BLASTX nr result

ID: Ephedra29_contig00016930 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00016930
         (1963 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010251272.1 PREDICTED: DNA-directed RNA polymerase III subuni...   353   e-111
XP_001775586.1 predicted protein [Physcomitrella patens] EDQ5953...   350   e-110
XP_010662742.1 PREDICTED: DNA-directed RNA polymerase III subuni...   342   e-107
OAE35426.1 hypothetical protein AXG93_2587s1410 [Marchantia poly...   330   e-102
XP_006859054.1 PREDICTED: DNA-directed RNA polymerase III subuni...   330   e-102
XP_010924543.1 PREDICTED: DNA-directed RNA polymerase III subuni...   325   e-100
XP_018830792.1 PREDICTED: DNA-directed RNA polymerase III subuni...   325   e-100
XP_008793119.1 PREDICTED: DNA-directed RNA polymerase III subuni...   322   3e-99
EOY23205.1 RNA polymerase III subunit RPC82 family protein, puta...   321   9e-99
GAQ82610.1 RNA polymerase III subunit RPC82 family protein [Kleb...   321   2e-98
XP_007038704.2 PREDICTED: DNA-directed RNA polymerase III subuni...   319   5e-98
XP_018830793.1 PREDICTED: DNA-directed RNA polymerase III subuni...   318   4e-97
OMO97858.1 RNA polymerase III Rpc82, C -terminal [Corchorus olit...   310   2e-94
XP_012484103.1 PREDICTED: DNA-directed RNA polymerase III subuni...   309   3e-94
XP_010035145.1 PREDICTED: DNA-directed RNA polymerase III subuni...   308   7e-94
KCW46437.1 hypothetical protein EUGRSUZ_K00269 [Eucalyptus grand...   308   2e-93
XP_016668418.1 PREDICTED: DNA-directed RNA polymerase III subuni...   306   3e-93
XP_017611851.1 PREDICTED: DNA-directed RNA polymerase III subuni...   306   4e-93
GAV79297.1 RNA_pol_Rpc82 domain-containing protein/HTH_9 domain-...   306   9e-93
XP_006421933.1 hypothetical protein CICLE_v10004721mg [Citrus cl...   305   1e-92

>XP_010251272.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Nelumbo
            nucifera]
          Length = 531

 Score =  353 bits (907), Expect = e-111
 Identities = 221/563 (39%), Positives = 313/563 (55%), Gaps = 18/563 (3%)
 Frame = +2

Query: 62   MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
            M ++ + +LA  LI SHFGDLV KVC CL+ KG LTL ++ +FTEL  +Q+KNCLLVLIQ
Sbjct: 1    MATQYSIKLAISLISSHFGDLVAKVCECLLRKGSLTLADITRFTELPQAQVKNCLLVLIQ 60

Query: 242  HNCVQGFKISSDDG-SATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
            HNCVQ F I  + G  A  K  TQY    D +LHRMRFPKFL+ V               
Sbjct: 61   HNCVQAFSIQIEGGVGAAPKVITQYTAIFDNILHRMRFPKFLTIVSEELDKECEEILEGL 120

Query: 419  XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI-PPRSS 595
              HGRL+ +Q+  RA +   E     ++A + ESF ++V +H+VERCP +EP + PP   
Sbjct: 121  FQHGRLTLEQIILRAVSNQNEGNSTVQDA-VRESFVRIVSSHYVERCPASEPFLAPPDEE 179

Query: 596  VDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLPKRNDHHTG------- 754
             +P KK  + A    +L    ET E+R  +AA+  + ERF        D  +G       
Sbjct: 180  ENPTKKRAKSA----RLAEEIETLEKRAISAAAPLESERFAVITDTGTDVKSGDRSGSRF 235

Query: 755  ---AFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAG 925
               A G+KRK+  LE D  T     + E LWR N+  F+ R R KACVA  R+R+D  A 
Sbjct: 236  LDTAIGEKRKHEALEMDRETMATICEKEVLWRANFEAFIRRLRHKACVANVRARMDDGAC 295

Query: 926  TVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQV 1105
            TVL+ M  ATR+  +  K + S PLS + I   V  S+ G  MTV+R+R +L      Q+
Sbjct: 296  TVLNAMLEATRNAESRIKTENSVPLSMDAILAEVMKSEGGRSMTVERVRAAL-----GQL 350

Query: 1106 GFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGPM-EQSKI 1282
            G  S       ++ +++R II++ Q  E+E+IV  R+G ++ RIF +LS  G + E  KI
Sbjct: 351  GCRSSPRGAEDSHSVDLRNIIEIAQNDEMESIVLKRYGRDAYRIFRLLSKTGRLVETDKI 410

Query: 1283 AGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMY 1462
            +    +D +++  +LY L KD YL ++++  T+  +    F LW+VN S+L  QI+D+M 
Sbjct: 411  SDITFVDKKEAPKILYNLWKDNYLHMEKL--TSQGSKQSDFLLWKVNRSSLWKQILDEMC 468

Query: 1463 HAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQR-----EQAERIR 1627
            HAALNL QRLA                       + +  I+ L   +R     ++ ERIR
Sbjct: 469  HAALNLSQRLAY--------------------EFEQEHEILQLPREKRVGAQGKRFERIR 508

Query: 1628 KIATILETSLLKLDDSILLFDCF 1696
            K+  ILE+SL+KLDD+I+LF  F
Sbjct: 509  KVKVILESSLMKLDDAIMLFHDF 531


>XP_001775586.1 predicted protein [Physcomitrella patens] EDQ59533.1 predicted
            protein, partial [Physcomitrella patens]
          Length = 520

 Score =  350 bits (899), Expect = e-110
 Identities = 208/536 (38%), Positives = 304/536 (56%), Gaps = 14/536 (2%)
 Frame = +2

Query: 131  KVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQHNCVQGFKISSDD-GSATGKAPT 307
            KV  CLVY+G L L ++A+F+ELNPS LK+ LLVL+QH+CVQ +K+  +  GSA  +  T
Sbjct: 3    KVVKCLVYRGPLALADIARFSELNPSTLKSSLLVLVQHSCVQAYKVEHEGVGSAPPRVST 62

Query: 308  QYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXXXHGRLSFDQLKERAKAQSAERK 487
             Y    D +LHRMRFPKFL  VR                HGRL+ +Q+ +R  A++ ++ 
Sbjct: 63   SYVPLCDNILHRMRFPKFLLAVREDLGEEVGSLVEGLLEHGRLTLEQITQRTAAKAGKKV 122

Query: 488  DGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPR-SSVDPKKKAPRGATRR----IKLDV 652
                  G++E+F KLV A F+ERCP AEP + P+ S+V+P KK PRGA +     +    
Sbjct: 123  ----VKGVKETFAKLVAARFIERCPAAEPSLQPKDSNVEPPKKVPRGAAKARGPILSAQD 178

Query: 653  NFETEEQRIAAAASLPDVERFNFYLPKRNDHHTGAFGKKRKYVTLEEDSRTGMPS----- 817
                  QRI  AA+  + +RF   +           G     V  E    + +P      
Sbjct: 179  TVSEVVQRILKAAAPDETDRFRLPISMA--------GMSAPIVDNETTDPSSLPQKVNDI 230

Query: 818  --DDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDRMFCATRSIATTGKQDTS 991
              D+ E LWRVN+ +F+ + R + CV   R+RLD  A  +L  M  AT +  T+ +Q  S
Sbjct: 231  LIDEKEVLWRVNFEQFLRKLRHQTCVDMVRTRLDAGAAIILSAMLQATGNQETSARQHHS 290

Query: 992  APLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGFLSRTGDHSGNYIINIRRIIQ 1171
             PLS + IT AVRS+ +G  MT++RIR  + Q+ S  VGFL++ G+   +Y IN+  II+
Sbjct: 291  VPLSMDAITQAVRSTPDGQHMTLERIRGLVAQLASDGVGFLAKAGEGGNSYAINMHNIIE 350

Query: 1172 VTQTSEVEAIVSNRFGAESRRIFSMLSMNGPMEQSKIAGKALLDARQSLGVLYRLLKDGY 1351
              Q +EVE IV  RFG E  RI+ +L++ G +EQ +I G+  +  +    +LYRLLK+ Y
Sbjct: 351  ARQRNEVEGIVLQRFGRECCRIYRLLAIKGQLEQKQI-GERAMAPKNVKELLYRLLKEQY 409

Query: 1352 LQL-QEIARTNDHAPAKTFYLWRVNESALKAQIVDDMYHAALNLVQRLAXXXXXXXXXXX 1528
            +Q+ QEIA+T++H  +K+ YLW+VN  A+  +++DD+YHAA NL  R A           
Sbjct: 410  VQVQQEIAKTSEHIASKSIYLWKVNYRAVLYRVLDDLYHAATNLCLRHAHEIQKEQEVGL 469

Query: 1529 XXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIATILETSLLKLDDSILLFDCF 1696
                      ++    P+   +  Q++Q +RI +I  IL+ SLLKLDD+ILLF  F
Sbjct: 470  FMITI-----NTYTHPPLSQAAPAQQDQVKRISRITKILDASLLKLDDAILLFHDF 520


>XP_010662742.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1
            [Vitis vinifera] CBI22720.3 unnamed protein product,
            partial [Vitis vinifera]
          Length = 524

 Score =  342 bits (877), Expect = e-107
 Identities = 222/560 (39%), Positives = 318/560 (56%), Gaps = 15/560 (2%)
 Frame = +2

Query: 62   MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
            M ++   QLA  LI SHFG+LV KVC+CL+ KG LTL  + +FTEL P Q+K+C+LVLIQ
Sbjct: 1    MATQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQ 60

Query: 242  HNCVQGFKISSDDGSATGKAP---TQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXX 412
            HNCVQ F I  + G   G+AP   TQY      +LHRMRF KFL+ V             
Sbjct: 61   HNCVQAFAIQQEVG--FGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILE 118

Query: 413  XXXXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI-PPR 589
                HGRL+ +Q+ +RAK+  +E +   ++A L ESF KLV AHFVERCP +EP + PP 
Sbjct: 119  GLLQHGRLTLEQILDRAKSNQSEGEPVVQDA-LRESFLKLVRAHFVERCPASEPFLAPPS 177

Query: 590  SSVDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL---PKRNDHHTGAF 760
                P +K  RGA +  KL    +T EQR  AAA+  D +RF+  +      +D      
Sbjct: 178  EEETPARK--RGA-KSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGTDVDDSPNVTA 234

Query: 761  GKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDR 940
            G+KRK   LE D  TG  S + + LWR N+ EFV   R KAC+A  ++RLD  A  VL  
Sbjct: 235  GEKRKQDALELDKETG-ASCEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSA 293

Query: 941  MFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSPQVGFLS 1117
            M  ATRS     K + S PLS + I   V  S+ G  MT++R+R SL+Q+ C+P V   +
Sbjct: 294  MLEATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLGCAPCVRGAA 353

Query: 1118 RTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMN-GPMEQSKIAGKA 1294
                   +Y ++++ II++ Q  EVE+I   R+G ++ RIF +LS +   +E  KI+   
Sbjct: 354  E------SYSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISDTT 407

Query: 1295 LLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKT-FYLWRVNESALKAQIVDDMYHAA 1471
             ++ + +  +LY+L KD YLQ++++   N H   ++ F LW+V +  L   ++++MYH+A
Sbjct: 408  FVEKKDTAKILYQLWKDEYLQMEKL---NLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSA 464

Query: 1472 LNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQA-----ERIRKIA 1636
            LNL  R+A                       + +Q II L   +R  A     ER+RK+ 
Sbjct: 465  LNLSLRVAY--------------------ELEQEQEIIQLPREKRVGALGNRFERLRKVR 504

Query: 1637 TILETSLLKLDDSILLFDCF 1696
             +LE+SL+KLDD+I+LF+ F
Sbjct: 505  ILLESSLMKLDDAIMLFNDF 524


>OAE35426.1 hypothetical protein AXG93_2587s1410 [Marchantia polymorpha subsp.
            polymorpha]
          Length = 508

 Score =  330 bits (845), Expect = e-102
 Identities = 200/516 (38%), Positives = 290/516 (56%), Gaps = 19/516 (3%)
 Frame = +2

Query: 197  LNPSQLKNCLLVLIQHNCVQGFKISSDD-GSATGKAPTQYAIFLDTVLHRMRFPKFLSTV 373
            +N +QL+NCLLVL+QHNCVQGFKI  +  G    K  T Y    D +LHRMRFPKFLS V
Sbjct: 1    MNITQLRNCLLVLVQHNCVQGFKIFQEAVGPNPPKVLTSYLGLTDNILHRMRFPKFLSIV 60

Query: 374  RXXXXXXXXXXXXXXXXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVE 553
            R                HGRL+ +Q+ +RA A+ A + +   E  L+++F  LV +H++E
Sbjct: 61   RDELGEEAEALLEGLLEHGRLTLEQVVQRAAAR-AGKAESEVELPLKQTFAALVRSHYIE 119

Query: 554  RCPVAEPVIPPRSSVDPKKKAPRGATRR-----IKLDVNFETEEQRIAAAASLPDVERFN 718
            RCP +EP + P++ ++P KK PRG   +     +    N E++  RI + A+  D ERF 
Sbjct: 120  RCPASEPTVAPKA-IEPPKKVPRGPNSKGRAAKVAAIKNLESDYDRIVSVAAALDTERFR 178

Query: 719  FYLPKRNDHHTGAF----------GKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNR 868
                      TG            G+KRK   L  D++T    D+ E LWR NY E + +
Sbjct: 179  MPSSLEEVGETGGGDVSMTDPVVPGQKRKRDALAMDAKTMAIVDEKEVLWRANYEELIRK 238

Query: 869  FRQKACVAQARSRLDVSAGTVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGL 1048
             R +ACVAQ ++R+D +AG+VL  M   TRS  TT K   SAPLS   I  AV  + EG 
Sbjct: 239  LRHQACVAQVKTRIDAAAGSVLAAMLEMTRSSETTSKPQVSAPLSMTVIMQAVTMTPEGR 298

Query: 1049 GMTVDRIRTSLLQMCSPQVGFLSRTGDHSGNYIIN-IRRIIQV--TQTSEVEAIVSNRFG 1219
             MT++RIR +L QM    VGF++RTG+   +YII+   R+ ++   + S ++A+      
Sbjct: 299  TMTMERIRGALHQMAQETVGFITRTGEGGSSYIISGGHRVTEIWTGKLSNIQALDDEGAD 358

Query: 1220 AESRRIFSMLSMNGPMEQSKIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAK 1399
                   +++ M        IAG A++  + +  +LYRLLK+ Y+ +QE+A+T +H+  K
Sbjct: 359  GTKTGQLNVVLMT-------IAGMAMVQLKDARELLYRLLKEQYVVVQEVAKTAEHSAQK 411

Query: 1400 TFYLWRVNESALKAQIVDDMYHAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQP 1579
            + YLW +N   +K  ++DDMYHAA NL QRL+                   A  + G + 
Sbjct: 412  SIYLWNINWDVVKLLVLDDMYHAAGNLQQRLS--HELEQEQEVLELLKQIQAAKAAGAET 469

Query: 1580 IITLSNRQREQAERIRKIATILETSLLKLDDSILLF 1687
             +TL+ RQ EQ +RIR++A+ILE SLLKLD++ILLF
Sbjct: 470  HVTLTQRQHEQVKRIRRVASILEASLLKLDNAILLF 505


>XP_006859054.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Amborella
            trichopoda] ERN20521.1 hypothetical protein
            AMTR_s00068p00192690 [Amborella trichopoda]
          Length = 515

 Score =  330 bits (845), Expect = e-102
 Identities = 215/561 (38%), Positives = 304/561 (54%), Gaps = 16/561 (2%)
 Frame = +2

Query: 62   MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
            MV+  A+QLA +LI S FGDLV KVC CL+ KG L L  LA  TEL   QLK CLLVLIQ
Sbjct: 1    MVANQARQLAVDLITSDFGDLVAKVCKCLLKKGALPLARLAMETELPREQLKKCLLVLIQ 60

Query: 242  HNCVQGFKISSDDGSATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXX 421
            HNCVQ F+   + G     + T+Y   LD ++HR+RFPKFL  +R               
Sbjct: 61   HNCVQAFQTKKEVGGRV-MSTTEYTALLDDIIHRLRFPKFLILIRDQFDEQCECLLGILL 119

Query: 422  XHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEP--VIPPRSS 595
             HGR +F+QL +R      E   G     +   F KLV A +VERCP +EP  V+     
Sbjct: 120  SHGRSTFEQLMQRLFENQPE-VSGDITDQMRTRFAKLVQARYVERCPASEPQLVLDSEEG 178

Query: 596  VDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLPKRNDHHTGA------ 757
               KKK                T+E+R   AA+  + ERF+F     ND  T +      
Sbjct: 179  TITKKKLK-----------EIVTDEERAVMAAAPLEAERFSFPTYSDNDASTESEIMADQ 227

Query: 758  ---FGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGT 928
                G+KRK   +E D  + + + + + LWR N+ EFV   R KAC+A  R RLD+ A  
Sbjct: 228  SILVGEKRKRGVMEMDDDSIVLACEKDVLWRANFEEFVCSLRHKACIANVRPRLDIGAAV 287

Query: 929  VLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVG 1108
            VL+ +   TR+     K + SAP S   I  A+  S  G    ++ +R +L Q+ +    
Sbjct: 288  VLEAILKETRAKEKQNKAEYSAPFSMNSIVQALLGSPHG---HLEHVRAALNQLGA---- 340

Query: 1109 FLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLS-MNGPMEQSKIA 1285
              S TG   G+Y I++++II+  Q SE+E+IV  R+G+E  RIF +L+  NG +EQ +I 
Sbjct: 341  --SCTGATEGSYRISLKKIIEAAQNSEMESIVLKRYGSEGCRIFRLLADKNGMIEQKQIP 398

Query: 1286 GKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMYH 1465
              AL++ +++  +LY+L+KD YLQ++E+A     A  K F LWRVN S+L+ +I++DMYH
Sbjct: 399  NLALIETKKAFELLYKLMKDDYLQMEEVA----SAQGKLF-LWRVNRSSLQEKILNDMYH 453

Query: 1466 AALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNR----QREQAERIRKI 1633
            AA NL QRLA                    ++++  +  +   NR    Q ++ +RIRK+
Sbjct: 454  AASNLCQRLAH-------------------ETTEEHELQLLKKNRITELQEKKVDRIRKV 494

Query: 1634 ATILETSLLKLDDSILLFDCF 1696
              ILE S+L+LDDSI+LF  F
Sbjct: 495  KPILEASILRLDDSIMLFHNF 515


>XP_010924543.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc3 [Elaeis
            guineensis]
          Length = 518

 Score =  325 bits (832), Expect = e-100
 Identities = 208/556 (37%), Positives = 291/556 (52%), Gaps = 11/556 (1%)
 Frame = +2

Query: 62   MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
            M  +   +LA  LI +HFGDLV KVC+CL+++G LTL E+ +FTEL+ SQ+KNCLLVLIQ
Sbjct: 1    MAGQCGLKLAVSLITTHFGDLVAKVCSCLLHRGTLTLQEIIRFTELSSSQVKNCLLVLIQ 60

Query: 242  HNCVQGFKISSDDG-SATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
            HNCVQ F      G     KA TQY    D +LHRMRF KFL+ VR              
Sbjct: 61   HNCVQAFSTPRPAGPGGVTKAVTQYMALFDNILHRMRFAKFLAVVRDDLGPRCEILLAGL 120

Query: 419  XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSV 598
              +GRL+F QL ERA +   E      E GL  +F +LV + +VERCP  EP I P    
Sbjct: 121  LQNGRLTFGQLVERASSNKPEVSASMRE-GLRANFNRLVSSRYVERCPRPEPFIDP---- 175

Query: 599  DPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLP--------KRNDHHTG 754
             P+++      R  K      + EQ+   AA+L D ERF+            K  DH   
Sbjct: 176  SPQEETRSTRKRSAKTSEEMLSVEQQAMVAAALSDAERFSEITDTSTENIEVKATDHDPD 235

Query: 755  -AFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTV 931
             + G KRKY  LE D        + E LWR N+ +F+   ++KACVA  RS+L + AG V
Sbjct: 236  VSVGDKRKYGVLEMDQEVQAVIAENEVLWRANFEKFLLCLKKKACVAHVRSKLGLDAGVV 295

Query: 932  LDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGF 1111
            L+ M     S     K +T    + + I   VR+   G+ MT++ IR  L      Q+  
Sbjct: 296  LEAMI--ESSGQQKAKDETPVRATMDSILEGVRAKPGGISMTLEHIRVIL-----DQLRC 348

Query: 1112 LSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNG-PMEQSKIAG 1288
             S       +Y I+++ II   Q  EVEA+V  RFG E+ RIF +L  NG P E  +IA 
Sbjct: 349  QSCNWGGGASYSIDLKSIIDTCQNDEVEALVLTRFGKETYRIFRLLIKNGHPFETDRIAD 408

Query: 1289 KALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMYHA 1468
             A ++ +++ G+LY+L KD YL ++++   +  A  K  +LW+V + AL   +++D+YHA
Sbjct: 409  IAFVEKKEAQGILYKLWKDEYLDMEKV--VSHAAGQKELFLWKVKKDALWEHVLNDLYHA 466

Query: 1469 ALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIATILE 1648
            ALNL Q++A                                 +++RE+ E++R    ILE
Sbjct: 467  ALNLSQKIAHLVEQEHEV------------------------SQRREKPEQLRNSRMILE 502

Query: 1649 TSLLKLDDSILLFDCF 1696
             SLLKLDD+++LF  F
Sbjct: 503  LSLLKLDDALMLFHDF 518


>XP_018830792.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc-3 isoform X1
            [Juglans regia]
          Length = 553

 Score =  325 bits (833), Expect = e-100
 Identities = 211/571 (36%), Positives = 300/571 (52%), Gaps = 18/571 (3%)
 Frame = +2

Query: 62   MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
            MV+    +    LI +HFG+LV KVC  L+ +G LTL  + ++TEL P Q+KN LL+LIQ
Sbjct: 1    MVTEYGIKFTVNLINNHFGNLVAKVCENLLRRGPLTLQLIVRYTELTPQQVKNSLLILIQ 60

Query: 242  HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
            HNCVQ F    D G   G K+ TQY    + +LHRMRF KFL  +               
Sbjct: 61   HNCVQAFSYEQDGGLEDGPKSNTQYMALFNNILHRMRFSKFLEIISREFDDKCKELLEGL 120

Query: 419  XXHGRLSFDQLKERAKAQSAERK----DGPEEAGLEESFRKLVDAHFVERCPVAEPVIPP 586
              HGRL+  Q+ ERAK  +   K    +G  E  ++ES  KL+ A +VERCP +EPV+  
Sbjct: 121  LQHGRLTLKQMVERAKDMAERAKSRKIEGICEDLVQESLVKLLTARYVERCPASEPVLAA 180

Query: 587  RSSVDP--KKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLPKRN------- 739
            R   +   KK+ P+ A    +     +T EQR+ AAA+    +RF+      +       
Sbjct: 181  RDKEETPAKKRGPKSA----RTAEESQTLEQRVLAAAAPMGAQRFSAITNNESSVSRETS 236

Query: 740  --DHHTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLD 913
              D      G KRKY  LE         +++  LWR N+ EF+   R KAC+   R RLD
Sbjct: 237  TDDSPGMRVGAKRKYDALELHIEPAAEEEEV-VLWRANFEEFIRCLRHKACIENVRERLD 295

Query: 914  VSAGTVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM- 1090
              A TVL  M  ATRS     K + S PLS   I   V  S+EG GMT+DR+R SL+Q+ 
Sbjct: 296  DGAATVLRAMLEATRSFENKVKTEKSVPLSLNNIFEEVMKSEEGRGMTLDRVRASLVQLG 355

Query: 1091 CSPQVGFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGPM- 1267
            CSP     +R  D S  Y I++++II++ Q  EVE+IV  R+G ++ R+F +LS NG + 
Sbjct: 356  CSPS----ARGTDES--YKIDLKKIIELAQNDEVESIVLKRYGRDAYRMFRLLSKNGCLV 409

Query: 1268 EQSKIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQI 1447
            E  KIA    ++ + +  +LY+L KD YL ++++      A    F LW+VN+  L   +
Sbjct: 410  ETDKIANTTFVEKKDAPKILYKLWKDEYLHMEKLVVAG--ARQSQFLLWKVNKPCLWKHV 467

Query: 1448 VDDMYHAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIR 1627
            +D+M+HAALNL QR+A                           P+      Q E+  R++
Sbjct: 468  LDEMFHAALNLSQRVAYEREKEKEFL---------------NLPVDKQIMSQEERLNRLK 512

Query: 1628 KIATILETSLLKLDDSILLFDCF*DPSLIPL 1720
             +  +LE+SLLKL D+ +LF  F + SL+ L
Sbjct: 513  SVRIVLESSLLKLGDAFMLFHDFEESSLLKL 543


>XP_008793119.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Phoenix
            dactylifera]
          Length = 518

 Score =  322 bits (826), Expect = 3e-99
 Identities = 207/556 (37%), Positives = 290/556 (52%), Gaps = 11/556 (1%)
 Frame = +2

Query: 62   MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
            M ++   +LA  LI +HFGDLV KVC+CL+++G L+L E+ +FTEL+ SQ+KNCLLVL+Q
Sbjct: 1    MAAQCGLKLAVSLITAHFGDLVAKVCSCLLHRGTLSLQEIIRFTELSSSQIKNCLLVLVQ 60

Query: 242  HNCVQGFKISSDDG-SATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
            HNCVQ F      G     KA TQY    D +LHRMRF KFL+ VR              
Sbjct: 61   HNCVQAFSTPRPAGPGGVAKAVTQYMALFDNILHRMRFAKFLAVVRDDLGPQCEILLAGL 120

Query: 419  XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSV 598
              +GRL+F QL ERA +   E      E GL  +F +LV A +VERCP  EP I P    
Sbjct: 121  LQNGRLTFGQLVERATSSKPEVSASMRE-GLRANFNRLVSARYVERCPRPEPFIEP---- 175

Query: 599  DPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLP--------KRNDHHTG 754
             P+++      R  K      + EQR   AA+L D ERF+            K  DH + 
Sbjct: 176  SPQEETRSTRRRSAKTSEEILSIEQRAMVAAALSDAERFSEITDTATETIEVKATDHSSD 235

Query: 755  -AFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTV 931
             + G KRKY  LE D          E LW+ N+ +F+   ++KACVA  RSR  + AG V
Sbjct: 236  VSVGDKRKYGALEMDQEVQAAITQNEVLWQANFEKFLLCLKKKACVAHVRSRFGLDAGAV 295

Query: 932  LDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGF 1111
            L+ M     S     K +T    + + I   VR+   G+ MT++ IR  L      Q+  
Sbjct: 296  LEAMI--ESSGQQKAKDETPVRATMDSILEGVRAKPGGISMTLEHIRVIL-----DQLHC 348

Query: 1112 LSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNG-PMEQSKIAG 1288
             S       +Y I+++ II   Q  EVEA+V  RFG E+ RIF +L  NG P E  +IA 
Sbjct: 349  QSCNWGAGASYSIDLKSIIDTCQNDEVEALVLTRFGKEAYRIFRLLIKNGHPFETDRIAD 408

Query: 1289 KALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMYHA 1468
             A ++ + + G+LY+L KD YL ++++   +  A  K  +LW+V + AL   +++D+YHA
Sbjct: 409  IAFVEKKDAQGILYKLWKDEYLDMEKV--VSYAAGQKELFLWKVKKDALWEHVLNDLYHA 466

Query: 1469 ALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIATILE 1648
            ALNL Q++A                                 +++RE+ E++R    ILE
Sbjct: 467  ALNLSQKIAHIVEQEHEV------------------------SQRREKPEQLRNGRMILE 502

Query: 1649 TSLLKLDDSILLFDCF 1696
             SLLKLDD+++LF  F
Sbjct: 503  LSLLKLDDALMLFRDF 518


>EOY23205.1 RNA polymerase III subunit RPC82 family protein, putative isoform 1
            [Theobroma cacao]
          Length = 523

 Score =  321 bits (823), Expect = 9e-99
 Identities = 207/559 (37%), Positives = 302/559 (54%), Gaps = 14/559 (2%)
 Frame = +2

Query: 62   MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
            MV+++  + A  LI +HFGDLV KVC CL+ KG LTL  + +FTEL  SQ+KN LLVLIQ
Sbjct: 1    MVTQHGIKYAVLLITTHFGDLVAKVCECLLRKGPLTLQAIVRFTELTSSQVKNSLLVLIQ 60

Query: 242  HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
            HNCVQ F +        G K  +QY    + ++HR RFPKFL+ V               
Sbjct: 61   HNCVQAFILEQPGSHGDGAKLNSQYIALFNNIIHRWRFPKFLTIVSQKLDKQCVELIEAL 120

Query: 419  XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI--PPRS 592
              HGRL+  Q+ +RAK+   E  D   +A + E+F KL++AHFVERCP AEPV+  P   
Sbjct: 121  LLHGRLTLKQMSDRAKSAQNEGDDVILDA-VREAFIKLLNAHFVERCPAAEPVLTKPTEE 179

Query: 593  SVDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL---------PKRNDH 745
                +K+ P+ A    K+    ET EQR+  AA+  +  RF                N+ 
Sbjct: 180  ETSARKRVPKSA----KILEGKETLEQRVLEAATPSEALRFLLVTRTEPAADGGKDENNS 235

Query: 746  HTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAG 925
             +   GKKRK   LE ++  G  +D+   LWR N+ EF+ R R KA +   R+ LD  A 
Sbjct: 236  SSMTVGKKRKLDALESETE-GEATDEQVVLWRANFEEFIRRLRHKAFIENVRACLDDGAV 294

Query: 926  TVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSPQ 1102
             V+  M  ATR+     K + S PLS   I   V  S+EG  +T DR+R SL+Q+ C P 
Sbjct: 295  IVISAMLEATRTAEKKVKTENSVPLSLNSIYEEVIKSEEGRNITFDRVRASLVQLSCPPF 354

Query: 1103 VGFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGP-MEQSK 1279
            V  ++       +Y I+ ++II++ Q  EVE+IV  R+G ++ R+F +LS     +E  K
Sbjct: 355  VKAVNE------SYSIDFKKIIELAQNDEVESIVLKRYGRDAYRMFRLLSSTARLLETDK 408

Query: 1280 IAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDM 1459
            IA  A ++ + +  +LY+L KD YL ++++  T   A    F LW+VN++ L   ++D+M
Sbjct: 409  IADTAFVEKKDTTKILYKLWKDDYLHMEKLQLTG--ARQSQFLLWKVNKNTLWEHVLDEM 466

Query: 1460 YHAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIAT 1639
            +HAALNL  R+A                       + +Q    L+  Q ++  R+RK+  
Sbjct: 467  FHAALNLSLRVA----------------------HELEQEKELLNLPQDKRVNRLRKVRL 504

Query: 1640 ILETSLLKLDDSILLFDCF 1696
            +LE+S +KLDD+I+LF  F
Sbjct: 505  LLESSQMKLDDAIMLFHDF 523


>GAQ82610.1 RNA polymerase III subunit RPC82 family protein [Klebsormidium
            flaccidum]
          Length = 559

 Score =  321 bits (823), Expect = 2e-98
 Identities = 198/562 (35%), Positives = 297/562 (52%), Gaps = 17/562 (3%)
 Frame = +2

Query: 62   MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
            M S++A++LACE++   FG+ VGKVC  LV+KG  +LP+L + TEL P QL+NC+LVL Q
Sbjct: 1    MPSKHAKKLACEIVVDQFGEQVGKVCQTLVFKGQHSLPDLGRVTELTPPQLRNCVLVLSQ 60

Query: 242  HNCVQGFKISSDDGSATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXX 421
            HNCVQ +++  D  +   +    Y   +  +L R+RFP+ L  V+               
Sbjct: 61   HNCVQAYRVEPDAENPRTRPQVLYVALVSRILQRLRFPRMLLHVKEELGPDAEAVLEGLI 120

Query: 422  XHGRLSFDQLKERAKAQSA-ERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSV 598
             HGRLS  QL ERA A++  E +   +  G++E+F++LV A +VE+ P AEPV+PP S  
Sbjct: 121  EHGRLSVGQLVERASARTEDEAERSAQSEGVKEAFKQLVQARYVEKAPQAEPVLPPASEG 180

Query: 599  DPKKKAPRGATRR---IKLDVNFETEEQRIAAAASLPDVERFNF---YLPKRNDHHTGAF 760
            D KK     A  R    K  V  E+EE R    +++ D +RF      L   N   T A 
Sbjct: 181  DTKKGTRINARARAAAAKASV-VESEEARAVRLSAVSDFDRFRLPSSVLGLENGAPTAAE 239

Query: 761  GK-------KRKYVTLEEDSRTG-MPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDV 916
             K       KR+    E+ ++     +D+ E +WRVNY EF  RFR +A       R+  
Sbjct: 240  TKALSRTKRKREAELAEQAAQAAKQKADEEELVWRVNYDEFTRRFRHEAMSEFVEERMGP 299

Query: 917  SAGTVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCS 1096
            +AG  +  M   TR    +  +  S P+S E I   +RSS  G  +    IRT+L Q+  
Sbjct: 300  TAGAAVRTMLTETRGQEQSVAEKASGPVSVEAIHTILRSSPAGSALPKSSIRTALEQLAE 359

Query: 1097 PQVGFLSRTGD-HSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGPMEQ 1273
                 +++  +   G Y +++  ++   +  E+E++V NRFG  + RIF +L M   +EQ
Sbjct: 360  EGSAMVTKENELGGGTYAVDMAHVVAEMRERELESVVRNRFGQGACRIFRLLRMKRMLEQ 419

Query: 1274 SKIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVD 1453
             +I   A++  + +  +LY LLK  Y+ LQE+A+T DH  ++TFYLWRVN   +    +D
Sbjct: 420  KQIGEMAMIPIKDTRQLLYTLLKGHYVSLQELAKTADHVASRTFYLWRVNIPQVSEHALD 479

Query: 1454 DMYHAALNLVQRLA-XXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRK 1630
            +MYH A NL  RL                     A    G    +TL++ QRE+ E+ R+
Sbjct: 480  EMYHGASNLRNRLQHELAQEKELLSICDDMAAGNAAGEHGSH--VTLTSAQRERLEQFRQ 537

Query: 1631 IATILETSLLKLDDSILLFDCF 1696
            +A +LE+SLL L+  I+LF  F
Sbjct: 538  VAAVLESSLLALEKMIMLFSDF 559


>XP_007038704.2 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Theobroma
            cacao]
          Length = 523

 Score =  319 bits (818), Expect = 5e-98
 Identities = 207/559 (37%), Positives = 300/559 (53%), Gaps = 14/559 (2%)
 Frame = +2

Query: 62   MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
            MV+++  + A  LI +HFGDLV KVC CL+ KG LTL  + +FTEL  SQ+KN LLVLIQ
Sbjct: 1    MVTQHGIKYAVHLITTHFGDLVAKVCECLLRKGPLTLQAIVRFTELTSSQVKNSLLVLIQ 60

Query: 242  HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
            HNCVQ F +        G K  TQY    + ++HR RFPKFL+ V               
Sbjct: 61   HNCVQAFILEQLGSHGDGAKLNTQYIALFNNIIHRWRFPKFLTIVSQKLDKQCVELFEAL 120

Query: 419  XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI--PPRS 592
              HGRL+  Q+ +RAK+   E  D   +A + E+F KL++AHFVERCP AE V+  P   
Sbjct: 121  LLHGRLTLKQMSDRAKSAQNEGDDVILDA-VREAFIKLLNAHFVERCPAAESVLTKPTEE 179

Query: 593  SVDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL---------PKRNDH 745
                +K+ P+ A    K+    ET EQR+  AA+  +  RF                N+ 
Sbjct: 180  ETSARKRVPKSA----KILEGKETLEQRVLEAATPSEALRFLLVTRTEPAADGGKDENNS 235

Query: 746  HTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAG 925
                 GKKRK   LE ++  G  +D+   LWR N+ EF+ R R KA +   R+ LD  A 
Sbjct: 236  SNMTVGKKRKLDALESETE-GEATDEQVVLWRANFEEFIRRLRHKAFIENVRACLDDGAV 294

Query: 926  TVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSPQ 1102
             V+  M  ATR+     K + S PLS   I   V  S+EG  +T DR+R SL+Q+ C P 
Sbjct: 295  IVISAMLEATRTAEKKVKTENSVPLSLNSIYEEVIKSEEGRNITFDRVRASLVQLSCPPF 354

Query: 1103 VGFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGP-MEQSK 1279
            V  ++       +Y I+ ++II++ Q  EVE+IV  R+G ++ R+F +LS     +E  K
Sbjct: 355  VKAVNE------SYSIDFKKIIELAQNDEVESIVLKRYGRDAYRMFRLLSSTARLLETDK 408

Query: 1280 IAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDM 1459
            IA  A ++ + +  +LY+L KD YL ++++  T   A    F LW+VN++ L   ++D+M
Sbjct: 409  IADTAFVEKKDTTKILYKLWKDDYLHMEKLQLTG--ARQSQFLLWKVNKNTLWEHVLDEM 466

Query: 1460 YHAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIAT 1639
            +HAALNL  R+A                       + +Q    L+  Q ++  R+RK+  
Sbjct: 467  FHAALNLSLRVA----------------------HELEQEKELLNLPQDKRVNRLRKVRL 504

Query: 1640 ILETSLLKLDDSILLFDCF 1696
            +LE+S +KLDD+I+LF  F
Sbjct: 505  LLESSQMKLDDAIMLFHDF 523


>XP_018830793.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc-3 isoform X2
            [Juglans regia]
          Length = 547

 Score =  318 bits (814), Expect = 4e-97
 Identities = 208/571 (36%), Positives = 296/571 (51%), Gaps = 18/571 (3%)
 Frame = +2

Query: 62   MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
            MV+    +    LI +HFG+LV KVC  L+ +G LTL  + ++TEL P Q+KN LL+LIQ
Sbjct: 1    MVTEYGIKFTVNLINNHFGNLVAKVCENLLRRGPLTLQLIVRYTELTPQQVKNSLLILIQ 60

Query: 242  HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
            HNCVQ F    D G   G K+ TQY    + +LHRMRF KFL  +               
Sbjct: 61   HNCVQAFSYEQDGGLEDGPKSNTQYMALFNNILHRMRFSKFLEIISREFDDKCKELLEGL 120

Query: 419  XXHGRLSFDQLKERAKAQSAERK----DGPEEAGLEESFRKLVDAHFVERCPVAEPVIPP 586
              HGRL+  Q+ ERAK  +   K    +G  E  ++ES  KL+ A +VERCP +EPV+  
Sbjct: 121  LQHGRLTLKQMVERAKDMAERAKSRKIEGICEDLVQESLVKLLTARYVERCPASEPVLAA 180

Query: 587  RSSVDP--KKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLPKRN------- 739
            R   +   KK+ P+ A    +     +T EQR+ AAA+    +RF+      +       
Sbjct: 181  RDKEETPAKKRGPKSA----RTAEESQTLEQRVLAAAAPMGAQRFSAITNNESSVSRETS 236

Query: 740  --DHHTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLD 913
              D      G KRKY  LE         +++  LWR N+ EF+   R KAC+   R RLD
Sbjct: 237  TDDSPGMRVGAKRKYDALELHIEPAAEEEEV-VLWRANFEEFIRCLRHKACIENVRERLD 295

Query: 914  VSAGTVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM- 1090
              A TVL  M  ATRS     K + S PLS   I   V  S+EG GMT+DR+R SL+Q+ 
Sbjct: 296  DGAATVLRAMLEATRSFENKVKTEKSVPLSLNNIFEEVMKSEEGRGMTLDRVRASLVQLG 355

Query: 1091 CSPQVGFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGPM- 1267
            CSP     S  G        ++++II++ Q  EVE+IV  R+G ++ R+F +LS NG + 
Sbjct: 356  CSP-----SARG-------TDLKKIIELAQNDEVESIVLKRYGRDAYRMFRLLSKNGCLV 403

Query: 1268 EQSKIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQI 1447
            E  KIA    ++ + +  +LY+L KD YL ++++      A    F LW+VN+  L   +
Sbjct: 404  ETDKIANTTFVEKKDAPKILYKLWKDEYLHMEKLVVAG--ARQSQFLLWKVNKPCLWKHV 461

Query: 1448 VDDMYHAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIR 1627
            +D+M+HAALNL QR+A                           P+      Q E+  R++
Sbjct: 462  LDEMFHAALNLSQRVAYEREKEKEFL---------------NLPVDKQIMSQEERLNRLK 506

Query: 1628 KIATILETSLLKLDDSILLFDCF*DPSLIPL 1720
             +  +LE+SLLKL D+ +LF  F + SL+ L
Sbjct: 507  SVRIVLESSLLKLGDAFMLFHDFEESSLLKL 537


>OMO97858.1 RNA polymerase III Rpc82, C -terminal [Corchorus olitorius]
          Length = 523

 Score =  310 bits (794), Expect = 2e-94
 Identities = 202/560 (36%), Positives = 306/560 (54%), Gaps = 15/560 (2%)
 Frame = +2

Query: 62   MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
            MV++   + A  LI +HFGDLV KVC CL+ +G LTL  L KFTEL+ SQ+KN LLVLIQ
Sbjct: 1    MVTQYGIKYAVHLITTHFGDLVAKVCECLLRRGPLTLQALVKFTELSSSQVKNSLLVLIQ 60

Query: 242  HNCVQGFKISSDDGSATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXX 421
            HNCVQ F     D     K  TQY +  D ++HR RFPKFL+ V                
Sbjct: 61   HNCVQAFLPEPGDHGDADKLNTQYIVLFDNIIHRWRFPKFLNIVSEKLDEQCVKLLEGLL 120

Query: 422  XHGRLSFDQLKERAKAQSAERKDGPEEA--GLEESFRKLVDAHFVERCPVAEPVI--PPR 589
             HGRL+  Q+ +R +A+  ++K+G +        +  KL++A FVERCP AEPV+  P  
Sbjct: 121  QHGRLTLKQMSDRDRAR-LDQKEGEDVILDATRANLIKLLNARFVERCPAAEPVLAKPTE 179

Query: 590  SSVDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYLPKR-------NDHH 748
                 +K+ P+ A    K+    ET E R+  AA+  +  RF              ++ +
Sbjct: 180  EESSARKRGPKSA----KILEENETLEHRVMDAAAPSEALRFLLVTQTESAADGGLDESN 235

Query: 749  TGAF--GKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSA 922
            T +   G KRK   LE ++ +G  +D+   LWR N+ EF+ R R +AC+   R+RLD  A
Sbjct: 236  TSSLKAGVKRKSDALESETESG-AADEQVLLWRANFEEFMRRLRHEACIVNLRARLDDGA 294

Query: 923  GTVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSP 1099
              VL  M  ATRS     K + S PLS   I   V  S EG  +T DR+R SL+Q+ C P
Sbjct: 295  VIVLRAMLEATRSAEKKVKTEHSVPLSLNSIYEEVIKSVEGRNITFDRVRASLVQLSCPP 354

Query: 1100 QVGFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGP-MEQS 1276
             V  ++       +Y I+ ++II++ Q+ EVE++V  R+G+++ ++F +LS  G  +E  
Sbjct: 355  FVKAINE------SYSIDFKKIIELAQSDEVESVVLKRYGSDACKMFRLLSNTGRFVETD 408

Query: 1277 KIAGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDD 1456
            KIA   L++ +++  VLY+L KD YL ++++  T        F LW+V ++ ++  ++D+
Sbjct: 409  KIADSTLIEKKETPMVLYKLWKDDYLHMEKLQLTGTR--QSHFLLWKVKKNTIREHVLDE 466

Query: 1457 MYHAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIA 1636
            M+HAALNL  RLA                       + ++ +++LS   R+  +R+RK+ 
Sbjct: 467  MFHAALNLNLRLAY--------------------EVEQEKELLSLSQDNRD--KRLRKV- 503

Query: 1637 TILETSLLKLDDSILLFDCF 1696
             +L  S +KLDD+I++F  F
Sbjct: 504  KLLSQSQMKLDDAIMIFHDF 523


>XP_012484103.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1
            [Gossypium raimondii] KJB34119.1 hypothetical protein
            B456_006G048800 [Gossypium raimondii]
          Length = 517

 Score =  309 bits (792), Expect = 3e-94
 Identities = 203/559 (36%), Positives = 299/559 (53%), Gaps = 14/559 (2%)
 Frame = +2

Query: 62   MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
            MV++   + A  LI +HFGDLV KVC CL+ +G LTL  + + TEL  SQ+KN LLVLIQ
Sbjct: 1    MVTQYGIKYAVNLITAHFGDLVAKVCECLLRRGPLTLQAIVRSTELTSSQVKNSLLVLIQ 60

Query: 242  HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
            HNCVQ F +        G K  TQY    D ++ R RFPKFL+ V               
Sbjct: 61   HNCVQAFILDQTGEHGDGAKQSTQYIALFDNIIQRWRFPKFLTMVSKKLDKQCVELLEGL 120

Query: 419  XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI--PPRS 592
              HGRL+  Q+ +RAK+   E  D      ++E+F KL++AHF+ERCP +EPV+  P + 
Sbjct: 121  LQHGRLTLKQMFDRAKSGQNEGDD-----VVQEAFVKLLNAHFIERCPASEPVLTNPTKE 175

Query: 593  SVDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL---------PKRNDH 745
                +K+A +      K+    ET EQR+  AA   +  RF F             +++ 
Sbjct: 176  EEAARKRAAKSG----KILEVQETLEQRVVEAAMPTEALRFLFATETEPTADGGKDKSNS 231

Query: 746  HTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAG 925
             +   G+KRK+  +E ++ +G  +D+   LWR N  EF+   R KAC+   R+R D  A 
Sbjct: 232  SSVTPGEKRKHDAIESEAESG-DTDEQVVLWRANIDEFIRHLRHKACIENVRARFDDGAV 290

Query: 926  TVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQV 1105
             V   M  ATRS     K + S PLS   I   V  S+EG  +T DR+R SL+Q+  P  
Sbjct: 291  IVFGAMLEATRSAEKKVKTENSVPLSLSSIYEEVIKSEEGRNITFDRVRASLVQLSCPP- 349

Query: 1106 GFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGP-MEQSKI 1282
             F+  T +   +Y ++ ++II++ Q  EVE+IV  R+G ++ R+F +LS +G  +E  K+
Sbjct: 350  -FVKATNE---SYSVDFKKIIELAQHEEVESIVLKRYGRDAYRMFRLLSNSGHLLETDKV 405

Query: 1283 AGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMY 1462
            A    ++ +++  +LY+L KD YLQL+++       P   F LW+VN+S LK  ++D+M+
Sbjct: 406  ADATFVEKKETPIILYKLWKDDYLQLEKLQIGVKQTP---FQLWKVNKSTLKVHVLDEMF 462

Query: 1463 HAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSN-RQREQAERIRKIAT 1639
            HAA NL QR+A                               LSN  Q ++  R+RK   
Sbjct: 463  HAAFNLSQRVAFELEQEK-----------------------ELSNVLQDKRVNRLRK-RL 498

Query: 1640 ILETSLLKLDDSILLFDCF 1696
            +LE+S +KLDD+I+LF  F
Sbjct: 499  LLESSQMKLDDAIMLFHDF 517


>XP_010035145.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc3 [Eucalyptus
            grandis]
          Length = 522

 Score =  308 bits (790), Expect = 7e-94
 Identities = 201/548 (36%), Positives = 287/548 (52%), Gaps = 12/548 (2%)
 Frame = +2

Query: 89   ACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQHNCVQGFKI 268
            A  +I SHFGDLV KVC CL+ +G LT   + +FTE++ SQ+KNCLLVLIQ NCVQ F +
Sbjct: 12   AGHIISSHFGDLVAKVCECLLRRGPLTHQNIVRFTEMSASQVKNCLLVLIQQNCVQAFSV 71

Query: 269  SSDDG-SATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXXXHGRLSFD 445
                G   T +  T+Y    D ++HRMRFPKF++ V                 HGRL+ +
Sbjct: 72   EHPGGVGDTSRRSTEYLALFDNIIHRMRFPKFVAVVSQELDKECVELFQGLLQHGRLTLE 131

Query: 446  QLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSVDPKKKAPRG 625
            ++ +RAK   + ++D   +    E+  KL +A FVE CP  EP + P S   P +K    
Sbjct: 132  KMIDRAK---SGQEDSTAQDATREALSKLANARFVEHCPDPEPHLSPPSEEAPARK---- 184

Query: 626  ATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL--------PKRNDHHTGAFGKKRKYV 781
             T+  K+    ET E+R+ AAA+  + +RF             K  D   G  G+KRK  
Sbjct: 185  RTKSSKMVAEPETIEERVLAAATPMEAKRFLIIFDTTTEEDGQKTGDSFLGV-GEKRKSD 243

Query: 782  TLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDRMFCATRS 961
             LE +   G  SD  + LWRVN  EF++RFR KACV   R RLD  A   L  M   ++S
Sbjct: 244  ALESNKELG--SDGEQVLWRVNVQEFMHRFRHKACVENVRERLDGGAAVALSAMLEISKS 301

Query: 962  IATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSPQVGFLSRTGDHSG 1138
            +    K D S PLS   I   V   + G  MT+D +R SL+ + C   V           
Sbjct: 302  MEKKVKTDNSVPLSINTIYEEVMKGEAGRAMTLDHLRASLVMLGCEKGV---------DE 352

Query: 1139 NYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLS-MNGPMEQSKIAGKALLDARQS 1315
            +Y I+++ II+  Q  EVE+IV  R+G E+ RIF +LS  N  +E  KI+  A +D ++ 
Sbjct: 353  SYKIDLKNIIEQAQNEEVESIVLKRYGQEAYRIFRLLSKANCLLETGKISDTAFVDKKEI 412

Query: 1316 LGVLYRLLKDGYLQLQEIARTNDHAPAKT-FYLWRVNESALKAQIVDDMYHAALNLVQRL 1492
              +L+RL KD +L +++I  T    P +T F LW+V+++ L   ++D+MYHA LNL  R+
Sbjct: 413  SKILFRLWKDQFLHMEKIVVT---GPRQTQFLLWKVDKTTLWPHVLDEMYHAVLNLNLRV 469

Query: 1493 AXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIATILETSLLKLDD 1672
            A                           PI   S    ++  R+R +  +LE+SL+KLDD
Sbjct: 470  AYELEKENELL---------------NLPIEKRSGPLEKRYNRLRTVRLLLESSLMKLDD 514

Query: 1673 SILLFDCF 1696
            +I+LF  F
Sbjct: 515  AIMLFHDF 522


>KCW46437.1 hypothetical protein EUGRSUZ_K00269 [Eucalyptus grandis] KCW46438.1
            hypothetical protein EUGRSUZ_K00269 [Eucalyptus grandis]
          Length = 554

 Score =  308 bits (790), Expect = 2e-93
 Identities = 201/548 (36%), Positives = 287/548 (52%), Gaps = 12/548 (2%)
 Frame = +2

Query: 89   ACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQHNCVQGFKI 268
            A  +I SHFGDLV KVC CL+ +G LT   + +FTE++ SQ+KNCLLVLIQ NCVQ F +
Sbjct: 44   AGHIISSHFGDLVAKVCECLLRRGPLTHQNIVRFTEMSASQVKNCLLVLIQQNCVQAFSV 103

Query: 269  SSDDG-SATGKAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXXXXHGRLSFD 445
                G   T +  T+Y    D ++HRMRFPKF++ V                 HGRL+ +
Sbjct: 104  EHPGGVGDTSRRSTEYLALFDNIIHRMRFPKFVAVVSQELDKECVELFQGLLQHGRLTLE 163

Query: 446  QLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSVDPKKKAPRG 625
            ++ +RAK   + ++D   +    E+  KL +A FVE CP  EP + P S   P +K    
Sbjct: 164  KMIDRAK---SGQEDSTAQDATREALSKLANARFVEHCPDPEPHLSPPSEEAPARK---- 216

Query: 626  ATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL--------PKRNDHHTGAFGKKRKYV 781
             T+  K+    ET E+R+ AAA+  + +RF             K  D   G  G+KRK  
Sbjct: 217  RTKSSKMVAEPETIEERVLAAATPMEAKRFLIIFDTTTEEDGQKTGDSFLGV-GEKRKSD 275

Query: 782  TLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVLDRMFCATRS 961
             LE +   G  SD  + LWRVN  EF++RFR KACV   R RLD  A   L  M   ++S
Sbjct: 276  ALESNKELG--SDGEQVLWRVNVQEFMHRFRHKACVENVRERLDGGAAVALSAMLEISKS 333

Query: 962  IATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQM-CSPQVGFLSRTGDHSG 1138
            +    K D S PLS   I   V   + G  MT+D +R SL+ + C   V           
Sbjct: 334  MEKKVKTDNSVPLSINTIYEEVMKGEAGRAMTLDHLRASLVMLGCEKGV---------DE 384

Query: 1139 NYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLS-MNGPMEQSKIAGKALLDARQS 1315
            +Y I+++ II+  Q  EVE+IV  R+G E+ RIF +LS  N  +E  KI+  A +D ++ 
Sbjct: 385  SYKIDLKNIIEQAQNEEVESIVLKRYGQEAYRIFRLLSKANCLLETGKISDTAFVDKKEI 444

Query: 1316 LGVLYRLLKDGYLQLQEIARTNDHAPAKT-FYLWRVNESALKAQIVDDMYHAALNLVQRL 1492
              +L+RL KD +L +++I  T    P +T F LW+V+++ L   ++D+MYHA LNL  R+
Sbjct: 445  SKILFRLWKDQFLHMEKIVVT---GPRQTQFLLWKVDKTTLWPHVLDEMYHAVLNLNLRV 501

Query: 1493 AXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIATILETSLLKLDD 1672
            A                           PI   S    ++  R+R +  +LE+SL+KLDD
Sbjct: 502  AYELEKENELL---------------NLPIEKRSGPLEKRYNRLRTVRLLLESSLMKLDD 546

Query: 1673 SILLFDCF 1696
            +I+LF  F
Sbjct: 547  AIMLFHDF 554


>XP_016668418.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like isoform
            X1 [Gossypium hirsutum]
          Length = 517

 Score =  306 bits (785), Expect = 3e-93
 Identities = 202/559 (36%), Positives = 301/559 (53%), Gaps = 14/559 (2%)
 Frame = +2

Query: 62   MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
            MV++   + A  LI +HFGDLV KVC CL+ KG LTL  + + TEL  SQ+KN LLVLIQ
Sbjct: 1    MVTQYGIKYAVNLITAHFGDLVAKVCECLLRKGPLTLQAIVRSTELTSSQVKNSLLVLIQ 60

Query: 242  HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
            HNCVQ F +        G K  TQY    D ++ R RFPKFL+ V               
Sbjct: 61   HNCVQAFILDQTGEHGDGAKQSTQYIALFDNIIQRWRFPKFLTMVSKKLDKQCAELLEGL 120

Query: 419  XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI--PPRS 592
              HGRL+  Q+ +RAK+     ++G ++  ++E+F KL++AHF+ERCP +EPV+  P + 
Sbjct: 121  LQHGRLTLKQMFDRAKS----GQNGGDDV-VQEAFVKLLNAHFIERCPASEPVLTNPTKE 175

Query: 593  SVDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL---------PKRNDH 745
                +K+A +      K+    ET EQR+  AA   +  RF F             +++ 
Sbjct: 176  EEAARKRAAKSG----KILEVQETLEQRVVEAAMPTEALRFLFATETEPTADGGKDKSNS 231

Query: 746  HTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAG 925
             +   G+KRK+  LE ++  G  +D+   LWR N+ EF+   R KAC+   R+R D  A 
Sbjct: 232  SSVTPGEKRKHDALESEAECG-ATDEQVVLWRANFDEFIRCLRHKACIENVRARFDDGAV 290

Query: 926  TVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQV 1105
             V   M  ATRS     K + S PLS   I   V  S+EG  +T DR+R SL+Q+  P  
Sbjct: 291  IVFGAMLEATRSAEKKVKTENSVPLSLSSIYEEVIKSEEGRNITFDRVRASLVQLSCPP- 349

Query: 1106 GFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGP-MEQSKI 1282
             F+    +   +Y ++ ++II++ Q  EVE+IV  R+G ++ R+F +LS +G  +E  K+
Sbjct: 350  -FVKAANE---SYSVDFKKIIELAQNEEVESIVLKRYGRDAYRMFRLLSNSGHLLETDKV 405

Query: 1283 AGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMY 1462
            A    ++ +++  +LY+L KD YLQL+++       P   F LW+VN++ LK  ++D+M+
Sbjct: 406  ADATFVEKKETPIILYKLWKDDYLQLEKLQIGVKQIP---FQLWKVNKNTLKVHVLDEMF 462

Query: 1463 HAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSN-RQREQAERIRKIAT 1639
            HAA NL QR+A                               LSN  Q ++  R+RK   
Sbjct: 463  HAAFNLSQRVAFELEQEK-----------------------ELSNVLQDKRVNRLRK-RL 498

Query: 1640 ILETSLLKLDDSILLFDCF 1696
            +LE+S +KLDD+I+LF  F
Sbjct: 499  LLESSQMKLDDAIMLFHDF 517


>XP_017611851.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1
            [Gossypium arboreum]
          Length = 517

 Score =  306 bits (784), Expect = 4e-93
 Identities = 203/559 (36%), Positives = 301/559 (53%), Gaps = 14/559 (2%)
 Frame = +2

Query: 62   MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
            MV++   + A  LI +HFGDLV KVC CL+ KG LTL  + + TEL  SQ+KN LLVLIQ
Sbjct: 1    MVTQYGIKYAVNLITAHFGDLVAKVCECLLRKGPLTLQAIVRSTELTSSQVKNSLLVLIQ 60

Query: 242  HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
            HNCVQ F +        G K  TQY    D ++ R RFPKFL+ V               
Sbjct: 61   HNCVQAFILDQTGEHGDGAKQSTQYIALFDNIIQRWRFPKFLTMVSKKLDKQCAELLEGL 120

Query: 419  XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI--PPRS 592
              HGRLS  Q+ +RAK+     ++G ++  ++E+F KL++AHF+ERCP +EPV+  P + 
Sbjct: 121  LQHGRLSLKQMFDRAKS----GQNGGDDV-VQEAFVKLLNAHFIERCPASEPVLTNPTKE 175

Query: 593  SVDPKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL---------PKRNDH 745
                +K+A +      K+    ET EQR+  AA   +  RF F             +++ 
Sbjct: 176  EEAARKRAAKSG----KILEVQETLEQRVVEAAMPTEALRFLFATETEPTADGGKDKSNS 231

Query: 746  HTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAG 925
             +   G+KRK+  LE ++  G  +D+   LWR N+ EF+   R KAC+   R+R D  A 
Sbjct: 232  SSVTPGEKRKHDALESEAECG-ATDEQVVLWRANFDEFIWCLRHKACIENVRARFDDGAV 290

Query: 926  TVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQV 1105
             V   M  ATRS     K + S PLS   I   V  S+EG  +T DR+R SL+Q+  P  
Sbjct: 291  IVFGAMLEATRSAEKKVKTENSVPLSLSSIYEEVIKSEEGRNITFDRVRASLVQLSCPP- 349

Query: 1106 GFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGP-MEQSKI 1282
             F+    +   +Y ++ ++II++ Q  EVE+IV  R+G ++ R+F +LS +G  +E  K+
Sbjct: 350  -FVKAANE---SYSVDFKKIIELAQNEEVESIVLKRYGRDAYRMFRLLSNSGHLLETDKV 405

Query: 1283 AGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMY 1462
            A    ++ +++  +LY+L KD YLQL+++       P   F LW+VN++ LK  ++D+M+
Sbjct: 406  ADATFVEKKETPIILYKLWKDDYLQLEKLQIGVKQIP---FQLWKVNKNTLKVHVLDEMF 462

Query: 1463 HAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSN-RQREQAERIRKIAT 1639
            HAA NL QR+A                               LSN  Q ++  R+RK   
Sbjct: 463  HAAFNLSQRVAFELEQEK-----------------------ELSNVLQDKRVNRLRK-RL 498

Query: 1640 ILETSLLKLDDSILLFDCF 1696
            +LE+S +KLDD+I+LF  F
Sbjct: 499  LLESSQMKLDDAIMLFHDF 517


>GAV79297.1 RNA_pol_Rpc82 domain-containing protein/HTH_9 domain-containing
            protein [Cephalotus follicularis]
          Length = 530

 Score =  306 bits (783), Expect = 9e-93
 Identities = 205/558 (36%), Positives = 292/558 (52%), Gaps = 13/558 (2%)
 Frame = +2

Query: 62   MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
            MV+++  + A  +I +HFG+LV KVC CL+ +G LTL  + ++TEL  SQ+KN LLVLIQ
Sbjct: 1    MVTQHGIKYAVHIITAHFGNLVAKVCECLIRRGPLTLLNITRYTELTSSQVKNSLLVLIQ 60

Query: 242  HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
            HNCVQ F +    G   G K  TQY + +D +LHR+RF KFL  V               
Sbjct: 61   HNCVQAFILEQLGGFGEGSKFNTQYIVLVDNILHRVRFSKFLMIVSAELDNQCVELFEGL 120

Query: 419  XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVI--PPRS 592
              HGRL+ +Q+ +RAKA           A +  S  KLV AH+VERCP  EP++  P   
Sbjct: 121  LQHGRLTVNQMLDRAKANERNGNSVVSNA-VRGSLLKLVTAHYVERCPAPEPLLALPIEE 179

Query: 593  SVDPKKKAPRGATRRIKLDVNFETEEQRIAAAAS---------LPDVERFNFYLPKRNDH 745
               PKK   RGA +  K+    ET EQR+ +AA          +P+ E         N+ 
Sbjct: 180  EAPPKK---RGA-KSDKIIEKSETIEQRVLSAAVPWEGLRFAVIPNTESDAGAEKDENNS 235

Query: 746  HTGAFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAG 925
             T   G+KRK+  +E +   G   + I  LWR N  EF++  R KAC+   R+ LD  A 
Sbjct: 236  STITVGEKRKHDAVEPNKENGAMDESI-VLWRANVEEFMHHLRHKACIEIVRAHLDDGAV 294

Query: 926  TVLDRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQV 1105
            TVL  M  ATR+     K + S PLS   I   V  S+ G  +T D +R SL Q+ S   
Sbjct: 295  TVLSAMVEATRAAEKKVKTENSVPLSVNSIYEEVIKSEAGQKLTFDHVRASLGQLGSQ-- 352

Query: 1106 GFLSRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSM-NGPMEQSKI 1282
             F     D +  Y IN + I+++ +  EVE+IVS R G +  RIF +LSM N  +E  KI
Sbjct: 353  -FFVSAVDEA--YSINFKSIVELGRNEEVESIVSKRHGKKEYRIFRLLSMSNRFLETDKI 409

Query: 1283 AGKALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMY 1462
            +   L + + +L +LY+L KD YL ++++  T        F LW+V +  L   ++D+M+
Sbjct: 410  SNDTLTEKKDTLNILYKLWKDDYLHMEKVVVTGSRQ--SQFMLWKVIKHTLWEHVLDEMF 467

Query: 1463 HAALNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQREQAERIRKIATI 1642
            HAALNL QRLA                           P    + + +++  RI+++ ++
Sbjct: 468  HAALNLSQRLAYELEKETELLNL---------------PSDKRTGQLKDKFNRIKRVRSL 512

Query: 1643 LETSLLKLDDSILLFDCF 1696
            LE+S +KLDD+ILLF  F
Sbjct: 513  LESSQMKLDDAILLFHDF 530


>XP_006421933.1 hypothetical protein CICLE_v10004721mg [Citrus clementina]
            XP_006490399.1 PREDICTED: uncharacterized protein
            LOC102613614 isoform X1 [Citrus sinensis] ESR35173.1
            hypothetical protein CICLE_v10004721mg [Citrus
            clementina] KDO52033.1 hypothetical protein
            CISIN_1g009725mg [Citrus sinensis]
          Length = 527

 Score =  305 bits (782), Expect = 1e-92
 Identities = 201/560 (35%), Positives = 299/560 (53%), Gaps = 15/560 (2%)
 Frame = +2

Query: 62   MVSRNAQQLACELIQSHFGDLVGKVCNCLVYKGMLTLPELAKFTELNPSQLKNCLLVLIQ 241
            M++    + A  +I +HFGDLV KVC CL+ KG LT   + ++TEL+  Q+KN LLVLIQ
Sbjct: 1    MLTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQ 60

Query: 242  HNCVQGFKISSDDGSATG-KAPTQYAIFLDTVLHRMRFPKFLSTVRXXXXXXXXXXXXXX 418
             NCVQ F     DG A G KA TQY +  D +LHR+RF KFL+ +               
Sbjct: 61   QNCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGL 120

Query: 419  XXHGRLSFDQLKERAKAQSAERKDGPEEAGLEESFRKLVDAHFVERCPVAEPVIPPRSSV 598
              HGRL+  Q+ +RAK+ S +  +  +   L E+  KLV AH+VERCP +EP++ P S  
Sbjct: 121  LEHGRLTLKQMFDRAKS-SEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEE 179

Query: 599  D-PKKKAPRGATRRIKLDVNFETEEQRIAAAASLPDVERFNFYL-------PKRNDHHTG 754
            + P +K    + ++I      ET EQ++  AA   +  RF+           K  + +  
Sbjct: 180  EGPARKKGSKSAKKIG---EPETIEQQVVEAALPMEAMRFSVVTNVESDVGEKEKNSNNV 236

Query: 755  AFGKKRKYVTLEEDSRTGMPSDDIEALWRVNYGEFVNRFRQKACVAQARSRLDVSAGTVL 934
              G+KRK+  LE D   G+ +D+   ++R N+  F+ R R K C+   R+ LD  A  VL
Sbjct: 237  TPGEKRKHDVLELD-ECGV-ADEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVL 294

Query: 935  DRMFCATRSIATTGKQDTSAPLSQEEITNAVRSSKEGLGMTVDRIRTSLLQMCSPQVGFL 1114
              M  AT S     K   S PLS   I   V  S+ G  MT+D +R SL+Q+     G L
Sbjct: 295  SAMLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQL-----GEL 349

Query: 1115 SRTGDHSGNYIINIRRIIQVTQTSEVEAIVSNRFGAESRRIFSMLSMNGP-MEQSKIAGK 1291
            S     S +Y I+  +II++ Q  EVE++VS R+G ++ RIF +LS +G  +E  KI+  
Sbjct: 350  SFVDASSDSYSIDFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISDT 409

Query: 1292 ALLDARQSLGVLYRLLKDGYLQLQEIARTNDHAPAKTFYLWRVNESALKAQIVDDMYHAA 1471
              ++ + +  +LY+L KDGYL ++++  T   A    F LW+VN   L   ++D+M+HAA
Sbjct: 410  TFVEKKDAPKILYKLWKDGYLLMEKLVVTG--ARQSQFLLWKVNRQILWKHVLDEMFHAA 467

Query: 1472 LNLVQRLAXXXXXXXXXXXXXXXXXXXAKSSDGKQPIITLSNRQR-----EQAERIRKIA 1636
            LNL  R++                       D ++ ++ L   +R     ++  RIRK+ 
Sbjct: 468  LNLSLRVSY--------------------ELDREKELLNLPADKRTGPLQDRYNRIRKVR 507

Query: 1637 TILETSLLKLDDSILLFDCF 1696
             +LE+S +KLDD+ILLF  F
Sbjct: 508  ILLESSQMKLDDAILLFHDF 527


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