BLASTX nr result
ID: Ephedra29_contig00016930
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00016930
(1963 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010251272.1 PREDICTED: DNA-directed RNA polymerase III subuni... 353 e-111
XP_001775586.1 predicted protein [Physcomitrella patens] EDQ5953... 350 e-110
XP_010662742.1 PREDICTED: DNA-directed RNA polymerase III subuni... 342 e-107
OAE35426.1 hypothetical protein AXG93_2587s1410 [Marchantia poly... 330 e-102
XP_006859054.1 PREDICTED: DNA-directed RNA polymerase III subuni... 330 e-102
XP_010924543.1 PREDICTED: DNA-directed RNA polymerase III subuni... 325 e-100
XP_018830792.1 PREDICTED: DNA-directed RNA polymerase III subuni... 325 e-100
XP_008793119.1 PREDICTED: DNA-directed RNA polymerase III subuni... 322 3e-99
EOY23205.1 RNA polymerase III subunit RPC82 family protein, puta... 321 9e-99
GAQ82610.1 RNA polymerase III subunit RPC82 family protein [Kleb... 321 2e-98
XP_007038704.2 PREDICTED: DNA-directed RNA polymerase III subuni... 319 5e-98
XP_018830793.1 PREDICTED: DNA-directed RNA polymerase III subuni... 318 4e-97
OMO97858.1 RNA polymerase III Rpc82, C -terminal [Corchorus olit... 310 2e-94
XP_012484103.1 PREDICTED: DNA-directed RNA polymerase III subuni... 309 3e-94
XP_010035145.1 PREDICTED: DNA-directed RNA polymerase III subuni... 308 7e-94
KCW46437.1 hypothetical protein EUGRSUZ_K00269 [Eucalyptus grand... 308 2e-93
XP_016668418.1 PREDICTED: DNA-directed RNA polymerase III subuni... 306 3e-93
XP_017611851.1 PREDICTED: DNA-directed RNA polymerase III subuni... 306 4e-93
GAV79297.1 RNA_pol_Rpc82 domain-containing protein/HTH_9 domain-... 306 9e-93
XP_006421933.1 hypothetical protein CICLE_v10004721mg [Citrus cl... 305 1e-92
>XP_010251272.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Nelumbo
nucifera]
Length = 531
Score = 353 bits (907), Expect = e-111
Identities = 221/563 (39%), Positives = 313/563 (55%), Gaps = 18/563 (3%)
Frame = +2
Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
M ++ + +LA LI SHFGDLV KVC CL+ KG LTL ++ +FTEL +Q+KNCLLVLIQ
Sbjct: 1 MATQYSIKLAISLISSHFGDLVAKVCECLLRKGSLTLADITRFTELPQAQVKNCLLVLIQ 60
Query: 242 HNCVQGFKISSDDG-SATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
HNCVQ F I + G A K TQY D +LHRMRFPKFL+ V
Sbjct: 61 HNCVQAFSIQIEGGVGAAPKVITQYTAIFDNILHRMRFPKFLTIVSEELDKECEEILEGL 120
Query: 419 XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI-PPRSS 595
HGRL+ +Q+ RA + E ++A + ESF ++V +H+VERCP +EP + PP
Sbjct: 121 FQHGRLTLEQIILRAVSNQNEGNSTVQDA-VRESFVRIVSSHYVERCPASEPFLAPPDEE 179
Query: 596 VDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLPKRNDHHTG------- 754
+P KK + A +L ET E+R +AA+ + ERF D +G
Sbjct: 180 ENPTKKRAKSA----RLAEEIETLEKRAISAAAPLESERFAVITDTGTDVKSGDRSGSRF 235
Query: 755 ---AFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAG 925
A G+KRK+ LE D T + E LWR N+ F+ R R KACVA R+R+D A
Sbjct: 236 LDTAIGEKRKHEALEMDRETMATICEKEVLWRANFEAFIRRLRHKACVANVRARMDDGAC 295
Query: 926 TVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQV 1105
TVL+ M ATR+ + K + S PLS + I V S+ G MTV+R+R +L Q+
Sbjct: 296 TVLNAMLEATRNAESRIKTENSVPLSMDAILAEVMKSEGGRSMTVERVRAAL-----GQL 350
Query: 1106 GFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGPM-EQSKI 1282
G S ++ +++R II++ Q E+E+IV R+G ++ RIF +LS G + E KI
Sbjct: 351 GCRSSPRGAEDSHSVDLRNIIEIAQNDEMESIVLKRYGRDAYRIFRLLSKTGRLVETDKI 410
Query: 1283 AGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMY 1462
+ +D +++ +LY L KD YL ++++ T+ + F LW+VN S+L QI+D+M
Sbjct: 411 SDITFVDKKEAPKILYNLWKDNYLHMEKL--TSQGSKQSDFLLWKVNRSSLWKQILDEMC 468
Query: 1463 HAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQR-----EQAERIR 1627
HAALNL QRLA + + I+ L +R ++ ERIR
Sbjct: 469 HAALNLSQRLAY--------------------EFEQEHEILQLPREKRVGAQGKRFERIR 508
Query: 1628 KIATILETSLLKLDDSILLFDCF 1696
K+ ILE+SL+KLDD+I+LF F
Sbjct: 509 KVKVILESSLMKLDDAIMLFHDF 531
>XP_001775586.1 predicted protein [Physcomitrella patens] EDQ59533.1 predicted
protein, partial [Physcomitrella patens]
Length = 520
Score = 350 bits (899), Expect = e-110
Identities = 208/536 (38%), Positives = 304/536 (56%), Gaps = 14/536 (2%)
Frame = +2
Query: 131 KVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQHNCVQGFKISSDD-GSATGKAPT 307
KV CLVY+G L L ++A+F+ELNPS LK+ LLVL+QH+CVQ +K+ + GSA + T
Sbjct: 3 KVVKCLVYRGPLALADIARFSELNPSTLKSSLLVLVQHSCVQAYKVEHEGVGSAPPRVST 62
Query: 308 QYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXXXHGRLSFDQLKERAKAQSAERK 487
Y D +LHRMRFPKFL VR HGRL+ +Q+ +R A++ ++
Sbjct: 63 SYVPLCDNILHRMRFPKFLLAVREDLGEEVGSLVEGLLEHGRLTLEQITQRTAAKAGKKV 122
Query: 488 DGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPR-SSVDPKKKAPRGATRR----IKLDV 652
G++E+F KLV A F+ERCP AEP + P+ S+V+P KK PRGA + +
Sbjct: 123 ----VKGVKETFAKLVAARFIERCPAAEPSLQPKDSNVEPPKKVPRGAAKARGPILSAQD 178
Query: 653 NFETEEQRIAAAASLPDVERFNFYLPKRNDHHTGAFGKKRKYVTLEEDSRTGMPS----- 817
QRI AA+ + +RF + G V E + +P
Sbjct: 179 TVSEVVQRILKAAAPDETDRFRLPISMA--------GMSAPIVDNETTDPSSLPQKVNDI 230
Query: 818 --DDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDRMFCATRSIATTGKQDTS 991
D+ E LWRVN+ +F+ + R + CV R+RLD A +L M AT + T+ +Q S
Sbjct: 231 LIDEKEVLWRVNFEQFLRKLRHQTCVDMVRTRLDAGAAIILSAMLQATGNQETSARQHHS 290
Query: 992 APLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGFLSRTGDHSGNYIINIRRIIQ 1171
PLS + IT AVRS+ +G MT++RIR + Q+ S VGFL++ G+ +Y IN+ II+
Sbjct: 291 VPLSMDAITQAVRSTPDGQHMTLERIRGLVAQLASDGVGFLAKAGEGGNSYAINMHNIIE 350
Query: 1172 VTQTSEVEAIVSNRFGAESRRIFSMLSMNGPMEQSKIAGKALLDARQSLGVLYRLLKDGY 1351
Q +EVE IV RFG E RI+ +L++ G +EQ +I G+ + + +LYRLLK+ Y
Sbjct: 351 ARQRNEVEGIVLQRFGRECCRIYRLLAIKGQLEQKQI-GERAMAPKNVKELLYRLLKEQY 409
Query: 1352 LQL-QEIARTNDHAPAKTFYLWRVNESALKAQIVDDMYHAALNLVQRLAXXXXXXXXXXX 1528
+Q+ QEIA+T++H +K+ YLW+VN A+ +++DD+YHAA NL R A
Sbjct: 410 VQVQQEIAKTSEHIASKSIYLWKVNYRAVLYRVLDDLYHAATNLCLRHAHEIQKEQEVGL 469
Query: 1529 XXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIATILETSLLKLDDSILLFDCF 1696
++ P+ + Q++Q +RI +I IL+ SLLKLDD+ILLF F
Sbjct: 470 FMITI-----NTYTHPPLSQAAPAQQDQVKRISRITKILDASLLKLDDAILLFHDF 520
>XP_010662742.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1
[Vitis vinifera] CBI22720.3 unnamed protein product,
partial [Vitis vinifera]
Length = 524
Score = 342 bits (877), Expect = e-107
Identities = 222/560 (39%), Positives = 318/560 (56%), Gaps = 15/560 (2%)
Frame = +2
Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
M ++ QLA LI SHFG+LV KVC+CL+ KG LTL + +FTEL P Q+K+C+LVLIQ
Sbjct: 1 MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60
Query: 242 HNCVQGFKISSDDGSATGKAP---TQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXX 412
HNCVQ F I + G G+AP TQY +LHRMRF KFL+ V
Sbjct: 61 HNCVQAFAIQQEVG--FGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILE 118
Query: 413 XXXXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI-PPR 589
HGRL+ +Q+ +RAK+ +E + ++A L ESF KLV AHFVERCP +EP + PP
Sbjct: 119 GLLQHGRLTLEQILDRAKSNQSEGEPVVQDA-LRESFLKLVRAHFVERCPASEPFLAPPS 177
Query: 590 SSVDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL---PKRNDHHTGAF 760
P +K RGA + KL +T EQR AAA+ D +RF+ + +D
Sbjct: 178 EEETPARK--RGA-KSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGTDVDDSPNVTA 234
Query: 761 GKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDR 940
G+KRK LE D TG S + + LWR N+ EFV R KAC+A ++RLD A VL
Sbjct: 235 GEKRKQDALELDKETG-ASCEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSA 293
Query: 941 MFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSPQVGFLS 1117
M ATRS K + S PLS + I V S+ G MT++R+R SL+Q+ C+P V +
Sbjct: 294 MLEATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRGAA 353
Query: 1118 RTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMN-GPMEQSKIAGKA 1294
+Y ++++ II++ Q EVE+I R+G ++ RIF +LS + +E KI+
Sbjct: 354 E------SYSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISDTT 407
Query: 1295 LLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKT-FYLWRVNESALKAQIVDDMYHAA 1471
++ + + +LY+L KD YLQ++++ N H ++ F LW+V + L ++++MYH+A
Sbjct: 408 FVEKKDTAKILYQLWKDEYLQMEKL---NLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSA 464
Query: 1472 LNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQA-----ERIRKIA 1636
LNL R+A + +Q II L +R A ER+RK+
Sbjct: 465 LNLSLRVAY--------------------ELEQEQEIIQLPREKRVGALGNRFERLRKVR 504
Query: 1637 TILETSLLKLDDSILLFDCF 1696
+LE+SL+KLDD+I+LF+ F
Sbjct: 505 ILLESSLMKLDDAIMLFNDF 524
>OAE35426.1 hypothetical protein AXG93_2587s1410 [Marchantia polymorpha subsp.
polymorpha]
Length = 508
Score = 330 bits (845), Expect = e-102
Identities = 200/516 (38%), Positives = 290/516 (56%), Gaps = 19/516 (3%)
Frame = +2
Query: 197 LNPSQLKNCLLVLIQHNCVQGFKISSDD-GSATGKAPTQYAIFLDTVLHRMRFPKFLSTV 373
+N +QL+NCLLVL+QHNCVQGFKI + G K T Y D +LHRMRFPKFLS V
Sbjct: 1 MNITQLRNCLLVLVQHNCVQGFKIFQEAVGPNPPKVLTSYLGLTDNILHRMRFPKFLSIV 60
Query: 374 RXXXXXXXXXXXXXXXXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVE 553
R HGRL+ +Q+ +RA A+ A + + E L+++F LV +H++E
Sbjct: 61 RDELGEEAEALLEGLLEHGRLTLEQVVQRAAAR-AGKAESEVELPLKQTFAALVRSHYIE 119
Query: 554 RCPVAEPVIPPRSSVDPKKKAPRGATRR-----IKLDVNFETEEQRIAAAASLPDVERFN 718
RCP +EP + P++ ++P KK PRG + + N E++ RI + A+ D ERF
Sbjct: 120 RCPASEPTVAPKA-IEPPKKVPRGPNSKGRAAKVAAIKNLESDYDRIVSVAAALDTERFR 178
Query: 719 FYLPKRNDHHTGAF----------GKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNR 868
TG G+KRK L D++T D+ E LWR NY E + +
Sbjct: 179 MPSSLEEVGETGGGDVSMTDPVVPGQKRKRDALAMDAKTMAIVDEKEVLWRANYEELIRK 238
Query: 869 FRQKACVAQARSRLDVSAGTVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGL 1048
R +ACVAQ ++R+D +AG+VL M TRS TT K SAPLS I AV + EG
Sbjct: 239 LRHQACVAQVKTRIDAAAGSVLAAMLEMTRSSETTSKPQVSAPLSMTVIMQAVTMTPEGR 298
Query: 1049 GMTVDRIRTSLLQMCSPQVGFLSRTGDHSGNYIIN-IRRIIQV--TQTSEVEAIVSNRFG 1219
MT++RIR +L QM VGF++RTG+ +YII+ R+ ++ + S ++A+
Sbjct: 299 TMTMERIRGALHQMAQETVGFITRTGEGGSSYIISGGHRVTEIWTGKLSNIQALDDEGAD 358
Query: 1220 AESRRIFSMLSMNGPMEQSKIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAK 1399
+++ M IAG A++ + + +LYRLLK+ Y+ +QE+A+T +H+ K
Sbjct: 359 GTKTGQLNVVLMT-------IAGMAMVQLKDARELLYRLLKEQYVVVQEVAKTAEHSAQK 411
Query: 1400 TFYLWRVNESALKAQIVDDMYHAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQP 1579
+ YLW +N +K ++DDMYHAA NL QRL+ A + G +
Sbjct: 412 SIYLWNINWDVVKLLVLDDMYHAAGNLQQRLS--HELEQEQEVLELLKQIQAAKAAGAET 469
Query: 1580 IITLSNRQREQAERIRKIATILETSLLKLDDSILLF 1687
+TL+ RQ EQ +RIR++A+ILE SLLKLD++ILLF
Sbjct: 470 HVTLTQRQHEQVKRIRRVASILEASLLKLDNAILLF 505
>XP_006859054.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Amborella
trichopoda] ERN20521.1 hypothetical protein
AMTR_s00068p00192690 [Amborella trichopoda]
Length = 515
Score = 330 bits (845), Expect = e-102
Identities = 215/561 (38%), Positives = 304/561 (54%), Gaps = 16/561 (2%)
Frame = +2
Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
MV+ A+QLA +LI S FGDLV KVC CL+ KG L L LA TEL QLK CLLVLIQ
Sbjct: 1 MVANQARQLAVDLITSDFGDLVAKVCKCLLKKGALPLARLAMETELPREQLKKCLLVLIQ 60
Query: 242 HNCVQGFKISSDDGSATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXX 421
HNCVQ F+ + G + T+Y LD ++HR+RFPKFL +R
Sbjct: 61 HNCVQAFQTKKEVGGRV-MSTTEYTALLDDIIHRLRFPKFLILIRDQFDEQCECLLGILL 119
Query: 422 XHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEP--VIPPRSS 595
HGR +F+QL +R E G + F KLV A +VERCP +EP V+
Sbjct: 120 SHGRSTFEQLMQRLFENQPE-VSGDITDQMRTRFAKLVQARYVERCPASEPQLVLDSEEG 178
Query: 596 VDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLPKRNDHHTGA------ 757
KKK T+E+R AA+ + ERF+F ND T +
Sbjct: 179 TITKKKLK-----------EIVTDEERAVMAAAPLEAERFSFPTYSDNDASTESEIMADQ 227
Query: 758 ---FGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGT 928
G+KRK +E D + + + + + LWR N+ EFV R KAC+A R RLD+ A
Sbjct: 228 SILVGEKRKRGVMEMDDDSIVLACEKDVLWRANFEEFVCSLRHKACIANVRPRLDIGAAV 287
Query: 929 VLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVG 1108
VL+ + TR+ K + SAP S I A+ S G ++ +R +L Q+ +
Sbjct: 288 VLEAILKETRAKEKQNKAEYSAPFSMNSIVQALLGSPHG---HLEHVRAALNQLGA---- 340
Query: 1109 FLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLS-MNGPMEQSKIA 1285
S TG G+Y I++++II+ Q SE+E+IV R+G+E RIF +L+ NG +EQ +I
Sbjct: 341 --SCTGATEGSYRISLKKIIEAAQNSEMESIVLKRYGSEGCRIFRLLADKNGMIEQKQIP 398
Query: 1286 GKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMYH 1465
AL++ +++ +LY+L+KD YLQ++E+A A K F LWRVN S+L+ +I++DMYH
Sbjct: 399 NLALIETKKAFELLYKLMKDDYLQMEEVA----SAQGKLF-LWRVNRSSLQEKILNDMYH 453
Query: 1466 AALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNR----QREQAERIRKI 1633
AA NL QRLA ++++ + + NR Q ++ +RIRK+
Sbjct: 454 AASNLCQRLAH-------------------ETTEEHELQLLKKNRITELQEKKVDRIRKV 494
Query: 1634 ATILETSLLKLDDSILLFDCF 1696
ILE S+L+LDDSI+LF F
Sbjct: 495 KPILEASILRLDDSIMLFHNF 515
>XP_010924543.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc3 [Elaeis
guineensis]
Length = 518
Score = 325 bits (832), Expect = e-100
Identities = 208/556 (37%), Positives = 291/556 (52%), Gaps = 11/556 (1%)
Frame = +2
Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
M + +LA LI +HFGDLV KVC+CL+++G LTL E+ +FTEL+ SQ+KNCLLVLIQ
Sbjct: 1 MAGQCGLKLAVSLITTHFGDLVAKVCSCLLHRGTLTLQEIIRFTELSSSQVKNCLLVLIQ 60
Query: 242 HNCVQGFKISSDDG-SATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
HNCVQ F G KA TQY D +LHRMRF KFL+ VR
Sbjct: 61 HNCVQAFSTPRPAGPGGVTKAVTQYMALFDNILHRMRFAKFLAVVRDDLGPRCEILLAGL 120
Query: 419 XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSV 598
+GRL+F QL ERA + E E GL +F +LV + +VERCP EP I P
Sbjct: 121 LQNGRLTFGQLVERASSNKPEVSASMRE-GLRANFNRLVSSRYVERCPRPEPFIDP---- 175
Query: 599 DPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLP--------KRNDHHTG 754
P+++ R K + EQ+ AA+L D ERF+ K DH
Sbjct: 176 SPQEETRSTRKRSAKTSEEMLSVEQQAMVAAALSDAERFSEITDTSTENIEVKATDHDPD 235
Query: 755 -AFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTV 931
+ G KRKY LE D + E LWR N+ +F+ ++KACVA RS+L + AG V
Sbjct: 236 VSVGDKRKYGVLEMDQEVQAVIAENEVLWRANFEKFLLCLKKKACVAHVRSKLGLDAGVV 295
Query: 932 LDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGF 1111
L+ M S K +T + + I VR+ G+ MT++ IR L Q+
Sbjct: 296 LEAMI--ESSGQQKAKDETPVRATMDSILEGVRAKPGGISMTLEHIRVIL-----DQLRC 348
Query: 1112 LSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNG-PMEQSKIAG 1288
S +Y I+++ II Q EVEA+V RFG E+ RIF +L NG P E +IA
Sbjct: 349 QSCNWGGGASYSIDLKSIIDTCQNDEVEALVLTRFGKETYRIFRLLIKNGHPFETDRIAD 408
Query: 1289 KALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMYHA 1468
A ++ +++ G+LY+L KD YL ++++ + A K +LW+V + AL +++D+YHA
Sbjct: 409 IAFVEKKEAQGILYKLWKDEYLDMEKV--VSHAAGQKELFLWKVKKDALWEHVLNDLYHA 466
Query: 1469 ALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIATILE 1648
ALNL Q++A +++RE+ E++R ILE
Sbjct: 467 ALNLSQKIAHLVEQEHEV------------------------SQRREKPEQLRNSRMILE 502
Query: 1649 TSLLKLDDSILLFDCF 1696
SLLKLDD+++LF F
Sbjct: 503 LSLLKLDDALMLFHDF 518
>XP_018830792.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc-3 isoform X1
[Juglans regia]
Length = 553
Score = 325 bits (833), Expect = e-100
Identities = 211/571 (36%), Positives = 300/571 (52%), Gaps = 18/571 (3%)
Frame = +2
Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
MV+ + LI +HFG+LV KVC L+ +G LTL + ++TEL P Q+KN LL+LIQ
Sbjct: 1 MVTEYGIKFTVNLINNHFGNLVAKVCENLLRRGPLTLQLIVRYTELTPQQVKNSLLILIQ 60
Query: 242 HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
HNCVQ F D G G K+ TQY + +LHRMRF KFL +
Sbjct: 61 HNCVQAFSYEQDGGLEDGPKSNTQYMALFNNILHRMRFSKFLEIISREFDDKCKELLEGL 120
Query: 419 XXHGRLSFDQLKERAKAQSAERK----DGPEEAGLEESFRKLVDAHFVERCPVAEPVIPP 586
HGRL+ Q+ ERAK + K +G E ++ES KL+ A +VERCP +EPV+
Sbjct: 121 LQHGRLTLKQMVERAKDMAERAKSRKIEGICEDLVQESLVKLLTARYVERCPASEPVLAA 180
Query: 587 RSSVDP--KKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLPKRN------- 739
R + KK+ P+ A + +T EQR+ AAA+ +RF+ +
Sbjct: 181 RDKEETPAKKRGPKSA----RTAEESQTLEQRVLAAAAPMGAQRFSAITNNESSVSRETS 236
Query: 740 --DHHTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLD 913
D G KRKY LE +++ LWR N+ EF+ R KAC+ R RLD
Sbjct: 237 TDDSPGMRVGAKRKYDALELHIEPAAEEEEV-VLWRANFEEFIRCLRHKACIENVRERLD 295
Query: 914 VSAGTVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM- 1090
A TVL M ATRS K + S PLS I V S+EG GMT+DR+R SL+Q+
Sbjct: 296 DGAATVLRAMLEATRSFENKVKTEKSVPLSLNNIFEEVMKSEEGRGMTLDRVRASLVQLG 355
Query: 1091 CSPQVGFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGPM- 1267
CSP +R D S Y I++++II++ Q EVE+IV R+G ++ R+F +LS NG +
Sbjct: 356 CSPS----ARGTDES--YKIDLKKIIELAQNDEVESIVLKRYGRDAYRMFRLLSKNGCLV 409
Query: 1268 EQSKIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQI 1447
E KIA ++ + + +LY+L KD YL ++++ A F LW+VN+ L +
Sbjct: 410 ETDKIANTTFVEKKDAPKILYKLWKDEYLHMEKLVVAG--ARQSQFLLWKVNKPCLWKHV 467
Query: 1448 VDDMYHAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIR 1627
+D+M+HAALNL QR+A P+ Q E+ R++
Sbjct: 468 LDEMFHAALNLSQRVAYEREKEKEFL---------------NLPVDKQIMSQEERLNRLK 512
Query: 1628 KIATILETSLLKLDDSILLFDCF*DPSLIPL 1720
+ +LE+SLLKL D+ +LF F + SL+ L
Sbjct: 513 SVRIVLESSLLKLGDAFMLFHDFEESSLLKL 543
>XP_008793119.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Phoenix
dactylifera]
Length = 518
Score = 322 bits (826), Expect = 3e-99
Identities = 207/556 (37%), Positives = 290/556 (52%), Gaps = 11/556 (1%)
Frame = +2
Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
M ++ +LA LI +HFGDLV KVC+CL+++G L+L E+ +FTEL+ SQ+KNCLLVL+Q
Sbjct: 1 MAAQCGLKLAVSLITAHFGDLVAKVCSCLLHRGTLSLQEIIRFTELSSSQIKNCLLVLVQ 60
Query: 242 HNCVQGFKISSDDG-SATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
HNCVQ F G KA TQY D +LHRMRF KFL+ VR
Sbjct: 61 HNCVQAFSTPRPAGPGGVAKAVTQYMALFDNILHRMRFAKFLAVVRDDLGPQCEILLAGL 120
Query: 419 XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSV 598
+GRL+F QL ERA + E E GL +F +LV A +VERCP EP I P
Sbjct: 121 LQNGRLTFGQLVERATSSKPEVSASMRE-GLRANFNRLVSARYVERCPRPEPFIEP---- 175
Query: 599 DPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLP--------KRNDHHTG 754
P+++ R K + EQR AA+L D ERF+ K DH +
Sbjct: 176 SPQEETRSTRRRSAKTSEEILSIEQRAMVAAALSDAERFSEITDTATETIEVKATDHSSD 235
Query: 755 -AFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTV 931
+ G KRKY LE D E LW+ N+ +F+ ++KACVA RSR + AG V
Sbjct: 236 VSVGDKRKYGALEMDQEVQAAITQNEVLWQANFEKFLLCLKKKACVAHVRSRFGLDAGAV 295
Query: 932 LDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGF 1111
L+ M S K +T + + I VR+ G+ MT++ IR L Q+
Sbjct: 296 LEAMI--ESSGQQKAKDETPVRATMDSILEGVRAKPGGISMTLEHIRVIL-----DQLHC 348
Query: 1112 LSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNG-PMEQSKIAG 1288
S +Y I+++ II Q EVEA+V RFG E+ RIF +L NG P E +IA
Sbjct: 349 QSCNWGAGASYSIDLKSIIDTCQNDEVEALVLTRFGKEAYRIFRLLIKNGHPFETDRIAD 408
Query: 1289 KALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMYHA 1468
A ++ + + G+LY+L KD YL ++++ + A K +LW+V + AL +++D+YHA
Sbjct: 409 IAFVEKKDAQGILYKLWKDEYLDMEKV--VSYAAGQKELFLWKVKKDALWEHVLNDLYHA 466
Query: 1469 ALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIATILE 1648
ALNL Q++A +++RE+ E++R ILE
Sbjct: 467 ALNLSQKIAHIVEQEHEV------------------------SQRREKPEQLRNGRMILE 502
Query: 1649 TSLLKLDDSILLFDCF 1696
SLLKLDD+++LF F
Sbjct: 503 LSLLKLDDALMLFRDF 518
>EOY23205.1 RNA polymerase III subunit RPC82 family protein, putative isoform 1
[Theobroma cacao]
Length = 523
Score = 321 bits (823), Expect = 9e-99
Identities = 207/559 (37%), Positives = 302/559 (54%), Gaps = 14/559 (2%)
Frame = +2
Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
MV+++ + A LI +HFGDLV KVC CL+ KG LTL + +FTEL SQ+KN LLVLIQ
Sbjct: 1 MVTQHGIKYAVLLITTHFGDLVAKVCECLLRKGPLTLQAIVRFTELTSSQVKNSLLVLIQ 60
Query: 242 HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
HNCVQ F + G K +QY + ++HR RFPKFL+ V
Sbjct: 61 HNCVQAFILEQPGSHGDGAKLNSQYIALFNNIIHRWRFPKFLTIVSQKLDKQCVELIEAL 120
Query: 419 XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI--PPRS 592
HGRL+ Q+ +RAK+ E D +A + E+F KL++AHFVERCP AEPV+ P
Sbjct: 121 LLHGRLTLKQMSDRAKSAQNEGDDVILDA-VREAFIKLLNAHFVERCPAAEPVLTKPTEE 179
Query: 593 SVDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL---------PKRNDH 745
+K+ P+ A K+ ET EQR+ AA+ + RF N+
Sbjct: 180 ETSARKRVPKSA----KILEGKETLEQRVLEAATPSEALRFLLVTRTEPAADGGKDENNS 235
Query: 746 HTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAG 925
+ GKKRK LE ++ G +D+ LWR N+ EF+ R R KA + R+ LD A
Sbjct: 236 SSMTVGKKRKLDALESETE-GEATDEQVVLWRANFEEFIRRLRHKAFIENVRACLDDGAV 294
Query: 926 TVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSPQ 1102
V+ M ATR+ K + S PLS I V S+EG +T DR+R SL+Q+ C P
Sbjct: 295 IVISAMLEATRTAEKKVKTENSVPLSLNSIYEEVIKSEEGRNITFDRVRASLVQLSCPPF 354
Query: 1103 VGFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGP-MEQSK 1279
V ++ +Y I+ ++II++ Q EVE+IV R+G ++ R+F +LS +E K
Sbjct: 355 VKAVNE------SYSIDFKKIIELAQNDEVESIVLKRYGRDAYRMFRLLSSTARLLETDK 408
Query: 1280 IAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDM 1459
IA A ++ + + +LY+L KD YL ++++ T A F LW+VN++ L ++D+M
Sbjct: 409 IADTAFVEKKDTTKILYKLWKDDYLHMEKLQLTG--ARQSQFLLWKVNKNTLWEHVLDEM 466
Query: 1460 YHAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIAT 1639
+HAALNL R+A + +Q L+ Q ++ R+RK+
Sbjct: 467 FHAALNLSLRVA----------------------HELEQEKELLNLPQDKRVNRLRKVRL 504
Query: 1640 ILETSLLKLDDSILLFDCF 1696
+LE+S +KLDD+I+LF F
Sbjct: 505 LLESSQMKLDDAIMLFHDF 523
>GAQ82610.1 RNA polymerase III subunit RPC82 family protein [Klebsormidium
flaccidum]
Length = 559
Score = 321 bits (823), Expect = 2e-98
Identities = 198/562 (35%), Positives = 297/562 (52%), Gaps = 17/562 (3%)
Frame = +2
Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
M S++A++LACE++ FG+ VGKVC LV+KG +LP+L + TEL P QL+NC+LVL Q
Sbjct: 1 MPSKHAKKLACEIVVDQFGEQVGKVCQTLVFKGQHSLPDLGRVTELTPPQLRNCVLVLSQ 60
Query: 242 HNCVQGFKISSDDGSATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXX 421
HNCVQ +++ D + + Y + +L R+RFP+ L V+
Sbjct: 61 HNCVQAYRVEPDAENPRTRPQVLYVALVSRILQRLRFPRMLLHVKEELGPDAEAVLEGLI 120
Query: 422 XHGRLSFDQLKERAKAQSA-ERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSV 598
HGRLS QL ERA A++ E + + G++E+F++LV A +VE+ P AEPV+PP S
Sbjct: 121 EHGRLSVGQLVERASARTEDEAERSAQSEGVKEAFKQLVQARYVEKAPQAEPVLPPASEG 180
Query: 599 DPKKKAPRGATRR---IKLDVNFETEEQRIAAAASLPDVERFNF---YLPKRNDHHTGAF 760
D KK A R K V E+EE R +++ D +RF L N T A
Sbjct: 181 DTKKGTRINARARAAAAKASV-VESEEARAVRLSAVSDFDRFRLPSSVLGLENGAPTAAE 239
Query: 761 GK-------KRKYVTLEEDSRTG-MPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDV 916
K KR+ E+ ++ +D+ E +WRVNY EF RFR +A R+
Sbjct: 240 TKALSRTKRKREAELAEQAAQAAKQKADEEELVWRVNYDEFTRRFRHEAMSEFVEERMGP 299
Query: 917 SAGTVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCS 1096
+AG + M TR + + S P+S E I +RSS G + IRT+L Q+
Sbjct: 300 TAGAAVRTMLTETRGQEQSVAEKASGPVSVEAIHTILRSSPAGSALPKSSIRTALEQLAE 359
Query: 1097 PQVGFLSRTGD-HSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGPMEQ 1273
+++ + G Y +++ ++ + E+E++V NRFG + RIF +L M +EQ
Sbjct: 360 EGSAMVTKENELGGGTYAVDMAHVVAEMRERELESVVRNRFGQGACRIFRLLRMKRMLEQ 419
Query: 1274 SKIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVD 1453
+I A++ + + +LY LLK Y+ LQE+A+T DH ++TFYLWRVN + +D
Sbjct: 420 KQIGEMAMIPIKDTRQLLYTLLKGHYVSLQELAKTADHVASRTFYLWRVNIPQVSEHALD 479
Query: 1454 DMYHAALNLVQRLA-XXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRK 1630
+MYH A NL RL A G +TL++ QRE+ E+ R+
Sbjct: 480 EMYHGASNLRNRLQHELAQEKELLSICDDMAAGNAAGEHGSH--VTLTSAQRERLEQFRQ 537
Query: 1631 IATILETSLLKLDDSILLFDCF 1696
+A +LE+SLL L+ I+LF F
Sbjct: 538 VAAVLESSLLALEKMIMLFSDF 559
>XP_007038704.2 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Theobroma
cacao]
Length = 523
Score = 319 bits (818), Expect = 5e-98
Identities = 207/559 (37%), Positives = 300/559 (53%), Gaps = 14/559 (2%)
Frame = +2
Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
MV+++ + A LI +HFGDLV KVC CL+ KG LTL + +FTEL SQ+KN LLVLIQ
Sbjct: 1 MVTQHGIKYAVHLITTHFGDLVAKVCECLLRKGPLTLQAIVRFTELTSSQVKNSLLVLIQ 60
Query: 242 HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
HNCVQ F + G K TQY + ++HR RFPKFL+ V
Sbjct: 61 HNCVQAFILEQLGSHGDGAKLNTQYIALFNNIIHRWRFPKFLTIVSQKLDKQCVELFEAL 120
Query: 419 XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI--PPRS 592
HGRL+ Q+ +RAK+ E D +A + E+F KL++AHFVERCP AE V+ P
Sbjct: 121 LLHGRLTLKQMSDRAKSAQNEGDDVILDA-VREAFIKLLNAHFVERCPAAESVLTKPTEE 179
Query: 593 SVDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL---------PKRNDH 745
+K+ P+ A K+ ET EQR+ AA+ + RF N+
Sbjct: 180 ETSARKRVPKSA----KILEGKETLEQRVLEAATPSEALRFLLVTRTEPAADGGKDENNS 235
Query: 746 HTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAG 925
GKKRK LE ++ G +D+ LWR N+ EF+ R R KA + R+ LD A
Sbjct: 236 SNMTVGKKRKLDALESETE-GEATDEQVVLWRANFEEFIRRLRHKAFIENVRACLDDGAV 294
Query: 926 TVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSPQ 1102
V+ M ATR+ K + S PLS I V S+EG +T DR+R SL+Q+ C P
Sbjct: 295 IVISAMLEATRTAEKKVKTENSVPLSLNSIYEEVIKSEEGRNITFDRVRASLVQLSCPPF 354
Query: 1103 VGFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGP-MEQSK 1279
V ++ +Y I+ ++II++ Q EVE+IV R+G ++ R+F +LS +E K
Sbjct: 355 VKAVNE------SYSIDFKKIIELAQNDEVESIVLKRYGRDAYRMFRLLSSTARLLETDK 408
Query: 1280 IAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDM 1459
IA A ++ + + +LY+L KD YL ++++ T A F LW+VN++ L ++D+M
Sbjct: 409 IADTAFVEKKDTTKILYKLWKDDYLHMEKLQLTG--ARQSQFLLWKVNKNTLWEHVLDEM 466
Query: 1460 YHAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIAT 1639
+HAALNL R+A + +Q L+ Q ++ R+RK+
Sbjct: 467 FHAALNLSLRVA----------------------HELEQEKELLNLPQDKRVNRLRKVRL 504
Query: 1640 ILETSLLKLDDSILLFDCF 1696
+LE+S +KLDD+I+LF F
Sbjct: 505 LLESSQMKLDDAIMLFHDF 523
>XP_018830793.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc-3 isoform X2
[Juglans regia]
Length = 547
Score = 318 bits (814), Expect = 4e-97
Identities = 208/571 (36%), Positives = 296/571 (51%), Gaps = 18/571 (3%)
Frame = +2
Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
MV+ + LI +HFG+LV KVC L+ +G LTL + ++TEL P Q+KN LL+LIQ
Sbjct: 1 MVTEYGIKFTVNLINNHFGNLVAKVCENLLRRGPLTLQLIVRYTELTPQQVKNSLLILIQ 60
Query: 242 HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
HNCVQ F D G G K+ TQY + +LHRMRF KFL +
Sbjct: 61 HNCVQAFSYEQDGGLEDGPKSNTQYMALFNNILHRMRFSKFLEIISREFDDKCKELLEGL 120
Query: 419 XXHGRLSFDQLKERAKAQSAERK----DGPEEAGLEESFRKLVDAHFVERCPVAEPVIPP 586
HGRL+ Q+ ERAK + K +G E ++ES KL+ A +VERCP +EPV+
Sbjct: 121 LQHGRLTLKQMVERAKDMAERAKSRKIEGICEDLVQESLVKLLTARYVERCPASEPVLAA 180
Query: 587 RSSVDP--KKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLPKRN------- 739
R + KK+ P+ A + +T EQR+ AAA+ +RF+ +
Sbjct: 181 RDKEETPAKKRGPKSA----RTAEESQTLEQRVLAAAAPMGAQRFSAITNNESSVSRETS 236
Query: 740 --DHHTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLD 913
D G KRKY LE +++ LWR N+ EF+ R KAC+ R RLD
Sbjct: 237 TDDSPGMRVGAKRKYDALELHIEPAAEEEEV-VLWRANFEEFIRCLRHKACIENVRERLD 295
Query: 914 VSAGTVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM- 1090
A TVL M ATRS K + S PLS I V S+EG GMT+DR+R SL+Q+
Sbjct: 296 DGAATVLRAMLEATRSFENKVKTEKSVPLSLNNIFEEVMKSEEGRGMTLDRVRASLVQLG 355
Query: 1091 CSPQVGFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGPM- 1267
CSP S G ++++II++ Q EVE+IV R+G ++ R+F +LS NG +
Sbjct: 356 CSP-----SARG-------TDLKKIIELAQNDEVESIVLKRYGRDAYRMFRLLSKNGCLV 403
Query: 1268 EQSKIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQI 1447
E KIA ++ + + +LY+L KD YL ++++ A F LW+VN+ L +
Sbjct: 404 ETDKIANTTFVEKKDAPKILYKLWKDEYLHMEKLVVAG--ARQSQFLLWKVNKPCLWKHV 461
Query: 1448 VDDMYHAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIR 1627
+D+M+HAALNL QR+A P+ Q E+ R++
Sbjct: 462 LDEMFHAALNLSQRVAYEREKEKEFL---------------NLPVDKQIMSQEERLNRLK 506
Query: 1628 KIATILETSLLKLDDSILLFDCF*DPSLIPL 1720
+ +LE+SLLKL D+ +LF F + SL+ L
Sbjct: 507 SVRIVLESSLLKLGDAFMLFHDFEESSLLKL 537
>OMO97858.1 RNA polymerase III Rpc82, C -terminal [Corchorus olitorius]
Length = 523
Score = 310 bits (794), Expect = 2e-94
Identities = 202/560 (36%), Positives = 306/560 (54%), Gaps = 15/560 (2%)
Frame = +2
Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
MV++ + A LI +HFGDLV KVC CL+ +G LTL L KFTEL+ SQ+KN LLVLIQ
Sbjct: 1 MVTQYGIKYAVHLITTHFGDLVAKVCECLLRRGPLTLQALVKFTELSSSQVKNSLLVLIQ 60
Query: 242 HNCVQGFKISSDDGSATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXX 421
HNCVQ F D K TQY + D ++HR RFPKFL+ V
Sbjct: 61 HNCVQAFLPEPGDHGDADKLNTQYIVLFDNIIHRWRFPKFLNIVSEKLDEQCVKLLEGLL 120
Query: 422 XHGRLSFDQLKERAKAQSAERKDGPEEA--GLEESFRKLVDAHFVERCPVAEPVI--PPR 589
HGRL+ Q+ +R +A+ ++K+G + + KL++A FVERCP AEPV+ P
Sbjct: 121 QHGRLTLKQMSDRDRAR-LDQKEGEDVILDATRANLIKLLNARFVERCPAAEPVLAKPTE 179
Query: 590 SSVDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLPKR-------NDHH 748
+K+ P+ A K+ ET E R+ AA+ + RF ++ +
Sbjct: 180 EESSARKRGPKSA----KILEENETLEHRVMDAAAPSEALRFLLVTQTESAADGGLDESN 235
Query: 749 TGAF--GKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSA 922
T + G KRK LE ++ +G +D+ LWR N+ EF+ R R +AC+ R+RLD A
Sbjct: 236 TSSLKAGVKRKSDALESETESG-AADEQVLLWRANFEEFMRRLRHEACIVNLRARLDDGA 294
Query: 923 GTVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSP 1099
VL M ATRS K + S PLS I V S EG +T DR+R SL+Q+ C P
Sbjct: 295 VIVLRAMLEATRSAEKKVKTEHSVPLSLNSIYEEVIKSVEGRNITFDRVRASLVQLSCPP 354
Query: 1100 QVGFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGP-MEQS 1276
V ++ +Y I+ ++II++ Q+ EVE++V R+G+++ ++F +LS G +E
Sbjct: 355 FVKAINE------SYSIDFKKIIELAQSDEVESVVLKRYGSDACKMFRLLSNTGRFVETD 408
Query: 1277 KIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDD 1456
KIA L++ +++ VLY+L KD YL ++++ T F LW+V ++ ++ ++D+
Sbjct: 409 KIADSTLIEKKETPMVLYKLWKDDYLHMEKLQLTGTR--QSHFLLWKVKKNTIREHVLDE 466
Query: 1457 MYHAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIA 1636
M+HAALNL RLA + ++ +++LS R+ +R+RK+
Sbjct: 467 MFHAALNLNLRLAY--------------------EVEQEKELLSLSQDNRD--KRLRKV- 503
Query: 1637 TILETSLLKLDDSILLFDCF 1696
+L S +KLDD+I++F F
Sbjct: 504 KLLSQSQMKLDDAIMIFHDF 523
>XP_012484103.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1
[Gossypium raimondii] KJB34119.1 hypothetical protein
B456_006G048800 [Gossypium raimondii]
Length = 517
Score = 309 bits (792), Expect = 3e-94
Identities = 203/559 (36%), Positives = 299/559 (53%), Gaps = 14/559 (2%)
Frame = +2
Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
MV++ + A LI +HFGDLV KVC CL+ +G LTL + + TEL SQ+KN LLVLIQ
Sbjct: 1 MVTQYGIKYAVNLITAHFGDLVAKVCECLLRRGPLTLQAIVRSTELTSSQVKNSLLVLIQ 60
Query: 242 HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
HNCVQ F + G K TQY D ++ R RFPKFL+ V
Sbjct: 61 HNCVQAFILDQTGEHGDGAKQSTQYIALFDNIIQRWRFPKFLTMVSKKLDKQCVELLEGL 120
Query: 419 XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI--PPRS 592
HGRL+ Q+ +RAK+ E D ++E+F KL++AHF+ERCP +EPV+ P +
Sbjct: 121 LQHGRLTLKQMFDRAKSGQNEGDD-----VVQEAFVKLLNAHFIERCPASEPVLTNPTKE 175
Query: 593 SVDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL---------PKRNDH 745
+K+A + K+ ET EQR+ AA + RF F +++
Sbjct: 176 EEAARKRAAKSG----KILEVQETLEQRVVEAAMPTEALRFLFATETEPTADGGKDKSNS 231
Query: 746 HTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAG 925
+ G+KRK+ +E ++ +G +D+ LWR N EF+ R KAC+ R+R D A
Sbjct: 232 SSVTPGEKRKHDAIESEAESG-DTDEQVVLWRANIDEFIRHLRHKACIENVRARFDDGAV 290
Query: 926 TVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQV 1105
V M ATRS K + S PLS I V S+EG +T DR+R SL+Q+ P
Sbjct: 291 IVFGAMLEATRSAEKKVKTENSVPLSLSSIYEEVIKSEEGRNITFDRVRASLVQLSCPP- 349
Query: 1106 GFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGP-MEQSKI 1282
F+ T + +Y ++ ++II++ Q EVE+IV R+G ++ R+F +LS +G +E K+
Sbjct: 350 -FVKATNE---SYSVDFKKIIELAQHEEVESIVLKRYGRDAYRMFRLLSNSGHLLETDKV 405
Query: 1283 AGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMY 1462
A ++ +++ +LY+L KD YLQL+++ P F LW+VN+S LK ++D+M+
Sbjct: 406 ADATFVEKKETPIILYKLWKDDYLQLEKLQIGVKQTP---FQLWKVNKSTLKVHVLDEMF 462
Query: 1463 HAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSN-RQREQAERIRKIAT 1639
HAA NL QR+A LSN Q ++ R+RK
Sbjct: 463 HAAFNLSQRVAFELEQEK-----------------------ELSNVLQDKRVNRLRK-RL 498
Query: 1640 ILETSLLKLDDSILLFDCF 1696
+LE+S +KLDD+I+LF F
Sbjct: 499 LLESSQMKLDDAIMLFHDF 517
>XP_010035145.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc3 [Eucalyptus
grandis]
Length = 522
Score = 308 bits (790), Expect = 7e-94
Identities = 201/548 (36%), Positives = 287/548 (52%), Gaps = 12/548 (2%)
Frame = +2
Query: 89 ACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQHNCVQGFKI 268
A +I SHFGDLV KVC CL+ +G LT + +FTE++ SQ+KNCLLVLIQ NCVQ F +
Sbjct: 12 AGHIISSHFGDLVAKVCECLLRRGPLTHQNIVRFTEMSASQVKNCLLVLIQQNCVQAFSV 71
Query: 269 SSDDG-SATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXXXHGRLSFD 445
G T + T+Y D ++HRMRFPKF++ V HGRL+ +
Sbjct: 72 EHPGGVGDTSRRSTEYLALFDNIIHRMRFPKFVAVVSQELDKECVELFQGLLQHGRLTLE 131
Query: 446 QLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSVDPKKKAPRG 625
++ +RAK + ++D + E+ KL +A FVE CP EP + P S P +K
Sbjct: 132 KMIDRAK---SGQEDSTAQDATREALSKLANARFVEHCPDPEPHLSPPSEEAPARK---- 184
Query: 626 ATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL--------PKRNDHHTGAFGKKRKYV 781
T+ K+ ET E+R+ AAA+ + +RF K D G G+KRK
Sbjct: 185 RTKSSKMVAEPETIEERVLAAATPMEAKRFLIIFDTTTEEDGQKTGDSFLGV-GEKRKSD 243
Query: 782 TLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDRMFCATRS 961
LE + G SD + LWRVN EF++RFR KACV R RLD A L M ++S
Sbjct: 244 ALESNKELG--SDGEQVLWRVNVQEFMHRFRHKACVENVRERLDGGAAVALSAMLEISKS 301
Query: 962 IATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSPQVGFLSRTGDHSG 1138
+ K D S PLS I V + G MT+D +R SL+ + C V
Sbjct: 302 MEKKVKTDNSVPLSINTIYEEVMKGEAGRAMTLDHLRASLVMLGCEKGV---------DE 352
Query: 1139 NYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLS-MNGPMEQSKIAGKALLDARQS 1315
+Y I+++ II+ Q EVE+IV R+G E+ RIF +LS N +E KI+ A +D ++
Sbjct: 353 SYKIDLKNIIEQAQNEEVESIVLKRYGQEAYRIFRLLSKANCLLETGKISDTAFVDKKEI 412
Query: 1316 LGVLYRLLKDGYLQLQEIARTNDHAPAKT-FYLWRVNESALKAQIVDDMYHAALNLVQRL 1492
+L+RL KD +L +++I T P +T F LW+V+++ L ++D+MYHA LNL R+
Sbjct: 413 SKILFRLWKDQFLHMEKIVVT---GPRQTQFLLWKVDKTTLWPHVLDEMYHAVLNLNLRV 469
Query: 1493 AXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIATILETSLLKLDD 1672
A PI S ++ R+R + +LE+SL+KLDD
Sbjct: 470 AYELEKENELL---------------NLPIEKRSGPLEKRYNRLRTVRLLLESSLMKLDD 514
Query: 1673 SILLFDCF 1696
+I+LF F
Sbjct: 515 AIMLFHDF 522
>KCW46437.1 hypothetical protein EUGRSUZ_K00269 [Eucalyptus grandis] KCW46438.1
hypothetical protein EUGRSUZ_K00269 [Eucalyptus grandis]
Length = 554
Score = 308 bits (790), Expect = 2e-93
Identities = 201/548 (36%), Positives = 287/548 (52%), Gaps = 12/548 (2%)
Frame = +2
Query: 89 ACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQHNCVQGFKI 268
A +I SHFGDLV KVC CL+ +G LT + +FTE++ SQ+KNCLLVLIQ NCVQ F +
Sbjct: 44 AGHIISSHFGDLVAKVCECLLRRGPLTHQNIVRFTEMSASQVKNCLLVLIQQNCVQAFSV 103
Query: 269 SSDDG-SATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXXXHGRLSFD 445
G T + T+Y D ++HRMRFPKF++ V HGRL+ +
Sbjct: 104 EHPGGVGDTSRRSTEYLALFDNIIHRMRFPKFVAVVSQELDKECVELFQGLLQHGRLTLE 163
Query: 446 QLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSVDPKKKAPRG 625
++ +RAK + ++D + E+ KL +A FVE CP EP + P S P +K
Sbjct: 164 KMIDRAK---SGQEDSTAQDATREALSKLANARFVEHCPDPEPHLSPPSEEAPARK---- 216
Query: 626 ATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL--------PKRNDHHTGAFGKKRKYV 781
T+ K+ ET E+R+ AAA+ + +RF K D G G+KRK
Sbjct: 217 RTKSSKMVAEPETIEERVLAAATPMEAKRFLIIFDTTTEEDGQKTGDSFLGV-GEKRKSD 275
Query: 782 TLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDRMFCATRS 961
LE + G SD + LWRVN EF++RFR KACV R RLD A L M ++S
Sbjct: 276 ALESNKELG--SDGEQVLWRVNVQEFMHRFRHKACVENVRERLDGGAAVALSAMLEISKS 333
Query: 962 IATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSPQVGFLSRTGDHSG 1138
+ K D S PLS I V + G MT+D +R SL+ + C V
Sbjct: 334 MEKKVKTDNSVPLSINTIYEEVMKGEAGRAMTLDHLRASLVMLGCEKGV---------DE 384
Query: 1139 NYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLS-MNGPMEQSKIAGKALLDARQS 1315
+Y I+++ II+ Q EVE+IV R+G E+ RIF +LS N +E KI+ A +D ++
Sbjct: 385 SYKIDLKNIIEQAQNEEVESIVLKRYGQEAYRIFRLLSKANCLLETGKISDTAFVDKKEI 444
Query: 1316 LGVLYRLLKDGYLQLQEIARTNDHAPAKT-FYLWRVNESALKAQIVDDMYHAALNLVQRL 1492
+L+RL KD +L +++I T P +T F LW+V+++ L ++D+MYHA LNL R+
Sbjct: 445 SKILFRLWKDQFLHMEKIVVT---GPRQTQFLLWKVDKTTLWPHVLDEMYHAVLNLNLRV 501
Query: 1493 AXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIATILETSLLKLDD 1672
A PI S ++ R+R + +LE+SL+KLDD
Sbjct: 502 AYELEKENELL---------------NLPIEKRSGPLEKRYNRLRTVRLLLESSLMKLDD 546
Query: 1673 SILLFDCF 1696
+I+LF F
Sbjct: 547 AIMLFHDF 554
>XP_016668418.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
X1 [Gossypium hirsutum]
Length = 517
Score = 306 bits (785), Expect = 3e-93
Identities = 202/559 (36%), Positives = 301/559 (53%), Gaps = 14/559 (2%)
Frame = +2
Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
MV++ + A LI +HFGDLV KVC CL+ KG LTL + + TEL SQ+KN LLVLIQ
Sbjct: 1 MVTQYGIKYAVNLITAHFGDLVAKVCECLLRKGPLTLQAIVRSTELTSSQVKNSLLVLIQ 60
Query: 242 HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
HNCVQ F + G K TQY D ++ R RFPKFL+ V
Sbjct: 61 HNCVQAFILDQTGEHGDGAKQSTQYIALFDNIIQRWRFPKFLTMVSKKLDKQCAELLEGL 120
Query: 419 XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI--PPRS 592
HGRL+ Q+ +RAK+ ++G ++ ++E+F KL++AHF+ERCP +EPV+ P +
Sbjct: 121 LQHGRLTLKQMFDRAKS----GQNGGDDV-VQEAFVKLLNAHFIERCPASEPVLTNPTKE 175
Query: 593 SVDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL---------PKRNDH 745
+K+A + K+ ET EQR+ AA + RF F +++
Sbjct: 176 EEAARKRAAKSG----KILEVQETLEQRVVEAAMPTEALRFLFATETEPTADGGKDKSNS 231
Query: 746 HTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAG 925
+ G+KRK+ LE ++ G +D+ LWR N+ EF+ R KAC+ R+R D A
Sbjct: 232 SSVTPGEKRKHDALESEAECG-ATDEQVVLWRANFDEFIRCLRHKACIENVRARFDDGAV 290
Query: 926 TVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQV 1105
V M ATRS K + S PLS I V S+EG +T DR+R SL+Q+ P
Sbjct: 291 IVFGAMLEATRSAEKKVKTENSVPLSLSSIYEEVIKSEEGRNITFDRVRASLVQLSCPP- 349
Query: 1106 GFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGP-MEQSKI 1282
F+ + +Y ++ ++II++ Q EVE+IV R+G ++ R+F +LS +G +E K+
Sbjct: 350 -FVKAANE---SYSVDFKKIIELAQNEEVESIVLKRYGRDAYRMFRLLSNSGHLLETDKV 405
Query: 1283 AGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMY 1462
A ++ +++ +LY+L KD YLQL+++ P F LW+VN++ LK ++D+M+
Sbjct: 406 ADATFVEKKETPIILYKLWKDDYLQLEKLQIGVKQIP---FQLWKVNKNTLKVHVLDEMF 462
Query: 1463 HAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSN-RQREQAERIRKIAT 1639
HAA NL QR+A LSN Q ++ R+RK
Sbjct: 463 HAAFNLSQRVAFELEQEK-----------------------ELSNVLQDKRVNRLRK-RL 498
Query: 1640 ILETSLLKLDDSILLFDCF 1696
+LE+S +KLDD+I+LF F
Sbjct: 499 LLESSQMKLDDAIMLFHDF 517
>XP_017611851.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1
[Gossypium arboreum]
Length = 517
Score = 306 bits (784), Expect = 4e-93
Identities = 203/559 (36%), Positives = 301/559 (53%), Gaps = 14/559 (2%)
Frame = +2
Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
MV++ + A LI +HFGDLV KVC CL+ KG LTL + + TEL SQ+KN LLVLIQ
Sbjct: 1 MVTQYGIKYAVNLITAHFGDLVAKVCECLLRKGPLTLQAIVRSTELTSSQVKNSLLVLIQ 60
Query: 242 HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
HNCVQ F + G K TQY D ++ R RFPKFL+ V
Sbjct: 61 HNCVQAFILDQTGEHGDGAKQSTQYIALFDNIIQRWRFPKFLTMVSKKLDKQCAELLEGL 120
Query: 419 XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI--PPRS 592
HGRLS Q+ +RAK+ ++G ++ ++E+F KL++AHF+ERCP +EPV+ P +
Sbjct: 121 LQHGRLSLKQMFDRAKS----GQNGGDDV-VQEAFVKLLNAHFIERCPASEPVLTNPTKE 175
Query: 593 SVDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL---------PKRNDH 745
+K+A + K+ ET EQR+ AA + RF F +++
Sbjct: 176 EEAARKRAAKSG----KILEVQETLEQRVVEAAMPTEALRFLFATETEPTADGGKDKSNS 231
Query: 746 HTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAG 925
+ G+KRK+ LE ++ G +D+ LWR N+ EF+ R KAC+ R+R D A
Sbjct: 232 SSVTPGEKRKHDALESEAECG-ATDEQVVLWRANFDEFIWCLRHKACIENVRARFDDGAV 290
Query: 926 TVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQV 1105
V M ATRS K + S PLS I V S+EG +T DR+R SL+Q+ P
Sbjct: 291 IVFGAMLEATRSAEKKVKTENSVPLSLSSIYEEVIKSEEGRNITFDRVRASLVQLSCPP- 349
Query: 1106 GFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGP-MEQSKI 1282
F+ + +Y ++ ++II++ Q EVE+IV R+G ++ R+F +LS +G +E K+
Sbjct: 350 -FVKAANE---SYSVDFKKIIELAQNEEVESIVLKRYGRDAYRMFRLLSNSGHLLETDKV 405
Query: 1283 AGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMY 1462
A ++ +++ +LY+L KD YLQL+++ P F LW+VN++ LK ++D+M+
Sbjct: 406 ADATFVEKKETPIILYKLWKDDYLQLEKLQIGVKQIP---FQLWKVNKNTLKVHVLDEMF 462
Query: 1463 HAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSN-RQREQAERIRKIAT 1639
HAA NL QR+A LSN Q ++ R+RK
Sbjct: 463 HAAFNLSQRVAFELEQEK-----------------------ELSNVLQDKRVNRLRK-RL 498
Query: 1640 ILETSLLKLDDSILLFDCF 1696
+LE+S +KLDD+I+LF F
Sbjct: 499 LLESSQMKLDDAIMLFHDF 517
>GAV79297.1 RNA_pol_Rpc82 domain-containing protein/HTH_9 domain-containing
protein [Cephalotus follicularis]
Length = 530
Score = 306 bits (783), Expect = 9e-93
Identities = 205/558 (36%), Positives = 292/558 (52%), Gaps = 13/558 (2%)
Frame = +2
Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
MV+++ + A +I +HFG+LV KVC CL+ +G LTL + ++TEL SQ+KN LLVLIQ
Sbjct: 1 MVTQHGIKYAVHIITAHFGNLVAKVCECLIRRGPLTLLNITRYTELTSSQVKNSLLVLIQ 60
Query: 242 HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
HNCVQ F + G G K TQY + +D +LHR+RF KFL V
Sbjct: 61 HNCVQAFILEQLGGFGEGSKFNTQYIVLVDNILHRVRFSKFLMIVSAELDNQCVELFEGL 120
Query: 419 XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI--PPRS 592
HGRL+ +Q+ +RAKA A + S KLV AH+VERCP EP++ P
Sbjct: 121 LQHGRLTVNQMLDRAKANERNGNSVVSNA-VRGSLLKLVTAHYVERCPAPEPLLALPIEE 179
Query: 593 SVDPKKKAPRGATRRIKLDVNFETEEQRIAAAAS---------LPDVERFNFYLPKRNDH 745
PKK RGA + K+ ET EQR+ +AA +P+ E N+
Sbjct: 180 EAPPKK---RGA-KSDKIIEKSETIEQRVLSAAVPWEGLRFAVIPNTESDAGAEKDENNS 235
Query: 746 HTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAG 925
T G+KRK+ +E + G + I LWR N EF++ R KAC+ R+ LD A
Sbjct: 236 STITVGEKRKHDAVEPNKENGAMDESI-VLWRANVEEFMHHLRHKACIEIVRAHLDDGAV 294
Query: 926 TVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQV 1105
TVL M ATR+ K + S PLS I V S+ G +T D +R SL Q+ S
Sbjct: 295 TVLSAMVEATRAAEKKVKTENSVPLSVNSIYEEVIKSEAGQKLTFDHVRASLGQLGSQ-- 352
Query: 1106 GFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSM-NGPMEQSKI 1282
F D + Y IN + I+++ + EVE+IVS R G + RIF +LSM N +E KI
Sbjct: 353 -FFVSAVDEA--YSINFKSIVELGRNEEVESIVSKRHGKKEYRIFRLLSMSNRFLETDKI 409
Query: 1283 AGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMY 1462
+ L + + +L +LY+L KD YL ++++ T F LW+V + L ++D+M+
Sbjct: 410 SNDTLTEKKDTLNILYKLWKDDYLHMEKVVVTGSRQ--SQFMLWKVIKHTLWEHVLDEMF 467
Query: 1463 HAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIATI 1642
HAALNL QRLA P + + +++ RI+++ ++
Sbjct: 468 HAALNLSQRLAYELEKETELLNL---------------PSDKRTGQLKDKFNRIKRVRSL 512
Query: 1643 LETSLLKLDDSILLFDCF 1696
LE+S +KLDD+ILLF F
Sbjct: 513 LESSQMKLDDAILLFHDF 530
>XP_006421933.1 hypothetical protein CICLE_v10004721mg [Citrus clementina]
XP_006490399.1 PREDICTED: uncharacterized protein
LOC102613614 isoform X1 [Citrus sinensis] ESR35173.1
hypothetical protein CICLE_v10004721mg [Citrus
clementina] KDO52033.1 hypothetical protein
CISIN_1g009725mg [Citrus sinensis]
Length = 527
Score = 305 bits (782), Expect = 1e-92
Identities = 201/560 (35%), Positives = 299/560 (53%), Gaps = 15/560 (2%)
Frame = +2
Query: 62 MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
M++ + A +I +HFGDLV KVC CL+ KG LT + ++TEL+ Q+KN LLVLIQ
Sbjct: 1 MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60
Query: 242 HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
NCVQ F DG A G KA TQY + D +LHR+RF KFL+ +
Sbjct: 61 QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120
Query: 419 XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSV 598
HGRL+ Q+ +RAK+ S + + + L E+ KLV AH+VERCP +EP++ P S
Sbjct: 121 LEHGRLTLKQMFDRAKS-SEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEE 179
Query: 599 D-PKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL-------PKRNDHHTG 754
+ P +K + ++I ET EQ++ AA + RF+ K + +
Sbjct: 180 EGPARKKGSKSAKKIG---EPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNV 236
Query: 755 AFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVL 934
G+KRK+ LE D G+ +D+ ++R N+ F+ R R K C+ R+ LD A VL
Sbjct: 237 TPGEKRKHDVLELD-ECGV-ADEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVL 294
Query: 935 DRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGFL 1114
M AT S K S PLS I V S+ G MT+D +R SL+Q+ G L
Sbjct: 295 SAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQL-----GEL 349
Query: 1115 SRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGP-MEQSKIAGK 1291
S S +Y I+ +II++ Q EVE++VS R+G ++ RIF +LS +G +E KI+
Sbjct: 350 SFVDASSDSYSIDFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISDT 409
Query: 1292 ALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMYHAA 1471
++ + + +LY+L KDGYL ++++ T A F LW+VN L ++D+M+HAA
Sbjct: 410 TFVEKKDAPKILYKLWKDGYLLMEKLVVTG--ARQSQFLLWKVNRQILWKHVLDEMFHAA 467
Query: 1472 LNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQR-----EQAERIRKIA 1636
LNL R++ D ++ ++ L +R ++ RIRK+
Sbjct: 468 LNLSLRVSY--------------------ELDREKELLNLPADKRTGPLQDRYNRIRKVR 507
Query: 1637 TILETSLLKLDDSILLFDCF 1696
+LE+S +KLDD+ILLF F
Sbjct: 508 ILLESSQMKLDDAILLFHDF 527