positives = 45/60 (75%)
 Frame = -3

Query: 180 SHSSVSVEEFGAKGDGETDDSKAFEKAWKAACECYRSTVIIPKGKRYLVKPITFSGPCKN 1
           S   V+VE FGA+GDGETDD++AF+KAW   C    + +++P+ K+  VKPITFSGPCK+
Sbjct: 81  SQGEVNVENFGAEGDGETDDTEAFKKAWDETCSSNTAVLVVPENKKCHVKPITFSGPCKS 140


>CDY61868.1 BnaCnng38530D [Brassica napus]
          Length = 549

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 38/69 (55%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
 Frame = -3

Query: 204 QDSEEDGCSHSSVSVEEFGAKGDGETDDSKAFEKAWKAACECYR-STVIIPKGKRYLVKP 28
           + S+      S+VSV  FGAKGDG+TDD++AF+KAWK AC     +T +IPKGK YL+K 
Sbjct: 57  KSSDRPTTESSTVSVSNFGAKGDGKTDDTQAFKKAWKKACSTNGVTTFLIPKGKTYLLKS 116

Query: 27  ITFSGPCKN 1
           I F GPCK+
Sbjct: 117 IRFRGPCKS 125


Top