BLASTX nr result
ID: Ephedra29_contig00016930
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra29_contig00016930 (1963 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value XP_010251272.1 PREDICTED: DNA-directed RNA polymerase III subuni... 353 e-111 XP_001775586.1 predicted protein [Physcomitrella patens] EDQ5953... 350 e-110 XP_010662742.1 PREDICTED: DNA-directed RNA polymerase III subuni... 342 e-107 OAE35426.1 hypothetical protein AXG93_2587s1410 [Marchantia poly... 330 e-102 XP_006859054.1 PREDICTED: DNA-directed RNA polymerase III subuni... 330 e-102 XP_010924543.1 PREDICTED: DNA-directed RNA polymerase III subuni... 325 e-100 XP_018830792.1 PREDICTED: DNA-directed RNA polymerase III subuni... 325 e-100 XP_008793119.1 PREDICTED: DNA-directed RNA polymerase III subuni... 322 3e-99 EOY23205.1 RNA polymerase III subunit RPC82 family protein, puta... 321 9e-99 GAQ82610.1 RNA polymerase III subunit RPC82 family protein [Kleb... 321 2e-98 XP_007038704.2 PREDICTED: DNA-directed RNA polymerase III subuni... 319 5e-98 XP_018830793.1 PREDICTED: DNA-directed RNA polymerase III subuni... 318 4e-97 OMO97858.1 RNA polymerase III Rpc82, C -terminal [Corchorus olit... 310 2e-94 XP_012484103.1 PREDICTED: DNA-directed RNA polymerase III subuni... 309 3e-94 XP_010035145.1 PREDICTED: DNA-directed RNA polymerase III subuni... 308 7e-94 KCW46437.1 hypothetical protein EUGRSUZ_K00269 [Eucalyptus grand... 308 2e-93 XP_016668418.1 PREDICTED: DNA-directed RNA polymerase III subuni... 306 3e-93 XP_017611851.1 PREDICTED: DNA-directed RNA polymerase III subuni... 306 4e-93 GAV79297.1 RNA_pol_Rpc82 domain-containing protein/HTH_9 domain-... 306 9e-93 XP_006421933.1 hypothetical protein CICLE_v10004721mg [Citrus cl... 305 1e-92 >XP_010251272.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Nelumbo nucifera] Length = 531 Score = 353 bits (907), Expect = e-111 Identities = 221/563 (39%), Positives = 313/563 (55%), Gaps = 18/563 (3%) Frame = +2 Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241 M ++ + +LA LI SHFGDLV KVC CL+ KG LTL ++ +FTEL +Q+KNCLLVLIQ Sbjct: 1 MATQYSIKLAISLISSHFGDLVAKVCECLLRKGSLTLADITRFTELPQAQVKNCLLVLIQ 60 Query: 242 HNCVQGFKISSDDG-SATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418 HNCVQ F I + G A K TQY D +LHRMRFPKFL+ V Sbjct: 61 HNCVQAFSIQIEGGVGAAPKVITQYTAIFDNILHRMRFPKFLTIVSEELDKECEEILEGL 120 Query: 419 XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI-PPRSS 595 HGRL+ +Q+ RA + E ++A + ESF ++V +H+VERCP +EP + PP Sbjct: 121 FQHGRLTLEQIILRAVSNQNEGNSTVQDA-VRESFVRIVSSHYVERCPASEPFLAPPDEE 179 Query: 596 VDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLPKRNDHHTG------- 754 +P KK + A +L ET E+R +AA+ + ERF D +G Sbjct: 180 ENPTKKRAKSA----RLAEEIETLEKRAISAAAPLESERFAVITDTGTDVKSGDRSGSRF 235 Query: 755 ---AFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAG 925 A G+KRK+ LE D T + E LWR N+ F+ R R KACVA R+R+D A Sbjct: 236 LDTAIGEKRKHEALEMDRETMATICEKEVLWRANFEAFIRRLRHKACVANVRARMDDGAC 295 Query: 926 TVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQV 1105 TVL+ M ATR+ + K + S PLS + I V S+ G MTV+R+R +L Q+ Sbjct: 296 TVLNAMLEATRNAESRIKTENSVPLSMDAILAEVMKSEGGRSMTVERVRAAL-----GQL 350 Query: 1106 GFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGPM-EQSKI 1282 G S ++ +++R II++ Q E+E+IV R+G ++ RIF +LS G + E KI Sbjct: 351 GCRSSPRGAEDSHSVDLRNIIEIAQNDEMESIVLKRYGRDAYRIFRLLSKTGRLVETDKI 410 Query: 1283 AGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMY 1462 + +D +++ +LY L KD YL ++++ T+ + F LW+VN S+L QI+D+M Sbjct: 411 SDITFVDKKEAPKILYNLWKDNYLHMEKL--TSQGSKQSDFLLWKVNRSSLWKQILDEMC 468 Query: 1463 HAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQR-----EQAERIR 1627 HAALNL QRLA + + I+ L +R ++ ERIR Sbjct: 469 HAALNLSQRLAY--------------------EFEQEHEILQLPREKRVGAQGKRFERIR 508 Query: 1628 KIATILETSLLKLDDSILLFDCF 1696 K+ ILE+SL+KLDD+I+LF F Sbjct: 509 KVKVILESSLMKLDDAIMLFHDF 531 >XP_001775586.1 predicted protein [Physcomitrella patens] EDQ59533.1 predicted protein, partial [Physcomitrella patens] Length = 520 Score = 350 bits (899), Expect = e-110 Identities = 208/536 (38%), Positives = 304/536 (56%), Gaps = 14/536 (2%) Frame = +2 Query: 131 KVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQHNCVQGFKISSDD-GSATGKAPT 307 KV CLVY+G L L ++A+F+ELNPS LK+ LLVL+QH+CVQ +K+ + GSA + T Sbjct: 3 KVVKCLVYRGPLALADIARFSELNPSTLKSSLLVLVQHSCVQAYKVEHEGVGSAPPRVST 62 Query: 308 QYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXXXHGRLSFDQLKERAKAQSAERK 487 Y D +LHRMRFPKFL VR HGRL+ +Q+ +R A++ ++ Sbjct: 63 SYVPLCDNILHRMRFPKFLLAVREDLGEEVGSLVEGLLEHGRLTLEQITQRTAAKAGKKV 122 Query: 488 DGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPR-SSVDPKKKAPRGATRR----IKLDV 652 G++E+F KLV A F+ERCP AEP + P+ S+V+P KK PRGA + + Sbjct: 123 ----VKGVKETFAKLVAARFIERCPAAEPSLQPKDSNVEPPKKVPRGAAKARGPILSAQD 178 Query: 653 NFETEEQRIAAAASLPDVERFNFYLPKRNDHHTGAFGKKRKYVTLEEDSRTGMPS----- 817 QRI AA+ + +RF + G V E + +P Sbjct: 179 TVSEVVQRILKAAAPDETDRFRLPISMA--------GMSAPIVDNETTDPSSLPQKVNDI 230 Query: 818 --DDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDRMFCATRSIATTGKQDTS 991 D+ E LWRVN+ +F+ + R + CV R+RLD A +L M AT + T+ +Q S Sbjct: 231 LIDEKEVLWRVNFEQFLRKLRHQTCVDMVRTRLDAGAAIILSAMLQATGNQETSARQHHS 290 Query: 992 APLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGFLSRTGDHSGNYIINIRRIIQ 1171 PLS + IT AVRS+ +G MT++RIR + Q+ S VGFL++ G+ +Y IN+ II+ Sbjct: 291 VPLSMDAITQAVRSTPDGQHMTLERIRGLVAQLASDGVGFLAKAGEGGNSYAINMHNIIE 350 Query: 1172 VTQTSEVEAIVSNRFGAESRRIFSMLSMNGPMEQSKIAGKALLDARQSLGVLYRLLKDGY 1351 Q +EVE IV RFG E RI+ +L++ G +EQ +I G+ + + +LYRLLK+ Y Sbjct: 351 ARQRNEVEGIVLQRFGRECCRIYRLLAIKGQLEQKQI-GERAMAPKNVKELLYRLLKEQY 409 Query: 1352 LQL-QEIARTNDHAPAKTFYLWRVNESALKAQIVDDMYHAALNLVQRLAXXXXXXXXXXX 1528 +Q+ QEIA+T++H +K+ YLW+VN A+ +++DD+YHAA NL R A Sbjct: 410 VQVQQEIAKTSEHIASKSIYLWKVNYRAVLYRVLDDLYHAATNLCLRHAHEIQKEQEVGL 469 Query: 1529 XXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIATILETSLLKLDDSILLFDCF 1696 ++ P+ + Q++Q +RI +I IL+ SLLKLDD+ILLF F Sbjct: 470 FMITI-----NTYTHPPLSQAAPAQQDQVKRISRITKILDASLLKLDDAILLFHDF 520 >XP_010662742.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Vitis vinifera] CBI22720.3 unnamed protein product, partial [Vitis vinifera] Length = 524 Score = 342 bits (877), Expect = e-107 Identities = 222/560 (39%), Positives = 318/560 (56%), Gaps = 15/560 (2%) Frame = +2 Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241 M ++ QLA LI SHFG+LV KVC+CL+ KG LTL + +FTEL P Q+K+C+LVLIQ Sbjct: 1 MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60 Query: 242 HNCVQGFKISSDDGSATGKAP---TQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXX 412 HNCVQ F I + G G+AP TQY +LHRMRF KFL+ V Sbjct: 61 HNCVQAFAIQQEVG--FGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILE 118 Query: 413 XXXXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI-PPR 589 HGRL+ +Q+ +RAK+ +E + ++A L ESF KLV AHFVERCP +EP + PP Sbjct: 119 GLLQHGRLTLEQILDRAKSNQSEGEPVVQDA-LRESFLKLVRAHFVERCPASEPFLAPPS 177 Query: 590 SSVDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL---PKRNDHHTGAF 760 P +K RGA + KL +T EQR AAA+ D +RF+ + +D Sbjct: 178 EEETPARK--RGA-KSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGTDVDDSPNVTA 234 Query: 761 GKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDR 940 G+KRK LE D TG S + + LWR N+ EFV R KAC+A ++RLD A VL Sbjct: 235 GEKRKQDALELDKETG-ASCEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSA 293 Query: 941 MFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSPQVGFLS 1117 M ATRS K + S PLS + I V S+ G MT++R+R SL+Q+ C+P V + Sbjct: 294 MLEATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRGAA 353 Query: 1118 RTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMN-GPMEQSKIAGKA 1294 +Y ++++ II++ Q EVE+I R+G ++ RIF +LS + +E KI+ Sbjct: 354 E------SYSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISDTT 407 Query: 1295 LLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKT-FYLWRVNESALKAQIVDDMYHAA 1471 ++ + + +LY+L KD YLQ++++ N H ++ F LW+V + L ++++MYH+A Sbjct: 408 FVEKKDTAKILYQLWKDEYLQMEKL---NLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSA 464 Query: 1472 LNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQA-----ERIRKIA 1636 LNL R+A + +Q II L +R A ER+RK+ Sbjct: 465 LNLSLRVAY--------------------ELEQEQEIIQLPREKRVGALGNRFERLRKVR 504 Query: 1637 TILETSLLKLDDSILLFDCF 1696 +LE+SL+KLDD+I+LF+ F Sbjct: 505 ILLESSLMKLDDAIMLFNDF 524 >OAE35426.1 hypothetical protein AXG93_2587s1410 [Marchantia polymorpha subsp. polymorpha] Length = 508 Score = 330 bits (845), Expect = e-102 Identities = 200/516 (38%), Positives = 290/516 (56%), Gaps = 19/516 (3%) Frame = +2 Query: 197 LNPSQLKNCLLVLIQHNCVQGFKISSDD-GSATGKAPTQYAIFLDTVLHRMRFPKFLSTV 373 +N +QL+NCLLVL+QHNCVQGFKI + G K T Y D +LHRMRFPKFLS V Sbjct: 1 MNITQLRNCLLVLVQHNCVQGFKIFQEAVGPNPPKVLTSYLGLTDNILHRMRFPKFLSIV 60 Query: 374 RXXXXXXXXXXXXXXXXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVE 553 R HGRL+ +Q+ +RA A+ A + + E L+++F LV +H++E Sbjct: 61 RDELGEEAEALLEGLLEHGRLTLEQVVQRAAAR-AGKAESEVELPLKQTFAALVRSHYIE 119 Query: 554 RCPVAEPVIPPRSSVDPKKKAPRGATRR-----IKLDVNFETEEQRIAAAASLPDVERFN 718 RCP +EP + P++ ++P KK PRG + + N E++ RI + A+ D ERF Sbjct: 120 RCPASEPTVAPKA-IEPPKKVPRGPNSKGRAAKVAAIKNLESDYDRIVSVAAALDTERFR 178 Query: 719 FYLPKRNDHHTGAF----------GKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNR 868 TG G+KRK L D++T D+ E LWR NY E + + Sbjct: 179 MPSSLEEVGETGGGDVSMTDPVVPGQKRKRDALAMDAKTMAIVDEKEVLWRANYEELIRK 238 Query: 869 FRQKACVAQARSRLDVSAGTVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGL 1048 R +ACVAQ ++R+D +AG+VL M TRS TT K SAPLS I AV + EG Sbjct: 239 LRHQACVAQVKTRIDAAAGSVLAAMLEMTRSSETTSKPQVSAPLSMTVIMQAVTMTPEGR 298 Query: 1049 GMTVDRIRTSLLQMCSPQVGFLSRTGDHSGNYIIN-IRRIIQV--TQTSEVEAIVSNRFG 1219 MT++RIR +L QM VGF++RTG+ +YII+ R+ ++ + S ++A+ Sbjct: 299 TMTMERIRGALHQMAQETVGFITRTGEGGSSYIISGGHRVTEIWTGKLSNIQALDDEGAD 358 Query: 1220 AESRRIFSMLSMNGPMEQSKIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAK 1399 +++ M IAG A++ + + +LYRLLK+ Y+ +QE+A+T +H+ K Sbjct: 359 GTKTGQLNVVLMT-------IAGMAMVQLKDARELLYRLLKEQYVVVQEVAKTAEHSAQK 411 Query: 1400 TFYLWRVNESALKAQIVDDMYHAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQP 1579 + YLW +N +K ++DDMYHAA NL QRL+ A + G + Sbjct: 412 SIYLWNINWDVVKLLVLDDMYHAAGNLQQRLS--HELEQEQEVLELLKQIQAAKAAGAET 469 Query: 1580 IITLSNRQREQAERIRKIATILETSLLKLDDSILLF 1687 +TL+ RQ EQ +RIR++A+ILE SLLKLD++ILLF Sbjct: 470 HVTLTQRQHEQVKRIRRVASILEASLLKLDNAILLF 505 >XP_006859054.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Amborella trichopoda] ERN20521.1 hypothetical protein AMTR_s00068p00192690 [Amborella trichopoda] Length = 515 Score = 330 bits (845), Expect = e-102 Identities = 215/561 (38%), Positives = 304/561 (54%), Gaps = 16/561 (2%) Frame = +2 Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241 MV+ A+QLA +LI S FGDLV KVC CL+ KG L L LA TEL QLK CLLVLIQ Sbjct: 1 MVANQARQLAVDLITSDFGDLVAKVCKCLLKKGALPLARLAMETELPREQLKKCLLVLIQ 60 Query: 242 HNCVQGFKISSDDGSATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXX 421 HNCVQ F+ + G + T+Y LD ++HR+RFPKFL +R Sbjct: 61 HNCVQAFQTKKEVGGRV-MSTTEYTALLDDIIHRLRFPKFLILIRDQFDEQCECLLGILL 119 Query: 422 XHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEP--VIPPRSS 595 HGR +F+QL +R E G + F KLV A +VERCP +EP V+ Sbjct: 120 SHGRSTFEQLMQRLFENQPE-VSGDITDQMRTRFAKLVQARYVERCPASEPQLVLDSEEG 178 Query: 596 VDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLPKRNDHHTGA------ 757 KKK T+E+R AA+ + ERF+F ND T + Sbjct: 179 TITKKKLK-----------EIVTDEERAVMAAAPLEAERFSFPTYSDNDASTESEIMADQ 227 Query: 758 ---FGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGT 928 G+KRK +E D + + + + + LWR N+ EFV R KAC+A R RLD+ A Sbjct: 228 SILVGEKRKRGVMEMDDDSIVLACEKDVLWRANFEEFVCSLRHKACIANVRPRLDIGAAV 287 Query: 929 VLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVG 1108 VL+ + TR+ K + SAP S I A+ S G ++ +R +L Q+ + Sbjct: 288 VLEAILKETRAKEKQNKAEYSAPFSMNSIVQALLGSPHG---HLEHVRAALNQLGA---- 340 Query: 1109 FLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLS-MNGPMEQSKIA 1285 S TG G+Y I++++II+ Q SE+E+IV R+G+E RIF +L+ NG +EQ +I Sbjct: 341 --SCTGATEGSYRISLKKIIEAAQNSEMESIVLKRYGSEGCRIFRLLADKNGMIEQKQIP 398 Query: 1286 GKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMYH 1465 AL++ +++ +LY+L+KD YLQ++E+A A K F LWRVN S+L+ +I++DMYH Sbjct: 399 NLALIETKKAFELLYKLMKDDYLQMEEVA----SAQGKLF-LWRVNRSSLQEKILNDMYH 453 Query: 1466 AALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNR----QREQAERIRKI 1633 AA NL QRLA ++++ + + NR Q ++ +RIRK+ Sbjct: 454 AASNLCQRLAH-------------------ETTEEHELQLLKKNRITELQEKKVDRIRKV 494 Query: 1634 ATILETSLLKLDDSILLFDCF 1696 ILE S+L+LDDSI+LF F Sbjct: 495 KPILEASILRLDDSIMLFHNF 515 >XP_010924543.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc3 [Elaeis guineensis] Length = 518 Score = 325 bits (832), Expect = e-100 Identities = 208/556 (37%), Positives = 291/556 (52%), Gaps = 11/556 (1%) Frame = +2 Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241 M + +LA LI +HFGDLV KVC+CL+++G LTL E+ +FTEL+ SQ+KNCLLVLIQ Sbjct: 1 MAGQCGLKLAVSLITTHFGDLVAKVCSCLLHRGTLTLQEIIRFTELSSSQVKNCLLVLIQ 60 Query: 242 HNCVQGFKISSDDG-SATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418 HNCVQ F G KA TQY D +LHRMRF KFL+ VR Sbjct: 61 HNCVQAFSTPRPAGPGGVTKAVTQYMALFDNILHRMRFAKFLAVVRDDLGPRCEILLAGL 120 Query: 419 XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSV 598 +GRL+F QL ERA + E E GL +F +LV + +VERCP EP I P Sbjct: 121 LQNGRLTFGQLVERASSNKPEVSASMRE-GLRANFNRLVSSRYVERCPRPEPFIDP---- 175 Query: 599 DPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLP--------KRNDHHTG 754 P+++ R K + EQ+ AA+L D ERF+ K DH Sbjct: 176 SPQEETRSTRKRSAKTSEEMLSVEQQAMVAAALSDAERFSEITDTSTENIEVKATDHDPD 235 Query: 755 -AFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTV 931 + G KRKY LE D + E LWR N+ +F+ ++KACVA RS+L + AG V Sbjct: 236 VSVGDKRKYGVLEMDQEVQAVIAENEVLWRANFEKFLLCLKKKACVAHVRSKLGLDAGVV 295 Query: 932 LDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGF 1111 L+ M S K +T + + I VR+ G+ MT++ IR L Q+ Sbjct: 296 LEAMI--ESSGQQKAKDETPVRATMDSILEGVRAKPGGISMTLEHIRVIL-----DQLRC 348 Query: 1112 LSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNG-PMEQSKIAG 1288 S +Y I+++ II Q EVEA+V RFG E+ RIF +L NG P E +IA Sbjct: 349 QSCNWGGGASYSIDLKSIIDTCQNDEVEALVLTRFGKETYRIFRLLIKNGHPFETDRIAD 408 Query: 1289 KALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMYHA 1468 A ++ +++ G+LY+L KD YL ++++ + A K +LW+V + AL +++D+YHA Sbjct: 409 IAFVEKKEAQGILYKLWKDEYLDMEKV--VSHAAGQKELFLWKVKKDALWEHVLNDLYHA 466 Query: 1469 ALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIATILE 1648 ALNL Q++A +++RE+ E++R ILE Sbjct: 467 ALNLSQKIAHLVEQEHEV------------------------SQRREKPEQLRNSRMILE 502 Query: 1649 TSLLKLDDSILLFDCF 1696 SLLKLDD+++LF F Sbjct: 503 LSLLKLDDALMLFHDF 518 >XP_018830792.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc-3 isoform X1 [Juglans regia] Length = 553 Score = 325 bits (833), Expect = e-100 Identities = 211/571 (36%), Positives = 300/571 (52%), Gaps = 18/571 (3%) Frame = +2 Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241 MV+ + LI +HFG+LV KVC L+ +G LTL + ++TEL P Q+KN LL+LIQ Sbjct: 1 MVTEYGIKFTVNLINNHFGNLVAKVCENLLRRGPLTLQLIVRYTELTPQQVKNSLLILIQ 60 Query: 242 HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418 HNCVQ F D G G K+ TQY + +LHRMRF KFL + Sbjct: 61 HNCVQAFSYEQDGGLEDGPKSNTQYMALFNNILHRMRFSKFLEIISREFDDKCKELLEGL 120 Query: 419 XXHGRLSFDQLKERAKAQSAERK----DGPEEAGLEESFRKLVDAHFVERCPVAEPVIPP 586 HGRL+ Q+ ERAK + K +G E ++ES KL+ A +VERCP +EPV+ Sbjct: 121 LQHGRLTLKQMVERAKDMAERAKSRKIEGICEDLVQESLVKLLTARYVERCPASEPVLAA 180 Query: 587 RSSVDP--KKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLPKRN------- 739 R + KK+ P+ A + +T EQR+ AAA+ +RF+ + Sbjct: 181 RDKEETPAKKRGPKSA----RTAEESQTLEQRVLAAAAPMGAQRFSAITNNESSVSRETS 236 Query: 740 --DHHTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLD 913 D G KRKY LE +++ LWR N+ EF+ R KAC+ R RLD Sbjct: 237 TDDSPGMRVGAKRKYDALELHIEPAAEEEEV-VLWRANFEEFIRCLRHKACIENVRERLD 295 Query: 914 VSAGTVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM- 1090 A TVL M ATRS K + S PLS I V S+EG GMT+DR+R SL+Q+ Sbjct: 296 DGAATVLRAMLEATRSFENKVKTEKSVPLSLNNIFEEVMKSEEGRGMTLDRVRASLVQLG 355 Query: 1091 CSPQVGFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGPM- 1267 CSP +R D S Y I++++II++ Q EVE+IV R+G ++ R+F +LS NG + Sbjct: 356 CSPS----ARGTDES--YKIDLKKIIELAQNDEVESIVLKRYGRDAYRMFRLLSKNGCLV 409 Query: 1268 EQSKIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQI 1447 E KIA ++ + + +LY+L KD YL ++++ A F LW+VN+ L + Sbjct: 410 ETDKIANTTFVEKKDAPKILYKLWKDEYLHMEKLVVAG--ARQSQFLLWKVNKPCLWKHV 467 Query: 1448 VDDMYHAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIR 1627 +D+M+HAALNL QR+A P+ Q E+ R++ Sbjct: 468 LDEMFHAALNLSQRVAYEREKEKEFL---------------NLPVDKQIMSQEERLNRLK 512 Query: 1628 KIATILETSLLKLDDSILLFDCF*DPSLIPL 1720 + +LE+SLLKL D+ +LF F + SL+ L Sbjct: 513 SVRIVLESSLLKLGDAFMLFHDFEESSLLKL 543 >XP_008793119.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Phoenix dactylifera] Length = 518 Score = 322 bits (826), Expect = 3e-99 Identities = 207/556 (37%), Positives = 290/556 (52%), Gaps = 11/556 (1%) Frame = +2 Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241 M ++ +LA LI +HFGDLV KVC+CL+++G L+L E+ +FTEL+ SQ+KNCLLVL+Q Sbjct: 1 MAAQCGLKLAVSLITAHFGDLVAKVCSCLLHRGTLSLQEIIRFTELSSSQIKNCLLVLVQ 60 Query: 242 HNCVQGFKISSDDG-SATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418 HNCVQ F G KA TQY D +LHRMRF KFL+ VR Sbjct: 61 HNCVQAFSTPRPAGPGGVAKAVTQYMALFDNILHRMRFAKFLAVVRDDLGPQCEILLAGL 120 Query: 419 XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSV 598 +GRL+F QL ERA + E E GL +F +LV A +VERCP EP I P Sbjct: 121 LQNGRLTFGQLVERATSSKPEVSASMRE-GLRANFNRLVSARYVERCPRPEPFIEP---- 175 Query: 599 DPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLP--------KRNDHHTG 754 P+++ R K + EQR AA+L D ERF+ K DH + Sbjct: 176 SPQEETRSTRRRSAKTSEEILSIEQRAMVAAALSDAERFSEITDTATETIEVKATDHSSD 235 Query: 755 -AFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTV 931 + G KRKY LE D E LW+ N+ +F+ ++KACVA RSR + AG V Sbjct: 236 VSVGDKRKYGALEMDQEVQAAITQNEVLWQANFEKFLLCLKKKACVAHVRSRFGLDAGAV 295 Query: 932 LDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGF 1111 L+ M S K +T + + I VR+ G+ MT++ IR L Q+ Sbjct: 296 LEAMI--ESSGQQKAKDETPVRATMDSILEGVRAKPGGISMTLEHIRVIL-----DQLHC 348 Query: 1112 LSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNG-PMEQSKIAG 1288 S +Y I+++ II Q EVEA+V RFG E+ RIF +L NG P E +IA Sbjct: 349 QSCNWGAGASYSIDLKSIIDTCQNDEVEALVLTRFGKEAYRIFRLLIKNGHPFETDRIAD 408 Query: 1289 KALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMYHA 1468 A ++ + + G+LY+L KD YL ++++ + A K +LW+V + AL +++D+YHA Sbjct: 409 IAFVEKKDAQGILYKLWKDEYLDMEKV--VSYAAGQKELFLWKVKKDALWEHVLNDLYHA 466 Query: 1469 ALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIATILE 1648 ALNL Q++A +++RE+ E++R ILE Sbjct: 467 ALNLSQKIAHIVEQEHEV------------------------SQRREKPEQLRNGRMILE 502 Query: 1649 TSLLKLDDSILLFDCF 1696 SLLKLDD+++LF F Sbjct: 503 LSLLKLDDALMLFRDF 518 >EOY23205.1 RNA polymerase III subunit RPC82 family protein, putative isoform 1 [Theobroma cacao] Length = 523 Score = 321 bits (823), Expect = 9e-99 Identities = 207/559 (37%), Positives = 302/559 (54%), Gaps = 14/559 (2%) Frame = +2 Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241 MV+++ + A LI +HFGDLV KVC CL+ KG LTL + +FTEL SQ+KN LLVLIQ Sbjct: 1 MVTQHGIKYAVLLITTHFGDLVAKVCECLLRKGPLTLQAIVRFTELTSSQVKNSLLVLIQ 60 Query: 242 HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418 HNCVQ F + G K +QY + ++HR RFPKFL+ V Sbjct: 61 HNCVQAFILEQPGSHGDGAKLNSQYIALFNNIIHRWRFPKFLTIVSQKLDKQCVELIEAL 120 Query: 419 XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI--PPRS 592 HGRL+ Q+ +RAK+ E D +A + E+F KL++AHFVERCP AEPV+ P Sbjct: 121 LLHGRLTLKQMSDRAKSAQNEGDDVILDA-VREAFIKLLNAHFVERCPAAEPVLTKPTEE 179 Query: 593 SVDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL---------PKRNDH 745 +K+ P+ A K+ ET EQR+ AA+ + RF N+ Sbjct: 180 ETSARKRVPKSA----KILEGKETLEQRVLEAATPSEALRFLLVTRTEPAADGGKDENNS 235 Query: 746 HTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAG 925 + GKKRK LE ++ G +D+ LWR N+ EF+ R R KA + R+ LD A Sbjct: 236 SSMTVGKKRKLDALESETE-GEATDEQVVLWRANFEEFIRRLRHKAFIENVRACLDDGAV 294 Query: 926 TVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSPQ 1102 V+ M ATR+ K + S PLS I V S+EG +T DR+R SL+Q+ C P Sbjct: 295 IVISAMLEATRTAEKKVKTENSVPLSLNSIYEEVIKSEEGRNITFDRVRASLVQLSCPPF 354 Query: 1103 VGFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGP-MEQSK 1279 V ++ +Y I+ ++II++ Q EVE+IV R+G ++ R+F +LS +E K Sbjct: 355 VKAVNE------SYSIDFKKIIELAQNDEVESIVLKRYGRDAYRMFRLLSSTARLLETDK 408 Query: 1280 IAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDM 1459 IA A ++ + + +LY+L KD YL ++++ T A F LW+VN++ L ++D+M Sbjct: 409 IADTAFVEKKDTTKILYKLWKDDYLHMEKLQLTG--ARQSQFLLWKVNKNTLWEHVLDEM 466 Query: 1460 YHAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIAT 1639 +HAALNL R+A + +Q L+ Q ++ R+RK+ Sbjct: 467 FHAALNLSLRVA----------------------HELEQEKELLNLPQDKRVNRLRKVRL 504 Query: 1640 ILETSLLKLDDSILLFDCF 1696 +LE+S +KLDD+I+LF F Sbjct: 505 LLESSQMKLDDAIMLFHDF 523 >GAQ82610.1 RNA polymerase III subunit RPC82 family protein [Klebsormidium flaccidum] Length = 559 Score = 321 bits (823), Expect = 2e-98 Identities = 198/562 (35%), Positives = 297/562 (52%), Gaps = 17/562 (3%) Frame = +2 Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241 M S++A++LACE++ FG+ VGKVC LV+KG +LP+L + TEL P QL+NC+LVL Q Sbjct: 1 MPSKHAKKLACEIVVDQFGEQVGKVCQTLVFKGQHSLPDLGRVTELTPPQLRNCVLVLSQ 60 Query: 242 HNCVQGFKISSDDGSATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXX 421 HNCVQ +++ D + + Y + +L R+RFP+ L V+ Sbjct: 61 HNCVQAYRVEPDAENPRTRPQVLYVALVSRILQRLRFPRMLLHVKEELGPDAEAVLEGLI 120 Query: 422 XHGRLSFDQLKERAKAQSA-ERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSV 598 HGRLS QL ERA A++ E + + G++E+F++LV A +VE+ P AEPV+PP S Sbjct: 121 EHGRLSVGQLVERASARTEDEAERSAQSEGVKEAFKQLVQARYVEKAPQAEPVLPPASEG 180 Query: 599 DPKKKAPRGATRR---IKLDVNFETEEQRIAAAASLPDVERFNF---YLPKRNDHHTGAF 760 D KK A R K V E+EE R +++ D +RF L N T A Sbjct: 181 DTKKGTRINARARAAAAKASV-VESEEARAVRLSAVSDFDRFRLPSSVLGLENGAPTAAE 239 Query: 761 GK-------KRKYVTLEEDSRTG-MPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDV 916 K KR+ E+ ++ +D+ E +WRVNY EF RFR +A R+ Sbjct: 240 TKALSRTKRKREAELAEQAAQAAKQKADEEELVWRVNYDEFTRRFRHEAMSEFVEERMGP 299 Query: 917 SAGTVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCS 1096 +AG + M TR + + S P+S E I +RSS G + IRT+L Q+ Sbjct: 300 TAGAAVRTMLTETRGQEQSVAEKASGPVSVEAIHTILRSSPAGSALPKSSIRTALEQLAE 359 Query: 1097 PQVGFLSRTGD-HSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGPMEQ 1273 +++ + G Y +++ ++ + E+E++V NRFG + RIF +L M +EQ Sbjct: 360 EGSAMVTKENELGGGTYAVDMAHVVAEMRERELESVVRNRFGQGACRIFRLLRMKRMLEQ 419 Query: 1274 SKIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVD 1453 +I A++ + + +LY LLK Y+ LQE+A+T DH ++TFYLWRVN + +D Sbjct: 420 KQIGEMAMIPIKDTRQLLYTLLKGHYVSLQELAKTADHVASRTFYLWRVNIPQVSEHALD 479 Query: 1454 DMYHAALNLVQRLA-XXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRK 1630 +MYH A NL RL A G +TL++ QRE+ E+ R+ Sbjct: 480 EMYHGASNLRNRLQHELAQEKELLSICDDMAAGNAAGEHGSH--VTLTSAQRERLEQFRQ 537 Query: 1631 IATILETSLLKLDDSILLFDCF 1696 +A +LE+SLL L+ I+LF F Sbjct: 538 VAAVLESSLLALEKMIMLFSDF 559 >XP_007038704.2 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Theobroma cacao] Length = 523 Score = 319 bits (818), Expect = 5e-98 Identities = 207/559 (37%), Positives = 300/559 (53%), Gaps = 14/559 (2%) Frame = +2 Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241 MV+++ + A LI +HFGDLV KVC CL+ KG LTL + +FTEL SQ+KN LLVLIQ Sbjct: 1 MVTQHGIKYAVHLITTHFGDLVAKVCECLLRKGPLTLQAIVRFTELTSSQVKNSLLVLIQ 60 Query: 242 HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418 HNCVQ F + G K TQY + ++HR RFPKFL+ V Sbjct: 61 HNCVQAFILEQLGSHGDGAKLNTQYIALFNNIIHRWRFPKFLTIVSQKLDKQCVELFEAL 120 Query: 419 XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI--PPRS 592 HGRL+ Q+ +RAK+ E D +A + E+F KL++AHFVERCP AE V+ P Sbjct: 121 LLHGRLTLKQMSDRAKSAQNEGDDVILDA-VREAFIKLLNAHFVERCPAAESVLTKPTEE 179 Query: 593 SVDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL---------PKRNDH 745 +K+ P+ A K+ ET EQR+ AA+ + RF N+ Sbjct: 180 ETSARKRVPKSA----KILEGKETLEQRVLEAATPSEALRFLLVTRTEPAADGGKDENNS 235 Query: 746 HTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAG 925 GKKRK LE ++ G +D+ LWR N+ EF+ R R KA + R+ LD A Sbjct: 236 SNMTVGKKRKLDALESETE-GEATDEQVVLWRANFEEFIRRLRHKAFIENVRACLDDGAV 294 Query: 926 TVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSPQ 1102 V+ M ATR+ K + S PLS I V S+EG +T DR+R SL+Q+ C P Sbjct: 295 IVISAMLEATRTAEKKVKTENSVPLSLNSIYEEVIKSEEGRNITFDRVRASLVQLSCPPF 354 Query: 1103 VGFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGP-MEQSK 1279 V ++ +Y I+ ++II++ Q EVE+IV R+G ++ R+F +LS +E K Sbjct: 355 VKAVNE------SYSIDFKKIIELAQNDEVESIVLKRYGRDAYRMFRLLSSTARLLETDK 408 Query: 1280 IAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDM 1459 IA A ++ + + +LY+L KD YL ++++ T A F LW+VN++ L ++D+M Sbjct: 409 IADTAFVEKKDTTKILYKLWKDDYLHMEKLQLTG--ARQSQFLLWKVNKNTLWEHVLDEM 466 Query: 1460 YHAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIAT 1639 +HAALNL R+A + +Q L+ Q ++ R+RK+ Sbjct: 467 FHAALNLSLRVA----------------------HELEQEKELLNLPQDKRVNRLRKVRL 504 Query: 1640 ILETSLLKLDDSILLFDCF 1696 +LE+S +KLDD+I+LF F Sbjct: 505 LLESSQMKLDDAIMLFHDF 523 >XP_018830793.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc-3 isoform X2 [Juglans regia] Length = 547 Score = 318 bits (814), Expect = 4e-97 Identities = 208/571 (36%), Positives = 296/571 (51%), Gaps = 18/571 (3%) Frame = +2 Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241 MV+ + LI +HFG+LV KVC L+ +G LTL + ++TEL P Q+KN LL+LIQ Sbjct: 1 MVTEYGIKFTVNLINNHFGNLVAKVCENLLRRGPLTLQLIVRYTELTPQQVKNSLLILIQ 60 Query: 242 HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418 HNCVQ F D G G K+ TQY + +LHRMRF KFL + Sbjct: 61 HNCVQAFSYEQDGGLEDGPKSNTQYMALFNNILHRMRFSKFLEIISREFDDKCKELLEGL 120 Query: 419 XXHGRLSFDQLKERAKAQSAERK----DGPEEAGLEESFRKLVDAHFVERCPVAEPVIPP 586 HGRL+ Q+ ERAK + K +G E ++ES KL+ A +VERCP +EPV+ Sbjct: 121 LQHGRLTLKQMVERAKDMAERAKSRKIEGICEDLVQESLVKLLTARYVERCPASEPVLAA 180 Query: 587 RSSVDP--KKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLPKRN------- 739 R + KK+ P+ A + +T EQR+ AAA+ +RF+ + Sbjct: 181 RDKEETPAKKRGPKSA----RTAEESQTLEQRVLAAAAPMGAQRFSAITNNESSVSRETS 236 Query: 740 --DHHTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLD 913 D G KRKY LE +++ LWR N+ EF+ R KAC+ R RLD Sbjct: 237 TDDSPGMRVGAKRKYDALELHIEPAAEEEEV-VLWRANFEEFIRCLRHKACIENVRERLD 295 Query: 914 VSAGTVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM- 1090 A TVL M ATRS K + S PLS I V S+EG GMT+DR+R SL+Q+ Sbjct: 296 DGAATVLRAMLEATRSFENKVKTEKSVPLSLNNIFEEVMKSEEGRGMTLDRVRASLVQLG 355 Query: 1091 CSPQVGFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGPM- 1267 CSP S G ++++II++ Q EVE+IV R+G ++ R+F +LS NG + Sbjct: 356 CSP-----SARG-------TDLKKIIELAQNDEVESIVLKRYGRDAYRMFRLLSKNGCLV 403 Query: 1268 EQSKIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQI 1447 E KIA ++ + + +LY+L KD YL ++++ A F LW+VN+ L + Sbjct: 404 ETDKIANTTFVEKKDAPKILYKLWKDEYLHMEKLVVAG--ARQSQFLLWKVNKPCLWKHV 461 Query: 1448 VDDMYHAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIR 1627 +D+M+HAALNL QR+A P+ Q E+ R++ Sbjct: 462 LDEMFHAALNLSQRVAYEREKEKEFL---------------NLPVDKQIMSQEERLNRLK 506 Query: 1628 KIATILETSLLKLDDSILLFDCF*DPSLIPL 1720 + +LE+SLLKL D+ +LF F + SL+ L Sbjct: 507 SVRIVLESSLLKLGDAFMLFHDFEESSLLKL 537 >OMO97858.1 RNA polymerase III Rpc82, C -terminal [Corchorus olitorius] Length = 523 Score = 310 bits (794), Expect = 2e-94 Identities = 202/560 (36%), Positives = 306/560 (54%), Gaps = 15/560 (2%) Frame = +2 Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241 MV++ + A LI +HFGDLV KVC CL+ +G LTL L KFTEL+ SQ+KN LLVLIQ Sbjct: 1 MVTQYGIKYAVHLITTHFGDLVAKVCECLLRRGPLTLQALVKFTELSSSQVKNSLLVLIQ 60 Query: 242 HNCVQGFKISSDDGSATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXX 421 HNCVQ F D K TQY + D ++HR RFPKFL+ V Sbjct: 61 HNCVQAFLPEPGDHGDADKLNTQYIVLFDNIIHRWRFPKFLNIVSEKLDEQCVKLLEGLL 120 Query: 422 XHGRLSFDQLKERAKAQSAERKDGPEEA--GLEESFRKLVDAHFVERCPVAEPVI--PPR 589 HGRL+ Q+ +R +A+ ++K+G + + KL++A FVERCP AEPV+ P Sbjct: 121 QHGRLTLKQMSDRDRAR-LDQKEGEDVILDATRANLIKLLNARFVERCPAAEPVLAKPTE 179 Query: 590 SSVDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLPKR-------NDHH 748 +K+ P+ A K+ ET E R+ AA+ + RF ++ + Sbjct: 180 EESSARKRGPKSA----KILEENETLEHRVMDAAAPSEALRFLLVTQTESAADGGLDESN 235 Query: 749 TGAF--GKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSA 922 T + G KRK LE ++ +G +D+ LWR N+ EF+ R R +AC+ R+RLD A Sbjct: 236 TSSLKAGVKRKSDALESETESG-AADEQVLLWRANFEEFMRRLRHEACIVNLRARLDDGA 294 Query: 923 GTVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSP 1099 VL M ATRS K + S PLS I V S EG +T DR+R SL+Q+ C P Sbjct: 295 VIVLRAMLEATRSAEKKVKTEHSVPLSLNSIYEEVIKSVEGRNITFDRVRASLVQLSCPP 354 Query: 1100 QVGFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGP-MEQS 1276 V ++ +Y I+ ++II++ Q+ EVE++V R+G+++ ++F +LS G +E Sbjct: 355 FVKAINE------SYSIDFKKIIELAQSDEVESVVLKRYGSDACKMFRLLSNTGRFVETD 408 Query: 1277 KIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDD 1456 KIA L++ +++ VLY+L KD YL ++++ T F LW+V ++ ++ ++D+ Sbjct: 409 KIADSTLIEKKETPMVLYKLWKDDYLHMEKLQLTGTR--QSHFLLWKVKKNTIREHVLDE 466 Query: 1457 MYHAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIA 1636 M+HAALNL RLA + ++ +++LS R+ +R+RK+ Sbjct: 467 MFHAALNLNLRLAY--------------------EVEQEKELLSLSQDNRD--KRLRKV- 503 Query: 1637 TILETSLLKLDDSILLFDCF 1696 +L S +KLDD+I++F F Sbjct: 504 KLLSQSQMKLDDAIMIFHDF 523 >XP_012484103.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Gossypium raimondii] KJB34119.1 hypothetical protein B456_006G048800 [Gossypium raimondii] Length = 517 Score = 309 bits (792), Expect = 3e-94 Identities = 203/559 (36%), Positives = 299/559 (53%), Gaps = 14/559 (2%) Frame = +2 Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241 MV++ + A LI +HFGDLV KVC CL+ +G LTL + + TEL SQ+KN LLVLIQ Sbjct: 1 MVTQYGIKYAVNLITAHFGDLVAKVCECLLRRGPLTLQAIVRSTELTSSQVKNSLLVLIQ 60 Query: 242 HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418 HNCVQ F + G K TQY D ++ R RFPKFL+ V Sbjct: 61 HNCVQAFILDQTGEHGDGAKQSTQYIALFDNIIQRWRFPKFLTMVSKKLDKQCVELLEGL 120 Query: 419 XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI--PPRS 592 HGRL+ Q+ +RAK+ E D ++E+F KL++AHF+ERCP +EPV+ P + Sbjct: 121 LQHGRLTLKQMFDRAKSGQNEGDD-----VVQEAFVKLLNAHFIERCPASEPVLTNPTKE 175 Query: 593 SVDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL---------PKRNDH 745 +K+A + K+ ET EQR+ AA + RF F +++ Sbjct: 176 EEAARKRAAKSG----KILEVQETLEQRVVEAAMPTEALRFLFATETEPTADGGKDKSNS 231 Query: 746 HTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAG 925 + G+KRK+ +E ++ +G +D+ LWR N EF+ R KAC+ R+R D A Sbjct: 232 SSVTPGEKRKHDAIESEAESG-DTDEQVVLWRANIDEFIRHLRHKACIENVRARFDDGAV 290 Query: 926 TVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQV 1105 V M ATRS K + S PLS I V S+EG +T DR+R SL+Q+ P Sbjct: 291 IVFGAMLEATRSAEKKVKTENSVPLSLSSIYEEVIKSEEGRNITFDRVRASLVQLSCPP- 349 Query: 1106 GFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGP-MEQSKI 1282 F+ T + +Y ++ ++II++ Q EVE+IV R+G ++ R+F +LS +G +E K+ Sbjct: 350 -FVKATNE---SYSVDFKKIIELAQHEEVESIVLKRYGRDAYRMFRLLSNSGHLLETDKV 405 Query: 1283 AGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMY 1462 A ++ +++ +LY+L KD YLQL+++ P F LW+VN+S LK ++D+M+ Sbjct: 406 ADATFVEKKETPIILYKLWKDDYLQLEKLQIGVKQTP---FQLWKVNKSTLKVHVLDEMF 462 Query: 1463 HAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSN-RQREQAERIRKIAT 1639 HAA NL QR+A LSN Q ++ R+RK Sbjct: 463 HAAFNLSQRVAFELEQEK-----------------------ELSNVLQDKRVNRLRK-RL 498 Query: 1640 ILETSLLKLDDSILLFDCF 1696 +LE+S +KLDD+I+LF F Sbjct: 499 LLESSQMKLDDAIMLFHDF 517 >XP_010035145.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc3 [Eucalyptus grandis] Length = 522 Score = 308 bits (790), Expect = 7e-94 Identities = 201/548 (36%), Positives = 287/548 (52%), Gaps = 12/548 (2%) Frame = +2 Query: 89 ACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQHNCVQGFKI 268 A +I SHFGDLV KVC CL+ +G LT + +FTE++ SQ+KNCLLVLIQ NCVQ F + Sbjct: 12 AGHIISSHFGDLVAKVCECLLRRGPLTHQNIVRFTEMSASQVKNCLLVLIQQNCVQAFSV 71 Query: 269 SSDDG-SATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXXXHGRLSFD 445 G T + T+Y D ++HRMRFPKF++ V HGRL+ + Sbjct: 72 EHPGGVGDTSRRSTEYLALFDNIIHRMRFPKFVAVVSQELDKECVELFQGLLQHGRLTLE 131 Query: 446 QLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSVDPKKKAPRG 625 ++ +RAK + ++D + E+ KL +A FVE CP EP + P S P +K Sbjct: 132 KMIDRAK---SGQEDSTAQDATREALSKLANARFVEHCPDPEPHLSPPSEEAPARK---- 184 Query: 626 ATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL--------PKRNDHHTGAFGKKRKYV 781 T+ K+ ET E+R+ AAA+ + +RF K D G G+KRK Sbjct: 185 RTKSSKMVAEPETIEERVLAAATPMEAKRFLIIFDTTTEEDGQKTGDSFLGV-GEKRKSD 243 Query: 782 TLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDRMFCATRS 961 LE + G SD + LWRVN EF++RFR KACV R RLD A L M ++S Sbjct: 244 ALESNKELG--SDGEQVLWRVNVQEFMHRFRHKACVENVRERLDGGAAVALSAMLEISKS 301 Query: 962 IATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSPQVGFLSRTGDHSG 1138 + K D S PLS I V + G MT+D +R SL+ + C V Sbjct: 302 MEKKVKTDNSVPLSINTIYEEVMKGEAGRAMTLDHLRASLVMLGCEKGV---------DE 352 Query: 1139 NYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLS-MNGPMEQSKIAGKALLDARQS 1315 +Y I+++ II+ Q EVE+IV R+G E+ RIF +LS N +E KI+ A +D ++ Sbjct: 353 SYKIDLKNIIEQAQNEEVESIVLKRYGQEAYRIFRLLSKANCLLETGKISDTAFVDKKEI 412 Query: 1316 LGVLYRLLKDGYLQLQEIARTNDHAPAKT-FYLWRVNESALKAQIVDDMYHAALNLVQRL 1492 +L+RL KD +L +++I T P +T F LW+V+++ L ++D+MYHA LNL R+ Sbjct: 413 SKILFRLWKDQFLHMEKIVVT---GPRQTQFLLWKVDKTTLWPHVLDEMYHAVLNLNLRV 469 Query: 1493 AXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIATILETSLLKLDD 1672 A PI S ++ R+R + +LE+SL+KLDD Sbjct: 470 AYELEKENELL---------------NLPIEKRSGPLEKRYNRLRTVRLLLESSLMKLDD 514 Query: 1673 SILLFDCF 1696 +I+LF F Sbjct: 515 AIMLFHDF 522 >KCW46437.1 hypothetical protein EUGRSUZ_K00269 [Eucalyptus grandis] KCW46438.1 hypothetical protein EUGRSUZ_K00269 [Eucalyptus grandis] Length = 554 Score = 308 bits (790), Expect = 2e-93 Identities = 201/548 (36%), Positives = 287/548 (52%), Gaps = 12/548 (2%) Frame = +2 Query: 89 ACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQHNCVQGFKI 268 A +I SHFGDLV KVC CL+ +G LT + +FTE++ SQ+KNCLLVLIQ NCVQ F + Sbjct: 44 AGHIISSHFGDLVAKVCECLLRRGPLTHQNIVRFTEMSASQVKNCLLVLIQQNCVQAFSV 103 Query: 269 SSDDG-SATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXXXHGRLSFD 445 G T + T+Y D ++HRMRFPKF++ V HGRL+ + Sbjct: 104 EHPGGVGDTSRRSTEYLALFDNIIHRMRFPKFVAVVSQELDKECVELFQGLLQHGRLTLE 163 Query: 446 QLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSVDPKKKAPRG 625 ++ +RAK + ++D + E+ KL +A FVE CP EP + P S P +K Sbjct: 164 KMIDRAK---SGQEDSTAQDATREALSKLANARFVEHCPDPEPHLSPPSEEAPARK---- 216 Query: 626 ATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL--------PKRNDHHTGAFGKKRKYV 781 T+ K+ ET E+R+ AAA+ + +RF K D G G+KRK Sbjct: 217 RTKSSKMVAEPETIEERVLAAATPMEAKRFLIIFDTTTEEDGQKTGDSFLGV-GEKRKSD 275 Query: 782 TLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDRMFCATRS 961 LE + G SD + LWRVN EF++RFR KACV R RLD A L M ++S Sbjct: 276 ALESNKELG--SDGEQVLWRVNVQEFMHRFRHKACVENVRERLDGGAAVALSAMLEISKS 333 Query: 962 IATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSPQVGFLSRTGDHSG 1138 + K D S PLS I V + G MT+D +R SL+ + C V Sbjct: 334 MEKKVKTDNSVPLSINTIYEEVMKGEAGRAMTLDHLRASLVMLGCEKGV---------DE 384 Query: 1139 NYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLS-MNGPMEQSKIAGKALLDARQS 1315 +Y I+++ II+ Q EVE+IV R+G E+ RIF +LS N +E KI+ A +D ++ Sbjct: 385 SYKIDLKNIIEQAQNEEVESIVLKRYGQEAYRIFRLLSKANCLLETGKISDTAFVDKKEI 444 Query: 1316 LGVLYRLLKDGYLQLQEIARTNDHAPAKT-FYLWRVNESALKAQIVDDMYHAALNLVQRL 1492 +L+RL KD +L +++I T P +T F LW+V+++ L ++D+MYHA LNL R+ Sbjct: 445 SKILFRLWKDQFLHMEKIVVT---GPRQTQFLLWKVDKTTLWPHVLDEMYHAVLNLNLRV 501 Query: 1493 AXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIATILETSLLKLDD 1672 A PI S ++ R+R + +LE+SL+KLDD Sbjct: 502 AYELEKENELL---------------NLPIEKRSGPLEKRYNRLRTVRLLLESSLMKLDD 546 Query: 1673 SILLFDCF 1696 +I+LF F Sbjct: 547 AIMLFHDF 554 >XP_016668418.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform X1 [Gossypium hirsutum] Length = 517 Score = 306 bits (785), Expect = 3e-93 Identities = 202/559 (36%), Positives = 301/559 (53%), Gaps = 14/559 (2%) Frame = +2 Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241 MV++ + A LI +HFGDLV KVC CL+ KG LTL + + TEL SQ+KN LLVLIQ Sbjct: 1 MVTQYGIKYAVNLITAHFGDLVAKVCECLLRKGPLTLQAIVRSTELTSSQVKNSLLVLIQ 60 Query: 242 HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418 HNCVQ F + G K TQY D ++ R RFPKFL+ V Sbjct: 61 HNCVQAFILDQTGEHGDGAKQSTQYIALFDNIIQRWRFPKFLTMVSKKLDKQCAELLEGL 120 Query: 419 XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI--PPRS 592 HGRL+ Q+ +RAK+ ++G ++ ++E+F KL++AHF+ERCP +EPV+ P + Sbjct: 121 LQHGRLTLKQMFDRAKS----GQNGGDDV-VQEAFVKLLNAHFIERCPASEPVLTNPTKE 175 Query: 593 SVDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL---------PKRNDH 745 +K+A + K+ ET EQR+ AA + RF F +++ Sbjct: 176 EEAARKRAAKSG----KILEVQETLEQRVVEAAMPTEALRFLFATETEPTADGGKDKSNS 231 Query: 746 HTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAG 925 + G+KRK+ LE ++ G +D+ LWR N+ EF+ R KAC+ R+R D A Sbjct: 232 SSVTPGEKRKHDALESEAECG-ATDEQVVLWRANFDEFIRCLRHKACIENVRARFDDGAV 290 Query: 926 TVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQV 1105 V M ATRS K + S PLS I V S+EG +T DR+R SL+Q+ P Sbjct: 291 IVFGAMLEATRSAEKKVKTENSVPLSLSSIYEEVIKSEEGRNITFDRVRASLVQLSCPP- 349 Query: 1106 GFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGP-MEQSKI 1282 F+ + +Y ++ ++II++ Q EVE+IV R+G ++ R+F +LS +G +E K+ Sbjct: 350 -FVKAANE---SYSVDFKKIIELAQNEEVESIVLKRYGRDAYRMFRLLSNSGHLLETDKV 405 Query: 1283 AGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMY 1462 A ++ +++ +LY+L KD YLQL+++ P F LW+VN++ LK ++D+M+ Sbjct: 406 ADATFVEKKETPIILYKLWKDDYLQLEKLQIGVKQIP---FQLWKVNKNTLKVHVLDEMF 462 Query: 1463 HAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSN-RQREQAERIRKIAT 1639 HAA NL QR+A LSN Q ++ R+RK Sbjct: 463 HAAFNLSQRVAFELEQEK-----------------------ELSNVLQDKRVNRLRK-RL 498 Query: 1640 ILETSLLKLDDSILLFDCF 1696 +LE+S +KLDD+I+LF F Sbjct: 499 LLESSQMKLDDAIMLFHDF 517 >XP_017611851.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Gossypium arboreum] Length = 517 Score = 306 bits (784), Expect = 4e-93 Identities = 203/559 (36%), Positives = 301/559 (53%), Gaps = 14/559 (2%) Frame = +2 Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241 MV++ + A LI +HFGDLV KVC CL+ KG LTL + + TEL SQ+KN LLVLIQ Sbjct: 1 MVTQYGIKYAVNLITAHFGDLVAKVCECLLRKGPLTLQAIVRSTELTSSQVKNSLLVLIQ 60 Query: 242 HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418 HNCVQ F + G K TQY D ++ R RFPKFL+ V Sbjct: 61 HNCVQAFILDQTGEHGDGAKQSTQYIALFDNIIQRWRFPKFLTMVSKKLDKQCAELLEGL 120 Query: 419 XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI--PPRS 592 HGRLS Q+ +RAK+ ++G ++ ++E+F KL++AHF+ERCP +EPV+ P + Sbjct: 121 LQHGRLSLKQMFDRAKS----GQNGGDDV-VQEAFVKLLNAHFIERCPASEPVLTNPTKE 175 Query: 593 SVDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL---------PKRNDH 745 +K+A + K+ ET EQR+ AA + RF F +++ Sbjct: 176 EEAARKRAAKSG----KILEVQETLEQRVVEAAMPTEALRFLFATETEPTADGGKDKSNS 231 Query: 746 HTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAG 925 + G+KRK+ LE ++ G +D+ LWR N+ EF+ R KAC+ R+R D A Sbjct: 232 SSVTPGEKRKHDALESEAECG-ATDEQVVLWRANFDEFIWCLRHKACIENVRARFDDGAV 290 Query: 926 TVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQV 1105 V M ATRS K + S PLS I V S+EG +T DR+R SL+Q+ P Sbjct: 291 IVFGAMLEATRSAEKKVKTENSVPLSLSSIYEEVIKSEEGRNITFDRVRASLVQLSCPP- 349 Query: 1106 GFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGP-MEQSKI 1282 F+ + +Y ++ ++II++ Q EVE+IV R+G ++ R+F +LS +G +E K+ Sbjct: 350 -FVKAANE---SYSVDFKKIIELAQNEEVESIVLKRYGRDAYRMFRLLSNSGHLLETDKV 405 Query: 1283 AGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMY 1462 A ++ +++ +LY+L KD YLQL+++ P F LW+VN++ LK ++D+M+ Sbjct: 406 ADATFVEKKETPIILYKLWKDDYLQLEKLQIGVKQIP---FQLWKVNKNTLKVHVLDEMF 462 Query: 1463 HAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSN-RQREQAERIRKIAT 1639 HAA NL QR+A LSN Q ++ R+RK Sbjct: 463 HAAFNLSQRVAFELEQEK-----------------------ELSNVLQDKRVNRLRK-RL 498 Query: 1640 ILETSLLKLDDSILLFDCF 1696 +LE+S +KLDD+I+LF F Sbjct: 499 LLESSQMKLDDAIMLFHDF 517 >GAV79297.1 RNA_pol_Rpc82 domain-containing protein/HTH_9 domain-containing protein [Cephalotus follicularis] Length = 530 Score = 306 bits (783), Expect = 9e-93 Identities = 205/558 (36%), Positives = 292/558 (52%), Gaps = 13/558 (2%) Frame = +2 Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241 MV+++ + A +I +HFG+LV KVC CL+ +G LTL + ++TEL SQ+KN LLVLIQ Sbjct: 1 MVTQHGIKYAVHIITAHFGNLVAKVCECLIRRGPLTLLNITRYTELTSSQVKNSLLVLIQ 60 Query: 242 HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418 HNCVQ F + G G K TQY + +D +LHR+RF KFL V Sbjct: 61 HNCVQAFILEQLGGFGEGSKFNTQYIVLVDNILHRVRFSKFLMIVSAELDNQCVELFEGL 120 Query: 419 XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI--PPRS 592 HGRL+ +Q+ +RAKA A + S KLV AH+VERCP EP++ P Sbjct: 121 LQHGRLTVNQMLDRAKANERNGNSVVSNA-VRGSLLKLVTAHYVERCPAPEPLLALPIEE 179 Query: 593 SVDPKKKAPRGATRRIKLDVNFETEEQRIAAAAS---------LPDVERFNFYLPKRNDH 745 PKK RGA + K+ ET EQR+ +AA +P+ E N+ Sbjct: 180 EAPPKK---RGA-KSDKIIEKSETIEQRVLSAAVPWEGLRFAVIPNTESDAGAEKDENNS 235 Query: 746 HTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAG 925 T G+KRK+ +E + G + I LWR N EF++ R KAC+ R+ LD A Sbjct: 236 STITVGEKRKHDAVEPNKENGAMDESI-VLWRANVEEFMHHLRHKACIEIVRAHLDDGAV 294 Query: 926 TVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQV 1105 TVL M ATR+ K + S PLS I V S+ G +T D +R SL Q+ S Sbjct: 295 TVLSAMVEATRAAEKKVKTENSVPLSVNSIYEEVIKSEAGQKLTFDHVRASLGQLGSQ-- 352 Query: 1106 GFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSM-NGPMEQSKI 1282 F D + Y IN + I+++ + EVE+IVS R G + RIF +LSM N +E KI Sbjct: 353 -FFVSAVDEA--YSINFKSIVELGRNEEVESIVSKRHGKKEYRIFRLLSMSNRFLETDKI 409 Query: 1283 AGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMY 1462 + L + + +L +LY+L KD YL ++++ T F LW+V + L ++D+M+ Sbjct: 410 SNDTLTEKKDTLNILYKLWKDDYLHMEKVVVTGSRQ--SQFMLWKVIKHTLWEHVLDEMF 467 Query: 1463 HAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIATI 1642 HAALNL QRLA P + + +++ RI+++ ++ Sbjct: 468 HAALNLSQRLAYELEKETELLNL---------------PSDKRTGQLKDKFNRIKRVRSL 512 Query: 1643 LETSLLKLDDSILLFDCF 1696 LE+S +KLDD+ILLF F Sbjct: 513 LESSQMKLDDAILLFHDF 530 >XP_006421933.1 hypothetical protein CICLE_v10004721mg [Citrus clementina] XP_006490399.1 PREDICTED: uncharacterized protein LOC102613614 isoform X1 [Citrus sinensis] ESR35173.1 hypothetical protein CICLE_v10004721mg [Citrus clementina] KDO52033.1 hypothetical protein CISIN_1g009725mg [Citrus sinensis] Length = 527 Score = 305 bits (782), Expect = 1e-92 Identities = 201/560 (35%), Positives = 299/560 (53%), Gaps = 15/560 (2%) Frame = +2 Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241 M++ + A +I +HFGDLV KVC CL+ KG LT + ++TEL+ Q+KN LLVLIQ Sbjct: 1 MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60 Query: 242 HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418 NCVQ F DG A G KA TQY + D +LHR+RF KFL+ + Sbjct: 61 QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120 Query: 419 XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSV 598 HGRL+ Q+ +RAK+ S + + + L E+ KLV AH+VERCP +EP++ P S Sbjct: 121 LEHGRLTLKQMFDRAKS-SEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEE 179 Query: 599 D-PKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL-------PKRNDHHTG 754 + P +K + ++I ET EQ++ AA + RF+ K + + Sbjct: 180 EGPARKKGSKSAKKIG---EPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNV 236 Query: 755 AFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVL 934 G+KRK+ LE D G+ +D+ ++R N+ F+ R R K C+ R+ LD A VL Sbjct: 237 TPGEKRKHDVLELD-ECGV-ADEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVL 294 Query: 935 DRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGFL 1114 M AT S K S PLS I V S+ G MT+D +R SL+Q+ G L Sbjct: 295 SAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQL-----GEL 349 Query: 1115 SRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGP-MEQSKIAGK 1291 S S +Y I+ +II++ Q EVE++VS R+G ++ RIF +LS +G +E KI+ Sbjct: 350 SFVDASSDSYSIDFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISDT 409 Query: 1292 ALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMYHAA 1471 ++ + + +LY+L KDGYL ++++ T A F LW+VN L ++D+M+HAA Sbjct: 410 TFVEKKDAPKILYKLWKDGYLLMEKLVVTG--ARQSQFLLWKVNRQILWKHVLDEMFHAA 467 Query: 1472 LNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQR-----EQAERIRKIA 1636 LNL R++ D ++ ++ L +R ++ RIRK+ Sbjct: 468 LNLSLRVSY--------------------ELDREKELLNLPADKRTGPLQDRYNRIRKVR 507 Query: 1637 TILETSLLKLDDSILLFDCF 1696 +LE+S +KLDD+ILLF F Sbjct: 508 ILLESSQMKLDDAILLFHDF 527