BLASTX nr result
ID: Ephedra29_contig00016631
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00016631
(1153 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_015896204.1 PREDICTED: ribonuclease H2 subunit B [Ziziphus ju... 240 7e-74
XP_011623707.1 PREDICTED: ribonuclease H2 subunit B [Amborella t... 236 2e-72
XP_004138774.1 PREDICTED: ribonuclease H2 subunit B isoform X1 [... 235 5e-72
XP_015573896.1 PREDICTED: ribonuclease H2 subunit B [Ricinus com... 234 1e-71
EEF44610.1 conserved hypothetical protein [Ricinus communis] 234 2e-71
KGN62854.1 hypothetical protein Csa_2G377900 [Cucumis sativus] 235 6e-71
OMO89331.1 Ribonuclease H2, subunit B [Corchorus capsularis] 232 1e-70
XP_016737501.1 PREDICTED: ribonuclease H2 subunit B-like [Gossyp... 231 3e-70
KNA18643.1 hypothetical protein SOVF_068820 [Spinacia oleracea] 230 6e-70
XP_006468662.1 PREDICTED: ribonuclease H2 subunit B [Citrus sine... 229 9e-70
XP_017637258.1 PREDICTED: ribonuclease H2 subunit B isoform X2 [... 229 1e-69
CDX98667.1 BnaA03g44520D [Brassica napus] 231 1e-69
XP_017239771.1 PREDICTED: ribonuclease H2 subunit B [Daucus caro... 229 1e-69
XP_012439218.1 PREDICTED: ribonuclease H2 subunit B isoform X2 [... 228 2e-69
XP_006448513.1 hypothetical protein CICLE_v10016172mg [Citrus cl... 228 2e-69
XP_016736772.1 PREDICTED: ribonuclease H2 subunit B-like isoform... 228 3e-69
XP_013741398.1 PREDICTED: ribonuclease H2 subunit B-like [Brassi... 228 5e-69
CAN79021.1 hypothetical protein VITISV_009443 [Vitis vinifera] 227 6e-69
XP_008445068.1 PREDICTED: ribonuclease H2 subunit B isoform X3 [... 227 6e-69
XP_013717434.1 PREDICTED: ribonuclease H2 subunit B-like [Brassi... 227 6e-69
>XP_015896204.1 PREDICTED: ribonuclease H2 subunit B [Ziziphus jujuba]
Length = 281
Score = 240 bits (612), Expect = 7e-74
Identities = 121/262 (46%), Positives = 168/262 (64%), Gaps = 2/262 (0%)
Frame = -2
Query: 996 GVVNNLGGCFLQLCHPKSGISTTYVLINDSLQELHWFKQQYSSWFLGNDVCEDGSLYIAT 817
G N G +L L HPKSG T Y+L+N+ LQELHWFKQ YSSWFLG+ V EDG LYIAT
Sbjct: 19 GCTENGVGRYLSLRHPKSGNKTCYLLVNEGLQELHWFKQSYSSWFLGDYVAEDGRLYIAT 78
Query: 816 PVDPIFIILPLLDKGRMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVKD 637
PVDP+F++LP+ ++ RMKK DDPGKFR +++I+F++GYP Y+ L + + +CEVK+
Sbjct: 79 PVDPVFVLLPIFEEARMKKRDDPGKFRQIDEIIFIDGYPGYQHLLSIAEKSMQVVCEVKE 138
Query: 636 VSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDP 457
V S+ ++RLD+ K+++WLCCKV+QL +TL TL+++YA + E + VSD LGEYLK++P
Sbjct: 139 VGSLKFFRLDDSKVLSWLCCKVSQLKQTLLTLDKNYAAQGEKETVSDVASILGEYLKDEP 198
Query: 456 WXXXXXXXXXXXLETI--KKPRMKEPTPMNLAFDSHLDSDLPGSLKSKGKTTQKNSASRG 283
W L I K P ++ P P D S L + K K+T KNS G
Sbjct: 199 WLKHLCDHLRLNLLEITRKAPDIENPPPHAAESDLGSCSVLQ---EGKNKSTNKNSRP-G 254
Query: 282 RPSQKKVDEKGLQKITSMFKKS 217
+ ++K E I MF ++
Sbjct: 255 KQAKKAKVETESHNIREMFTRA 276
>XP_011623707.1 PREDICTED: ribonuclease H2 subunit B [Amborella trichopoda]
Length = 279
Score = 236 bits (603), Expect = 2e-72
Identities = 121/253 (47%), Positives = 162/253 (64%)
Frame = -2
Query: 975 GCFLQLCHPKSGISTTYVLINDSLQELHWFKQQYSSWFLGNDVCEDGSLYIATPVDPIFI 796
GC L L HPKSG + Y+ + LQELHWFKQ Y SWF+G+ +CEDG +Y+ATPVDP+FI
Sbjct: 34 GCLLSLRHPKSGKPSCYLFTDGLLQELHWFKQSYGSWFIGDYICEDGGIYVATPVDPVFI 93
Query: 795 ILPLLDKGRMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVKDVSSMNYY 616
+LPL + RMKKGD+ GKFR ++DI+F++GYP YR L P++ + L AICEVK+V S +
Sbjct: 94 LLPLFHEARMKKGDELGKFRQVDDIMFVDGYPGYRYLLPVVSNSLQAICEVKEVGSEIFC 153
Query: 615 RLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPWXXXXXX 436
RLD+ K++AWL CKVN L LPTL+++YA R+E D + DA+ LGEYL E+PW
Sbjct: 154 RLDDSKVVAWLHCKVNNLKLVLPTLDKNYAVRDEKDTLRDAVSLLGEYLSEEPWIRLLCS 213
Query: 435 XXXXXLETIKKPRMKEPTPMNLAFDSHLDSDLPGSLKSKGKTTQKNSASRGRPSQKKVDE 256
L+ K + + P +A +S L D KG+T GR S+KK E
Sbjct: 214 HLSISLDYAVKSDVIDILP--IASESTLVQD------EKGRT----RTGTGRQSKKKKTE 261
Query: 255 KGLQKITSMFKKS 217
G I MF+K+
Sbjct: 262 TGSLNIKDMFRKA 274
>XP_004138774.1 PREDICTED: ribonuclease H2 subunit B isoform X1 [Cucumis sativus]
Length = 281
Score = 235 bits (600), Expect = 5e-72
Identities = 122/263 (46%), Positives = 161/263 (61%), Gaps = 3/263 (1%)
Frame = -2
Query: 996 GVVNNLGGCFLQLCHPKSGISTTYVLINDSLQELHWFKQQYSSWFLGNDVCEDGSLYIAT 817
GV N+ GCFL L HPKSG T ++ +N+ L+E+HWFKQ YSSWFLG+ V EDG LY AT
Sbjct: 19 GVKENVTGCFLSLRHPKSGNPTCFLYVNEMLEEIHWFKQSYSSWFLGDYVAEDGRLYSAT 78
Query: 816 PVDPIFIILPLLDKGRMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVKD 637
PVDP+FI LP+ ++ RMKKGDD GKFR L+DI+F+ GYP Y L PL + +CEVK+
Sbjct: 79 PVDPVFIFLPIFEEARMKKGDDLGKFRQLDDIMFINGYPGYLHLLPLAEKFMQVVCEVKE 138
Query: 636 VSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDP 457
V S ++RLD+ K++AWL KV QL TL TL+++YA R E + + DA+ LGEYLK+ P
Sbjct: 139 VGSSRFFRLDDSKVLAWLYHKVCQLKRTLCTLDKNYAAREEKETLCDAVSILGEYLKDQP 198
Query: 456 W-XXXXXXXXXXXLETIKKPRMKE--PTPMNLAFDSHLDSDLPGSLKSKGKTTQKNSASR 286
W E +K E PT + FDS + D GS G +N
Sbjct: 199 WLKLLCDHLKLNFAEATRKASDSERAPTSIENNFDS-ISQDKSGSRSGSGAKNTRN---- 253
Query: 285 GRPSQKKVDEKGLQKITSMFKKS 217
G+ ++K E + I MF K+
Sbjct: 254 GKQAKKPKVETESRNIKDMFSKA 276
>XP_015573896.1 PREDICTED: ribonuclease H2 subunit B [Ricinus communis]
Length = 274
Score = 234 bits (597), Expect = 1e-71
Identities = 117/275 (42%), Positives = 176/275 (64%)
Frame = -2
Query: 1041 DNRVLIVHSLESDAVGVVNNLGGCFLQLCHPKSGISTTYVLINDSLQELHWFKQQYSSWF 862
+ R+LI HS +D VG + L L HPKSG +T Y+L N LQELHWFKQ Y+SWF
Sbjct: 9 ETRLLIAHSANADGVGRL-------LSLQHPKSGKTTCYLLNNRMLQELHWFKQSYTSWF 61
Query: 861 LGNDVCEDGSLYIATPVDPIFIILPLLDKGRMKKGDDPGKFRSLEDILFLEGYPEYRLLY 682
LG+ VC+DG LY ATPVDP+FI+LP+ ++ RM+KGDDPGKFR L++ILF+ GYP YR L
Sbjct: 62 LGDYVCQDGCLYSATPVDPVFILLPIFEEARMRKGDDPGKFRQLDEILFINGYPGYRYLM 121
Query: 681 PLMHDLLTAICEVKDVSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAV 502
P+ + + +CE+K++ S ++RL++ K+ AWL CKV+QL + + +L+++YA ++E + +
Sbjct: 122 PIAENCMQVVCEIKEIGSSKFFRLNDSKVFAWLLCKVSQLKQAVSSLDKNYAAQDEKNTL 181
Query: 501 SDAIGFLGEYLKEDPWXXXXXXXXXXXLETIKKPRMKEPTPMNLAFDSHLDSDLPGSLKS 322
+DAI LGEYLK++PW L ++ R +L ++ S+L ++
Sbjct: 182 ADAIMILGEYLKDEPW--LKLLCNHLKLNLLEATRKVPDAETSLTENNPASSNL---MQE 236
Query: 321 KGKTTQKNSASRGRPSQKKVDEKGLQKITSMFKKS 217
KGK K + + + KV+ + L I MF ++
Sbjct: 237 KGKNDGKTKRTGKQAKKAKVETESL-NIREMFSRA 270
>EEF44610.1 conserved hypothetical protein [Ricinus communis]
Length = 299
Score = 234 bits (597), Expect = 2e-71
Identities = 117/275 (42%), Positives = 176/275 (64%)
Frame = -2
Query: 1041 DNRVLIVHSLESDAVGVVNNLGGCFLQLCHPKSGISTTYVLINDSLQELHWFKQQYSSWF 862
+ R+LI HS +D VG + L L HPKSG +T Y+L N LQELHWFKQ Y+SWF
Sbjct: 34 ETRLLIAHSANADGVGRL-------LSLQHPKSGKTTCYLLNNRMLQELHWFKQSYTSWF 86
Query: 861 LGNDVCEDGSLYIATPVDPIFIILPLLDKGRMKKGDDPGKFRSLEDILFLEGYPEYRLLY 682
LG+ VC+DG LY ATPVDP+FI+LP+ ++ RM+KGDDPGKFR L++ILF+ GYP YR L
Sbjct: 87 LGDYVCQDGCLYSATPVDPVFILLPIFEEARMRKGDDPGKFRQLDEILFINGYPGYRYLM 146
Query: 681 PLMHDLLTAICEVKDVSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAV 502
P+ + + +CE+K++ S ++RL++ K+ AWL CKV+QL + + +L+++YA ++E + +
Sbjct: 147 PIAENCMQVVCEIKEIGSSKFFRLNDSKVFAWLLCKVSQLKQAVSSLDKNYAAQDEKNTL 206
Query: 501 SDAIGFLGEYLKEDPWXXXXXXXXXXXLETIKKPRMKEPTPMNLAFDSHLDSDLPGSLKS 322
+DAI LGEYLK++PW L ++ R +L ++ S+L ++
Sbjct: 207 ADAIMILGEYLKDEPW--LKLLCNHLKLNLLEATRKVPDAETSLTENNPASSNL---MQE 261
Query: 321 KGKTTQKNSASRGRPSQKKVDEKGLQKITSMFKKS 217
KGK K + + + KV+ + L I MF ++
Sbjct: 262 KGKNDGKTKRTGKQAKKAKVETESL-NIREMFSRA 295
>KGN62854.1 hypothetical protein Csa_2G377900 [Cucumis sativus]
Length = 363
Score = 235 bits (600), Expect = 6e-71
Identities = 122/263 (46%), Positives = 161/263 (61%), Gaps = 3/263 (1%)
Frame = -2
Query: 996 GVVNNLGGCFLQLCHPKSGISTTYVLINDSLQELHWFKQQYSSWFLGNDVCEDGSLYIAT 817
GV N+ GCFL L HPKSG T ++ +N+ L+E+HWFKQ YSSWFLG+ V EDG LY AT
Sbjct: 101 GVKENVTGCFLSLRHPKSGNPTCFLYVNEMLEEIHWFKQSYSSWFLGDYVAEDGRLYSAT 160
Query: 816 PVDPIFIILPLLDKGRMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVKD 637
PVDP+FI LP+ ++ RMKKGDD GKFR L+DI+F+ GYP Y L PL + +CEVK+
Sbjct: 161 PVDPVFIFLPIFEEARMKKGDDLGKFRQLDDIMFINGYPGYLHLLPLAEKFMQVVCEVKE 220
Query: 636 VSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDP 457
V S ++RLD+ K++AWL KV QL TL TL+++YA R E + + DA+ LGEYLK+ P
Sbjct: 221 VGSSRFFRLDDSKVLAWLYHKVCQLKRTLCTLDKNYAAREEKETLCDAVSILGEYLKDQP 280
Query: 456 W-XXXXXXXXXXXLETIKKPRMKE--PTPMNLAFDSHLDSDLPGSLKSKGKTTQKNSASR 286
W E +K E PT + FDS + D GS G +N
Sbjct: 281 WLKLLCDHLKLNFAEATRKASDSERAPTSIENNFDS-ISQDKSGSRSGSGAKNTRN---- 335
Query: 285 GRPSQKKVDEKGLQKITSMFKKS 217
G+ ++K E + I MF K+
Sbjct: 336 GKQAKKPKVETESRNIKDMFSKA 358
>OMO89331.1 Ribonuclease H2, subunit B [Corchorus capsularis]
Length = 279
Score = 232 bits (591), Expect = 1e-70
Identities = 114/251 (45%), Positives = 164/251 (65%), Gaps = 1/251 (0%)
Frame = -2
Query: 966 LQLCHPKSGISTTYVLINDSLQELHWFKQQYSSWFLGNDVCEDGSLYIATPVDPIFIILP 787
L L HPKSG+ T+Y+L N SLQELHWFKQ Y SWFLG+ V EDGSLY ATP+DP+FI+LP
Sbjct: 30 LSLRHPKSGLKTSYLLCNGSLQELHWFKQSYGSWFLGDYVSEDGSLYTATPIDPVFIMLP 89
Query: 786 LLDKGRMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVKDVSSMNYYRLD 607
+ ++ RMKK DDPGKFR L++ILF+ YP Y+ L+ + + + +CE+K++ SM +YRLD
Sbjct: 90 IFEEARMKKMDDPGKFRQLDEILFISDYPGYQHLFSMAENCMQIVCEIKEIGSMKFYRLD 149
Query: 606 EQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPWXXXXXXXXX 427
+ K++AWL KV QL +TLP L+++YA R++ D ++DAI LGEYLK++PW
Sbjct: 150 DMKVLAWLYHKVCQLKQTLPALDQNYAARDDKDTLADAISILGEYLKDEPW--LKLLSNH 207
Query: 426 XXLETIKKPRMKEPTPMNLAFDSHLDSDLPGSLKSKGKTTQKNSASRGRPSQKKVD-EKG 250
L+ ++ R+ + F + ++S + S KGK T + R + KK E
Sbjct: 208 FKLDLLEATRVASDYEV---FPTSIESPIASSNLPKGKNTSEKRTGRNQKQAKKAKVETE 264
Query: 249 LQKITSMFKKS 217
+ I MF ++
Sbjct: 265 SRNIKEMFTRA 275
>XP_016737501.1 PREDICTED: ribonuclease H2 subunit B-like [Gossypium hirsutum]
Length = 280
Score = 231 bits (588), Expect = 3e-70
Identities = 116/252 (46%), Positives = 157/252 (62%), Gaps = 1/252 (0%)
Frame = -2
Query: 969 FLQLCHPKSGISTTYVLINDSLQELHWFKQQYSSWFLGNDVCEDGSLYIATPVDPIFIIL 790
FL L HPKSG+ T+Y+L N LQELHWFKQ Y SWFLG+ V EDGSLY ATP+DP+FI+L
Sbjct: 29 FLSLRHPKSGVRTSYLLCNGLLQELHWFKQPYGSWFLGDYVSEDGSLYTATPIDPVFIML 88
Query: 789 PLLDKGRMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVKDVSSMNYYRL 610
PL + RMKKGDDPGKFR L++ILF+ YP Y+ L+ + D + +CE K++ S ++RL
Sbjct: 89 PLFEDARMKKGDDPGKFRQLDEILFVNDYPGYQQLFSIAKDCMEIVCESKEIGSTKFFRL 148
Query: 609 DEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPWXXXXXXXX 430
D++K+ AWL KV QL +TLP L+++YA R E D ++D++ LGEYLK+DPW
Sbjct: 149 DDKKVFAWLHYKVCQLKQTLPALDQNYAAREEKDTLADSVSILGEYLKDDPWLKLLCDHF 208
Query: 429 XXXLETIKKPRMKEPTPMNLAFDSHLDSDLPGSLKSKGKTTQKNSASRGRPSQKKVD-EK 253
+ P K S ++S + S S+GK T + R KKV E
Sbjct: 209 -----KLNLPEAKRIAADIEVCPSAIESPVGSSNFSQGKNTSEKKTGRNVKQAKKVKVET 263
Query: 252 GLQKITSMFKKS 217
+ I MF ++
Sbjct: 264 ESRNIKEMFTRA 275
>KNA18643.1 hypothetical protein SOVF_068820 [Spinacia oleracea]
Length = 282
Score = 230 bits (586), Expect = 6e-70
Identities = 111/262 (42%), Positives = 167/262 (63%), Gaps = 2/262 (0%)
Frame = -2
Query: 996 GVVNNLGGCFLQLCHPKSGISTTYVLINDSLQELHWFKQQYSSWFLGNDVCEDGSLYIAT 817
G + G L L HPKSG + Y+ IND L EL WFK+ ++SWFLG VCEDGSLY++T
Sbjct: 20 GTSGSDAGQLLSLRHPKSGTAANYLFINDGLHELQWFKKSHTSWFLGEYVCEDGSLYLST 79
Query: 816 PVDPIFIILPLLDKGRMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVKD 637
PVDP+FI+LP+ + RMKK DDPGKFR L++IL+++GYP Y+ L P++ + ++ +CEVKD
Sbjct: 80 PVDPVFIMLPIFEDARMKKRDDPGKFRQLDEILYIDGYPGYQHLLPVLENSMSVVCEVKD 139
Query: 636 VSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDP 457
+ S ++RLD+ K+IAWLC KV++L +TL TL+++YA +++ +++ + LGEYL++ P
Sbjct: 140 IGSTKFFRLDDSKVIAWLCAKVDRLKKTLLTLDKNYAAQDDKHTLAEVVSILGEYLRDKP 199
Query: 456 WXXXXXXXXXXXLETIKKPRMKEPTPMNLAFDSHLDSDLPGSLKSKG--KTTQKNSASRG 283
W L+ + + +P+ DS L S++ G ++T K SA
Sbjct: 200 WVELLCSHLRLDLQDLTRKADDHSSPVP-------DSGLQFSIQENGGAESTGKKSAKIV 252
Query: 282 RPSQKKVDEKGLQKITSMFKKS 217
RP +K EK I MF ++
Sbjct: 253 RPGKKVKIEKDSHNIKDMFSRA 274
>XP_006468662.1 PREDICTED: ribonuclease H2 subunit B [Citrus sinensis]
Length = 283
Score = 229 bits (585), Expect = 9e-70
Identities = 114/269 (42%), Positives = 175/269 (65%), Gaps = 4/269 (1%)
Frame = -2
Query: 1011 ESDAVGVVNNLGGCFLQLCHPKSGISTTYVLINDSLQELHWFKQQYSSWFLGNDVCEDGS 832
+S A G + GG L LCHPKSG T Y+L++ LQEL+W KQ Y SWFLGN VCEDGS
Sbjct: 17 DSSATG---SSGGRLLSLCHPKSGQKTCYLLVDGVLQELNWLKQSYKSWFLGNYVCEDGS 73
Query: 831 LYIATPVDPIFIILPLLDKGRMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAI 652
+Y ATP+DP+FI+LP+ ++ R+KKG+DPGKFR L++I+F++GYP Y+ + PL + + +
Sbjct: 74 IYAATPIDPVFIMLPIFEEARLKKGEDPGKFRQLDEIIFIDGYPGYQYILPLAENCMQVV 133
Query: 651 CEVKDVSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEY 472
CEVK++ S ++RLD+ K+IAWL CKV L +TL L+++YA ++E D +++A+ LGEY
Sbjct: 134 CEVKEIGSSKFFRLDDLKVIAWLYCKVCVLKQTLSVLDQNYAAQDEKDTLANAVSILGEY 193
Query: 471 LKEDPW--XXXXXXXXXXXLETIKKPRMKEPTPMNLAFDSHLDSDLPGS--LKSKGKTTQ 304
+K++PW ET K P ++ F S L+S++ S L+ + K+ +
Sbjct: 194 VKDEPWLKLLCKHLNLDLLKETGKAPCIE-------VFPSSLESNVGSSNLLQERRKSDR 246
Query: 303 KNSASRGRPSQKKVDEKGLQKITSMFKKS 217
K + + G+ ++ E + I MF ++
Sbjct: 247 KTNRT-GKETKMAKPETESRNIKEMFSRA 274
>XP_017637258.1 PREDICTED: ribonuclease H2 subunit B isoform X2 [Gossypium
arboreum]
Length = 280
Score = 229 bits (584), Expect = 1e-69
Identities = 115/252 (45%), Positives = 156/252 (61%), Gaps = 1/252 (0%)
Frame = -2
Query: 969 FLQLCHPKSGISTTYVLINDSLQELHWFKQQYSSWFLGNDVCEDGSLYIATPVDPIFIIL 790
FL L HPKSG+ST+Y+L N LQELHWFKQ Y SWFLG+ V EDGSLY ATP+DP+FI+L
Sbjct: 29 FLSLRHPKSGVSTSYLLCNGLLQELHWFKQPYGSWFLGDYVSEDGSLYTATPIDPVFIML 88
Query: 789 PLLDKGRMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVKDVSSMNYYRL 610
PL + RMKKGDDPGKFR L++ILF+ YP Y+ L+ + D + +CE K++ S ++RL
Sbjct: 89 PLFEDARMKKGDDPGKFRQLDEILFVNDYPGYQQLFSIARDCMEIVCESKEIGSTKFFRL 148
Query: 609 DEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPWXXXXXXXX 430
D++ + AWL KV QL +TLP L+++YA R E D ++D++ LGEYLK+DPW
Sbjct: 149 DDKMVFAWLHYKVCQLKQTLPALDQNYAAREEKDTLADSVSILGEYLKDDPWLKLLCDHF 208
Query: 429 XXXLETIKKPRMKEPTPMNLAFDSHLDSDLPGSLKSKGKTTQKNSASRGRPSQKKVD-EK 253
+ P K S ++S + S S+GK T + R KK E
Sbjct: 209 -----KLNLPEAKRIAADIEVCPSAIESPVGSSNFSQGKNTSEKKTGRNVKQAKKAKVET 263
Query: 252 GLQKITSMFKKS 217
+ I MF ++
Sbjct: 264 ESRNIKEMFTRA 275
>CDX98667.1 BnaA03g44520D [Brassica napus]
Length = 329
Score = 231 bits (588), Expect = 1e-69
Identities = 120/273 (43%), Positives = 165/273 (60%)
Frame = -2
Query: 1035 RVLIVHSLESDAVGVVNNLGGCFLQLCHPKSGISTTYVLINDSLQELHWFKQQYSSWFLG 856
RVLI SD+ G V N G L L HPKS T Y+ N+ LQE+ WFKQ Y SWFLG
Sbjct: 63 RVLIA----SDS-GCVGNKPGELLTLRHPKSENGTCYLFSNEMLQEIQWFKQSYGSWFLG 117
Query: 855 NDVCEDGSLYIATPVDPIFIILPLLDKGRMKKGDDPGKFRSLEDILFLEGYPEYRLLYPL 676
+ + +DGSLY+ATPVDP+FI+LP+ D RMKKG+DPGKFR L++ILF+EGYPEY+ L PL
Sbjct: 118 DYISQDGSLYMATPVDPVFILLPIFDVARMKKGEDPGKFRQLDEILFVEGYPEYQHLLPL 177
Query: 675 MHDLLTAICEVKDVSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSD 496
+ +C+ ++V SM +YRLD K++AWL CKVN L +TLP L+++YA + E + D
Sbjct: 178 AEKSMQIVCQTQEVGSMKFYRLDNSKVLAWLTCKVNCLKKTLPELDKNYAAQGEKQTLVD 237
Query: 495 AIGFLGEYLKEDPWXXXXXXXXXXXLETIKKPRMKEPTPMNLAFDSHLDSDLPGSLKSKG 316
A+ +GEYLK +PW P MKE NL + + + S + K
Sbjct: 238 AVSIVGEYLKTEPWLKLLYDHLGL---EFVDPTMKETNTENLPYANENKMEYSNSSQEK- 293
Query: 315 KTTQKNSASRGRPSQKKVDEKGLQKITSMFKKS 217
K + G+ +++ E G + I MF ++
Sbjct: 294 --ANKKTGKPGKQTKQAKVETGSKNIRDMFTRA 324
>XP_017239771.1 PREDICTED: ribonuclease H2 subunit B [Daucus carota subsp. sativus]
Length = 274
Score = 229 bits (583), Expect = 1e-69
Identities = 114/266 (42%), Positives = 164/266 (61%)
Frame = -2
Query: 1014 LESDAVGVVNNLGGCFLQLCHPKSGISTTYVLINDSLQELHWFKQQYSSWFLGNDVCEDG 835
L SD G GC L LCHPK+G T+Y+L + +LQE+HWFK Y SWFLG+ VCEDG
Sbjct: 14 LSSDGGGE-GGKAGCLLSLCHPKTGNPTSYLLTDGNLQEIHWFKTAYGSWFLGDYVCEDG 72
Query: 834 SLYIATPVDPIFIILPLLDKGRMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTA 655
LY ATP+DP+FI+LP+ D+ RMKKG+D GKFR L++I+F++GYP Y+ L + +
Sbjct: 73 RLYAATPIDPVFILLPIFDEARMKKGEDQGKFRQLDEIIFIQGYPGYQHLLSIADKSMQV 132
Query: 654 ICEVKDVSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGE 475
+C+ K+V S ++RL++ K++AWL KV+QL +TLPTL+R+YA + E D ++DA+ LGE
Sbjct: 133 VCDFKEVGSTKFFRLNDSKVLAWLHFKVHQLKQTLPTLDRNYAAQAEKDTLADAVSILGE 192
Query: 474 YLKEDPWXXXXXXXXXXXLETIKKPRMKEPTPMNLAFDSHLDSDLPGSLKSKGKTTQKNS 295
YLK++PW L+ K P K S +S +P + K +
Sbjct: 193 YLKDEPWLKLLCSKLKIDLQEAKPPDSK-------ILPSSTESSVPSFDDVQEKNGIEKR 245
Query: 294 ASRGRPSQKKVDEKGLQKITSMFKKS 217
+R + + K+ E G I MF K+
Sbjct: 246 TTRQQSKKAKI-ETGSLNIKDMFSKA 270
>XP_012439218.1 PREDICTED: ribonuclease H2 subunit B isoform X2 [Gossypium
raimondii] KJB51509.1 hypothetical protein
B456_008G219900 [Gossypium raimondii]
Length = 280
Score = 228 bits (582), Expect = 2e-69
Identities = 115/252 (45%), Positives = 156/252 (61%), Gaps = 1/252 (0%)
Frame = -2
Query: 969 FLQLCHPKSGISTTYVLINDSLQELHWFKQQYSSWFLGNDVCEDGSLYIATPVDPIFIIL 790
FL L HPKSG+ T+Y+L N LQELHWFKQ Y SWFLG+ V EDGSLY ATP+DP+FI+L
Sbjct: 29 FLSLRHPKSGVRTSYLLCNRLLQELHWFKQPYGSWFLGDYVSEDGSLYTATPIDPVFIML 88
Query: 789 PLLDKGRMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVKDVSSMNYYRL 610
PL + RMKKGDDPGKFR L++ILF+ YP Y+ L+ + D + +CE K++ S ++RL
Sbjct: 89 PLFEDARMKKGDDPGKFRQLDEILFVNDYPGYQQLFSIAKDCMEIVCESKEIGSTKFFRL 148
Query: 609 DEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPWXXXXXXXX 430
D++K+ AWL KV QL +TLP L+++YA R E D ++D++ LGEYLK+DPW
Sbjct: 149 DDKKVFAWLHYKVCQLKQTLPALDQNYAAREEKDTLADSVSILGEYLKDDPWLKLLCDHF 208
Query: 429 XXXLETIKKPRMKEPTPMNLAFDSHLDSDLPGSLKSKGKTTQKNSASRGRPSQKKVD-EK 253
+ P K S ++S + S S+GK + R KKV E
Sbjct: 209 -----KLNLPEAKRIAADIEVCPSAIESPVSSSNFSQGKNPSEKKTGRNVKQAKKVKVET 263
Query: 252 GLQKITSMFKKS 217
+ I MF ++
Sbjct: 264 ESRNIKEMFTRA 275
>XP_006448513.1 hypothetical protein CICLE_v10016172mg [Citrus clementina] ESR61753.1
hypothetical protein CICLE_v10016172mg [Citrus
clementina]
Length = 283
Score = 228 bits (582), Expect = 2e-69
Identities = 111/267 (41%), Positives = 172/267 (64%), Gaps = 2/267 (0%)
Frame = -2
Query: 1011 ESDAVGVVNNLGGCFLQLCHPKSGISTTYVLINDSLQELHWFKQQYSSWFLGNDVCEDGS 832
+S A G + GG L LCHPKSG T Y+L++ LQEL+W KQ Y SWFLGN VCEDGS
Sbjct: 17 DSSATG---SSGGRLLSLCHPKSGQKTCYLLVDGVLQELNWLKQSYKSWFLGNYVCEDGS 73
Query: 831 LYIATPVDPIFIILPLLDKGRMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAI 652
+Y ATP+DP+FI+LP+ ++ R+KKG+DPGKFR L++I+F++GYP Y+ L PL + + +
Sbjct: 74 IYAATPIDPVFIMLPIFEEARLKKGEDPGKFRQLDEIIFIDGYPGYQYLLPLAENCMQVV 133
Query: 651 CEVKDVSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEY 472
CEVK++ S ++RLD+ K++AWL CKV L +TL L+++YA ++E D +++A+ LGEY
Sbjct: 134 CEVKEIGSSKFFRLDDLKVLAWLYCKVCVLKQTLSVLDQNYAAQDEKDTLANAVSILGEY 193
Query: 471 LKEDPWXXXXXXXXXXXLETIKKPRMKEPTPMNLAFDSHLDSDLPGS--LKSKGKTTQKN 298
+K++ W + P+ P F S L+S++ S L+ + K+ +K
Sbjct: 194 VKDESWLKLLCKHL-----NLDLPKETGKAPYIEVFPSSLESNVGSSNLLQERRKSDRKT 248
Query: 297 SASRGRPSQKKVDEKGLQKITSMFKKS 217
+ + G+ ++ E + I MF ++
Sbjct: 249 NRT-GKETKMAKPETESRNIKEMFSRA 274
>XP_016736772.1 PREDICTED: ribonuclease H2 subunit B-like isoform X2 [Gossypium
hirsutum]
Length = 280
Score = 228 bits (581), Expect = 3e-69
Identities = 114/252 (45%), Positives = 156/252 (61%), Gaps = 1/252 (0%)
Frame = -2
Query: 969 FLQLCHPKSGISTTYVLINDSLQELHWFKQQYSSWFLGNDVCEDGSLYIATPVDPIFIIL 790
FL L HPK+G+ST+Y+L N LQELHWFKQ Y SWFLG+ V EDGSLY ATP+DP+FI+L
Sbjct: 29 FLSLRHPKTGVSTSYLLCNGLLQELHWFKQPYGSWFLGDYVSEDGSLYTATPIDPVFIML 88
Query: 789 PLLDKGRMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVKDVSSMNYYRL 610
PL + RMKKGDDPGKFR L++ILF+ YP Y+ L+ + D + +CE K++ S ++RL
Sbjct: 89 PLFEDARMKKGDDPGKFRQLDEILFVNDYPGYQQLFSIARDCMEIVCESKEIGSTKFFRL 148
Query: 609 DEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKEDPWXXXXXXXX 430
D++ + AWL KV QL +TLP L+++YA R E D ++D++ LGEYLK+DPW
Sbjct: 149 DDKMVFAWLHYKVCQLKQTLPALDQNYAAREEKDTLADSVSILGEYLKDDPWLKLLCDHF 208
Query: 429 XXXLETIKKPRMKEPTPMNLAFDSHLDSDLPGSLKSKGKTTQKNSASRGRPSQKKVD-EK 253
+ P K S ++S + S S+GK T + R KK E
Sbjct: 209 -----KLNLPEAKRIAADIEVCPSAIESPVGSSNFSQGKNTSEKKTGRNVKQAKKAKVET 263
Query: 252 GLQKITSMFKKS 217
+ I MF ++
Sbjct: 264 ESRNIKEMFTRA 275
>XP_013741398.1 PREDICTED: ribonuclease H2 subunit B-like [Brassica napus]
XP_013741399.1 PREDICTED: ribonuclease H2 subunit B-like
[Brassica napus] XP_013741400.1 PREDICTED: ribonuclease
H2 subunit B-like [Brassica napus] XP_013741402.1
PREDICTED: ribonuclease H2 subunit B-like [Brassica
napus]
Length = 280
Score = 228 bits (580), Expect = 5e-69
Identities = 118/273 (43%), Positives = 165/273 (60%)
Frame = -2
Query: 1035 RVLIVHSLESDAVGVVNNLGGCFLQLCHPKSGISTTYVLINDSLQELHWFKQQYSSWFLG 856
RVLI SD+ G V N G L L HPKS T Y+ N+ LQE+ WFKQ Y SWFLG
Sbjct: 14 RVLIA----SDS-GCVGNKPGELLTLRHPKSENGTCYLFSNEMLQEIQWFKQSYGSWFLG 68
Query: 855 NDVCEDGSLYIATPVDPIFIILPLLDKGRMKKGDDPGKFRSLEDILFLEGYPEYRLLYPL 676
+ + +DGSLY+ATP+DP+FI+LP+ D+ RMKKG+DPGKFR L++ILF+EGYPEY+ L PL
Sbjct: 69 DYISQDGSLYMATPIDPVFILLPIFDEARMKKGEDPGKFRQLDEILFVEGYPEYQHLLPL 128
Query: 675 MHDLLTAICEVKDVSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSD 496
+ +C+ ++V SM +YRLD K++AWL CKV+ L +TLP L+++YA + E + D
Sbjct: 129 AEKSMQIVCQTQEVGSMKFYRLDNSKVLAWLTCKVSCLKKTLPELDKNYAAQGEKQTLVD 188
Query: 495 AIGFLGEYLKEDPWXXXXXXXXXXXLETIKKPRMKEPTPMNLAFDSHLDSDLPGSLKSKG 316
A+ +GEYLK +PW P MKE NL + + S + K
Sbjct: 189 AVSIVGEYLKTEPWLKLLYDHLGL---EFVDPTMKETNTENLPNANENKMEYSNSSQEK- 244
Query: 315 KTTQKNSASRGRPSQKKVDEKGLQKITSMFKKS 217
K + G+ +++ E G + I MF ++
Sbjct: 245 --ANKKTGKPGKQTKQAKVETGSKNIRDMFSRA 275
>CAN79021.1 hypothetical protein VITISV_009443 [Vitis vinifera]
Length = 277
Score = 227 bits (579), Expect = 6e-69
Identities = 113/265 (42%), Positives = 167/265 (63%), Gaps = 4/265 (1%)
Frame = -2
Query: 999 VGVVNNLGGCFLQLCHPKSGISTTYVLINDSLQELHWFKQQYSSWFLGNDVCEDGSLYIA 820
V + N G FL L HPKSG +T Y+ N +LQEL+WFKQ Y SWFLG+ VCEDG LY A
Sbjct: 18 VNAIGNGLGQFLSLRHPKSGKATCYLFKNGTLQELNWFKQSYGSWFLGDYVCEDGRLYTA 77
Query: 819 TPVDPIFIILPLLDKGRMKKGDDPGKFRSLEDILFLEGYPEYRLLYPLMHDLLTAICEVK 640
T VDP+FI+LP+ ++ RMKK DDPGKFR L++I+F+ YP Y+ L P+ + + +CE+K
Sbjct: 78 TIVDPVFIMLPIFEEARMKKRDDPGKFRQLDEIMFVNSYPGYQHLIPIAENCMQVVCEIK 137
Query: 639 DVSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSDAIGFLGEYLKED 460
++ S ++RLD+ K++AWLC KV+QL + LPTL+++YA R++ D ++DAI LGEYL+++
Sbjct: 138 EIGSSKFFRLDDSKVLAWLCYKVHQLKQILPTLDKNYAARDKKDTLTDAISILGEYLEDE 197
Query: 459 PWXXXXXXXXXXXLETIKKPRMKEPTPMNLAFDSH---LDSDLPGSLKSKGKTTQKNSAS 289
PW K + + T + H D+ L S + +GK+ + +
Sbjct: 198 PWLKLLCDHL--------KLNLLDATMKAXVIEFHPTAPDNSLGSSNQLQGKSGNERKTT 249
Query: 288 R-GRPSQKKVDEKGLQKITSMFKKS 217
R G+ +K EK + I MF ++
Sbjct: 250 RPGKQPKKAKVEKDSRNIKDMFSRA 274
>XP_008445068.1 PREDICTED: ribonuclease H2 subunit B isoform X3 [Cucumis melo]
Length = 277
Score = 227 bits (579), Expect = 6e-69
Identities = 120/277 (43%), Positives = 165/277 (59%), Gaps = 1/277 (0%)
Frame = -2
Query: 1044 KDNRVLIVHSLESDAVGVVNNLGGCFLQLCHPKSGISTTYVLINDSLQELHWFKQQYSSW 865
++ R+LI +G GCFL L HPKSG T ++ +N+ L+E+HWFKQ YSSW
Sbjct: 8 EEKRILIAPDHGVKEIGT-----GCFLSLRHPKSGNPTCFLYVNEMLEEIHWFKQSYSSW 62
Query: 864 FLGNDVCEDGSLYIATPVDPIFIILPLLDKGRMKKGDDPGKFRSLEDILFLEGYPEYRLL 685
FLG+ V EDG LY ATPVDP+FI LP+ ++ RMKKGDDPGKFR L+DI+F+ GYP Y L
Sbjct: 63 FLGDYVTEDGRLYSATPVDPVFIFLPIFEEARMKKGDDPGKFRQLDDIMFINGYPGYLHL 122
Query: 684 YPLMHDLLTAICEVKDVSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDA 505
L + +CEVK+V S ++RLD+ K++AWL KV QL +TL TL+++YA R E +
Sbjct: 123 LSLAEKSMQVVCEVKEVGSSRFFRLDDSKVLAWLYHKVCQLKKTLCTLDKNYAAREEKET 182
Query: 504 VSDAIGFLGEYLKEDPW-XXXXXXXXXXXLETIKKPRMKEPTPMNLAFDSHLDSDLPGSL 328
+SDA+ LGEYLK+ PW E +K E P ++ ++ DS
Sbjct: 183 LSDAVSILGEYLKDQPWLKLLCDHLKLNFAEATRKASDSEKAPTSI--ENKFDSISQDKS 240
Query: 327 KSKGKTTQKNSASRGRPSQKKVDEKGLQKITSMFKKS 217
S K T+ G+ ++K E + I MF K+
Sbjct: 241 WSDAKNTR-----NGKQAKKPKVETESRNIKDMFSKA 272
>XP_013717434.1 PREDICTED: ribonuclease H2 subunit B-like [Brassica napus]
XP_013717435.1 PREDICTED: ribonuclease H2 subunit B-like
[Brassica napus] XP_013717436.1 PREDICTED: ribonuclease
H2 subunit B-like [Brassica napus]
Length = 280
Score = 227 bits (579), Expect = 6e-69
Identities = 118/273 (43%), Positives = 165/273 (60%)
Frame = -2
Query: 1035 RVLIVHSLESDAVGVVNNLGGCFLQLCHPKSGISTTYVLINDSLQELHWFKQQYSSWFLG 856
RVLI SD+ G N G L L HPKS T Y+ N+ LQE+ WFKQ Y SWFLG
Sbjct: 14 RVLIA----SDS-GCGGNKPGELLTLRHPKSDNGTCYLFSNEMLQEIQWFKQSYGSWFLG 68
Query: 855 NDVCEDGSLYIATPVDPIFIILPLLDKGRMKKGDDPGKFRSLEDILFLEGYPEYRLLYPL 676
+ + +DGSLY+ATPVDP+FI+LP+ D+ RMKKG+DPGKFR L++ILF+EGYPEY+ L PL
Sbjct: 69 DYISQDGSLYMATPVDPVFILLPIFDEARMKKGEDPGKFRQLDEILFVEGYPEYQHLLPL 128
Query: 675 MHDLLTAICEVKDVSSMNYYRLDEQKLIAWLCCKVNQLTETLPTLNRHYAGRNESDAVSD 496
+ +C+ ++V SM +YRLD K++AWL CKV+ L +TLP L+++YA + E + D
Sbjct: 129 AEKCMEIVCQTQEVGSMKFYRLDNSKVLAWLSCKVSCLKKTLPELDKNYAAQGEKQTLVD 188
Query: 495 AIGFLGEYLKEDPWXXXXXXXXXXXLETIKKPRMKEPTPMNLAFDSHLDSDLPGSLKSKG 316
A+ +GEYLK +PW P MKE NL + + S++ K
Sbjct: 189 AVSIVGEYLKTEPWLKLLYDHLGL---EFVDPTMKETNTENLPNANENKMEYSNSIQEK- 244
Query: 315 KTTQKNSASRGRPSQKKVDEKGLQKITSMFKKS 217
K + G+ +++ E G + I MF ++
Sbjct: 245 --ATKKTGKPGKQTKQAKVETGSKNIRDMFSRA 275