BLASTX nr result
ID: Ephedra29_contig00016611
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00016611
(834 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABK24854.1 unknown [Picea sitchensis] 195 6e-56
XP_001764534.1 predicted protein [Physcomitrella patens] EDQ7080... 139 4e-35
OCA50780.1 hypothetical protein XENTR_v900026342mg, partial [Xen... 57 7e-06
XP_019367032.1 PREDICTED: probable E3 ubiquitin-protein ligase D... 57 1e-05
XP_019367031.1 PREDICTED: probable E3 ubiquitin-protein ligase D... 57 1e-05
XP_019367030.1 PREDICTED: probable E3 ubiquitin-protein ligase D... 57 1e-05
XP_019367028.1 PREDICTED: probable E3 ubiquitin-protein ligase D... 57 1e-05
XP_019367027.1 PREDICTED: probable E3 ubiquitin-protein ligase D... 57 1e-05
XP_019367026.1 PREDICTED: probable E3 ubiquitin-protein ligase D... 57 1e-05
XP_019367025.1 PREDICTED: probable E3 ubiquitin-protein ligase D... 57 1e-05
>ABK24854.1 unknown [Picea sitchensis]
Length = 452
Score = 195 bits (496), Expect = 6e-56
Identities = 102/249 (40%), Positives = 146/249 (58%), Gaps = 25/249 (10%)
Frame = +3
Query: 162 WKWRSDNVKWIPYDDSTSRAIESAFSKGESSVEFSLDGGHHPSHFIIFMLQPFFQYNVKT 341
W+W++D+++W YD S + AIE+A ++GE SVE S+D G P+ I F Q Q N++T
Sbjct: 48 WQWQTDDLRWRSYDASRTAAIEAAHARGEYSVEISVDQGSTPTCVIYFQNQDLRQVNLRT 107
Query: 342 KRQRTVRRHVTGQCSIPTWQWLEDEINHWHVYDQQLSSVFEAAWQQSATCQTGNS---PA 512
+RQRTVRR+V G+ S WQW E E N WH YD QL+S FE W +S + Q N PA
Sbjct: 108 QRQRTVRRYVNGKGSTAVWQWWESERNCWHRYDDQLASKFETGWLESRSSQRSNKLDFPA 167
Query: 513 GVSFMIKNQQYSLVFDTDGVQYNLNSLAVRSVRRV-------PPTNAA------------ 635
G+ F + Q YSL F+ DG+QY + + RSVRR P ++ A
Sbjct: 168 GLFFKVNGQDYSLSFEADGMQYCVKTSCCRSVRRCTYLPNQQPSSSEALAMKQCHSLNAS 227
Query: 636 --SQAQNSSGQLQQESSCNIDNSLINYCASPSENEECSICLDTLQ-NNSVELMNCHHFFH 806
S Q S + +Q ++ ++S + C +P + E CS+CL +LQ + +VEL CHHFFH
Sbjct: 228 TVSLEQARSNESEQTNTSKDEHSYLIACPNPVDGENCSVCLCSLQEDEAVELAKCHHFFH 287
Query: 807 KHCILEWFQ 833
+ CI +WF+
Sbjct: 288 RECITQWFK 296
>XP_001764534.1 predicted protein [Physcomitrella patens] EDQ70801.1 predicted
protein [Physcomitrella patens]
Length = 412
Score = 139 bits (351), Expect = 4e-35
Identities = 84/255 (32%), Positives = 127/255 (49%), Gaps = 29/255 (11%)
Frame = +3
Query: 156 AVWKWRSDNVKWIPYDDSTSRAIESAFSKGESSVEFSLDGGHHPSHFIIFMLQPFFQYNV 335
AVW+W +D + W PY+ S +IE++F + S++ + P+H I F P Q N
Sbjct: 2 AVWEWLTDAMLWKPYNSVLSDSIEASFQVQQPSLDVCITSPSAPTHSITFQSIPPCQINR 61
Query: 336 KTKRQRTVRRHVTGQCSIPTWQWLEDEINHWHVYDQQLSSVFEAAWQQSATCQT----GN 503
T++ R VRR+V Q I WQW EDE WH YD +SS E AW Q +
Sbjct: 62 NTQQSRPVRRNVDAQSGIAEWQWWEDESQRWHAYDVLISSQIEIAWGQGHNSTNAYFQAS 121
Query: 504 SPAGVSFMIKNQQYSLVFDTDGVQYNLNSLAVRSVRR--VPPTNAAS-----------QA 644
+P GVS I +++Y+++F+ DG+Q NL++ R +RR V P AA+ A
Sbjct: 122 TPGGVSLRIHHRKYTILFEADGLQTNLSTGFSRKIRRRVVSPGTAAAGATPVVPAASPSA 181
Query: 645 QNSSGQLQQES--SCNIDNSLINYCASPS------ENEECSIC----LDTLQNNSVELMN 788
+ S LQ S + ++ ++ P+ EN +C+ C +D N+ L
Sbjct: 182 PHVSSLLQAHSVPAPSVAAGAVSEAYDPADLHPYVENSDCNECPICVMDLRGRNAAMLAK 241
Query: 789 CHHFFHKHCILEWFQ 833
C H F K CI+ WF+
Sbjct: 242 CRHLFCKDCIIRWFE 256
>OCA50780.1 hypothetical protein XENTR_v900026342mg, partial [Xenopus
tropicalis]
Length = 369
Score = 57.4 bits (137), Expect = 7e-06
Identities = 56/194 (28%), Positives = 75/194 (38%), Gaps = 2/194 (1%)
Frame = +3
Query: 162 WKWRSDNVKWIPYDDSTSRAIESAFSKGESSVEFSLDGGHHPSHFIIFMLQPFFQYNVKT 341
W+W D WIP+ S I AFS G+ V S G I +Q Q N +T
Sbjct: 64 WEWEGDGGIWIPFSPELSTQINLAFSSGKRFVTVSPAAGVS----IKVDMQKMVQKNTQT 119
Query: 342 KRQRTVRRHVTGQCSIPTWQWLEDEINHWHVYDQQLSSVFEAAWQQSATCQTGNSPAGVS 521
QR VR V WQW DE W YD EA +Q A VS
Sbjct: 120 GYQRFVRLAVQDCDKYFVWQWWSDE-GDWISYDACTCVALEAGFQSEAKM--------VS 170
Query: 522 FMIKNQQYSLVFDTDGVQYNLNSLAVRSVRRV--PPTNAASQAQNSSGQLQQESSCNIDN 695
+ + Y + +T VQ N + R ++R P++A Q S ++
Sbjct: 171 VSLGGRPYIIDLET-MVQKNSQTEHERQIQRCLSGPSSAPQQKSTISAPAKRSRG---SK 226
Query: 696 SLINYCASPSENEE 737
S+IN EN+E
Sbjct: 227 SVINVEDESEENKE 240
>XP_019367032.1 PREDICTED: probable E3 ubiquitin-protein ligase DTX2 isoform X9
[Gavialis gangeticus]
Length = 549
Score = 57.4 bits (137), Expect = 1e-05
Identities = 52/203 (25%), Positives = 81/203 (39%), Gaps = 14/203 (6%)
Frame = +3
Query: 156 AVWKWRSDNVKWIPYDDSTSRAIESAFSK--------GESSVEFSLDGGHHPSHFIIFM- 308
AVW+W+ + KW PY S IE +F G S+ GH + ++
Sbjct: 22 AVWEWQDEFGKWRPYQGSVCSYIEQSFQASQQKGKRLGPGPANSSIPLGHADAMLAPYVI 81
Query: 309 -LQPFFQYNVKTKRQRTVRRHVTGQCSIP----TWQWLEDEINHWHVYDQQLSSVFEAAW 473
+ Q+ T R VRRH+ Q S W+W DE W Y+ +S E A+
Sbjct: 82 DISSLMQFRQDTGTMRAVRRHLFPQDSAAGQGVIWEWQNDE-GGWSPYEMNVSVFLEQAY 140
Query: 474 QQSATCQTGNSPAGVSFMIKNQQYSLVFDTDGVQYNLNSLAVRSVRRVPPTNAASQAQNS 653
+G+ + + N +L+ VQ N +L RS++R T A +
Sbjct: 141 ------SSGHQHVDLGPLGYNYDINLI---SQVQTNKTTLYRRSIQRRLDTPYPVTA--A 189
Query: 654 SGQLQQESSCNIDNSLINYCASP 722
+G L +C+ L+N P
Sbjct: 190 TGPLHTSMACSCQQCLLNSGTGP 212
>XP_019367031.1 PREDICTED: probable E3 ubiquitin-protein ligase DTX2 isoform X8
[Gavialis gangeticus]
Length = 550
Score = 57.4 bits (137), Expect = 1e-05
Identities = 52/203 (25%), Positives = 81/203 (39%), Gaps = 14/203 (6%)
Frame = +3
Query: 156 AVWKWRSDNVKWIPYDDSTSRAIESAFSK--------GESSVEFSLDGGHHPSHFIIFM- 308
AVW+W+ + KW PY S IE +F G S+ GH + ++
Sbjct: 22 AVWEWQDEFGKWRPYQGSVCSYIEQSFQASQQKGKRLGPGPANSSIPLGHADAMLAPYVI 81
Query: 309 -LQPFFQYNVKTKRQRTVRRHVTGQCSIP----TWQWLEDEINHWHVYDQQLSSVFEAAW 473
+ Q+ T R VRRH+ Q S W+W DE W Y+ +S E A+
Sbjct: 82 DISSLMQFRQDTGTMRAVRRHLFPQDSAAGQGVIWEWQNDE-GGWSPYEMNVSVFLEQAY 140
Query: 474 QQSATCQTGNSPAGVSFMIKNQQYSLVFDTDGVQYNLNSLAVRSVRRVPPTNAASQAQNS 653
+G+ + + N +L+ VQ N +L RS++R T A +
Sbjct: 141 ------SSGHQHVDLGPLGYNYDINLI---SQVQTNKTTLYRRSIQRRLDTPYPVTA--A 189
Query: 654 SGQLQQESSCNIDNSLINYCASP 722
+G L +C+ L+N P
Sbjct: 190 TGPLHTSMACSCQQCLLNSGTGP 212
>XP_019367030.1 PREDICTED: probable E3 ubiquitin-protein ligase DTX2 isoform X7
[Gavialis gangeticus]
Length = 564
Score = 57.4 bits (137), Expect = 1e-05
Identities = 52/203 (25%), Positives = 81/203 (39%), Gaps = 14/203 (6%)
Frame = +3
Query: 156 AVWKWRSDNVKWIPYDDSTSRAIESAFSK--------GESSVEFSLDGGHHPSHFIIFM- 308
AVW+W+ + KW PY S IE +F G S+ GH + ++
Sbjct: 22 AVWEWQDEFGKWRPYQGSVCSYIEQSFQASQQKGKRLGPGPANSSIPLGHADAMLAPYVI 81
Query: 309 -LQPFFQYNVKTKRQRTVRRHVTGQCSIP----TWQWLEDEINHWHVYDQQLSSVFEAAW 473
+ Q+ T R VRRH+ Q S W+W DE W Y+ +S E A+
Sbjct: 82 DISSLMQFRQDTGTMRAVRRHLFPQDSAAGQGVIWEWQNDE-GGWSPYEMNVSVFLEQAY 140
Query: 474 QQSATCQTGNSPAGVSFMIKNQQYSLVFDTDGVQYNLNSLAVRSVRRVPPTNAASQAQNS 653
+G+ + + N +L+ VQ N +L RS++R T A +
Sbjct: 141 ------SSGHQHVDLGPLGYNYDINLI---SQVQTNKTTLYRRSIQRRLDTPYPVTA--A 189
Query: 654 SGQLQQESSCNIDNSLINYCASP 722
+G L +C+ L+N P
Sbjct: 190 TGPLHTSMACSCQQCLLNSGTGP 212
>XP_019367028.1 PREDICTED: probable E3 ubiquitin-protein ligase DTX2 isoform X6
[Gavialis gangeticus]
Length = 565
Score = 57.4 bits (137), Expect = 1e-05
Identities = 52/203 (25%), Positives = 81/203 (39%), Gaps = 14/203 (6%)
Frame = +3
Query: 156 AVWKWRSDNVKWIPYDDSTSRAIESAFSK--------GESSVEFSLDGGHHPSHFIIFM- 308
AVW+W+ + KW PY S IE +F G S+ GH + ++
Sbjct: 22 AVWEWQDEFGKWRPYQGSVCSYIEQSFQASQQKGKRLGPGPANSSIPLGHADAMLAPYVI 81
Query: 309 -LQPFFQYNVKTKRQRTVRRHVTGQCSIP----TWQWLEDEINHWHVYDQQLSSVFEAAW 473
+ Q+ T R VRRH+ Q S W+W DE W Y+ +S E A+
Sbjct: 82 DISSLMQFRQDTGTMRAVRRHLFPQDSAAGQGVIWEWQNDE-GGWSPYEMNVSVFLEQAY 140
Query: 474 QQSATCQTGNSPAGVSFMIKNQQYSLVFDTDGVQYNLNSLAVRSVRRVPPTNAASQAQNS 653
+G+ + + N +L+ VQ N +L RS++R T A +
Sbjct: 141 ------SSGHQHVDLGPLGYNYDINLI---SQVQTNKTTLYRRSIQRRLDTPYPVTA--A 189
Query: 654 SGQLQQESSCNIDNSLINYCASP 722
+G L +C+ L+N P
Sbjct: 190 TGPLHTSMACSCQQCLLNSGTGP 212
>XP_019367027.1 PREDICTED: probable E3 ubiquitin-protein ligase DTX2 isoform X5
[Gavialis gangeticus]
Length = 579
Score = 57.4 bits (137), Expect = 1e-05
Identities = 52/203 (25%), Positives = 81/203 (39%), Gaps = 14/203 (6%)
Frame = +3
Query: 156 AVWKWRSDNVKWIPYDDSTSRAIESAFSK--------GESSVEFSLDGGHHPSHFIIFM- 308
AVW+W+ + KW PY S IE +F G S+ GH + ++
Sbjct: 22 AVWEWQDEFGKWRPYQGSVCSYIEQSFQASQQKGKRLGPGPANSSIPLGHADAMLAPYVI 81
Query: 309 -LQPFFQYNVKTKRQRTVRRHVTGQCSIP----TWQWLEDEINHWHVYDQQLSSVFEAAW 473
+ Q+ T R VRRH+ Q S W+W DE W Y+ +S E A+
Sbjct: 82 DISSLMQFRQDTGTMRAVRRHLFPQDSAAGQGVIWEWQNDE-GGWSPYEMNVSVFLEQAY 140
Query: 474 QQSATCQTGNSPAGVSFMIKNQQYSLVFDTDGVQYNLNSLAVRSVRRVPPTNAASQAQNS 653
+G+ + + N +L+ VQ N +L RS++R T A +
Sbjct: 141 ------SSGHQHVDLGPLGYNYDINLI---SQVQTNKTTLYRRSIQRRLDTPYPVTA--A 189
Query: 654 SGQLQQESSCNIDNSLINYCASP 722
+G L +C+ L+N P
Sbjct: 190 TGPLHTSMACSCQQCLLNSGTGP 212
>XP_019367026.1 PREDICTED: probable E3 ubiquitin-protein ligase DTX2 isoform X4
[Gavialis gangeticus]
Length = 593
Score = 57.4 bits (137), Expect = 1e-05
Identities = 52/203 (25%), Positives = 81/203 (39%), Gaps = 14/203 (6%)
Frame = +3
Query: 156 AVWKWRSDNVKWIPYDDSTSRAIESAFSK--------GESSVEFSLDGGHHPSHFIIFM- 308
AVW+W+ + KW PY S IE +F G S+ GH + ++
Sbjct: 22 AVWEWQDEFGKWRPYQGSVCSYIEQSFQASQQKGKRLGPGPANSSIPLGHADAMLAPYVI 81
Query: 309 -LQPFFQYNVKTKRQRTVRRHVTGQCSIP----TWQWLEDEINHWHVYDQQLSSVFEAAW 473
+ Q+ T R VRRH+ Q S W+W DE W Y+ +S E A+
Sbjct: 82 DISSLMQFRQDTGTMRAVRRHLFPQDSAAGQGVIWEWQNDE-GGWSPYEMNVSVFLEQAY 140
Query: 474 QQSATCQTGNSPAGVSFMIKNQQYSLVFDTDGVQYNLNSLAVRSVRRVPPTNAASQAQNS 653
+G+ + + N +L+ VQ N +L RS++R T A +
Sbjct: 141 ------SSGHQHVDLGPLGYNYDINLI---SQVQTNKTTLYRRSIQRRLDTPYPVTA--A 189
Query: 654 SGQLQQESSCNIDNSLINYCASP 722
+G L +C+ L+N P
Sbjct: 190 TGPLHTSMACSCQQCLLNSGTGP 212
>XP_019367025.1 PREDICTED: probable E3 ubiquitin-protein ligase DTX2 isoform X3
[Gavialis gangeticus]
Length = 594
Score = 57.4 bits (137), Expect = 1e-05
Identities = 52/203 (25%), Positives = 81/203 (39%), Gaps = 14/203 (6%)
Frame = +3
Query: 156 AVWKWRSDNVKWIPYDDSTSRAIESAFSK--------GESSVEFSLDGGHHPSHFIIFM- 308
AVW+W+ + KW PY S IE +F G S+ GH + ++
Sbjct: 22 AVWEWQDEFGKWRPYQGSVCSYIEQSFQASQQKGKRLGPGPANSSIPLGHADAMLAPYVI 81
Query: 309 -LQPFFQYNVKTKRQRTVRRHVTGQCSIP----TWQWLEDEINHWHVYDQQLSSVFEAAW 473
+ Q+ T R VRRH+ Q S W+W DE W Y+ +S E A+
Sbjct: 82 DISSLMQFRQDTGTMRAVRRHLFPQDSAAGQGVIWEWQNDE-GGWSPYEMNVSVFLEQAY 140
Query: 474 QQSATCQTGNSPAGVSFMIKNQQYSLVFDTDGVQYNLNSLAVRSVRRVPPTNAASQAQNS 653
+G+ + + N +L+ VQ N +L RS++R T A +
Sbjct: 141 ------SSGHQHVDLGPLGYNYDINLI---SQVQTNKTTLYRRSIQRRLDTPYPVTA--A 189
Query: 654 SGQLQQESSCNIDNSLINYCASP 722
+G L +C+ L+N P
Sbjct: 190 TGPLHTSMACSCQQCLLNSGTGP 212