BLASTX nr result
ID: Ephedra29_contig00016635
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00016635
(793 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ONK67125.1 uncharacterized protein A4U43_C06F15970 [Asparagus of... 82 5e-14
AJA90762.1 RNA-dependent RNA polymerase 2 [Cycas revoluta] 81 1e-13
XP_012072321.1 PREDICTED: RNA-dependent RNA polymerase 1-like is... 80 3e-13
XP_012072320.1 PREDICTED: RNA-dependent RNA polymerase 1-like is... 80 3e-13
ACH53360.1 RNA-directed RNA polymerase 1a, partial [Hordeum vulg... 77 3e-12
AAR91037.1 RNA-directed RNA polymerase 2 [Hordeum vulgare subsp.... 77 3e-12
XP_011625384.1 PREDICTED: probable RNA-dependent RNA polymerase ... 77 3e-12
ERN11375.1 hypothetical protein AMTR_s00176p00039530 [Amborella ... 77 3e-12
XP_020089659.1 probable RNA-dependent RNA polymerase 1 [Ananas c... 76 5e-12
XP_020089657.1 probable RNA-dependent RNA polymerase 1 isoform X... 76 7e-12
KDP38127.1 hypothetical protein JCGZ_04770 [Jatropha curcas] 72 8e-12
XP_020089658.1 probable RNA-dependent RNA polymerase 1 isoform X... 75 9e-12
XP_017970690.1 PREDICTED: RNA-dependent RNA polymerase 1 [Theobr... 75 1e-11
EOY01384.1 RNA-dependent RNA polymerase 1 isoform 1 [Theobroma c... 74 2e-11
OAY79234.1 RNA-dependent RNA polymerase 1, partial [Ananas comosus] 74 2e-11
XP_010236147.1 PREDICTED: LOW QUALITY PROTEIN: probable RNA-depe... 74 3e-11
OAY29319.1 hypothetical protein MANES_15G135600 [Manihot esculenta] 74 3e-11
AJA90778.1 RNA-dependent RNA polymerase 2 [Ginkgo biloba] 73 5e-11
XP_010093320.1 RNA-dependent RNA polymerase 1 [Morus notabilis] ... 73 5e-11
XP_009381445.1 PREDICTED: probable RNA-dependent RNA polymerase ... 73 7e-11
>ONK67125.1 uncharacterized protein A4U43_C06F15970 [Asparagus officinalis]
Length = 1128
Score = 82.0 bits (201), Expect = 5e-14
Identities = 60/191 (31%), Positives = 102/191 (53%), Gaps = 4/191 (2%)
Frame = +2
Query: 230 SRTVKITNVPANTDPLKLKDFLESLVDEKGCVYACKVLPTKNPRHETTQ----AIVQFER 397
S+TV ++ P N +K+FLE E G V+A KV ++P+ +T+ A+VQF
Sbjct: 3 SKTVHVSGFPMNVTADSVKNFLEDYTGE-GSVFAVKV---RHPKVISTRSRAYALVQFFT 58
Query: 398 KLVAQKLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRAPVEVATTRVYLGCQ 577
A+ + +++ LY +S+ L V+ +RD+V +PR+A + T +++GC
Sbjct: 59 SKDAKIVSSLAQQNF-------LYGNSY-LKVEYAKRDIVPKPRKAWFILEDTELHIGCL 110
Query: 578 VNHNEYCVLWSSTGHVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQRMHHYGSASRGT 757
++ N VLWS TG V+ NMKK+ +LT + L SF SI + + S +
Sbjct: 111 ISENTLGVLWSCTG-VEVHFGFNMKKISFLLTQGSQSHKLELSFESIWDIQQHSLPSENS 169
Query: 758 KYLVMPLYSAP 790
++LV+ + +AP
Sbjct: 170 QFLVVQVQAAP 180
>AJA90762.1 RNA-dependent RNA polymerase 2 [Cycas revoluta]
Length = 1117
Score = 80.9 bits (198), Expect = 1e-13
Identities = 59/185 (31%), Positives = 92/185 (49%)
Frame = +2
Query: 236 TVKITNVPANTDPLKLKDFLESLVDEKGCVYACKVLPTKNPRHETTQAIVQFERKLVAQK 415
TV+++N+P +L F+E ++ K CVYAC++ + VQFE A +
Sbjct: 5 TVRVSNIPLTAVAKELVSFVERIIG-KDCVYACEIKTERMNWKSRGFGRVQFENGDAAVE 63
Query: 416 LCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRAPVEVATTRVYLGCQVNHNEY 595
C +S+ L LL K S L V + D++ RP V R+++GC V H+ +
Sbjct: 64 ACKLSQSGL-----LLFQKAS--LVVCSIHNDIIPRPMCRENSVPGGRLHVGCPVYHDAF 116
Query: 596 CVLWSSTGHVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYLVMP 775
VLWSST +V E +K+ L++ G++Y L F I + H R TK +++
Sbjct: 117 YVLWSST-NVVAEFVPEREKLNFFLSEGGMEYKLEVFFQDIIQTHACTLQGRRTKAILLQ 175
Query: 776 LYSAP 790
L SAP
Sbjct: 176 LQSAP 180
>XP_012072321.1 PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Jatropha
curcas] XP_012072322.1 PREDICTED: RNA-dependent RNA
polymerase 1-like isoform X2 [Jatropha curcas]
XP_012072324.1 PREDICTED: RNA-dependent RNA polymerase
1-like isoform X2 [Jatropha curcas]
Length = 1127
Score = 79.7 bits (195), Expect = 3e-13
Identities = 54/186 (29%), Positives = 93/186 (50%)
Frame = +2
Query: 233 RTVKITNVPANTDPLKLKDFLESLVDEKGCVYACKVLPTKNPRHETTQAIVQFERKLVAQ 412
+T+++ P++ ++K FLES E G V+A K+ TKN R AIVQF+ A+
Sbjct: 3 KTIQVYGFPSHVTVDEVKKFLESHSGE-GTVFAMKIRETKN-RGRRKYAIVQFQTARDAE 60
Query: 413 KLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRAPVEVATTRVYLGCQVNHNE 592
+ ++ L Y + L PL+ D+V +PR + ++ GCQ++ +
Sbjct: 61 LIISLTNKRLRY--------GTSYLKARPLDNDIVPKPRTFLHSMDHITLHFGCQISKEK 112
Query: 593 YCVLWSSTGHVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYLVM 772
+ VLW+ T +V M+K+ L+ + Y L S+ ++ +M + R KYL++
Sbjct: 113 FSVLWTGT-NVSVNFGFGMRKLQFFLSHGQMGYKLELSYENVWQMELHCPRGRSVKYLLI 171
Query: 773 PLYSAP 790
LY AP
Sbjct: 172 QLYGAP 177
>XP_012072320.1 PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Jatropha
curcas]
Length = 1144
Score = 79.7 bits (195), Expect = 3e-13
Identities = 54/186 (29%), Positives = 93/186 (50%)
Frame = +2
Query: 233 RTVKITNVPANTDPLKLKDFLESLVDEKGCVYACKVLPTKNPRHETTQAIVQFERKLVAQ 412
+T+++ P++ ++K FLES E G V+A K+ TKN R AIVQF+ A+
Sbjct: 20 KTIQVYGFPSHVTVDEVKKFLESHSGE-GTVFAMKIRETKN-RGRRKYAIVQFQTARDAE 77
Query: 413 KLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRAPVEVATTRVYLGCQVNHNE 592
+ ++ L Y + L PL+ D+V +PR + ++ GCQ++ +
Sbjct: 78 LIISLTNKRLRY--------GTSYLKARPLDNDIVPKPRTFLHSMDHITLHFGCQISKEK 129
Query: 593 YCVLWSSTGHVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYLVM 772
+ VLW+ T +V M+K+ L+ + Y L S+ ++ +M + R KYL++
Sbjct: 130 FSVLWTGT-NVSVNFGFGMRKLQFFLSHGQMGYKLELSYENVWQMELHCPRGRSVKYLLI 188
Query: 773 PLYSAP 790
LY AP
Sbjct: 189 QLYGAP 194
>ACH53360.1 RNA-directed RNA polymerase 1a, partial [Hordeum vulgare]
Length = 1114
Score = 77.0 bits (188), Expect = 3e-12
Identities = 59/187 (31%), Positives = 90/187 (48%), Gaps = 1/187 (0%)
Frame = +2
Query: 233 RTVKITNVPANTDPLKLKDFLESLVDEKGCVYACKVLPTKN-PRHETTQAIVQFERKLVA 409
+T++++ PA + +KD LE +V G V A K+ P KN + + AIVQFE + A
Sbjct: 4 KTLQVSGFPATVNVHHVKDLLEQIVG-LGKVCAVKLRPPKNISANSRSFAIVQFETEAHA 62
Query: 410 QKLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRAPVEVATTRVYLGCQVNHN 589
+ + L S+ L V P ERD++ +PR A + ++ GC +
Sbjct: 63 SLVVNAARGNA-------LRSGSNYLKVRPAERDIILKPRTALFNLEDATLHFGCLLRER 115
Query: 590 EYCVLWSSTGHVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYLV 769
VLWS TG V E MKK+ LT + KY L S+ SI + Y K+L+
Sbjct: 116 VLSVLWSGTG-VSVEFGFAMKKIDFCLTYNLKKYKLELSYESIWEIQLYHPPGSQKKFLL 174
Query: 770 MPLYSAP 790
+ + +AP
Sbjct: 175 IQVMAAP 181
>AAR91037.1 RNA-directed RNA polymerase 2 [Hordeum vulgare subsp. vulgare]
Length = 1115
Score = 77.0 bits (188), Expect = 3e-12
Identities = 59/187 (31%), Positives = 90/187 (48%), Gaps = 1/187 (0%)
Frame = +2
Query: 233 RTVKITNVPANTDPLKLKDFLESLVDEKGCVYACKVLPTKN-PRHETTQAIVQFERKLVA 409
+T++++ PA + +KD LE +V G V A K+ P KN + + AIVQFE + A
Sbjct: 4 KTLQVSGFPATVNVHHVKDLLEQIVG-LGKVCAVKLRPPKNISANSRSFAIVQFETEAHA 62
Query: 410 QKLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRAPVEVATTRVYLGCQVNHN 589
+ + L S+ L V P ERD++ +PR A + ++ GC +
Sbjct: 63 SLVVNAARGNA-------LRSGSNYLKVRPAERDIILKPRTALFNLEDATLHFGCLLRER 115
Query: 590 EYCVLWSSTGHVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYLV 769
VLWS TG V E MKK+ LT + KY L S+ SI + Y K+L+
Sbjct: 116 VLSVLWSGTG-VSVEFGFAMKKIDFCLTYNLKKYKLELSYESIWEIQLYHPPGSQKKFLL 174
Query: 770 MPLYSAP 790
+ + +AP
Sbjct: 175 IQVMAAP 181
>XP_011625384.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Amborella
trichopoda]
Length = 1140
Score = 77.0 bits (188), Expect = 3e-12
Identities = 54/186 (29%), Positives = 94/186 (50%)
Frame = +2
Query: 233 RTVKITNVPANTDPLKLKDFLESLVDEKGCVYACKVLPTKNPRHETTQAIVQFERKLVAQ 412
RTV+++ P T +K FLES+ G VY K+ K+ + AIVQF A+
Sbjct: 6 RTVQVSGFPQGTCAEAVKKFLESITGF-GTVYHLKIRIHKSKPNSRVFAIVQFTTSKSAE 64
Query: 413 KLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRAPVEVATTRVYLGCQVNHNE 592
+ ++ + L + +S+V+ V +E D+V PR + + ++Y G Q++
Sbjct: 65 VIYSLAPQPKS-----LYFGNSYVI-VRYMENDIVPNPRVTYHVLESIQLYFGNQISEES 118
Query: 593 YCVLWSSTGHVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYLVM 772
+ +LWS+T +V E +KK+F L G+ Y L + +I ++ + GT+YLV+
Sbjct: 119 FAILWSNT-NVKVEFGFGLKKIFFYLAHTGVDYKLDLYYENIWQIQLRRPGTEGTRYLVL 177
Query: 773 PLYSAP 790
+ AP
Sbjct: 178 QMQGAP 183
>ERN11375.1 hypothetical protein AMTR_s00176p00039530 [Amborella trichopoda]
Length = 1210
Score = 77.0 bits (188), Expect = 3e-12
Identities = 54/186 (29%), Positives = 94/186 (50%)
Frame = +2
Query: 233 RTVKITNVPANTDPLKLKDFLESLVDEKGCVYACKVLPTKNPRHETTQAIVQFERKLVAQ 412
RTV+++ P T +K FLES+ G VY K+ K+ + AIVQF A+
Sbjct: 76 RTVQVSGFPQGTCAEAVKKFLESITGF-GTVYHLKIRIHKSKPNSRVFAIVQFTTSKSAE 134
Query: 413 KLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRAPVEVATTRVYLGCQVNHNE 592
+ ++ + L + +S+V+ V +E D+V PR + + ++Y G Q++
Sbjct: 135 VIYSLAPQPKS-----LYFGNSYVI-VRYMENDIVPNPRVTYHVLESIQLYFGNQISEES 188
Query: 593 YCVLWSSTGHVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYLVM 772
+ +LWS+T +V E +KK+F L G+ Y L + +I ++ + GT+YLV+
Sbjct: 189 FAILWSNT-NVKVEFGFGLKKIFFYLAHTGVDYKLDLYYENIWQIQLRRPGTEGTRYLVL 247
Query: 773 PLYSAP 790
+ AP
Sbjct: 248 QMQGAP 253
>XP_020089659.1 probable RNA-dependent RNA polymerase 1 [Ananas comosus]
XP_020089661.1 probable RNA-dependent RNA polymerase 1
[Ananas comosus]
Length = 1133
Score = 76.3 bits (186), Expect = 5e-12
Identities = 52/188 (27%), Positives = 96/188 (51%), Gaps = 2/188 (1%)
Frame = +2
Query: 233 RTVKITNVPANTDPLKLKDFLESLVDEKGCVYACKVL-PTKNPRHETTQAIVQFERKLVA 409
+TV I P + K+ LE + + G VYA K+ P + A+VQF + A
Sbjct: 4 KTVNIHGFPLHASADYAKNILEGFISD-GSVYALKLRQPKVTTGKSRSYAVVQFLTEGQA 62
Query: 410 QKLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRAPVEVATTRVYLGCQVNHN 589
+++ +++ L L + L +ERD+V +PR + V ++ GC V+
Sbjct: 63 KQIIYLADNSL-------LRCQGYYLKARYMERDIVPKPRSSLFVVERATLHFGCPVSKR 115
Query: 590 EYCVLWSSTG-HVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYL 766
+CVLWS++ HV+F N++K++ L+ +Y L S+ SI + + S+ +G+++L
Sbjct: 116 SFCVLWSASDVHVNFGF--NLRKIYFFLSKGSFEYKLELSYESIWEIQLHRSSDQGSQFL 173
Query: 767 VMPLYSAP 790
+ + +AP
Sbjct: 174 LFQMAAAP 181
>XP_020089657.1 probable RNA-dependent RNA polymerase 1 isoform X1 [Ananas comosus]
Length = 1147
Score = 75.9 bits (185), Expect = 7e-12
Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 1/191 (0%)
Frame = +2
Query: 221 VCRSRTVKITNVPANTDPLKLKDFLESLVDEKGCVYACKVL-PTKNPRHETTQAIVQFER 397
V +TV I P + KD LE + + G VYA K+ P + + A+VQF
Sbjct: 14 VMGGKTVNIHGFPLHASVDYAKDILEGFIGD-GSVYALKLRQPAVTTQKSRSYAVVQFLT 72
Query: 398 KLVAQKLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRAPVEVATTRVYLGCQ 577
+ A+++ +++ L L + L V ++RD+V +PR + V ++ GC
Sbjct: 73 EGQAKRIIYLADNSL-------LMCQGYYLKVRYMKRDIVPKPRASLFVVEHATLHFGCP 125
Query: 578 VNHNEYCVLWSSTGHVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQRMHHYGSASRGT 757
V +CVLWS++ V N++K++ ++ KY L S+ SI + + S+ +G+
Sbjct: 126 VLKRSFCVLWSAS-DVRVNFGFNLRKIYFFVSQGSFKYKLELSYESIWEIQLHRSSDQGS 184
Query: 758 KYLVMPLYSAP 790
++L+ + +AP
Sbjct: 185 QFLLFQMAAAP 195
>KDP38127.1 hypothetical protein JCGZ_04770 [Jatropha curcas]
Length = 196
Score = 72.4 bits (176), Expect = 8e-12
Identities = 51/184 (27%), Positives = 91/184 (49%)
Frame = +2
Query: 233 RTVKITNVPANTDPLKLKDFLESLVDEKGCVYACKVLPTKNPRHETTQAIVQFERKLVAQ 412
+T+++ P++ ++K FLES E G V+A K+ TKN R AIVQF+ A+
Sbjct: 20 KTIQVYGFPSHVTVDEVKKFLESHSGE-GTVFAMKIRETKN-RGRRKYAIVQFQTARDAE 77
Query: 413 KLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRAPVEVATTRVYLGCQVNHNE 592
+ ++ L Y + L PL+ D+V +PR + ++ GCQ++ +
Sbjct: 78 LIISLTNKRLRY--------GTSYLKARPLDNDIVPKPRTFLHSMDHITLHFGCQISKEK 129
Query: 593 YCVLWSSTGHVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYLVM 772
+ VLW+ T +V M+K+ L+ + Y L S+ ++ +M + R KYL++
Sbjct: 130 FSVLWTGT-NVSVNFGFGMRKLQFFLSHGQMGYKLELSYENVWQMELHCPRGRSVKYLLI 188
Query: 773 PLYS 784
+ S
Sbjct: 189 QVSS 192
>XP_020089658.1 probable RNA-dependent RNA polymerase 1 isoform X2 [Ananas comosus]
Length = 1133
Score = 75.5 bits (184), Expect = 9e-12
Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 1/187 (0%)
Frame = +2
Query: 233 RTVKITNVPANTDPLKLKDFLESLVDEKGCVYACKVL-PTKNPRHETTQAIVQFERKLVA 409
+TV I P + KD LE + + G VYA K+ P + + A+VQF + A
Sbjct: 4 KTVNIHGFPLHASVDYAKDILEGFIGD-GSVYALKLRQPAVTTQKSRSYAVVQFLTEGQA 62
Query: 410 QKLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRAPVEVATTRVYLGCQVNHN 589
+++ +++ L L + L V ++RD+V +PR + V ++ GC V
Sbjct: 63 KRIIYLADNSL-------LMCQGYYLKVRYMKRDIVPKPRASLFVVEHATLHFGCPVLKR 115
Query: 590 EYCVLWSSTGHVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYLV 769
+CVLWS++ V N++K++ ++ KY L S+ SI + + S+ +G+++L+
Sbjct: 116 SFCVLWSAS-DVRVNFGFNLRKIYFFVSQGSFKYKLELSYESIWEIQLHRSSDQGSQFLL 174
Query: 770 MPLYSAP 790
+ +AP
Sbjct: 175 FQMAAAP 181
>XP_017970690.1 PREDICTED: RNA-dependent RNA polymerase 1 [Theobroma cacao]
XP_007045552.2 PREDICTED: RNA-dependent RNA polymerase 1
[Theobroma cacao]
Length = 1109
Score = 75.1 bits (183), Expect = 1e-11
Identities = 51/186 (27%), Positives = 92/186 (49%)
Frame = +2
Query: 233 RTVKITNVPANTDPLKLKDFLESLVDEKGCVYACKVLPTKNPRHETTQAIVQFERKLVAQ 412
+T++++ P+N ++K FLES K VYA K+ KN AIVQF + A+
Sbjct: 3 KTIQVSRFPSNVHAEEVKTFLESYTG-KETVYALKIRQQKNGGR--AYAIVQFTKSTDAE 59
Query: 413 KLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRAPVEVATTRVYLGCQVNHNE 592
+ ++ L Y S L +E D+V +PR + ++ GCQV++ +
Sbjct: 60 LIIRLTNQRLYY--------GSSYLKAREMENDIVPKPRTFLHTMEGVTLHFGCQVSNEK 111
Query: 593 YCVLWSSTGHVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYLVM 772
+ VLW V M+K+ +L+ H ++Y L + +I ++ + ++ +KYL++
Sbjct: 112 FYVLWEEV-DVTVNFGMGMRKLQFLLSHHCVEYRLDLFYENIWQIELHRPRNQTSKYLLI 170
Query: 773 PLYSAP 790
L+ AP
Sbjct: 171 QLFGAP 176
>EOY01384.1 RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
EOY01385.1 RNA-dependent RNA polymerase 1 isoform 1
[Theobroma cacao] EOY01386.1 RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
Length = 1109
Score = 74.3 bits (181), Expect = 2e-11
Identities = 51/186 (27%), Positives = 92/186 (49%)
Frame = +2
Query: 233 RTVKITNVPANTDPLKLKDFLESLVDEKGCVYACKVLPTKNPRHETTQAIVQFERKLVAQ 412
+T++++ P+N ++K FLE L K VYA K+ KN AIVQF + A+
Sbjct: 3 KTIQVSRFPSNVHAEEVKTFLE-LYTGKETVYALKIRQQKNGGR--AYAIVQFTKSTDAE 59
Query: 413 KLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRAPVEVATTRVYLGCQVNHNE 592
+ ++ L Y S L +E D+V +PR + ++ GCQV++ +
Sbjct: 60 LIIRLTNQRLYY--------GSSYLKAREMENDIVPKPRTFLHTMEGVTLHFGCQVSNEK 111
Query: 593 YCVLWSSTGHVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYLVM 772
+ VLW V M+K+ +L+ H ++Y L + +I ++ + ++ +KYL++
Sbjct: 112 FYVLWEEV-DVTVNFGMGMRKLQFLLSHHCVEYRLDLFYENIWQIELHRPRNQTSKYLLI 170
Query: 773 PLYSAP 790
L+ AP
Sbjct: 171 QLFGAP 176
>OAY79234.1 RNA-dependent RNA polymerase 1, partial [Ananas comosus]
Length = 3431
Score = 74.3 bits (181), Expect = 2e-11
Identities = 51/187 (27%), Positives = 95/187 (50%), Gaps = 2/187 (1%)
Frame = +2
Query: 236 TVKITNVPANTDPLKLKDFLESLVDEKGCVYACKVL-PTKNPRHETTQAIVQFERKLVAQ 412
TV I P + K+ LE + + G +YA K+ P + A+VQF + A+
Sbjct: 2285 TVNIHGFPLHASADYAKNILEGFIGD-GSIYALKLRQPKVTTGKSKSYAVVQFLTEGQAK 2343
Query: 413 KLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRAPVEVATTRVYLGCQVNHNE 592
++ +++ LL + L +ERD+V +PR + V ++ GC V+
Sbjct: 2344 QIIYLADN-------CLLRCQGYYLKARYMERDIVPKPRSSLFVVERATLHFGCPVSKRS 2396
Query: 593 YCVLWSSTG-HVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYLV 769
+CVLWS++ HV+F N++K++ L+ +Y L S+ SI + + S+ +G+++L+
Sbjct: 2397 FCVLWSASDVHVNFGF--NLRKIYFFLSKGSFEYKLELSYESIWEIQLHRSSDQGSQFLL 2454
Query: 770 MPLYSAP 790
+ +AP
Sbjct: 2455 FQMAAAP 2461
Score = 73.9 bits (180), Expect = 3e-11
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 2/192 (1%)
Frame = +2
Query: 221 VCRSRTVKITNVPANTDPLKLKDFLESLVDEKGCVYACKVL-PTKNPRHETTQAIVQFER 397
V + V I P + LE + G VYA ++ P R A VQF R
Sbjct: 37 VMGGKMVNIYGFPLHATAYYAMKVLEGFIGG-GSVYALQLRQPIVTTRKSEAYASVQFVR 95
Query: 398 KLVAQKLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRAPVEVATTRVYLGCQ 577
+ A+ + +++ L L + L +ERD+V +PR + V T V+ GC
Sbjct: 96 EWQAELIVNMADNRL-------LRCQGYYLMAQYMERDIVPKPRSSLFVVERTIVHFGCP 148
Query: 578 VNHNEYCVLWSSTG-HVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQRMHHYGSASRG 754
V+ +CVLWS+ HV F N++K+++ + G++Y L S+ SI + + S+ +G
Sbjct: 149 VSKRSFCVLWSAYDVHVTFGF--NLRKLYLFFSMRGLEYKLELSYESIWEIQLHRSSYQG 206
Query: 755 TKYLVMPLYSAP 790
+++L++ + +AP
Sbjct: 207 SQFLLIQMAAAP 218
>XP_010236147.1 PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA
polymerase 1 [Brachypodium distachyon]
Length = 1117
Score = 73.9 bits (180), Expect = 3e-11
Identities = 61/189 (32%), Positives = 93/189 (49%), Gaps = 3/189 (1%)
Frame = +2
Query: 233 RTVKITNVPANTDPLKLKDFLESLVDEKGCVYACKVLPTKN-PRHETTQAIVQFERKLVA 409
+T++I+ PAN +KD LE +V G VYA K+ P KN + + AIVQF+ + A
Sbjct: 4 KTLQISGFPANVHADHVKDLLEQIVGA-GNVYAVKLRPPKNITANSRSFAIVQFQTEEYA 62
Query: 410 QKLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRAPVEVATTRVYLGCQVNHN 589
+ + + L +S+ L V P ERD+V RPR A + + C + N
Sbjct: 63 SLVENAAXRNV-------LSTESYYLKVRPAERDIVPRPRTAMFTLHGATLRFSCLLKEN 115
Query: 590 EYCVLWSSTGHVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQ--RMHHYGSASRGTKY 763
VLWS T V E +MKK++ L KY L S+ SI ++H + K+
Sbjct: 116 VLSVLWSGT-DVSVEFGFDMKKIYFYLECR--KYKLELSYESIWEIQLHRPPAYRSQKKF 172
Query: 764 LVMPLYSAP 790
L++ + +AP
Sbjct: 173 LLIQVEAAP 181
>OAY29319.1 hypothetical protein MANES_15G135600 [Manihot esculenta]
Length = 1132
Score = 73.9 bits (180), Expect = 3e-11
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 2/188 (1%)
Frame = +2
Query: 233 RTVKITNVPANTDPLKLKDFLESLVDEKGCVYACKVLPTKN--PRHETTQAIVQFERKLV 406
+TV++ P++ +K FLES E G +YA K+ TK PR AIVQF
Sbjct: 3 KTVQVYGFPSSVTADAVKSFLESHTGE-GTIYAIKIRDTKKGGPRK---YAIVQFMTVED 58
Query: 407 AQKLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRAPVEVATTRVYLGCQVNH 586
A+ + ++ L Y + L P++ D+V +PR + ++ G Q++
Sbjct: 59 AEHIIFLTTKRLWY--------GTSYLKARPMDLDIVPKPRTFFHSMEHITLHFGNQLSK 110
Query: 587 NEYCVLWSSTGHVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYL 766
+ VLW T V + M+K+ L+ HG++Y L S+ SI ++ + + KYL
Sbjct: 111 ENFYVLWKGTD-VLVNFGSGMRKLHFYLSHHGVEYKLDLSYESIWQIELHRPRGQSVKYL 169
Query: 767 VMPLYSAP 790
V+ LY AP
Sbjct: 170 VIQLYGAP 177
>AJA90778.1 RNA-dependent RNA polymerase 2 [Ginkgo biloba]
Length = 1114
Score = 73.2 bits (178), Expect = 5e-11
Identities = 51/187 (27%), Positives = 99/187 (52%)
Frame = +2
Query: 230 SRTVKITNVPANTDPLKLKDFLESLVDEKGCVYACKVLPTKNPRHETTQAIVQFERKLVA 409
S TV ++++P +LK+F E++V K VYAC++ ++ VQFE A
Sbjct: 3 SCTVHVSSIPLIVIAKELKEFFENIVG-KDSVYACEIKTQRSNWKSKGFGRVQFENTNAA 61
Query: 410 QKLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRAPVEVATTRVYLGCQVNHN 589
++C +S+ LL++++ ++ V + D++ RP V ++++GC+V ++
Sbjct: 62 TEVCKLSQSGAES----LLFQNARLI-VYSIHEDIIPRPMCRENCVRGGKLHVGCRVFYD 116
Query: 590 EYCVLWSSTGHVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYLV 769
+CVLWSS V E + KK+ +L+++G +Y L + I + + R T+ ++
Sbjct: 117 AFCVLWSS-NDVVVEFVSERKKLNFLLSENGRQYKLEVLYQDIVQTFAFIVKGRRTRGIL 175
Query: 770 MPLYSAP 790
+ + SAP
Sbjct: 176 LQMQSAP 182
>XP_010093320.1 RNA-dependent RNA polymerase 1 [Morus notabilis] EXB53859.1
RNA-dependent RNA polymerase 1 [Morus notabilis]
Length = 1133
Score = 73.2 bits (178), Expect = 5e-11
Identities = 48/186 (25%), Positives = 92/186 (49%)
Frame = +2
Query: 233 RTVKITNVPANTDPLKLKDFLESLVDEKGCVYACKVLPTKNPRHETTQAIVQFERKLVAQ 412
+T++++ P++ +K+FLE +G VYA K+ PTKN + AIVQF A+
Sbjct: 3 KTIQLSGFPSHVSAESVKEFLEGHTG-RGTVYAIKIRPTKNGGSRS-YAIVQFMTVETAE 60
Query: 413 KLCGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRAPVEVATTRVYLGCQVNHNE 592
+ ++ L Y LL + +ERD+V +PR + ++ GCQ++ +
Sbjct: 61 LIIRLANPRLWYGRSYLLAR--------VMERDIVPKPRATLYSLQNVTLHFGCQISKEK 112
Query: 593 YCVLWSSTGHVDFELCANMKKVFIVLTDHGIKYMLVSSFGSIQRMHHYGSASRGTKYLVM 772
+ LW G+V + ++++ LT ++Y L + ++ ++ + + KYL++
Sbjct: 113 FSFLW-RVGNVSVDFGLGLRRLNFYLTYGPVEYRLQLLYENVWQIELHRPRGQTAKYLLI 171
Query: 773 PLYSAP 790
L AP
Sbjct: 172 QLLGAP 177
>XP_009381445.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Musa acuminata
subsp. malaccensis]
Length = 1134
Score = 72.8 bits (177), Expect = 7e-11
Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 2/189 (1%)
Frame = +2
Query: 230 SRTVKITNVPANTDPLKLKDFLESLVDEKGCVYACKVLPTKNPRHETTQAIVQFERKLVA 409
S+T++I+ P+ ++ FLE E G V A K+ P+KN T AIVQF R+
Sbjct: 3 SKTIQISRFPSYATAKQVTVFLEKYTGE-GSVIALKLRPSKN---STVYAIVQFPRREDV 58
Query: 410 QKL-CGISEMELTYKLILLLYKDSHVLSVDPLERDLVKRPRRAPVEVATTRVYLGCQVNH 586
Q L I + +L+Y D H L+V +ERD++ +PR+ + ++ GC ++
Sbjct: 59 QDLFVMIQQGKLSY--------DGHYLTVRNMERDIIPKPRKPLFVLENVTLHFGCPLSQ 110
Query: 587 NEYCVLWSSTGHVDFELCANMKKVFIVLTDHGI-KYMLVSSFGSIQRMHHYGSASRGTKY 763
VL S V M+K++ +L+ HGI Y L ++ SI + + S+ + +++
Sbjct: 111 KRLSVL-RSMEDVKVNFGFEMRKIYFLLS-HGIHSYKLELAYESIWEIRLHRSSVQNSQF 168
Query: 764 LVMPLYSAP 790
LV+ + +AP
Sbjct: 169 LVVQVVAAP 177