BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00016816
         (1474 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAN77690.1 KNOTTED1-like homeodomain protein 2, partial [Picea a...   301   9e-95
ALN42229.1 homeobox transcription factor KN3 [Pinus pinaster]         299   5e-93
AAV54620.1 homeobox transcription factor KN3 [Pinus taeda]            297   4e-92
XP_016560168.1 PREDICTED: homeobox protein knotted-1-like LET6 i...   254   5e-77
CAD58394.2 putative knotted-1-like protein [Helianthus tuberosus]     253   8e-77
XP_017216737.1 PREDICTED: homeobox protein SBH1-like [Daucus car...   251   7e-76
AAO11694.1 Knotted-1-like homeobox protein H1 [Nicotiana tabacum]     249   3e-75
XP_015063740.1 PREDICTED: homeobox protein knotted-1-like LET6 i...   248   1e-74
XP_006348160.1 PREDICTED: homeobox protein knotted-1-like LET6-l...   244   2e-73
XP_018475927.1 PREDICTED: homeobox protein knotted-1-like 1 isof...   246   2e-73
XP_009134082.1 PREDICTED: homeobox protein knotted-1-like 1 isof...   243   3e-73
ACR83812.1 brevipedicellus, partial [Brassica napus]                  243   2e-72
XP_009134081.1 PREDICTED: homeobox protein knotted-1-like 1 isof...   243   2e-72
BAJ10713.1 shoot meristemless ortholog [Weddellina squamulosa]        241   4e-72
XP_002874518.1 hypothetical protein ARALYDRAFT_489727 [Arabidops...   242   9e-72
ACS28249.1 BREVIPEDICELLUS, partial [Brassica rapa]                   241   1e-71
ONK70249.1 uncharacterized protein A4U43_C05F31790 [Asparagus of...   246   4e-71
XP_018475926.1 PREDICTED: homeobox protein knotted-1-like 1 isof...   240   5e-71
ABO33479.1 class I KNOX homeobox transcription factor, partial [...   233   1e-69
GAU26942.1 hypothetical protein TSUD_06150 [Trifolium subterraneum]   232   1e-69

>AAN77690.1 KNOTTED1-like homeodomain protein 2, partial [Picea abies]
          Length = 383

 Score =  301 bits (770), Expect = 9e-95
 Identities = 163/301 (54%), Positives = 194/301 (64%), Gaps = 4/301 (1%)
 Frame = -3

Query: 1028 ALAHSTGKSLHIQEEDPDVIRAKIMAHVHYPRLLTAYLECQKIGAPPSVLSELETLHQNK 849
            +LA     S   +  + D ++AKI+AHVHYPRL+ AY++CQK+GAPP V+SEL+ L Q K
Sbjct: 103  SLAVDMDSSCSCKPIEADAMKAKIIAHVHYPRLVAAYIDCQKVGAPPDVVSELDELSQ-K 161

Query: 848  CQRRQYMSTISIGVDPELDQFMEAYCELFVKYKEELTRPFKEATEFLKKVEMQLSAITKD 669
            C  +Q ++TISIG DPELDQFMEAYCE+F+KY+EELT+PFKEA  FLKK+E QL A+TK 
Sbjct: 162  CHAQQCVATISIGADPELDQFMEAYCEMFIKYQEELTKPFKEAMAFLKKIENQLGALTKG 221

Query: 668  HEPLKSLXXXXXXXXXXXXXXXXXXXXXXDAMESIHRHTHGHGHGNPLAEDRALKEQLLR 489
                 SL                           +          +P AEDR LK+QLLR
Sbjct: 222  TIRTSSLDQGDERGDGAASSEEEDGSGGEVEFHEV----------DPHAEDRELKDQLLR 271

Query: 488  KYSGYLSGXXXXXXXXXXXXXXXKEARQKLLDWWTSHYKWPYPSEAQKIALAEATGLDQK 309
            KYSGYLS                KEARQKLLDWWT +YKWPYPSE+QKIALAE+TGLDQK
Sbjct: 272  KYSGYLSSLKQEFLKKKKKGKLPKEARQKLLDWWTRNYKWPYPSESQKIALAESTGLDQK 331

Query: 308  QINNWFINQRKRHWKPSEEMQFVVMETPATRHHPHPHIF----HLAPDGNPHQTFSMSMD 141
            QINNWFINQRKRHWKPSEEMQFVVM++P    +PH   F    HL  DG      + SMD
Sbjct: 332  QINNWFINQRKRHWKPSEEMQFVVMDSP----NPHNAAFFLEGHLRTDGT-----AFSMD 382

Query: 140  C 138
            C
Sbjct: 383  C 383


>ALN42229.1 homeobox transcription factor KN3 [Pinus pinaster]
          Length = 467

 Score =  299 bits (766), Expect = 5e-93
 Identities = 161/301 (53%), Positives = 192/301 (63%), Gaps = 4/301 (1%)
 Frame = -3

Query: 1028 ALAHSTGKSLHIQEEDPDVIRAKIMAHVHYPRLLTAYLECQKIGAPPSVLSELETLHQNK 849
            +LA     S   +  + D +RAKI+AHVHYPRL+ AY++CQK+GAPP V+SEL+ L  +K
Sbjct: 187  SLAVDMDSSCSCKPNEADAMRAKIIAHVHYPRLVAAYIDCQKVGAPPEVVSELDDL-SHK 245

Query: 848  CQRRQYMSTISIGVDPELDQFMEAYCELFVKYKEELTRPFKEATEFLKKVEMQLSAITKD 669
            CQ +  + TIS+G DPELDQFMEAYCE+F+KY+EELT+PFKEA  FLKK+E QL  +TK 
Sbjct: 246  CQTQHCVPTISVGADPELDQFMEAYCEMFIKYQEELTKPFKEAMAFLKKIENQLGTLTKG 305

Query: 668  HEPLKSLXXXXXXXXXXXXXXXXXXXXXXDAMESIHRHTHGHGHGNPLAEDRALKEQLLR 489
                 SL                           +          +P AEDR LK+QLLR
Sbjct: 306  TIRTSSLDQGDERGDGAASSEEEDGSGGEVEFHEV----------DPHAEDRELKDQLLR 355

Query: 488  KYSGYLSGXXXXXXXXXXXXXXXKEARQKLLDWWTSHYKWPYPSEAQKIALAEATGLDQK 309
            KYSGYLS                KEARQKLLDWWT +YKWPYPSE+QKIALAE+TGLDQK
Sbjct: 356  KYSGYLSSLKQEFLKKKKKGKLPKEARQKLLDWWTRNYKWPYPSESQKIALAESTGLDQK 415

Query: 308  QINNWFINQRKRHWKPSEEMQFVVMETPATRHHPHPHIF----HLAPDGNPHQTFSMSMD 141
            QINNWFINQRKRHWKPSEEMQFVVM++P    +PH   F    HL  DG      + SMD
Sbjct: 416  QINNWFINQRKRHWKPSEEMQFVVMDSP----NPHNAAFFLEGHLRTDGT-----AFSMD 466

Query: 140  C 138
            C
Sbjct: 467  C 467


>AAV54620.1 homeobox transcription factor KN3 [Pinus taeda]
          Length = 470

 Score =  297 bits (760), Expect = 4e-92
 Identities = 160/301 (53%), Positives = 191/301 (63%), Gaps = 4/301 (1%)
 Frame = -3

Query: 1028 ALAHSTGKSLHIQEEDPDVIRAKIMAHVHYPRLLTAYLECQKIGAPPSVLSELETLHQNK 849
            +LA     S   +  + D +RAKI+AHVHYPRL+ AY++CQK+GAPP V+ EL+ L  +K
Sbjct: 190  SLAVDMDSSCSCKPNEADAMRAKIIAHVHYPRLVAAYIDCQKVGAPPEVVLELDDL-SHK 248

Query: 848  CQRRQYMSTISIGVDPELDQFMEAYCELFVKYKEELTRPFKEATEFLKKVEMQLSAITKD 669
            CQ +  + TIS+G DPELDQFMEAYCE+F+KY+EELT+PFKEA  FLKK+E QL  +TK 
Sbjct: 249  CQTQHCVPTISVGADPELDQFMEAYCEMFIKYQEELTKPFKEAMAFLKKIENQLGTLTKG 308

Query: 668  HEPLKSLXXXXXXXXXXXXXXXXXXXXXXDAMESIHRHTHGHGHGNPLAEDRALKEQLLR 489
                 SL                           +          +P AEDR LK+QLLR
Sbjct: 309  TIRTSSLDQGDERGDGAASSEEEDGSGGEVEFHEV----------DPHAEDRELKDQLLR 358

Query: 488  KYSGYLSGXXXXXXXXXXXXXXXKEARQKLLDWWTSHYKWPYPSEAQKIALAEATGLDQK 309
            KYSGYLS                KEARQKLLDWWT +YKWPYPSE+QKIALAE+TGLDQK
Sbjct: 359  KYSGYLSSLKQEFLKKKKKGKLPKEARQKLLDWWTRNYKWPYPSESQKIALAESTGLDQK 418

Query: 308  QINNWFINQRKRHWKPSEEMQFVVMETPATRHHPHPHIF----HLAPDGNPHQTFSMSMD 141
            QINNWFINQRKRHWKPSEEMQFVVM++P    +PH   F    HL  DG      + SMD
Sbjct: 419  QINNWFINQRKRHWKPSEEMQFVVMDSP----NPHNAAFFLEGHLRTDGT-----AFSMD 469

Query: 140  C 138
            C
Sbjct: 470  C 470


>XP_016560168.1 PREDICTED: homeobox protein knotted-1-like LET6 isoform X1
           [Capsicum annuum]
          Length = 355

 Score =  254 bits (649), Expect = 5e-77
 Identities = 138/271 (50%), Positives = 165/271 (60%), Gaps = 9/271 (3%)
 Frame = -3

Query: 971 IRAKIMAHVHYPRLLTAYLECQKIGAPPSVLSELETLHQNKCQRRQYMSTIS-----IGV 807
           I++KIMAH HYPRLL AY+ CQKIGAPP V++ LE L    C     M   S     +G 
Sbjct: 95  IKSKIMAHPHYPRLLAAYINCQKIGAPPEVVARLEEL----CATSTAMGRTSGGGGIVGE 150

Query: 806 DPELDQFMEAYCELFVKYKEELTRPFKEATEFLKKVEMQLSAIT----KDHEPLKSLXXX 639
           DP LDQFMEAYCE+  KY++EL++PFKEA  FL ++E Q  A+T      HE + +L   
Sbjct: 151 DPALDQFMEAYCEMLTKYEQELSKPFKEAMVFLSRIECQFKALTLAANSSHESVAALGEA 210

Query: 638 XXXXXXXXXXXXXXXXXXXDAMESIHRHTHGHGHGNPLAEDRALKEQLLRKYSGYLSGXX 459
                                  S       +G  +P AEDR LK QLLRKYSGYL    
Sbjct: 211 MDRNG-----------------SSDEEVDVNNGFVDPQAEDRELKGQLLRKYSGYLGSLK 253

Query: 458 XXXXXXXXXXXXXKEARQKLLDWWTSHYKWPYPSEAQKIALAEATGLDQKQINNWFINQR 279
                        KEARQ+LLDWWT HYKWPYPSE+QK+ALAE+TGLDQKQINNWFINQR
Sbjct: 254 QEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSESQKLALAESTGLDQKQINNWFINQR 313

Query: 278 KRHWKPSEEMQFVVMETPATRHHPHPHIFHL 186
           KRHWKPSE+MQFVVM+        HPH +++
Sbjct: 314 KRHWKPSEDMQFVVMDA------AHPHNYYM 338


>CAD58394.2 putative knotted-1-like protein [Helianthus tuberosus]
          Length = 348

 Score =  253 bits (647), Expect = 8e-77
 Identities = 139/285 (48%), Positives = 167/285 (58%), Gaps = 16/285 (5%)
 Frame = -3

Query: 971 IRAKIMAHVHYPRLLTAYLECQKIGAPPSVLSELETLHQNKCQRRQY------------- 831
           ++AKIM+H HYPRLL+AYL CQKIGAPP V+  LE   +                     
Sbjct: 77  VKAKIMSHPHYPRLLSAYLNCQKIGAPPEVVERLEEACRASVMAAMSSRSGSDGAGTSGG 136

Query: 830 ---MSTISIGVDPELDQFMEAYCELFVKYKEELTRPFKEATEFLKKVEMQLSAITKDHEP 660
              MS+  +G DP LDQFMEAYCE+ +KY++EL++PFKEA  FL ++E Q  AIT  +  
Sbjct: 137 GAGMSSSIVGQDPALDQFMEAYCEMLIKYEQELSKPFKEAMLFLSRMESQFKAITFSNSD 196

Query: 659 LKSLXXXXXXXXXXXXXXXXXXXXXXDAMESIHRHTHGHGHGNPLAEDRALKEQLLRKYS 480
                                      + E +    + +G  +P AEDR LK QLLRKYS
Sbjct: 197 --------------SGCGEGGMDRNGSSEEELDVDMNNNGMVDPQAEDRELKGQLLRKYS 242

Query: 479 GYLSGXXXXXXXXXXXXXXXKEARQKLLDWWTSHYKWPYPSEAQKIALAEATGLDQKQIN 300
           GYL                 KEARQ+LLDWWT HYKWPYPSEAQK+ALAE+TGLDQKQIN
Sbjct: 243 GYLGSLKQEFMKKRKEGKLPKEARQQLLDWWTRHYKWPYPSEAQKLALAESTGLDQKQIN 302

Query: 299 NWFINQRKRHWKPSEEMQFVVMETPATRHHPHPHIFHLAPDGNPH 165
           NWFINQRKRHWKPSE+MQFVVM+        HPH F     GNP+
Sbjct: 303 NWFINQRKRHWKPSEDMQFVVMDA------AHPHYFIDNIFGNPY 341


>XP_017216737.1 PREDICTED: homeobox protein SBH1-like [Daucus carota subsp.
           sativus]
          Length = 353

 Score =  251 bits (641), Expect = 7e-76
 Identities = 139/269 (51%), Positives = 171/269 (63%), Gaps = 1/269 (0%)
 Frame = -3

Query: 971 IRAKIMAHVHYPRLLTAYLECQKIGAPPSVLSELETLHQNKCQRRQYMSTIS-IGVDPEL 795
           ++AKIMAH HY RLL AY+ CQKIGAPP V++ LE  +      R   S  S IG DP L
Sbjct: 95  VKAKIMAHPHYHRLLAAYINCQKIGAPPEVVARLEEAYVTMGASRGGSSGPSAIGQDPAL 154

Query: 794 DQFMEAYCELFVKYKEELTRPFKEATEFLKKVEMQLSAITKDHEPLKSLXXXXXXXXXXX 615
           DQFMEAYCE+  KY++EL +PFKEA  FL K+E Q  A+T     + SL           
Sbjct: 155 DQFMEAYCEMLGKYEQELAKPFKEAMHFLTKIEYQFKALT-----VSSLDSSACPDPMDG 209

Query: 614 XXXXXXXXXXXDAMESIHRHTHGHGHGNPLAEDRALKEQLLRKYSGYLSGXXXXXXXXXX 435
                       + E +H +   +G  +P AEDR LK QLLRKYSGYL            
Sbjct: 210 NAS---------SEEEVHLN---NGLVDPQAEDRKLKGQLLRKYSGYLGNLKQEFMKKRK 257

Query: 434 XXXXXKEARQKLLDWWTSHYKWPYPSEAQKIALAEATGLDQKQINNWFINQRKRHWKPSE 255
                KEARQ+L++WW+ +YKWPYPSE+QK+ALAEATGLDQKQINNWFINQRKRHWKPS+
Sbjct: 258 KGKLPKEARQQLMEWWSKNYKWPYPSESQKVALAEATGLDQKQINNWFINQRKRHWKPSD 317

Query: 254 EMQFVVMETPATRHHPHPHIFHLAPDGNP 168
           EMQFV+M+  A  HHPH ++ ++   GNP
Sbjct: 318 EMQFVMMDA-AAAHHPHYYMDNVY--GNP 343


>AAO11694.1 Knotted-1-like homeobox protein H1 [Nicotiana tabacum]
          Length = 343

 Score =  249 bits (636), Expect = 3e-75
 Identities = 142/315 (45%), Positives = 182/315 (57%), Gaps = 10/315 (3%)
 Frame = -3

Query: 1082 DGKDNVKNSVNPPLVVTPALAHSTGKSLHIQEEDPDVIRAKIMAHVHYPRLLTAYLECQK 903
            +  +N+  + N  ++  P + ++              I++KIMAH HYPRLL+AY+ CQK
Sbjct: 50   ESSNNIGGNNNNNILFLPFMDNNNNNPHEDANCSSTSIKSKIMAHPHYPRLLSAYVNCQK 109

Query: 902  IGAPPSVLSELETLHQNKCQRRQYMSTISIGVDPELDQFMEAYCELFVKYKEELTRPFKE 723
            IGAPP V++ LE +        +    I IG DP LDQFMEAYCE+  KY++EL++PFKE
Sbjct: 110  IGAPPEVVARLEEVCATSATIGRNSGGI-IGEDPALDQFMEAYCEMLTKYEQELSKPFKE 168

Query: 722  ATEFLKKVEMQLSAIT--KDHEPLKSLXXXXXXXXXXXXXXXXXXXXXXDAMESIHRHTH 549
            A  FL ++E Q  A+T     E + +L                         E+I R+ +
Sbjct: 169  AMVFLSRIECQFKALTLTSSSESVAALG------------------------EAIDRNGN 204

Query: 548  G--------HGHGNPLAEDRALKEQLLRKYSGYLSGXXXXXXXXXXXXXXXKEARQKLLD 393
            G        +G  +  AED+ LK QLLRKYSGYL                 KEARQ+LLD
Sbjct: 205  GSSEEVDVNNGFIDLQAEDQELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLD 264

Query: 392  WWTSHYKWPYPSEAQKIALAEATGLDQKQINNWFINQRKRHWKPSEEMQFVVMETPATRH 213
            WWT HYKWPYPSE+QK+ALAE+TGLDQKQINNWFINQRKRHWKPSE+MQFVVM+      
Sbjct: 265  WWTRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDA----- 319

Query: 212  HPHPHIFHLAPDGNP 168
              HPH +     GNP
Sbjct: 320  -AHPHYYMDNVLGNP 333


>XP_015063740.1 PREDICTED: homeobox protein knotted-1-like LET6 isoform X1 [Solanum
            pennellii]
          Length = 350

 Score =  248 bits (632), Expect = 1e-74
 Identities = 138/297 (46%), Positives = 172/297 (57%), Gaps = 7/297 (2%)
 Frame = -3

Query: 1073 DNVKNSVNPPLVVTPALAHSTGKSLHIQEEDPDVIRAKIMAHVHYPRLLTAYLECQKIGA 894
            +N   + N  ++  P L ++   +          I++KIMAH HY RLLTAYL CQKIGA
Sbjct: 55   NNNAETSNNNILFLPFLDNNNNNNPQEDNNSSSSIKSKIMAHPHYHRLLTAYLNCQKIGA 114

Query: 893  PPSVLSELETLHQNKCQRRQYMSTIS---IGVDPELDQFMEAYCELFVKYKEELTRPFKE 723
            PP V++ LE +        +  S+ S   IG DP LDQFMEAYCE+ +KY++EL++PFKE
Sbjct: 115  PPEVVARLEEICATSATMGRSSSSSSGGIIGEDPALDQFMEAYCEMLIKYEQELSKPFKE 174

Query: 722  ATEFLKKVEMQLSAIT----KDHEPLKSLXXXXXXXXXXXXXXXXXXXXXXDAMESIHRH 555
            A  FL ++E Q  A+T      HE + +L                          S    
Sbjct: 175  AMVFLSRIECQFKALTLAPNSSHESVVALGEAMDRNG-----------------SSDEEV 217

Query: 554  THGHGHGNPLAEDRALKEQLLRKYSGYLSGXXXXXXXXXXXXXXXKEARQKLLDWWTSHY 375
               +   +P AEDR LK QLLRKYSGYL                 KEARQ+L+DWW  H 
Sbjct: 218  DVNNSFIDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLVDWWLRHI 277

Query: 374  KWPYPSEAQKIALAEATGLDQKQINNWFINQRKRHWKPSEEMQFVVMETPATRHHPH 204
            KWPYPSE+QK+ALAE+TGLDQKQINNWFINQRKRHWKPSE+MQFVVM+      HPH
Sbjct: 278  KWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAA----HPH 330


>XP_006348160.1 PREDICTED: homeobox protein knotted-1-like LET6-like isoform X1
           [Solanum tuberosum]
          Length = 345

 Score =  244 bits (624), Expect = 2e-73
 Identities = 134/261 (51%), Positives = 158/261 (60%), Gaps = 5/261 (1%)
 Frame = -3

Query: 971 IRAKIMAHVHYPRLLTAYLECQKIGAPPSVLSELETLHQNKCQR-RQYMSTISIGVDPEL 795
           I++KIMAH HYPRLL AYL CQKIGAPP V++ LE +        R   S   IG DP L
Sbjct: 86  IKSKIMAHPHYPRLLAAYLSCQKIGAPPEVVARLEEICATSATMGRNSSSGGIIGEDPAL 145

Query: 794 DQFMEAYCELFVKYKEELTRPFKEATEFLKKVEMQLSAIT----KDHEPLKSLXXXXXXX 627
           DQFMEAYCE+  KY++EL++PFKEA  FL ++E Q  A+T      HE + +L       
Sbjct: 146 DQFMEAYCEMLTKYEQELSKPFKEAMVFLSRIECQFKALTLAPNSSHESVVALGEAMDRN 205

Query: 626 XXXXXXXXXXXXXXXDAMESIHRHTHGHGHGNPLAEDRALKEQLLRKYSGYLSGXXXXXX 447
                              S       +   +P AEDR LK QLLRKYSGYL        
Sbjct: 206 G-----------------SSDEEVDVNNSFIDPQAEDRELKGQLLRKYSGYLGSLKQEFM 248

Query: 446 XXXXXXXXXKEARQKLLDWWTSHYKWPYPSEAQKIALAEATGLDQKQINNWFINQRKRHW 267
                    KEARQ+L+DWW  H KWPYPSE+QK+ALAE+TGLDQKQINNWFINQRKRHW
Sbjct: 249 KKRKKGKLPKEARQQLVDWWLRHIKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHW 308

Query: 266 KPSEEMQFVVMETPATRHHPH 204
           KPSE+MQFVVM+      HPH
Sbjct: 309 KPSEDMQFVVMDAA----HPH 325


>XP_018475927.1 PREDICTED: homeobox protein knotted-1-like 1 isoform X2 [Raphanus
           sativus]
          Length = 388

 Score =  246 bits (627), Expect = 2e-73
 Identities = 134/281 (47%), Positives = 171/281 (60%), Gaps = 10/281 (3%)
 Frame = -3

Query: 983 DPDVIRAKIMAHVHYPRLLTAYLECQKIGAPPSVLSELETLHQN--KCQRRQYMSTISIG 810
           D + ++AKI+AH HYP LL AYL+CQKIGAPP V+ ++    +     Q+R   S  ++ 
Sbjct: 119 DTESMKAKIIAHPHYPTLLHAYLDCQKIGAPPEVVDKITAARKEFETRQQRPIASVTALS 178

Query: 809 VDPELDQFMEAYCELFVKYKEELTRPFKEATEFLKKVEMQLSAITKDHEPLKSLXXXXXX 630
            DPELDQFMEAYC++ VKY+EELTRP +EA E+++++E Q+S + +   P+  L      
Sbjct: 179 RDPELDQFMEAYCDMLVKYQEELTRPIEEAMEYIRRIESQISMLCQG--PIHIL------ 230

Query: 629 XXXXXXXXXXXXXXXXDAMESIHRHTHGHGHG--------NPLAEDRALKEQLLRKYSGY 474
                           + MES       +  G        +P AEDR LK  LL+KYSGY
Sbjct: 231 ---------NNPDGKSEGMESSDEEQENNNSGGEAELPEIDPRAEDRELKNHLLKKYSGY 281

Query: 473 LSGXXXXXXXXXXXXXXXKEARQKLLDWWTSHYKWPYPSEAQKIALAEATGLDQKQINNW 294
           LS                KEARQKLL WW  HYKWPYPSE++K+ALAE+TGLDQKQINNW
Sbjct: 282 LSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNW 341

Query: 293 FINQRKRHWKPSEEMQFVVMETPATRHHPHPHIFHLAPDGN 171
           FINQRKRHWKPSE+MQF+VM+        HPH   L  DG+
Sbjct: 342 FINQRKRHWKPSEDMQFMVMD-----GLQHPHHAALYMDGH 377


>XP_009134082.1 PREDICTED: homeobox protein knotted-1-like 1 isoform X2 [Brassica
           rapa] XP_013680901.1 PREDICTED: homeobox protein
           knotted-1-like 1 isoform X2 [Brassica napus]
          Length = 322

 Score =  243 bits (621), Expect = 3e-73
 Identities = 134/281 (47%), Positives = 170/281 (60%), Gaps = 10/281 (3%)
 Frame = -3

Query: 983 DPDVIRAKIMAHVHYPRLLTAYLECQKIGAPPSVLSELETLHQN--KCQRRQYMSTISIG 810
           D + ++AKI+AH HY  LL AYL+CQKIGAPP V+ ++    Q     Q+R   S  ++ 
Sbjct: 53  DMESMKAKIIAHPHYSTLLHAYLDCQKIGAPPEVVDKITAARQEFEARQQRPTASVTALS 112

Query: 809 VDPELDQFMEAYCELFVKYKEELTRPFKEATEFLKKVEMQLSAITKDHEPLKSLXXXXXX 630
            DPELDQFMEAYC++ VKY+EELTRP +EA E+++++E Q+S + +   P+  L      
Sbjct: 113 RDPELDQFMEAYCDMLVKYREELTRPIEEAMEYIRRIESQISMLCQG--PIHIL------ 164

Query: 629 XXXXXXXXXXXXXXXXDAMESIHRHTHGHGHG--------NPLAEDRALKEQLLRKYSGY 474
                           + MES       +  G        +P AEDR LK  LL+KYSGY
Sbjct: 165 ---------NNPDGKSEGMESSDEEQDNNNSGGEAELPEIDPRAEDRELKNHLLKKYSGY 215

Query: 473 LSGXXXXXXXXXXXXXXXKEARQKLLDWWTSHYKWPYPSEAQKIALAEATGLDQKQINNW 294
           LS                KEARQKLL WW  HYKWPYPSE++K+ALAE+TGLDQKQINNW
Sbjct: 216 LSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNW 275

Query: 293 FINQRKRHWKPSEEMQFVVMETPATRHHPHPHIFHLAPDGN 171
           FINQRKRHWKPSE+MQF+VM+        HPH   L  DG+
Sbjct: 276 FINQRKRHWKPSEDMQFMVMD-----GLQHPHHAALYMDGH 311


>ACR83812.1 brevipedicellus, partial [Brassica napus]
          Length = 358

 Score =  243 bits (619), Expect = 2e-72
 Identities = 134/281 (47%), Positives = 170/281 (60%), Gaps = 10/281 (3%)
 Frame = -3

Query: 983 DPDVIRAKIMAHVHYPRLLTAYLECQKIGAPPSVLSELETLHQN--KCQRRQYMSTISIG 810
           D + ++AKI+AH HY  LL AYL+CQKIGAPP V+ ++    Q     Q+R   S  ++ 
Sbjct: 89  DMESMKAKIIAHPHYSTLLHAYLDCQKIGAPPEVVDKITAATQEFEARQQRPTASVTALS 148

Query: 809 VDPELDQFMEAYCELFVKYKEELTRPFKEATEFLKKVEMQLSAITKDHEPLKSLXXXXXX 630
            DPELDQFMEAYC++ VKY+EELTRP +EA E+++++E Q+S + +   P+  L      
Sbjct: 149 RDPELDQFMEAYCDMLVKYREELTRPIEEAMEYIRRIESQISMLCQG--PIHIL------ 200

Query: 629 XXXXXXXXXXXXXXXXDAMESIHRHTHGHGHG--------NPLAEDRALKEQLLRKYSGY 474
                           + MES       +  G        +P AEDR LK  LL+KYSGY
Sbjct: 201 ---------NNPDGKSEGMESSDEEQDNNNSGGEAELPEIDPRAEDRELKNHLLKKYSGY 251

Query: 473 LSGXXXXXXXXXXXXXXXKEARQKLLDWWTSHYKWPYPSEAQKIALAEATGLDQKQINNW 294
           LS                KEARQKLL WW  HYKWPYPSE++K+ALAE+TGLDQKQINNW
Sbjct: 252 LSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNW 311

Query: 293 FINQRKRHWKPSEEMQFVVMETPATRHHPHPHIFHLAPDGN 171
           FINQRKRHWKPSE+MQF+VM+        HPH   L  DG+
Sbjct: 312 FINQRKRHWKPSEDMQFMVMD-----GLQHPHHAALYMDGH 347


>XP_009134081.1 PREDICTED: homeobox protein knotted-1-like 1 isoform X1 [Brassica
           rapa] XP_013680900.1 PREDICTED: homeobox protein
           knotted-1-like 1 isoform X1 [Brassica napus]
          Length = 387

 Score =  243 bits (621), Expect = 2e-72
 Identities = 134/281 (47%), Positives = 170/281 (60%), Gaps = 10/281 (3%)
 Frame = -3

Query: 983 DPDVIRAKIMAHVHYPRLLTAYLECQKIGAPPSVLSELETLHQN--KCQRRQYMSTISIG 810
           D + ++AKI+AH HY  LL AYL+CQKIGAPP V+ ++    Q     Q+R   S  ++ 
Sbjct: 118 DMESMKAKIIAHPHYSTLLHAYLDCQKIGAPPEVVDKITAARQEFEARQQRPTASVTALS 177

Query: 809 VDPELDQFMEAYCELFVKYKEELTRPFKEATEFLKKVEMQLSAITKDHEPLKSLXXXXXX 630
            DPELDQFMEAYC++ VKY+EELTRP +EA E+++++E Q+S + +   P+  L      
Sbjct: 178 RDPELDQFMEAYCDMLVKYREELTRPIEEAMEYIRRIESQISMLCQG--PIHIL------ 229

Query: 629 XXXXXXXXXXXXXXXXDAMESIHRHTHGHGHG--------NPLAEDRALKEQLLRKYSGY 474
                           + MES       +  G        +P AEDR LK  LL+KYSGY
Sbjct: 230 ---------NNPDGKSEGMESSDEEQDNNNSGGEAELPEIDPRAEDRELKNHLLKKYSGY 280

Query: 473 LSGXXXXXXXXXXXXXXXKEARQKLLDWWTSHYKWPYPSEAQKIALAEATGLDQKQINNW 294
           LS                KEARQKLL WW  HYKWPYPSE++K+ALAE+TGLDQKQINNW
Sbjct: 281 LSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNW 340

Query: 293 FINQRKRHWKPSEEMQFVVMETPATRHHPHPHIFHLAPDGN 171
           FINQRKRHWKPSE+MQF+VM+        HPH   L  DG+
Sbjct: 341 FINQRKRHWKPSEDMQFMVMD-----GLQHPHHAALYMDGH 376


>BAJ10713.1 shoot meristemless ortholog [Weddellina squamulosa]
          Length = 356

 Score =  241 bits (616), Expect = 4e-72
 Identities = 134/275 (48%), Positives = 162/275 (58%), Gaps = 7/275 (2%)
 Frame = -3

Query: 971 IRAKIMAHVHYPRLLTAYLECQKIGAPPSVLSELETLHQNKCQRRQYMSTISIGVDPELD 792
           I+AKIM+H HY RLL+AY+ CQK+GAPP V++ LE             +   IG DP LD
Sbjct: 102 IKAKIMSHPHYTRLLSAYVNCQKVGAPPEVVARLEEARAAAAAAALGPAGGCIGQDPALD 161

Query: 791 QFMEAYCELFVKYKEELTRPFKEATEFLKKVEMQLSAITKDHEPLKSLXXXXXXXXXXXX 612
           QFMEAYCE+  KY++EL++P KEA  FL++VE Q  A+T                     
Sbjct: 162 QFMEAYCEMLTKYEQELSKPLKEAMLFLQRVEFQFKALTLSSP----------------- 204

Query: 611 XXXXXXXXXXDAMESIHRHTHGH--GHGN-----PLAEDRALKEQLLRKYSGYLSGXXXX 453
                      + E+  R+      G GN     P AEDR LK QLLR+YSGYL      
Sbjct: 205 -------CSGYSGEANERNASSEEEGDGNNVFIDPQAEDRELKGQLLRRYSGYLGSLKQE 257

Query: 452 XXXXXXXXXXXKEARQKLLDWWTSHYKWPYPSEAQKIALAEATGLDQKQINNWFINQRKR 273
                      KEARQ+LLDWW+ HYKWPYPSE+QK+ALAE+TGLDQKQINNWFINQRKR
Sbjct: 258 FMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKR 317

Query: 272 HWKPSEEMQFVVMETPATRHHPHPHIFHLAPDGNP 168
           HWKPSE+MQFVVM+        HPH +     GNP
Sbjct: 318 HWKPSEDMQFVVMDA------AHPHYYMDNVLGNP 346


>XP_002874518.1 hypothetical protein ARALYDRAFT_489727 [Arabidopsis lyrata subsp.
           lyrata] EFH50777.1 hypothetical protein
           ARALYDRAFT_489727 [Arabidopsis lyrata subsp. lyrata]
          Length = 395

 Score =  242 bits (617), Expect = 9e-72
 Identities = 135/278 (48%), Positives = 169/278 (60%), Gaps = 7/278 (2%)
 Frame = -3

Query: 983 DPDVIRAKIMAHVHYPRLLTAYLECQKIGAPPSVLSELETLHQNKCQRRQYMSTISIGV- 807
           D + ++AKI+AH HY  LL AYL+CQKIGAPP V+  +    Q+  + RQ   T S+   
Sbjct: 126 DVEAMKAKIIAHPHYSTLLQAYLDCQKIGAPPEVVDRITAARQD-FEARQQRPTPSVSAS 184

Query: 806 --DPELDQFMEAYCELFVKYKEELTRPFKEATEFLKKVEMQLSAITKDHEPLKSLXXXXX 633
             DPELDQFMEAYC++ VKY+EELTRP +EA EF++++E QLS + +   P+  L     
Sbjct: 185 SRDPELDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQ--SPIHIL----- 237

Query: 632 XXXXXXXXXXXXXXXXXDAMESIHRHTHGH----GHGNPLAEDRALKEQLLRKYSGYLSG 465
                             + +    +T G        +P AEDR LK  LL+KYSGYLS 
Sbjct: 238 ------NNPADGKSEGMGSSDEEQENTSGGETELPEIDPRAEDRELKNHLLKKYSGYLSS 291

Query: 464 XXXXXXXXXXXXXXXKEARQKLLDWWTSHYKWPYPSEAQKIALAEATGLDQKQINNWFIN 285
                          KEARQKLL WW  HYKWPYPSE++K+ALAE+TGLDQKQINNWFIN
Sbjct: 292 LKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFIN 351

Query: 284 QRKRHWKPSEEMQFVVMETPATRHHPHPHIFHLAPDGN 171
           QRKRHWKPSE+MQF+VM+        HPH   L  DG+
Sbjct: 352 QRKRHWKPSEDMQFMVMD-----GLQHPHHAALYMDGH 384


>ACS28249.1 BREVIPEDICELLUS, partial [Brassica rapa]
          Length = 383

 Score =  241 bits (615), Expect = 1e-71
 Identities = 133/281 (47%), Positives = 169/281 (60%), Gaps = 10/281 (3%)
 Frame = -3

Query: 983 DPDVIRAKIMAHVHYPRLLTAYLECQKIGAPPSVLSELETLHQN--KCQRRQYMSTISIG 810
           D + ++AKI+AH HY  LL AYL+CQKIGAPP V+ ++    Q     Q+R   S  ++ 
Sbjct: 114 DMESMKAKIIAHPHYSTLLHAYLDCQKIGAPPEVVDKITAARQEFEARQQRPTASVTALS 173

Query: 809 VDPELDQFMEAYCELFVKYKEELTRPFKEATEFLKKVEMQLSAITKDHEPLKSLXXXXXX 630
            DPELDQFMEAYC++ VKY+EELTRP +EA E+++++E Q+S + +   P+  L      
Sbjct: 174 RDPELDQFMEAYCDMLVKYREELTRPIEEAMEYIRRIESQISMLCQG--PIHIL------ 225

Query: 629 XXXXXXXXXXXXXXXXDAMESIHRHTHGHGHG--------NPLAEDRALKEQLLRKYSGY 474
                           + MES       +  G        +P AEDR LK  LL+KYSGY
Sbjct: 226 ---------NNPDGKSEGMESSDEEQDNNNSGGEAELPEIDPRAEDRELKNHLLKKYSGY 276

Query: 473 LSGXXXXXXXXXXXXXXXKEARQKLLDWWTSHYKWPYPSEAQKIALAEATGLDQKQINNW 294
           LS                KEARQKLL WW  HYKWPYPSE++K+A AE+TGLDQKQINNW
Sbjct: 277 LSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVASAESTGLDQKQINNW 336

Query: 293 FINQRKRHWKPSEEMQFVVMETPATRHHPHPHIFHLAPDGN 171
           FINQRKRHWKPSE+MQF+VM+        HPH   L  DG+
Sbjct: 337 FINQRKRHWKPSEDMQFMVMD-----GLQHPHHAALYMDGH 372


>ONK70249.1 uncharacterized protein A4U43_C05F31790 [Asparagus officinalis]
          Length = 592

 Score =  246 bits (627), Expect = 4e-71
 Identities = 134/299 (44%), Positives = 173/299 (57%), Gaps = 3/299 (1%)
 Frame = -3

Query: 1049 PPLVVTPALAHSTGKSLHIQEEDPDVIRAKIMAHVHYPRLLTAYLECQKIGAPPSVLSEL 870
            PPL++ P   H    +   ++ D  +I+AKIM+H HYP+LL+AY+ CQK+GAPP V++ L
Sbjct: 306  PPLLLPPPSTHQANNNG--EDFDSSLIKAKIMSHPHYPKLLSAYINCQKVGAPPEVVARL 363

Query: 869  ETLHQNKC---QRRQYMSTISIGVDPELDQFMEAYCELFVKYKEELTRPFKEATEFLKKV 699
            E    +     +     S+ S+  DP LDQFMEAYCE+  KY++EL++PFKEA  FL ++
Sbjct: 364  EEACSSSLMIGRAASSSSSASVEGDPALDQFMEAYCEMLTKYEQELSKPFKEAMLFLSRI 423

Query: 698  EMQLSAITKDHEPLKSLXXXXXXXXXXXXXXXXXXXXXXDAMESIHRHTHGHGHGNPLAE 519
            + Q  +++       SL                                    + +P AE
Sbjct: 424  DAQFKSLSLSSSSTSSLNPVCGDMERNASSDEDVDVC--------------ENYVDPHAE 469

Query: 518  DRALKEQLLRKYSGYLSGXXXXXXXXXXXXXXXKEARQKLLDWWTSHYKWPYPSEAQKIA 339
            DR LK QLLRKYSGYL                 KEARQ+LLDWW  HYKWPYPSE+QK+A
Sbjct: 470  DRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWNRHYKWPYPSESQKLA 529

Query: 338  LAEATGLDQKQINNWFINQRKRHWKPSEEMQFVVMETPATRHHPHPHIFHLAPDGNPHQ 162
            LAE+TGLDQKQINNWFINQRKRHWKPSEE+Q  V+   A+    HPH F     GN +Q
Sbjct: 530  LAESTGLDQKQINNWFINQRKRHWKPSEEIQTYVVMGDAS----HPHYFLDNGFGNAYQ 584


>XP_018475926.1 PREDICTED: homeobox protein knotted-1-like 1 isoform X1 [Raphanus
           sativus]
          Length = 392

 Score =  240 bits (612), Expect = 5e-71
 Identities = 134/285 (47%), Positives = 171/285 (60%), Gaps = 14/285 (4%)
 Frame = -3

Query: 983 DPDVIRAKIMAHVHYPRLLTAYLECQK----IGAPPSVLSELETLHQN--KCQRRQYMST 822
           D + ++AKI+AH HYP LL AYL+CQK    IGAPP V+ ++    +     Q+R   S 
Sbjct: 119 DTESMKAKIIAHPHYPTLLHAYLDCQKWPIQIGAPPEVVDKITAARKEFETRQQRPIASV 178

Query: 821 ISIGVDPELDQFMEAYCELFVKYKEELTRPFKEATEFLKKVEMQLSAITKDHEPLKSLXX 642
            ++  DPELDQFMEAYC++ VKY+EELTRP +EA E+++++E Q+S + +   P+  L  
Sbjct: 179 TALSRDPELDQFMEAYCDMLVKYQEELTRPIEEAMEYIRRIESQISMLCQG--PIHIL-- 234

Query: 641 XXXXXXXXXXXXXXXXXXXXDAMESIHRHTHGHGHG--------NPLAEDRALKEQLLRK 486
                               + MES       +  G        +P AEDR LK  LL+K
Sbjct: 235 -------------NNPDGKSEGMESSDEEQENNNSGGEAELPEIDPRAEDRELKNHLLKK 281

Query: 485 YSGYLSGXXXXXXXXXXXXXXXKEARQKLLDWWTSHYKWPYPSEAQKIALAEATGLDQKQ 306
           YSGYLS                KEARQKLL WW  HYKWPYPSE++K+ALAE+TGLDQKQ
Sbjct: 282 YSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQ 341

Query: 305 INNWFINQRKRHWKPSEEMQFVVMETPATRHHPHPHIFHLAPDGN 171
           INNWFINQRKRHWKPSE+MQF+VM+        HPH   L  DG+
Sbjct: 342 INNWFINQRKRHWKPSEDMQFMVMD-----GLQHPHHAALYMDGH 381


>ABO33479.1 class I KNOX homeobox transcription factor, partial [Medicago
           truncatula]
          Length = 288

 Score =  233 bits (594), Expect = 1e-69
 Identities = 122/252 (48%), Positives = 160/252 (63%), Gaps = 1/252 (0%)
 Frame = -3

Query: 983 DPDVIRAKIMAHVHYPRLLTAYLECQKIGAPPSVLSELETLHQN-KCQRRQYMSTISIGV 807
           + + I+AKI+AH  Y  LL AY++CQKIGAPP V++ L    Q  + ++R  +++     
Sbjct: 24  EAEAIKAKIIAHPQYSSLLQAYMDCQKIGAPPEVVARLVASRQEFEARQRSSVNSRETSK 83

Query: 806 DPELDQFMEAYCELFVKYKEELTRPFKEATEFLKKVEMQLSAITKDHEPLKSLXXXXXXX 627
           DPELDQFMEAY ++ VKY+EELTRP +EA +F++++E QL+ +   + PL+         
Sbjct: 84  DPELDQFMEAYYDMLVKYREELTRPIQEAMDFMRRIETQLNTLC--NGPLRIFPDDKNEG 141

Query: 626 XXXXXXXXXXXXXXXDAMESIHRHTHGHGHGNPLAEDRALKEQLLRKYSGYLSGXXXXXX 447
                          D +  I          +P AEDR LK  LL+KYSGYLS       
Sbjct: 142 VGSSEEDQENSGGETDQLPEI----------DPRAEDRELKNHLLKKYSGYLSSLKQELS 191

Query: 446 XXXXXXXXXKEARQKLLDWWTSHYKWPYPSEAQKIALAEATGLDQKQINNWFINQRKRHW 267
                    KEARQKLL+WW  HYKWPYPSE++K+ALAE+TGLDQKQINNWFINQRKRHW
Sbjct: 192 KKKKKGKLPKEARQKLLNWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHW 251

Query: 266 KPSEEMQFVVME 231
           KPSE+MQF+VM+
Sbjct: 252 KPSEDMQFMVMD 263


>GAU26942.1 hypothetical protein TSUD_06150 [Trifolium subterraneum]
          Length = 271

 Score =  232 bits (592), Expect = 1e-69
 Identities = 122/252 (48%), Positives = 159/252 (63%), Gaps = 1/252 (0%)
 Frame = -3

Query: 983 DPDVIRAKIMAHVHYPRLLTAYLECQKIGAPPSVLSELETLHQN-KCQRRQYMSTISIGV 807
           + + I+AKI+AH  Y  LL AY++CQK+GAPP V++ L    Q  + ++R  +++     
Sbjct: 16  EAEAIKAKIIAHPQYSSLLQAYMDCQKVGAPPDVVARLVAARQEFEARQRSSVNSRENSK 75

Query: 806 DPELDQFMEAYCELFVKYKEELTRPFKEATEFLKKVEMQLSAITKDHEPLKSLXXXXXXX 627
           DPELDQFMEAY ++ VKY+EELTRP +EA +F+K++E QL+ +   + PL+         
Sbjct: 76  DPELDQFMEAYYDMLVKYREELTRPIQEAMDFMKRIETQLNTLC--NGPLRIFPGGAGSS 133

Query: 626 XXXXXXXXXXXXXXXDAMESIHRHTHGHGHGNPLAEDRALKEQLLRKYSGYLSGXXXXXX 447
                             E+    T      +P AEDR LK  LL+KYSGYLS       
Sbjct: 134 EED--------------QENSGGETDQLPEIDPRAEDRELKNHLLKKYSGYLSSLKQELS 179

Query: 446 XXXXXXXXXKEARQKLLDWWTSHYKWPYPSEAQKIALAEATGLDQKQINNWFINQRKRHW 267
                    KEARQKLL WW  HYKWPYPSE++K+ALAE+TGLDQKQINNWFINQRKRHW
Sbjct: 180 KKKKKGKLPKEARQKLLSWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHW 239

Query: 266 KPSEEMQFVVME 231
           KPSE+MQF+VM+
Sbjct: 240 KPSEDMQFMVMD 251