BLASTX nr result
ID: Ephedra29_contig00016836
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00016836
(514 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ACL97387.1 Gag-Pol polyprotein [Lotus japonicus] 149 2e-38
ACL97385.1 Gag-Pol polyprotein [Medicago truncatula] 142 6e-36
ACL97384.1 Gag-Pol polyprotein [Medicago truncatula] 141 1e-35
ACL97386.1 Gag-Pol polyprotein [Medicago truncatula] 141 1e-35
ACL97383.1 Gag-Pol polyprotein [Medicago truncatula] 141 1e-35
JAT62736.1 Retrovirus-related Pol polyprotein from transposon TN... 134 2e-34
XP_016165308.1 PREDICTED: uncharacterized protein LOC107607928 [... 135 1e-33
KYP67664.1 Retrovirus-related Pol polyprotein from transposon TN... 134 4e-33
KYP38095.1 Retrovirus-related Pol polyprotein from transposon TN... 134 4e-33
KYP36645.1 Retrovirus-related Pol polyprotein from transposon TN... 134 4e-33
KYP53032.1 Retrovirus-related Pol polyprotein from transposon TN... 134 4e-33
KYP42748.1 Retrovirus-related Pol polyprotein from transposon TN... 134 4e-33
AAM91886.1 putative polyprotein [Oryza sativa Japonica Group] 133 7e-33
AAP54315.2 retrotransposon protein, putative, Ty1-copia subclass... 133 7e-33
CAD41912.2 OSJNBa0033G05.13 [Oryza sativa Japonica Group] 132 2e-32
BAF27642.2 Os11g0157000 [Oryza sativa Japonica Group] 131 2e-32
AAX92941.1 retrotransposon protein, putative, Ty1-copia sub-clas... 131 2e-32
BAH90873.1 Os01g0116166 [Oryza sativa Japonica Group] 131 3e-32
KYP50611.1 Retrovirus-related Pol polyprotein from transposon TN... 128 4e-32
AAT85194.1 putative polyprotein [Oryza sativa Japonica Group] 130 6e-32
>ACL97387.1 Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 149 bits (375), Expect = 2e-38
Identities = 74/171 (43%), Positives = 103/171 (60%)
Frame = -1
Query: 514 MTPHREWFSTYVEGVRGTVYMGNNNPCTIVGIGDVRIRMFDGTVRTISAVRHVPDLGKSL 335
MTP R+WF TY G V+MGN++ IVGIG V+I+M+DGT+RT+ VRHV +L K+L
Sbjct: 301 MTPRRDWFCTYEPVSEGNVFMGNDHALEIVGIGTVKIKMYDGTIRTLQEVRHVKELAKNL 360
Query: 334 LSIGKFDEDGYAFSGKDGMMKISKGVMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155
LS+G+ D+ GY + + G++K+ KG +VV
Sbjct: 361 LSVGQLDDLGYKYDIQGGILKVVKGSLVVMKAKKVAANLYMLLGDTWQMAD--------- 411
Query: 154 VAGVASETSMESVKIWHQRLGHMGERGLKILYDRKLLPGIQSVDLDFCEHC 2
A VA + E+ +WH+RLGHM ERGLK+L +R L+PG++SV L FCEHC
Sbjct: 412 -ASVAVGSQEETTMMWHRRLGHMSERGLKVLAERNLIPGLKSVSLPFCEHC 461
>ACL97385.1 Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 142 bits (357), Expect = 6e-36
Identities = 72/171 (42%), Positives = 100/171 (58%)
Frame = -1
Query: 514 MTPHREWFSTYVEGVRGTVYMGNNNPCTIVGIGDVRIRMFDGTVRTISAVRHVPDLGKSL 335
MTPHR+WF +Y G+VYMGN++ I G+G +R++M DGTVR I VRHV L K+L
Sbjct: 301 MTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGLKKNL 360
Query: 334 LSIGKFDEDGYAFSGKDGMMKISKGVMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155
LS+G+ D+ G + G++K+ KG +VV
Sbjct: 361 LSVGQLDDLGCKIHSESGILKVVKGNLVVMKAEKITSNLYMLLGDTLQEAD--------- 411
Query: 154 VAGVASETSMESVKIWHQRLGHMGERGLKILYDRKLLPGIQSVDLDFCEHC 2
A VA+ + E+ +WHQRLGHM ERGLK+L +R LL G+++V+L FCEHC
Sbjct: 412 -ASVAAASQEETTMMWHQRLGHMSERGLKVLVERNLLHGLKTVNLPFCEHC 461
>ACL97384.1 Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 141 bits (355), Expect = 1e-35
Identities = 72/171 (42%), Positives = 100/171 (58%)
Frame = -1
Query: 514 MTPHREWFSTYVEGVRGTVYMGNNNPCTIVGIGDVRIRMFDGTVRTISAVRHVPDLGKSL 335
MTPHR+WF +Y G+VYMGN++ I G+G +R++M DGTVR I VRHV L K+L
Sbjct: 301 MTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGLKKNL 360
Query: 334 LSIGKFDEDGYAFSGKDGMMKISKGVMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155
LS+G+ D+ G + G++K+ KG +VV
Sbjct: 361 LSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYMLLGDTLQEAD--------- 411
Query: 154 VAGVASETSMESVKIWHQRLGHMGERGLKILYDRKLLPGIQSVDLDFCEHC 2
A VA+ + E+ +WHQRLGHM ERGLK+L +R LL G+++V+L FCEHC
Sbjct: 412 -ASVAAASQEETTMMWHQRLGHMSERGLKVLVERNLLHGLKTVNLPFCEHC 461
>ACL97386.1 Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 141 bits (355), Expect = 1e-35
Identities = 72/171 (42%), Positives = 100/171 (58%)
Frame = -1
Query: 514 MTPHREWFSTYVEGVRGTVYMGNNNPCTIVGIGDVRIRMFDGTVRTISAVRHVPDLGKSL 335
MTPHR+WF +Y G+VYMGN++ I G+G +R++M DGTVR I VRHV L K+L
Sbjct: 301 MTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGLKKNL 360
Query: 334 LSIGKFDEDGYAFSGKDGMMKISKGVMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155
LS+G+ D+ G + G++K+ KG +VV
Sbjct: 361 LSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYMLLGDTLQEAD--------- 411
Query: 154 VAGVASETSMESVKIWHQRLGHMGERGLKILYDRKLLPGIQSVDLDFCEHC 2
A VA+ + E+ +WHQRLGHM ERGLK+L +R LL G+++V+L FCEHC
Sbjct: 412 -ASVAAASQEETTMMWHQRLGHMSERGLKVLVERNLLHGLKTVNLPFCEHC 461
>ACL97383.1 Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 141 bits (355), Expect = 1e-35
Identities = 72/171 (42%), Positives = 100/171 (58%)
Frame = -1
Query: 514 MTPHREWFSTYVEGVRGTVYMGNNNPCTIVGIGDVRIRMFDGTVRTISAVRHVPDLGKSL 335
MTPHR+WF +Y G+VYMGN++ I G+G +R++M DGTVR I VRHV L K+L
Sbjct: 301 MTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGLKKNL 360
Query: 334 LSIGKFDEDGYAFSGKDGMMKISKGVMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155
LS+G+ D+ G + G++K+ KG +VV
Sbjct: 361 LSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEKITSNLYMLLGDTLQEAD--------- 411
Query: 154 VAGVASETSMESVKIWHQRLGHMGERGLKILYDRKLLPGIQSVDLDFCEHC 2
A VA+ + E+ +WHQRLGHM ERGLK+L +R LL G+++V+L FCEHC
Sbjct: 412 -ASVAASSQEETTMMWHQRLGHMSERGLKVLAERNLLHGLKAVNLPFCEHC 461
>JAT62736.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Anthurium amnicola]
Length = 439
Score = 134 bits (338), Expect = 2e-34
Identities = 67/171 (39%), Positives = 93/171 (54%)
Frame = -1
Query: 514 MTPHREWFSTYVEGVRGTVYMGNNNPCTIVGIGDVRIRMFDGTVRTISAVRHVPDLGKSL 335
M PHREWF +Y V MGNNN C VGIG+++I+MFDG +R ++ VRHVP+L L
Sbjct: 183 MCPHREWFESYASHDGRIVPMGNNNECRAVGIGNIKIKMFDGVIRILTEVRHVPELRNGL 242
Query: 334 LSIGKFDEDGYAFSGKDGMMKISKGVMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155
+S+G D G F G +G++K+SKG + V
Sbjct: 243 ISLGTLDASGCTFHGANGILKVSKGALTVMKGERTGTLYRLHGKIVTGN----------- 291
Query: 154 VAGVASETSMESVKIWHQRLGHMGERGLKILYDRKLLPGIQSVDLDFCEHC 2
A + S + ++ +W+ RLGHM ERG+ L+ +KLL +QS LDFCE C
Sbjct: 292 -AAITSSSDNDATLLWYARLGHMSERGMLELHKKKLLKDVQSCKLDFCECC 341
>XP_016165308.1 PREDICTED: uncharacterized protein LOC107607928 [Arachis ipaensis]
Length = 1318
Score = 135 bits (340), Expect = 1e-33
Identities = 70/171 (40%), Positives = 100/171 (58%)
Frame = -1
Query: 514 MTPHREWFSTYVEGVRGTVYMGNNNPCTIVGIGDVRIRMFDGTVRTISAVRHVPDLGKSL 335
MTPHR+WF TY + G+V+M N++ IVG+G V+I+MFDG++R++ +RHV L K+L
Sbjct: 1 MTPHRDWFCTYEPVLEGSVFMRNDHALEIVGMGTVKIKMFDGSIRSLQGIRHVKGLKKNL 60
Query: 334 LSIGKFDEDGYAFSGKDGMMKISKGVMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155
LSIG+ DE + G++K+ KG +VV
Sbjct: 61 LSIGQLDELRCKTHIEGGILKVVKGALVVIKAEKIAANLYMLMGDTLQEAE--------- 111
Query: 154 VAGVASETSMESVKIWHQRLGHMGERGLKILYDRKLLPGIQSVDLDFCEHC 2
A VAS + E IWH +LGHM ERGLKIL +R L+PG++ ++L FC+HC
Sbjct: 112 -ASVASTSQEEMTMIWHCKLGHMSERGLKILVERNLIPGLKLLNLPFCKHC 161
>KYP67664.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1256
Score = 134 bits (336), Expect = 4e-33
Identities = 70/171 (40%), Positives = 99/171 (57%)
Frame = -1
Query: 514 MTPHREWFSTYVEGVRGTVYMGNNNPCTIVGIGDVRIRMFDGTVRTISAVRHVPDLGKSL 335
MTP+R+WF TY G+V+MGN++ I G+G ++++M+DGT+RTI VRHV L K+L
Sbjct: 251 MTPNRDWFCTYESISGGSVFMGNDHALEIAGVGTIKLKMYDGTIRTIQGVRHVKGLKKNL 310
Query: 334 LSIGKFDEDGYAFSGKDGMMKISKGVMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155
LSIG+ D+ + G++K+ KG +VV
Sbjct: 311 LSIGQLDDLKCKIHVEGGILKVVKGNLVVMKAEKITSNLYLLLGETLQEAD--------- 361
Query: 154 VAGVASETSMESVKIWHQRLGHMGERGLKILYDRKLLPGIQSVDLDFCEHC 2
A VA+ + E+ +WH+RLGHM ERGLKIL +R LL G++ V L FCEHC
Sbjct: 362 -ASVAAISQEEATMMWHRRLGHMSERGLKILAERNLLSGLKMVTLPFCEHC 411
>KYP38095.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1256
Score = 134 bits (336), Expect = 4e-33
Identities = 70/171 (40%), Positives = 99/171 (57%)
Frame = -1
Query: 514 MTPHREWFSTYVEGVRGTVYMGNNNPCTIVGIGDVRIRMFDGTVRTISAVRHVPDLGKSL 335
MTP+R+WF TY G+V+MGN++ I G+G ++++M+DGT+RTI VRHV L K+L
Sbjct: 251 MTPNRDWFCTYESISGGSVFMGNDHALEIAGVGTIKLKMYDGTIRTIQGVRHVKGLKKNL 310
Query: 334 LSIGKFDEDGYAFSGKDGMMKISKGVMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155
LSIG+ D+ + G++K+ KG +VV
Sbjct: 311 LSIGQLDDLKCKIHVEGGILKVVKGNLVVMKAEKITSNLYLLLGETLQEAD--------- 361
Query: 154 VAGVASETSMESVKIWHQRLGHMGERGLKILYDRKLLPGIQSVDLDFCEHC 2
A VA+ + E+ +WH+RLGHM ERGLKIL +R LL G++ V L FCEHC
Sbjct: 362 -ASVAAISQEEATMMWHRRLGHMSERGLKILAERNLLSGLKMVTLPFCEHC 411
>KYP36645.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1256
Score = 134 bits (336), Expect = 4e-33
Identities = 70/171 (40%), Positives = 99/171 (57%)
Frame = -1
Query: 514 MTPHREWFSTYVEGVRGTVYMGNNNPCTIVGIGDVRIRMFDGTVRTISAVRHVPDLGKSL 335
MTP+R+WF TY G+V+MGN++ I G+G ++++M+DGT+RTI VRHV L K+L
Sbjct: 251 MTPNRDWFCTYESISGGSVFMGNDHALEIAGVGTIKLKMYDGTIRTIQGVRHVKGLKKNL 310
Query: 334 LSIGKFDEDGYAFSGKDGMMKISKGVMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155
LSIG+ D+ + G++K+ KG +VV
Sbjct: 311 LSIGQLDDLKCKIHVEGGILKVVKGNLVVMKAEKITSNLYLLLGETLQEAD--------- 361
Query: 154 VAGVASETSMESVKIWHQRLGHMGERGLKILYDRKLLPGIQSVDLDFCEHC 2
A VA+ + E+ +WH+RLGHM ERGLKIL +R LL G++ V L FCEHC
Sbjct: 362 -ASVAAISQEEATMMWHRRLGHMSERGLKILAERNLLSGLKMVTLPFCEHC 411
>KYP53032.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1305
Score = 134 bits (336), Expect = 4e-33
Identities = 70/171 (40%), Positives = 99/171 (57%)
Frame = -1
Query: 514 MTPHREWFSTYVEGVRGTVYMGNNNPCTIVGIGDVRIRMFDGTVRTISAVRHVPDLGKSL 335
MTP+R+WF TY G+V+MGN++ I G+G ++++M+DGT+RTI VRHV L K+L
Sbjct: 300 MTPNRDWFCTYESISGGSVFMGNDHALEIAGVGTIKLKMYDGTIRTIQGVRHVKGLKKNL 359
Query: 334 LSIGKFDEDGYAFSGKDGMMKISKGVMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155
LSIG+ D+ + G++K+ KG +VV
Sbjct: 360 LSIGQLDDLKCKIHVEGGILKVVKGNLVVMKAEKITSNLYLLLGETLQEAD--------- 410
Query: 154 VAGVASETSMESVKIWHQRLGHMGERGLKILYDRKLLPGIQSVDLDFCEHC 2
A VA+ + E+ +WH+RLGHM ERGLKIL +R LL G++ V L FCEHC
Sbjct: 411 -ASVAAISQEEATMMWHRRLGHMSERGLKILAERNLLSGLKMVTLPFCEHC 460
>KYP42748.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1305
Score = 134 bits (336), Expect = 4e-33
Identities = 70/171 (40%), Positives = 99/171 (57%)
Frame = -1
Query: 514 MTPHREWFSTYVEGVRGTVYMGNNNPCTIVGIGDVRIRMFDGTVRTISAVRHVPDLGKSL 335
MTP+R+WF TY G+V+MGN++ I G+G ++++M+DGT+RTI VRHV L K+L
Sbjct: 300 MTPNRDWFCTYESISGGSVFMGNDHALEIAGVGTIKLKMYDGTIRTIQGVRHVKGLKKNL 359
Query: 334 LSIGKFDEDGYAFSGKDGMMKISKGVMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155
LSIG+ D+ + G++K+ KG +VV
Sbjct: 360 LSIGQLDDLKCKIHVEGGILKVVKGNLVVMKAEKITSNLYLLLGETLQEAD--------- 410
Query: 154 VAGVASETSMESVKIWHQRLGHMGERGLKILYDRKLLPGIQSVDLDFCEHC 2
A VA+ + E+ +WH+RLGHM ERGLKIL +R LL G++ V L FCEHC
Sbjct: 411 -ASVAAISQEEATMMWHRRLGHMSERGLKILAERNLLSGLKMVTLPFCEHC 460
>AAM91886.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 133 bits (334), Expect = 7e-33
Identities = 71/172 (41%), Positives = 99/172 (57%), Gaps = 1/172 (0%)
Frame = -1
Query: 514 MTPHREWFSTYVEGVRGTVYMGNNNPCTIVGIGDVRIRMFDGTVRTISAVRHVPDLGKSL 335
M P+R+WF+TY GTV MG++ PC + GIG V+I+MFDG +RT+S VRH+P+L +SL
Sbjct: 345 MCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSL 404
Query: 334 LSIGKFDEDGYAFSGKDGMMKISKGVMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155
+S+ D GY +SG DG++K++KG +VV
Sbjct: 405 ISLCTLDRKGYKYSGGDGILKVTKGSLVV----------MKADIKSANLYHLRGTTILGN 454
Query: 154 VAGVA-SETSMESVKIWHQRLGHMGERGLKILYDRKLLPGIQSVDLDFCEHC 2
VA V+ S ++ ++ +WH RLGHM E GL L R+LL G L FCEHC
Sbjct: 455 VAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHC 506
>AAP54315.2 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 133 bits (334), Expect = 7e-33
Identities = 71/172 (41%), Positives = 99/172 (57%), Gaps = 1/172 (0%)
Frame = -1
Query: 514 MTPHREWFSTYVEGVRGTVYMGNNNPCTIVGIGDVRIRMFDGTVRTISAVRHVPDLGKSL 335
M P+R+WF+TY GTV MG++ PC + GIG V+I+MFDG +RT+S VRH+P+L +SL
Sbjct: 345 MCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSDVRHIPNLKRSL 404
Query: 334 LSIGKFDEDGYAFSGKDGMMKISKGVMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155
+S+ D GY +SG DG++K++KG +VV
Sbjct: 405 ISLCTLDRKGYKYSGGDGILKVTKGSLVV----------MKADIKSANLYHLRGTTILGN 454
Query: 154 VAGVA-SETSMESVKIWHQRLGHMGERGLKILYDRKLLPGIQSVDLDFCEHC 2
VA V+ S ++ ++ +WH RLGHM E GL L R+LL G L FCEHC
Sbjct: 455 VAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHC 506
>CAD41912.2 OSJNBa0033G05.13 [Oryza sativa Japonica Group]
Length = 1181
Score = 132 bits (331), Expect = 2e-32
Identities = 71/172 (41%), Positives = 98/172 (56%), Gaps = 1/172 (0%)
Frame = -1
Query: 514 MTPHREWFSTYVEGVRGTVYMGNNNPCTIVGIGDVRIRMFDGTVRTISAVRHVPDLGKSL 335
M P+R+WF+TY GTV MG++ PC + GIG V+I+MFDG +RT+S VRH+P+L +SL
Sbjct: 310 MCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSL 369
Query: 334 LSIGKFDEDGYAFSGKDGMMKISKGVMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155
+S+ D GY +SG DG++K++KG +VV
Sbjct: 370 ISLCTLDRKGYKYSGGDGILKVTKGSLVV----------MKASIKSANLYHLQGTTILGN 419
Query: 154 VAGVA-SETSMESVKIWHQRLGHMGERGLKILYDRKLLPGIQSVDLDFCEHC 2
VA V+ S ++ ++ +WH RLGHM E GL L R LL G L FCEHC
Sbjct: 420 VATVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSISKLKFCEHC 471
>BAF27642.2 Os11g0157000 [Oryza sativa Japonica Group]
Length = 1601
Score = 131 bits (330), Expect = 2e-32
Identities = 71/172 (41%), Positives = 98/172 (56%), Gaps = 1/172 (0%)
Frame = -1
Query: 514 MTPHREWFSTYVEGVRGTVYMGNNNPCTIVGIGDVRIRMFDGTVRTISAVRHVPDLGKSL 335
M P+R+WF+TY GTV MG++ PC + GIG V+I+MFDG +RT+S VRH+P+L +SL
Sbjct: 310 MCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSL 369
Query: 334 LSIGKFDEDGYAFSGKDGMMKISKGVMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155
+S+ D GY +SG DG++K++KG +VV
Sbjct: 370 ISLCTLDRKGYKYSGGDGILKVTKGSLVV----------MKADIKSANLYHLRGTTILGN 419
Query: 154 VAGVA-SETSMESVKIWHQRLGHMGERGLKILYDRKLLPGIQSVDLDFCEHC 2
VA V+ S ++ ++ +WH RLGHM E GL L R LL G L FCEHC
Sbjct: 420 VAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHC 471
>AAX92941.1 retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] ABA91548.1 retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 2340
Score = 131 bits (330), Expect = 2e-32
Identities = 71/172 (41%), Positives = 98/172 (56%), Gaps = 1/172 (0%)
Frame = -1
Query: 514 MTPHREWFSTYVEGVRGTVYMGNNNPCTIVGIGDVRIRMFDGTVRTISAVRHVPDLGKSL 335
M P+R+WF+TY GTV MG++ PC + GIG V+I+MFDG +RT+S VRH+P+L +SL
Sbjct: 517 MCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSL 576
Query: 334 LSIGKFDEDGYAFSGKDGMMKISKGVMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155
+S+ D GY +SG DG++K++KG +VV
Sbjct: 577 ISLCTLDRKGYKYSGGDGILKVTKGSLVV----------MKADIKSANLYHLRGTTILGN 626
Query: 154 VAGVA-SETSMESVKIWHQRLGHMGERGLKILYDRKLLPGIQSVDLDFCEHC 2
VA V+ S ++ ++ +WH RLGHM E GL L R LL G L FCEHC
Sbjct: 627 VAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHC 678
>BAH90873.1 Os01g0116166 [Oryza sativa Japonica Group]
Length = 778
Score = 131 bits (329), Expect = 3e-32
Identities = 71/172 (41%), Positives = 97/172 (56%), Gaps = 1/172 (0%)
Frame = -1
Query: 514 MTPHREWFSTYVEGVRGTVYMGNNNPCTIVGIGDVRIRMFDGTVRTISAVRHVPDLGKSL 335
M P+R+WF+TY GTV MG++ PC + GIG V+I+MFDG +RT+S VRH+P+L +SL
Sbjct: 276 MCPNRDWFATYETVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSDVRHIPNLKRSL 335
Query: 334 LSIGKFDEDGYAFSGKDGMMKISKGVMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155
+S D GY +SG DG++K++KG +VV
Sbjct: 336 ISFCTLDRKGYKYSGGDGILKVTKGSLVV----------MKADIKSANLYHLRGTTILGN 385
Query: 154 VAGVA-SETSMESVKIWHQRLGHMGERGLKILYDRKLLPGIQSVDLDFCEHC 2
VA V+ S ++ ++ +WH RLGHM E GL L R LL G L FCEHC
Sbjct: 386 VAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLYGQSIGKLKFCEHC 437
>KYP50611.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 448
Score = 128 bits (322), Expect = 4e-32
Identities = 67/171 (39%), Positives = 93/171 (54%)
Frame = -1
Query: 514 MTPHREWFSTYVEGVRGTVYMGNNNPCTIVGIGDVRIRMFDGTVRTISAVRHVPDLGKSL 335
M P+R WF TY E + G V+MGN+ PC VGIG +++RM DG +RT++ VRHVPDL K+L
Sbjct: 63 MCPNRSWFLTYEERLGGRVFMGNDMPCKTVGIGTIQLRMHDGVIRTLTEVRHVPDLKKNL 122
Query: 334 LSIGKFDEDGYAFSGKDGMMKISKGVMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155
+S+G D G+ + K+G+M+I +G VV
Sbjct: 123 ISVGVLDSKGFKCNVKNGVMEIKRGSTVVMRGFKKGNLYMLQGSTSSISES--------- 173
Query: 154 VAGVASETSMESVKIWHQRLGHMGERGLKILYDRKLLPGIQSVDLDFCEHC 2
VA + + +WH RLGHM ERG+ IL ++LL +L FCEHC
Sbjct: 174 -VSVAEKNIPDLTYLWHMRLGHMSERGMMILSRQQLLGNHTVKELRFCEHC 223
>AAT85194.1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 130 bits (327), Expect = 6e-32
Identities = 70/172 (40%), Positives = 97/172 (56%), Gaps = 1/172 (0%)
Frame = -1
Query: 514 MTPHREWFSTYVEGVRGTVYMGNNNPCTIVGIGDVRIRMFDGTVRTISAVRHVPDLGKSL 335
M P+R+WF+TY GTV MG++ PC + GIG V+I+MFDG +RT+ VRH+P+L +SL
Sbjct: 219 MCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLDVRHIPNLKRSL 278
Query: 334 LSIGKFDEDGYAFSGKDGMMKISKGVMVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 155
+S+ D GY +SG DG++K++KG +VV
Sbjct: 279 ISLCTLDRKGYKYSGGDGILKVTKGSLVV----------MKADIKYANLYHLRGTTILGN 328
Query: 154 VAGVA-SETSMESVKIWHQRLGHMGERGLKILYDRKLLPGIQSVDLDFCEHC 2
VA V+ S ++ ++ +WH RLGHM E GL L R LL G L FCEHC
Sbjct: 329 VAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHC 380