BLASTX nr result

ID: Ephedra29_contig00016909 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00016909
         (428 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006836744.1 PREDICTED: putative DNA glycosylase At3g47830 iso...    58   3e-07
XP_011620921.1 PREDICTED: putative DNA glycosylase At3g47830 iso...    58   3e-07
KFK34084.1 hypothetical protein AALP_AA5G100200 [Arabis alpina]        55   2e-06
XP_002511456.1 PREDICTED: putative DNA glycosylase At3g47830 [Ri...    55   2e-06
XP_012846824.1 PREDICTED: putative DNA glycosylase At3g47830 [Er...    53   4e-06

>XP_006836744.1 PREDICTED: putative DNA glycosylase At3g47830 isoform X2 [Amborella
           trichopoda] ERM99597.1 hypothetical protein
           AMTR_s00088p00146000 [Amborella trichopoda]
          Length = 305

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
 Frame = +2

Query: 140 PRASSLSKNDHAIDLKNAEKTESAKLGGPYSCFSYPNAQECKQVRDALLDFHGFPKEFER 319
           P    L  ++H + L N+E T SA    PY  F  P  QEC  VRDAL+  HGFP+EF  
Sbjct: 20  PSTLLLHHSEHHL-LPNSETTTSANPRSPYPNFQRPTPQECLIVRDALISLHGFPEEFAE 78

Query: 320 FRQRFY----GNEEEKMVSSEVGKVDAVAYETHESILDSL 427
           FR++        EE++    + G+V         S+LD L
Sbjct: 79  FRRKEAVVNDSFEEKQQKLDDEGEVRIAPLIQGGSVLDGL 118


>XP_011620921.1 PREDICTED: putative DNA glycosylase At3g47830 isoform X1 [Amborella
           trichopoda]
          Length = 311

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
 Frame = +2

Query: 140 PRASSLSKNDHAIDLKNAEKTESAKLGGPYSCFSYPNAQECKQVRDALLDFHGFPKEFER 319
           P    L  ++H + L N+E T SA    PY  F  P  QEC  VRDAL+  HGFP+EF  
Sbjct: 20  PSTLLLHHSEHHL-LPNSETTTSANPRSPYPNFQRPTPQECLIVRDALISLHGFPEEFAE 78

Query: 320 FRQRFY----GNEEEKMVSSEVGKVDAVAYETHESILDSL 427
           FR++        EE++    + G+V         S+LD L
Sbjct: 79  FRRKEAVVNDSFEEKQQKLDDEGEVRIAPLIQGGSVLDGL 118


>KFK34084.1 hypothetical protein AALP_AA5G100200 [Arabis alpina]
          Length = 288

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 29/70 (41%), Positives = 41/70 (58%)
 Frame = +2

Query: 218 GGPYSCFSYPNAQECKQVRDALLDFHGFPKEFERFRQRFYGNEEEKMVSSEVGKVDAVAY 397
           G PY+    P  +EC++VRDALL  HGFP EF  +R++   + +  + S     +DAV  
Sbjct: 26  GDPYASLLKPTPEECREVRDALLSLHGFPPEFAIYRRQRLRSLDGTVKSE---PLDAVKE 82

Query: 398 ETHESILDSL 427
           E  ES+LD L
Sbjct: 83  EKEESVLDGL 92


>XP_002511456.1 PREDICTED: putative DNA glycosylase At3g47830 [Ricinus communis]
           EEF52058.1 Endonuclease III, putative [Ricinus communis]
          Length = 291

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
 Frame = +2

Query: 182 LKNAE-KTESAKLGG-----PYSCFSYPNAQECKQVRDALLDFHGFPKEFERFR-QRFYG 340
           LK+AE +T+SAK+       PY     P  +EC  +RD+LL FHGFP+EF ++R QR  G
Sbjct: 9   LKSAETETKSAKINNGNKEEPYPTHPRPTPEECLCIRDSLLAFHGFPQEFAKYRKQRLGG 68

Query: 341 NEEEKMVSSEVGKVDAVAYETHESILDSL 427
           +++ K  SS+V    A      E++LD L
Sbjct: 69  DDDNK--SSDVNSDTA-----EETVLDGL 90


>XP_012846824.1 PREDICTED: putative DNA glycosylase At3g47830 [Erythranthe guttata]
          Length = 136

 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 34/107 (31%), Positives = 52/107 (48%)
 Frame = +2

Query: 107 ERSQAHDQDTGPRASSLSKNDHAIDLKNAEKTESAKLGGPYSCFSYPNAQECKQVRDALL 286
           +R Q H Q +     S   +  A          +A +  PY  +  P A+EC  VRD LL
Sbjct: 6   KRKQTHPQPSAKSPKSTVNSGCA--------AAAAAVENPYPDYPRPTAEECCSVRDDLL 57

Query: 287 DFHGFPKEFERFRQRFYGNEEEKMVSSEVGKVDAVAYETHESILDSL 427
             HGFP+EF ++R +     ++K  S++ G+ D    +  ES+LD L
Sbjct: 58  SLHGFPQEFVKYRNQ---RSKKKSKSADFGEDD----DERESVLDGL 97


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