BLASTX nr result
ID: Ephedra29_contig00016467
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00016467
(949 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EMT18381.1 hypothetical protein F775_05587 [Aegilops tauschii] 172 2e-47
BAK05919.1 predicted protein, partial [Hordeum vulgare subsp. vu... 171 9e-46
JAT40878.1 Pentatricopeptide repeat-containing protein At5g18475... 172 1e-45
EMS58286.1 hypothetical protein TRIUR3_03222 [Triticum urartu] 167 2e-45
XP_020177558.1 pentatricopeptide repeat-containing protein At5g1... 172 2e-45
XP_008649234.1 PREDICTED: pentatricopeptide repeat-containing pr... 169 3e-45
XP_004964862.1 PREDICTED: pentatricopeptide repeat-containing pr... 169 3e-45
KQK18990.1 hypothetical protein BRADI_1g45780 [Brachypodium dist... 166 1e-44
XP_002438057.1 hypothetical protein SORBIDRAFT_10g007440 [Sorghu... 166 6e-44
XP_003564089.1 PREDICTED: pentatricopeptide repeat-containing pr... 166 9e-44
XP_002283907.4 PREDICTED: pentatricopeptide repeat-containing pr... 165 2e-43
KCW88327.1 hypothetical protein EUGRSUZ_A00716 [Eucalyptus grandis] 163 3e-43
XP_010942656.2 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide... 163 7e-43
XP_010043082.1 PREDICTED: pentatricopeptide repeat-containing pr... 163 1e-42
XP_016569086.1 PREDICTED: pentatricopeptide repeat-containing pr... 162 2e-42
XP_009629855.1 PREDICTED: pentatricopeptide repeat-containing pr... 161 4e-42
5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 159 9e-42
5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide ... 159 9e-42
XP_004237977.1 PREDICTED: pentatricopeptide repeat-containing pr... 160 1e-41
XP_009795490.1 PREDICTED: pentatricopeptide repeat-containing pr... 160 1e-41
>EMT18381.1 hypothetical protein F775_05587 [Aegilops tauschii]
Length = 363
Score = 172 bits (436), Expect = 2e-47
Identities = 97/293 (33%), Positives = 157/293 (53%), Gaps = 4/293 (1%)
Frame = -3
Query: 947 DMERAFGVLHRMGGYMCA---PNIITYTPFMNCLIRLGQNGDALCMFRNMI-LEGIVPDA 780
D E AF VL M Y C PN++TY+ + L R G+ +A +F MI + IVPD
Sbjct: 64 DSETAFRVLDEMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEAFELFEGMIEKDHIVPDQ 123
Query: 779 FCYGILINMYLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGL 600
Y +LIN + + KA + MRK++C PN ++ +N + K + A VF
Sbjct: 124 LTYNVLINGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLINGHCKKGEVENAKLVFEE 183
Query: 599 MMKTGFTPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDR 420
M G PDA +YT +I LC+ G+VD+ +D++ +M+ +GC DVV YNL++ GLCK R
Sbjct: 184 MRTAGVEPDAVSYTALIGCLCRHGSVDEGIDLLMEMREKGCKADVVTYNLLLEGLCKDGR 243
Query: 419 FEEVDGILDRILKNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNP 240
EV +L R+ + G + +Y I+++ L + GD +AV + + N
Sbjct: 244 MAEVMDLLGRLPEEGVQLNVASYRIVMNTLCSSGDMEKAVGLLGLMLRRGFLPHYAASNK 303
Query: 239 LVSGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVL 81
L+ GL +VG++ + + L GF P + W ++ AVC +++L ++ ++L
Sbjct: 304 LLIGLCDVGQVADATAALYGLAKFGFMPEASCWAKLIEAVCRDRKLRRSVELL 356
Score = 67.8 bits (164), Expect = 4e-09
Identities = 36/181 (19%), Positives = 85/181 (46%), Gaps = 4/181 (2%)
Frame = -3
Query: 578 PDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCP---PDVVPYNLIIAGLCKMDRFEEV 408
P+ Y +I H K G + A ++++M+ C P++V Y+ ++ GLC+ + +E
Sbjct: 47 PNTCVYNILIKHYIKNGDSETAFRVLDEMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEA 106
Query: 407 DGILDRIL-KNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLVS 231
+ + ++ K+ PD++TY +LI+ +G +A F ++ + L++
Sbjct: 107 FELFEGMIEKDHIVPDQLTYNVLINGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLIN 166
Query: 230 GLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVLMKVWKSSSKE 51
G G+++ V + + G P ++ ++ +C + + +LM++ + K
Sbjct: 167 GHCKKGEVENAKLVFEEMRTAGVEPDAVSYTALIGCLCRHGSVDEGIDLLMEMREKGCKA 226
Query: 50 E 48
+
Sbjct: 227 D 227
>BAK05919.1 predicted protein, partial [Hordeum vulgare subsp. vulgare]
Length = 523
Score = 171 bits (434), Expect = 9e-46
Identities = 100/299 (33%), Positives = 160/299 (53%), Gaps = 10/299 (3%)
Frame = -3
Query: 947 DMERAFGVLHRMGGYMCA---PNIITYTPFMNCLIRLGQNGDALCMFRNMI-LEGIVPDA 780
D E AF VL M Y C PN++TY+ + L R G+ +A +F MI + IVPD
Sbjct: 224 DSETAFRVLDEMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEAFELFEGMIEKDHIVPDQ 283
Query: 779 FCYGILINMYLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGL 600
Y ++I+ + + KA + MRK++C PN ++ +N + K + A VF
Sbjct: 284 LTYNVIIDGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLINGHCKKGDVENAKLVFEE 343
Query: 599 MMKTGFTPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDR 420
M G PDA +YT +I LC+ G+VD+ +D+V +M+ +GC DVV YNL++ GLCK R
Sbjct: 344 MRSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVMEMREKGCKADVVTYNLLLEGLCKDGR 403
Query: 419 FEEVDGILDRILKNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTL-- 246
EV +L R+ + G + +Y I+++ L + GD +A V L + LG L
Sbjct: 404 MAEVMDLLGRLPEEGVQLNVASYRIVMNTLCSSGDMEKA------VGLLGLMLGRGFLPH 457
Query: 245 ----NPLVSGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVL 81
N L+ GL +VG++ + + L GF P + W ++ AVC +++L ++ ++L
Sbjct: 458 YAASNKLLIGLCDVGRVADATAALYGLAKFGFMPEASCWAKLIEAVCRDRKLRRSVELL 516
Score = 65.5 bits (158), Expect = 3e-08
Identities = 34/181 (18%), Positives = 83/181 (45%), Gaps = 4/181 (2%)
Frame = -3
Query: 578 PDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCP---PDVVPYNLIIAGLCKMDRFEEV 408
P+ Y +I H K G + A ++++M+ C P++V Y+ ++ GLC+ + +E
Sbjct: 207 PNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEA 266
Query: 407 DGILDRIL-KNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLVS 231
+ + ++ K+ PD++TY ++I +G +A F ++ + L++
Sbjct: 267 FELFEGMIEKDHIVPDQLTYNVIIDGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLIN 326
Query: 230 GLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVLMKVWKSSSKE 51
G G ++ V + + G P ++ ++ +C + + ++M++ + K
Sbjct: 327 GHCKKGDVENAKLVFEEMRSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVMEMREKGCKA 386
Query: 50 E 48
+
Sbjct: 387 D 387
>JAT40878.1 Pentatricopeptide repeat-containing protein At5g18475, partial
[Anthurium amnicola]
Length = 572
Score = 172 bits (435), Expect = 1e-45
Identities = 100/302 (33%), Positives = 166/302 (54%), Gaps = 10/302 (3%)
Frame = -3
Query: 947 DMERAFGVLHRM------GGY---MCAPNIITYTPFMNCLIRLGQNGDALCMFRNMILEG 795
D++ AFGVL M GG APN +TY+ M L +G+ +AL +F MI G
Sbjct: 267 DLDSAFGVLSEMREKASNGGSKATFAAPNRVTYSTLMGGLCGVGKLKEALQLFEEMIDSG 326
Query: 794 -IVPDAFCYGILINMYLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGA 618
IVPD Y +LI+ + + + KA +L M+++ C PN V S+ +N + K + A
Sbjct: 327 GIVPDVLTYNVLIDGFCKNGKVDKARQILGFMQRNGCEPNVVNYSTLMNGFCKEGRVEEA 386
Query: 617 LSVFGLMMKTGFTPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPDVVPYNLIIAG 438
+F M ++ PDA +YT +IS LCK VD+ +++V +M+ +GC DVV +N++I+G
Sbjct: 387 RQLFEEMRRSRLQPDAVSYTTLISCLCKNSRVDEGVELVTEMREKGCRADVVTFNVVISG 446
Query: 437 LCKMDRFEEVDGILDRILKNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLG 258
LCK R E G+L+++ G +K +Y I+++ L G+ +AV + +++
Sbjct: 447 LCKEGRVSEAMGLLEKLPGQGVKLNKASYRIVMNFLCTEGEMERAVALLGLMFGRRVLPH 506
Query: 257 NRTLNPLVSGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVLM 78
T N L+ L GKI + + L+ GF P + +W +V ++C E++L K+ +L
Sbjct: 507 FATSNELLVKLCEAGKIADATMALCGLVEMGFMPEVGSWVGLVESICRERKLSKSFDLLD 566
Query: 77 KV 72
K+
Sbjct: 567 KL 568
Score = 112 bits (281), Expect = 3e-24
Identities = 71/249 (28%), Positives = 118/249 (47%), Gaps = 10/249 (4%)
Frame = -3
Query: 797 GIVPDAFCYGILINMYLEGELIHKAMGVLELMRKHD---------CPPNRVVLSSFLNAY 645
G+ P+A Y I I ++ + A GVL MR+ PNRV S+ +
Sbjct: 247 GVSPNACMYNIFIKLHCRTGDLDSAFGVLSEMREKASNGGSKATFAAPNRVTYSTLMGGL 306
Query: 644 AKYSFIPGALSVFGLMMKT-GFTPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPD 468
+ AL +F M+ + G PD Y +I CK G VD+A I+ M+ GC P+
Sbjct: 307 CGVGKLKEALQLFEEMIDSGGIVPDVLTYNVLIDGFCKNGKVDKARQILGFMQRNGCEPN 366
Query: 467 VVPYNLIIAGLCKMDRFEEVDGILDRILKNGCTPDKITYEILISHLVNMGDFSQAVVFFE 288
VV Y+ ++ G CK R EE + + + ++ PD ++Y LIS L + V
Sbjct: 367 VVNYSTLMNGFCKEGRVEEARQLFEEMRRSRLQPDAVSYTTLISCLCKNSRVDEGVELVT 426
Query: 287 WVNLKKIRLGNRTLNPLVSGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEK 108
+ K R T N ++SGL G++ E +++ L G+G ++ +++ +C+E
Sbjct: 427 EMREKGCRADVVTFNVVISGLCKEGRVSEAMGLLEKLPGQGVKLNKASYRIVMNFLCTEG 486
Query: 107 ELGKAAKVL 81
E+ +A +L
Sbjct: 487 EMERAVALL 495
>EMS58286.1 hypothetical protein TRIUR3_03222 [Triticum urartu]
Length = 363
Score = 167 bits (422), Expect = 2e-45
Identities = 94/293 (32%), Positives = 156/293 (53%), Gaps = 4/293 (1%)
Frame = -3
Query: 947 DMERAFGVLHRMGGYMCA---PNIITYTPFMNCLIRLGQNGDALCMFRNMI-LEGIVPDA 780
D E AF VL M Y C PN++TY+ + L R G+ +A +F MI + IVPD
Sbjct: 64 DSETAFRVLDEMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEAFELFEGMIEKDHIVPDQ 123
Query: 779 FCYGILINMYLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGL 600
Y ++I+ + + KA + MRK++C PN ++ +N + K + A VF
Sbjct: 124 LTYNLIIDGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLINGHCKKGEVEDAKLVFEE 183
Query: 599 MMKTGFTPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDR 420
M G PDA +YT +I LC+ G VD+ ++++ +M+ +GC DVV YNL++ GLCK R
Sbjct: 184 MRTAGVEPDAVSYTALIGCLCRHGTVDEGINLLMEMREKGCKADVVTYNLLLEGLCKDGR 243
Query: 419 FEEVDGILDRILKNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNP 240
EV +L R+ + G + +Y I+++ L + GD +AV + + N
Sbjct: 244 MAEVMDLLGRLPEEGVQLNVASYRIVMNTLCSSGDMEKAVGLLGLMLRRGFLPHYAASNK 303
Query: 239 LVSGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVL 81
L+ GL +VG++ + + L GF P + W ++ AVC +++L ++ ++L
Sbjct: 304 LLIGLCDVGRVADATAALYGLAKFGFMPEASCWAKLIEAVCRDRKLRRSVELL 356
Score = 67.0 bits (162), Expect = 7e-09
Identities = 35/181 (19%), Positives = 85/181 (46%), Gaps = 4/181 (2%)
Frame = -3
Query: 578 PDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCP---PDVVPYNLIIAGLCKMDRFEEV 408
P+ Y +I H K G + A ++++M+ C P++V Y+ ++ GLC+ + +E
Sbjct: 47 PNTCVYNILIKHYIKNGDSETAFRVLDEMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEA 106
Query: 407 DGILDRIL-KNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLVS 231
+ + ++ K+ PD++TY ++I +G +A F ++ + L++
Sbjct: 107 FELFEGMIEKDHIVPDQLTYNLIIDGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLIN 166
Query: 230 GLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVLMKVWKSSSKE 51
G G++++ V + + G P ++ ++ +C + + +LM++ + K
Sbjct: 167 GHCKKGEVEDAKLVFEEMRTAGVEPDAVSYTALIGCLCRHGTVDEGINLLMEMREKGCKA 226
Query: 50 E 48
+
Sbjct: 227 D 227
>XP_020177558.1 pentatricopeptide repeat-containing protein At5g18475-like [Aegilops
tauschii subsp. tauschii]
Length = 635
Score = 172 bits (436), Expect = 2e-45
Identities = 97/293 (33%), Positives = 157/293 (53%), Gaps = 4/293 (1%)
Frame = -3
Query: 947 DMERAFGVLHRMGGYMCA---PNIITYTPFMNCLIRLGQNGDALCMFRNMI-LEGIVPDA 780
D E AF VL M Y C PN++TY+ + L R G+ +A +F MI + IVPD
Sbjct: 336 DSETAFRVLDEMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEAFELFEGMIEKDHIVPDQ 395
Query: 779 FCYGILINMYLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGL 600
Y +LIN + + KA + MRK++C PN ++ +N + K + A VF
Sbjct: 396 LTYNVLINGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLINGHCKKGEVENAKLVFEE 455
Query: 599 MMKTGFTPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDR 420
M G PDA +YT +I LC+ G+VD+ +D++ +M+ +GC DVV YNL++ GLCK R
Sbjct: 456 MRTAGVEPDAVSYTALIGCLCRHGSVDEGIDLLMEMREKGCKADVVTYNLLLEGLCKDGR 515
Query: 419 FEEVDGILDRILKNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNP 240
EV +L R+ + G + +Y I+++ L + GD +AV + + N
Sbjct: 516 MAEVMDLLGRLPEEGVQLNVASYRIVMNTLCSSGDMEKAVGLLGLMLRRGFLPHYAASNK 575
Query: 239 LVSGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVL 81
L+ GL +VG++ + + L GF P + W ++ AVC +++L ++ ++L
Sbjct: 576 LLIGLCDVGQVADATAALYGLAKFGFMPEASCWAKLIEAVCRDRKLRRSVELL 628
Score = 67.8 bits (164), Expect = 6e-09
Identities = 36/181 (19%), Positives = 85/181 (46%), Gaps = 4/181 (2%)
Frame = -3
Query: 578 PDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCP---PDVVPYNLIIAGLCKMDRFEEV 408
P+ Y +I H K G + A ++++M+ C P++V Y+ ++ GLC+ + +E
Sbjct: 319 PNTCVYNILIKHYIKNGDSETAFRVLDEMREYTCGDVRPNLVTYSTLLGGLCRAGKMKEA 378
Query: 407 DGILDRIL-KNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLVS 231
+ + ++ K+ PD++TY +LI+ +G +A F ++ + L++
Sbjct: 379 FELFEGMIEKDHIVPDQLTYNVLINGFCRLGQVEKARTIFGFMRKNECEPNAFNYATLIN 438
Query: 230 GLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVLMKVWKSSSKE 51
G G+++ V + + G P ++ ++ +C + + +LM++ + K
Sbjct: 439 GHCKKGEVENAKLVFEEMRTAGVEPDAVSYTALIGCLCRHGSVDEGIDLLMEMREKGCKA 498
Query: 50 E 48
+
Sbjct: 499 D 499
>XP_008649234.1 PREDICTED: pentatricopeptide repeat-containing protein At5g18475 [Zea
mays] AQK83252.1 Pentatricopeptide repeat-containing
protein [Zea mays]
Length = 496
Score = 169 bits (429), Expect = 3e-45
Identities = 103/299 (34%), Positives = 160/299 (53%), Gaps = 10/299 (3%)
Frame = -3
Query: 947 DMERAFGVLHRMGGYMCA---PNIITYTPFMNCLIRLGQNGDALCMFRNMI-LEGIVPDA 780
++E AF VL M Y CA PN++TY+ + L R G+ +A +F MI + IVPD
Sbjct: 197 ELETAFKVLDEMREYTCADVKPNLVTYSTLIGGLCRGGKMKEAFELFEEMIEKDRIVPDQ 256
Query: 779 FCYGILINMYLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGL 600
Y ++I+ + + KA + MRK++C PN ++ +N + K + I A SVF
Sbjct: 257 LLYNVIIDGFCRQGQVDKARAIFGFMRKNECEPNTFNYATLINGHCKKADIEAARSVFEE 316
Query: 599 MMKTGFTPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDR 420
M +G PDA +YT +I LC+ G+VD+ + +V +MK +GC DVV YNL+I GLCK R
Sbjct: 317 MRNSGVEPDAVSYTALIGCLCRHGSVDEGIGLVLEMKEKGCRADVVTYNLVIEGLCKDGR 376
Query: 419 FEEVDGILDRILKNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTL-- 246
E G+L+ + G + +Y IL++ L + G+ +A V L + LG L
Sbjct: 377 TVEAMGLLESVPLEGVKLNVASYRILMNCLCSRGEMDRA------VGLLGLMLGRGFLPH 430
Query: 245 ----NPLVSGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVL 81
N L+ GL + G+I + + L GF P WE +V +VC E++ ++ +L
Sbjct: 431 YAASNNLLIGLCDAGRIADATMALYGLADAGFMPEPRCWERLVESVCRERKQRRSTDLL 489
Score = 67.4 bits (163), Expect = 7e-09
Identities = 58/276 (21%), Positives = 113/276 (40%), Gaps = 4/276 (1%)
Frame = -3
Query: 887 IITYTPFMNCLIRLGQNGDALCMFRNMILEGIVPDAFCYGILINMYLEGELIHKAMGVLE 708
++ + P + R+ A+C+ R +V C+G+L + + + +
Sbjct: 127 LLRFLPALLRTSRVSHKALAVCLDR------LVSSRGCHGVLNELLAD---------LRD 171
Query: 707 LMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMMK---TGFTPDATAYTPIISHLC 537
K+ PN V + + Y K + A V M + P+ Y+ +I LC
Sbjct: 172 PRNKYLPRPNTCVYNILVKHYVKNGELETAFKVLDEMREYTCADVKPNLVTYSTLIGGLC 231
Query: 536 KQGAVDQALDIVEKM-KGEGCPPDVVPYNLIIAGLCKMDRFEEVDGILDRILKNGCTPDK 360
+ G + +A ++ E+M + + PD + YN+II G C+ + ++ I + KN C P+
Sbjct: 232 RGGKMKEAFELFEEMIEKDRIVPDQLLYNVIIDGFCRQGQVDKARAIFGFMRKNECEPNT 291
Query: 359 ITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLVSGLANVGKIKELGRVVDT 180
Y LI+ D A FE + + + L+ L G + E +V
Sbjct: 292 FNYATLINGHCKKADIEAARSVFEEMRNSGVEPDAVSYTALIGCLCRHGSVDEGIGLVLE 351
Query: 179 LLGEGFTPYLTTWECMVSAVCSEKELGKAAKVLMKV 72
+ +G + T+ ++ +C + +A +L V
Sbjct: 352 MKEKGCRADVVTYNLVIEGLCKDGRTVEAMGLLESV 387
>XP_004964862.1 PREDICTED: pentatricopeptide repeat-containing protein At5g18475
[Setaria italica] KQL09777.1 hypothetical protein
SETIT_008546mg [Setaria italica]
Length = 503
Score = 169 bits (429), Expect = 3e-45
Identities = 97/293 (33%), Positives = 158/293 (53%), Gaps = 4/293 (1%)
Frame = -3
Query: 947 DMERAFGVLHRMGGYMCA---PNIITYTPFMNCLIRLGQNGDALCMFRNMI-LEGIVPDA 780
++E AF VL M Y CA PN++TY+ + L R G+ +A +F +MI + IVPD
Sbjct: 204 ELETAFKVLDEMREYTCADVKPNLVTYSTLIGGLCRGGKMKEAFDLFEDMIEKDRIVPDQ 263
Query: 779 FCYGILINMYLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGL 600
Y ++I+ + + + KA + MRK++C PN ++ +N + K I A SVF
Sbjct: 264 LLYNVIIDGFCKLGQVEKAHAIFGFMRKNECEPNAFNYATLINGHCKKGDIQAARSVFEE 323
Query: 599 MMKTGFTPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDR 420
M G PDA +YT +I LC+ G+VD+ +++V +MKG+GC DVV YNL+I GLCK R
Sbjct: 324 MASAGVEPDAVSYTALIGCLCRHGSVDEGINLVLEMKGKGCKADVVTYNLVIEGLCKDGR 383
Query: 419 FEEVDGILDRILKNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNP 240
E +L+ + G + +Y I+++ L + G+ +AV + + N
Sbjct: 384 MMEAMDLLESVPLEGVQLNVASYRIVMNCLCSRGEMDKAVGLLGLMLGRGFVPHYAASNN 443
Query: 239 LVSGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVL 81
L+ GL + G++ + L GF P + WE +V VC E++ ++ ++L
Sbjct: 444 LLIGLCDAGRLANATMALYGLADMGFVPEASCWEKLVETVCRERKQRRSTELL 496
>KQK18990.1 hypothetical protein BRADI_1g45780 [Brachypodium distachyon]
Length = 393
Score = 166 bits (419), Expect = 1e-44
Identities = 99/299 (33%), Positives = 156/299 (52%), Gaps = 10/299 (3%)
Frame = -3
Query: 947 DMERAFGVLHRMGGYMCA---PNIITYTPFMNCLIRLGQNGDALCMFRNMI-LEGIVPDA 780
D E AF VL M Y C PN++TY+ + L R G+ +A +F MI + IVPD
Sbjct: 94 DSETAFRVLDEMREYTCGDVRPNLVTYSTLIGGLCRAGKMKEAFELFEEMIEKDHIVPDQ 153
Query: 779 FCYGILINMYLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGL 600
Y ++IN + + KA + MRK++C PN ++ +N +++ + VF
Sbjct: 154 LTYNVIINGFCRLGQVDKARTIFGFMRKNECEPNAFNYATLMNGHSRKGELENLRMVFEE 213
Query: 599 MMKTGFTPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDR 420
M G PDA +YT +I LC+ G+VD+ +D+V +M+ +GC DVV YNL+I GLCK R
Sbjct: 214 MKSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVREMREKGCKADVVTYNLLIEGLCKDKR 273
Query: 419 FEEVDGILDRILKNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTL-- 246
E +L + G + +Y I+++ L + GD +A V L + LG L
Sbjct: 274 MVEAMDLLRSLPLEGVQLNVASYRIVMNSLCSCGDMEKA------VGLLGLMLGRGFLPH 327
Query: 245 ----NPLVSGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVL 81
N L+ GL VG++ + + L GF P + W +V AVC +++L ++ ++L
Sbjct: 328 YAASNDLLIGLCGVGRVADATVALYGLASVGFKPDTSCWGKLVEAVCRDRKLRRSVELL 386
Score = 69.3 bits (168), Expect = 1e-09
Identities = 36/182 (19%), Positives = 87/182 (47%), Gaps = 4/182 (2%)
Frame = -3
Query: 581 TPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCP---PDVVPYNLIIAGLCKMDRFEE 411
TP+ Y +I H K G + A ++++M+ C P++V Y+ +I GLC+ + +E
Sbjct: 76 TPNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRPNLVTYSTLIGGLCRAGKMKE 135
Query: 410 VDGILDRIL-KNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLV 234
+ + ++ K+ PD++TY ++I+ +G +A F ++ + L+
Sbjct: 136 AFELFEEMIEKDHIVPDQLTYNVIINGFCRLGQVDKARTIFGFMRKNECEPNAFNYATLM 195
Query: 233 SGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVLMKVWKSSSK 54
+G + G+++ L V + + G P ++ ++ +C + + ++ ++ + K
Sbjct: 196 NGHSRKGELENLRMVFEEMKSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVREMREKGCK 255
Query: 53 EE 48
+
Sbjct: 256 AD 257
Score = 60.8 bits (146), Expect = 8e-07
Identities = 42/191 (21%), Positives = 78/191 (40%)
Frame = -3
Query: 947 DMERAFGVLHRMGGYMCAPNIITYTPFMNCLIRLGQNGDALCMFRNMILEGIVPDAFCYG 768
++E V M P+ ++YT + CL R G + + + R M +G D Y
Sbjct: 203 ELENLRMVFEEMKSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVREMREKGCKADVVTYN 262
Query: 767 ILINMYLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMMKT 588
+LI + + + +AM +L + N +N+ + A+ + GLM+
Sbjct: 263 LLIEGLCKDKRMVEAMDLLRSLPLEGVQLNVASYRIVMNSLCSCGDMEKAVGLLGLMLGR 322
Query: 587 GFTPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDRFEEV 408
GF P A ++ LC G V A + + G PD + ++ +C+ +
Sbjct: 323 GFLPHYAASNDLLIGLCGVGRVADATVALYGLASVGFKPDTSCWGKLVEAVCRDRKLRRS 382
Query: 407 DGILDRILKNG 375
+LD ++ G
Sbjct: 383 VELLDVLITEG 393
>XP_002438057.1 hypothetical protein SORBIDRAFT_10g007440 [Sorghum bicolor]
EER89424.1 hypothetical protein SORBI_010G085900 [Sorghum
bicolor]
Length = 499
Score = 166 bits (420), Expect = 6e-44
Identities = 101/299 (33%), Positives = 160/299 (53%), Gaps = 10/299 (3%)
Frame = -3
Query: 947 DMERAFGVLHRMGGYMCA---PNIITYTPFMNCLIRLGQNGDALCMFRNMI-LEGIVPDA 780
++E AF VL M Y CA PN++TY+ + L R G+ +A +F MI + IVPD
Sbjct: 200 ELETAFKVLDEMREYTCADVKPNLVTYSTLIAGLCRGGKMMEAFELFEEMIEKDRIVPDQ 259
Query: 779 FCYGILINMYLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGL 600
Y ++I+ + + KA + M+K+DC PN ++ +N + K + I A SVF
Sbjct: 260 LLYNVIIDGFCRLGQVDKARAIFGFMKKNDCEPNAFNYATLINGHCKKADIEAARSVFEE 319
Query: 599 MMKTGFTPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDR 420
M G PDA +YT +I LC+ G+VD+A+++V +MK +GC DVV YNL+I GLC+ R
Sbjct: 320 MRNAGVEPDAVSYTALIGCLCRHGSVDEAINLVLEMKQKGCRADVVTYNLVIEGLCRDGR 379
Query: 419 FEEVDGILDRILKNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTL-- 246
E +L+ + G + +Y IL++ L + G+ +A V L + LG L
Sbjct: 380 TVEAMDLLESVPLEGVKLNVASYRILMNCLCSRGEMDKA------VGLLGLMLGRGFLPH 433
Query: 245 ----NPLVSGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVL 81
N L+ GL + G+I + + L GF P WE +V +C E++ ++ ++L
Sbjct: 434 YAASNNLLIGLCDAGRIADATMALYGLADAGFMPEARCWERLVETMCRERKQRRSTELL 492
Score = 67.4 bits (163), Expect = 7e-09
Identities = 56/276 (20%), Positives = 115/276 (41%), Gaps = 4/276 (1%)
Frame = -3
Query: 887 IITYTPFMNCLIRLGQNGDALCMFRNMILEGIVPDAFCYGILINMYLEGELIHKAMGVLE 708
++ + P + R+ A+C+ R +V C+G+L + + + +
Sbjct: 130 LLRFLPALLRTSRVSHKALAVCLDR------LVSSRGCHGVLDELLSD---------LRD 174
Query: 707 LMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMMK---TGFTPDATAYTPIISHLC 537
K+ PN V + + + + + A V M + P+ Y+ +I+ LC
Sbjct: 175 PRNKYLPRPNTCVYNILIKHFVRIGELETAFKVLDEMREYTCADVKPNLVTYSTLIAGLC 234
Query: 536 KQGAVDQALDIVEKM-KGEGCPPDVVPYNLIIAGLCKMDRFEEVDGILDRILKNGCTPDK 360
+ G + +A ++ E+M + + PD + YN+II G C++ + ++ I + KN C P+
Sbjct: 235 RGGKMMEAFELFEEMIEKDRIVPDQLLYNVIIDGFCRLGQVDKARAIFGFMKKNDCEPNA 294
Query: 359 ITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLVSGLANVGKIKELGRVVDT 180
Y LI+ D A FE + + + L+ L G + E +V
Sbjct: 295 FNYATLINGHCKKADIEAARSVFEEMRNAGVEPDAVSYTALIGCLCRHGSVDEAINLVLE 354
Query: 179 LLGEGFTPYLTTWECMVSAVCSEKELGKAAKVLMKV 72
+ +G + T+ ++ +C + +A +L V
Sbjct: 355 MKQKGCRADVVTYNLVIEGLCRDGRTVEAMDLLESV 390
>XP_003564089.1 PREDICTED: pentatricopeptide repeat-containing protein At5g18475
[Brachypodium distachyon] XP_010227853.1 PREDICTED:
pentatricopeptide repeat-containing protein At5g18475
[Brachypodium distachyon] XP_010227854.1 PREDICTED:
pentatricopeptide repeat-containing protein At5g18475
[Brachypodium distachyon] XP_014752386.1 PREDICTED:
pentatricopeptide repeat-containing protein At5g18475
[Brachypodium distachyon]
Length = 502
Score = 166 bits (419), Expect = 9e-44
Identities = 99/299 (33%), Positives = 156/299 (52%), Gaps = 10/299 (3%)
Frame = -3
Query: 947 DMERAFGVLHRMGGYMCA---PNIITYTPFMNCLIRLGQNGDALCMFRNMI-LEGIVPDA 780
D E AF VL M Y C PN++TY+ + L R G+ +A +F MI + IVPD
Sbjct: 203 DSETAFRVLDEMREYTCGDVRPNLVTYSTLIGGLCRAGKMKEAFELFEEMIEKDHIVPDQ 262
Query: 779 FCYGILINMYLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGL 600
Y ++IN + + KA + MRK++C PN ++ +N +++ + VF
Sbjct: 263 LTYNVIINGFCRLGQVDKARTIFGFMRKNECEPNAFNYATLMNGHSRKGELENLRMVFEE 322
Query: 599 MMKTGFTPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDR 420
M G PDA +YT +I LC+ G+VD+ +D+V +M+ +GC DVV YNL+I GLCK R
Sbjct: 323 MKSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVREMREKGCKADVVTYNLLIEGLCKDKR 382
Query: 419 FEEVDGILDRILKNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTL-- 246
E +L + G + +Y I+++ L + GD +A V L + LG L
Sbjct: 383 MVEAMDLLRSLPLEGVQLNVASYRIVMNSLCSCGDMEKA------VGLLGLMLGRGFLPH 436
Query: 245 ----NPLVSGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVL 81
N L+ GL VG++ + + L GF P + W +V AVC +++L ++ ++L
Sbjct: 437 YAASNDLLIGLCGVGRVADATVALYGLASVGFKPDTSCWGKLVEAVCRDRKLRRSVELL 495
Score = 69.3 bits (168), Expect = 2e-09
Identities = 36/182 (19%), Positives = 87/182 (47%), Gaps = 4/182 (2%)
Frame = -3
Query: 581 TPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCP---PDVVPYNLIIAGLCKMDRFEE 411
TP+ Y +I H K G + A ++++M+ C P++V Y+ +I GLC+ + +E
Sbjct: 185 TPNTCVYNILIKHYVKNGDSETAFRVLDEMREYTCGDVRPNLVTYSTLIGGLCRAGKMKE 244
Query: 410 VDGILDRIL-KNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLV 234
+ + ++ K+ PD++TY ++I+ +G +A F ++ + L+
Sbjct: 245 AFELFEEMIEKDHIVPDQLTYNVIINGFCRLGQVDKARTIFGFMRKNECEPNAFNYATLM 304
Query: 233 SGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVLMKVWKSSSK 54
+G + G+++ L V + + G P ++ ++ +C + + ++ ++ + K
Sbjct: 305 NGHSRKGELENLRMVFEEMKSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVREMREKGCK 364
Query: 53 EE 48
+
Sbjct: 365 AD 366
Score = 60.8 bits (146), Expect = 1e-06
Identities = 42/191 (21%), Positives = 78/191 (40%)
Frame = -3
Query: 947 DMERAFGVLHRMGGYMCAPNIITYTPFMNCLIRLGQNGDALCMFRNMILEGIVPDAFCYG 768
++E V M P+ ++YT + CL R G + + + R M +G D Y
Sbjct: 312 ELENLRMVFEEMKSAGVEPDAVSYTALIGCLCRHGSVDEGIDLVREMREKGCKADVVTYN 371
Query: 767 ILINMYLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMMKT 588
+LI + + + +AM +L + N +N+ + A+ + GLM+
Sbjct: 372 LLIEGLCKDKRMVEAMDLLRSLPLEGVQLNVASYRIVMNSLCSCGDMEKAVGLLGLMLGR 431
Query: 587 GFTPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDRFEEV 408
GF P A ++ LC G V A + + G PD + ++ +C+ +
Sbjct: 432 GFLPHYAASNDLLIGLCGVGRVADATVALYGLASVGFKPDTSCWGKLVEAVCRDRKLRRS 491
Query: 407 DGILDRILKNG 375
+LD ++ G
Sbjct: 492 VELLDVLITEG 502
>XP_002283907.4 PREDICTED: pentatricopeptide repeat-containing protein At5g18475
[Vitis vinifera]
Length = 513
Score = 165 bits (417), Expect = 2e-43
Identities = 92/291 (31%), Positives = 157/291 (53%), Gaps = 2/291 (0%)
Frame = -3
Query: 947 DMERAFGVLHRMG-GYMCAPNIITYTPFMNCLIRLGQNGDALCMFRNMILEG-IVPDAFC 774
D++ AF V+ M ++ PN+ITY+ +N L G+ +A+ +F M+ + I+PDA
Sbjct: 215 DIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALT 274
Query: 773 YGILINMYLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMM 594
Y LIN + GE + +A+ ++E M+K+ C PN S+ +N + K + A VF M
Sbjct: 275 YNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMK 334
Query: 593 KTGFTPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDRFE 414
G PD YT +I+ C+ G VD+A+++++ M+ C D V +N+I+ GLC+ RFE
Sbjct: 335 SLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFE 394
Query: 413 EVDGILDRILKNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLV 234
E G+L+R+ G +K +Y I+++ L G+ +A + + + T N L+
Sbjct: 395 EARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELL 454
Query: 233 SGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVL 81
L GK+ + + LL GF P +W +V +C E++L A ++L
Sbjct: 455 VHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELL 505
Score = 68.6 bits (166), Expect = 3e-09
Identities = 39/168 (23%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Frame = -3
Query: 578 PDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCP-PDVVPYNLIIAGLCKMDRFEEVDG 402
P+ + ++ H CK G +D A ++VE+MK P+++ Y+ +I GLC R +E
Sbjct: 198 PNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIE 257
Query: 401 ILDRIL-KNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLVSGL 225
+ + ++ K+ PD +TY LI+ + +A+ E++ + L++G
Sbjct: 258 LFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGF 317
Query: 224 ANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVL 81
G+++E V D + G P + +++ C + +A ++L
Sbjct: 318 CKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELL 365
>KCW88327.1 hypothetical protein EUGRSUZ_A00716 [Eucalyptus grandis]
Length = 458
Score = 163 bits (413), Expect = 3e-43
Identities = 95/300 (31%), Positives = 155/300 (51%), Gaps = 2/300 (0%)
Frame = -3
Query: 947 DMERAFGVLHRMGGYMCA-PNIITYTPFMNCLIRLGQNGDALCMFRNMILEG-IVPDAFC 774
D+E AF V+ M C+ PN+ITY+ M+CL + G+ DAL +F MI + IVPDA
Sbjct: 149 DIESAFEVVREMKMSKCSYPNLITYSTLMDCLCKSGRVKDALQLFEEMIAKDQIVPDALT 208
Query: 773 YGILINMYLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMM 594
Y +LIN + + + A +++ MR + C PN S+ +N K + A V M
Sbjct: 209 YNVLINGFCKSGKVDGARKIMDFMRNNGCNPNVYNFSTLMNGMCKEGRLQEAKGVIAEMK 268
Query: 593 KTGFTPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDRFE 414
G DA YT +I+ C+ G D+AL+++++MK GC D+V +N+++ GLC+ RF
Sbjct: 269 DLGMKLDAVGYTTLINSFCRSGRTDEALELIKEMKNIGCKADIVTFNVLLGGLCREGRFP 328
Query: 413 EVDGILDRILKNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLV 234
E +L+R+ G +K +Y I+++ L + +A + ++ T N L+
Sbjct: 329 EALQMLERLPFEGVHLNKGSYRIVLNSLCQKDEIEKATELLLLMFVRGFLPHYETSNELL 388
Query: 233 SGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVLMKVWKSSSK 54
S L G + R + L+ GFTP W +V +C E++L ++L K+ K
Sbjct: 389 SSLCKKGMTFDAVRALFGLVEMGFTPKPDLWSLLVEVICRERKLLVTFELLDKLTGQKGK 448
>XP_010942656.2 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g18475 [Elaeis guineensis]
Length = 508
Score = 163 bits (413), Expect = 7e-43
Identities = 99/300 (33%), Positives = 157/300 (52%), Gaps = 8/300 (2%)
Frame = -3
Query: 947 DMERAFGVLHRMGGYMCA-PNIITYTPFMNCLIRLGQNGDALCMFRNMI-LEGIVPDAFC 774
D++ AF VL M A PN+ITY+ M L + G+ DA +F MI + IVPD
Sbjct: 209 DLDSAFRVLEVMRTSNSARPNLITYSTLMGGLCKEGKLKDAFQLFEEMIEKDRIVPDPLT 268
Query: 773 YGILINMYLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMM 594
Y +LI+ + + KA ++ MR + C PN S+ +N + K + A VF M
Sbjct: 269 YNVLIDGFCREGQVEKARAIMAFMRNNGCEPNMFNYSTLMNGFCKEGKVEEAKEVFEQMK 328
Query: 593 KTGFTPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDRFE 414
K G DA +YT +I LC++G VD+ +++V++M+ GC DVV YN++I GLCK RF
Sbjct: 329 KAGLEADAVSYTTLIGCLCREGRVDEGIELVKEMRESGCKADVVAYNVVIEGLCKDGRFA 388
Query: 413 EVDGILDRILKNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGN------R 252
E +L+ + G + +Y I+++ L N G A V L + LG
Sbjct: 389 EAMDLLESLPYEGVRLNVASYRIVLNCLCNRGKMEMA------VGLLGLMLGRGFVPHVA 442
Query: 251 TLNPLVSGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVLMKV 72
T N L+ GL + ++ + + L+ GF P + TW +V +VC E++L K +++ ++
Sbjct: 443 TSNKLLVGLCEIERMGDATIALYALVEMGFRPEIETWIHLVESVCRERKLKKVFELIDEI 502
Score = 66.6 bits (161), Expect = 1e-08
Identities = 35/179 (19%), Positives = 82/179 (45%), Gaps = 2/179 (1%)
Frame = -3
Query: 578 PDATAYTPIISHLCKQGAVDQALDIVEKMK-GEGCPPDVVPYNLIIAGLCKMDRFEEVDG 402
P+ Y ++ CK G +D A ++E M+ P+++ Y+ ++ GLCK + ++
Sbjct: 192 PNTCVYNILVKRHCKAGDLDSAFRVLEVMRTSNSARPNLITYSTLMGGLCKEGKLKDAFQ 251
Query: 401 ILDRIL-KNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLVSGL 225
+ + ++ K+ PD +TY +LI G +A ++ + L++G
Sbjct: 252 LFEEMIEKDRIVPDPLTYNVLIDGFCREGQVEKARAIMAFMRNNGCEPNMFNYSTLMNGF 311
Query: 224 ANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVLMKVWKSSSKEE 48
GK++E V + + G ++ ++ +C E + + +++ ++ +S K +
Sbjct: 312 CKEGKVEEAKEVFEQMKKAGLEADAVSYTTLIGCLCREGRVDEGIELVKEMRESGCKAD 370
>XP_010043082.1 PREDICTED: pentatricopeptide repeat-containing protein At5g18475
[Eucalyptus grandis] XP_010043085.1 PREDICTED:
pentatricopeptide repeat-containing protein At5g18475
[Eucalyptus grandis] XP_018727146.1 PREDICTED:
pentatricopeptide repeat-containing protein At5g18475
[Eucalyptus grandis]
Length = 541
Score = 163 bits (413), Expect = 1e-42
Identities = 95/300 (31%), Positives = 155/300 (51%), Gaps = 2/300 (0%)
Frame = -3
Query: 947 DMERAFGVLHRMGGYMCA-PNIITYTPFMNCLIRLGQNGDALCMFRNMILEG-IVPDAFC 774
D+E AF V+ M C+ PN+ITY+ M+CL + G+ DAL +F MI + IVPDA
Sbjct: 232 DIESAFEVVREMKMSKCSYPNLITYSTLMDCLCKSGRVKDALQLFEEMIAKDQIVPDALT 291
Query: 773 YGILINMYLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMM 594
Y +LIN + + + A +++ MR + C PN S+ +N K + A V M
Sbjct: 292 YNVLINGFCKSGKVDGARKIMDFMRNNGCNPNVYNFSTLMNGMCKEGRLQEAKGVIAEMK 351
Query: 593 KTGFTPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDRFE 414
G DA YT +I+ C+ G D+AL+++++MK GC D+V +N+++ GLC+ RF
Sbjct: 352 DLGMKLDAVGYTTLINSFCRSGRTDEALELIKEMKNIGCKADIVTFNVLLGGLCREGRFP 411
Query: 413 EVDGILDRILKNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLV 234
E +L+R+ G +K +Y I+++ L + +A + ++ T N L+
Sbjct: 412 EALQMLERLPFEGVHLNKGSYRIVLNSLCQKDEIEKATELLLLMFVRGFLPHYETSNELL 471
Query: 233 SGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVLMKVWKSSSK 54
S L G + R + L+ GFTP W +V +C E++L ++L K+ K
Sbjct: 472 SSLCKKGMTFDAVRALFGLVEMGFTPKPDLWSLLVEVICRERKLLVTFELLDKLTGQKGK 531
>XP_016569086.1 PREDICTED: pentatricopeptide repeat-containing protein At5g18475
[Capsicum annuum] XP_016569087.1 PREDICTED:
pentatricopeptide repeat-containing protein At5g18475
[Capsicum annuum] XP_016569089.1 PREDICTED:
pentatricopeptide repeat-containing protein At5g18475
[Capsicum annuum]
Length = 512
Score = 162 bits (411), Expect = 2e-42
Identities = 91/291 (31%), Positives = 152/291 (52%), Gaps = 2/291 (0%)
Frame = -3
Query: 947 DMERAFGVLHRMG-GYMCAPNIITYTPFMNCLIRLGQNGDALCMFRNMILEG-IVPDAFC 774
D+E AF V+ M + PN+ITY+ M+ L R G+ +A+ +F M+ E I PDA
Sbjct: 216 DVEAAFEVVEEMRKSRVSHPNLITYSTLMDGLCRCGRLLEAIDLFEKMLAEDQIPPDALT 275
Query: 773 YGILINMYLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMM 594
Y ILIN + + +A ++E MRK+ C PN V ++ +N + + + A +F M
Sbjct: 276 YNILINAFCRAGKVDRARKIIEFMRKNGCQPNIVNYTALMNGFCREGRVGNAKEIFHEMK 335
Query: 593 KTGFTPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDRFE 414
G TPD YT +I+ C+ G VD+ ++++E+MK +GC D V +I+ GLC+ R
Sbjct: 336 GVGLTPDVVGYTTLINSFCRAGKVDEGIELLEEMKDQGCKADDVTVKIILGGLCRASRSS 395
Query: 413 EVDGILDRILKNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLV 234
E +L+R+ +G K +Y I+++ L G+ +A+ + ++ N L+
Sbjct: 396 EAFDMLERLPYDGVRLSKESYRIVLNFLCKEGELEKAMELLGLMLARRFVPHFAMSNELL 455
Query: 233 SGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVL 81
L GK + + LL GF P TW ++ +C E++L A ++L
Sbjct: 456 VQLCEAGKAADAALALFGLLEMGFKPEPKTWSMLIDVICRERKLLPAFQLL 506
Score = 68.9 bits (167), Expect = 2e-09
Identities = 50/281 (17%), Positives = 114/281 (40%), Gaps = 39/281 (13%)
Frame = -3
Query: 773 YGILINMYLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMM 594
Y +L++ + K V+ M+ C N V ++ + Y+K SF + +F ++
Sbjct: 97 YAVLLHRLAVCKKFEKVDAVIHQMKYETCKFNEGVFTNLMKHYSKSSFHEKVVEMFDAIL 156
Query: 593 -------------------------------------KTGFTPDATAYTPIISHLCKQGA 525
+ P+ + ++ + C+ G
Sbjct: 157 PIVRDKPSLNAISTCLNLLIEAKQIELAKEFLLNVQKRLDLKPNTCIFNIMVKYHCRTGD 216
Query: 524 VDQALDIVEKM-KGEGCPPDVVPYNLIIAGLCKMDRFEEVDGILDRIL-KNGCTPDKITY 351
V+ A ++VE+M K P+++ Y+ ++ GLC+ R E + +++L ++ PD +TY
Sbjct: 217 VEAAFEVVEEMRKSRVSHPNLITYSTLMDGLCRCGRLLEAIDLFEKMLAEDQIPPDALTY 276
Query: 350 EILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLVSGLANVGKIKELGRVVDTLLG 171
ILI+ G +A E++ + L++G G++ + + G
Sbjct: 277 NILINAFCRAGKVDRARKIIEFMRKNGCQPNIVNYTALMNGFCREGRVGNAKEIFHEMKG 336
Query: 170 EGFTPYLTTWECMVSAVCSEKELGKAAKVLMKVWKSSSKEE 48
G TP + + ++++ C ++ + ++L ++ K +
Sbjct: 337 VGLTPDVVGYTTLINSFCRAGKVDEGIELLEEMKDQGCKAD 377
>XP_009629855.1 PREDICTED: pentatricopeptide repeat-containing protein At5g18475
[Nicotiana tomentosiformis] XP_018634468.1 PREDICTED:
pentatricopeptide repeat-containing protein At5g18475
[Nicotiana tomentosiformis]
Length = 512
Score = 161 bits (408), Expect = 4e-42
Identities = 92/291 (31%), Positives = 152/291 (52%), Gaps = 2/291 (0%)
Frame = -3
Query: 947 DMERAFGVLHRMG-GYMCAPNIITYTPFMNCLIRLGQNGDALCMFRNMILEG-IVPDAFC 774
D+E AF V+ M + PN+ITY+ M+ L R G+ +A+ +F M+ E I PDA
Sbjct: 216 DVEAAFVVVEEMRKSRVSYPNLITYSTLMDGLCRCGRLQEAIDLFEKMLAEDQIPPDALT 275
Query: 773 YGILINMYLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMM 594
Y ILIN + + +A +++ M+K+ C PN V ++ +N + K A VF M
Sbjct: 276 YNILINAFSRAGKVDRATKIIDFMKKNGCQPNIVNYTALMNGFCKEGKEEDAKEVFHKMK 335
Query: 593 KTGFTPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDRFE 414
+ G TPD YT +I+ C+ G VD+ ++++E+MK +GC D V +I+ GLC+ R
Sbjct: 336 RVGLTPDIVGYTTLINSFCRAGKVDEGIELLEEMKDKGCKADDVTIKVILGGLCRASRSS 395
Query: 413 EVDGILDRILKNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLV 234
E +L+R+ +G K +Y I+++ L G+ +A+ + + T N L+
Sbjct: 396 EAFDMLERLPYDGIRLSKESYRIVLNFLCKEGELEKAMELLGLMLARGFVPHFATSNELI 455
Query: 233 SGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVL 81
VGK + + LL GF P TW ++ +C E++L A ++L
Sbjct: 456 VQQCEVGKAADAAMALFGLLEMGFKPEPQTWSLLIDVICRERKLLPAFQLL 506
Score = 67.4 bits (163), Expect = 7e-09
Identities = 53/254 (20%), Positives = 116/254 (45%), Gaps = 10/254 (3%)
Frame = -3
Query: 779 FCYGILINM---YLEGELIHKAM----GVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPG 621
F GI IN+ Y + L K + +L ++R+ P+ +S+ LN + I
Sbjct: 127 FHEGIFINLMKHYSKSSLHEKVLEMFNAILPIVREK---PSLNAISTCLNLLIEAKQIDL 183
Query: 620 ALS-VFGLMMKTGFTPDATAYTPIISHLCKQGAVDQALDIVEKM-KGEGCPPDVVPYNLI 447
A + + P+ + ++ + C++G V+ A +VE+M K P+++ Y+ +
Sbjct: 184 AREFLLNVQKHLDLKPNTCIFNILVKYHCRKGDVEAAFVVVEEMRKSRVSYPNLITYSTL 243
Query: 446 IAGLCKMDRFEEVDGILDRIL-KNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKK 270
+ GLC+ R +E + +++L ++ PD +TY ILI+ G +A +++
Sbjct: 244 MDGLCRCGRLQEAIDLFEKMLAEDQIPPDALTYNILINAFSRAGKVDRATKIIDFMKKNG 303
Query: 269 IRLGNRTLNPLVSGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAA 90
+ L++G GK ++ V + G TP + + ++++ C ++ +
Sbjct: 304 CQPNIVNYTALMNGFCKEGKEEDAKEVFHKMKRVGLTPDIVGYTTLINSFCRAGKVDEGI 363
Query: 89 KVLMKVWKSSSKEE 48
++L ++ K +
Sbjct: 364 ELLEEMKDKGCKAD 377
>5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U8g2 In Complex With Its Target Rna U8g2
Length = 460
Score = 159 bits (403), Expect = 9e-42
Identities = 84/286 (29%), Positives = 152/286 (53%)
Frame = -3
Query: 893 PNIITYTPFMNCLIRLGQNGDALCMFRNMILEGIVPDAFCYGILINMYLEGELIHKAMGV 714
P+++TY ++ L + G+ +AL +F M+ +GI PD Y LI+ + + +A+ +
Sbjct: 119 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 178
Query: 713 LELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMMKTGFTPDATAYTPIISHLCK 534
E M + P+ V ++ ++ K + AL +F M++ G PD YT +I LCK
Sbjct: 179 FEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCK 238
Query: 533 QGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDRFEEVDGILDRILKNGCTPDKIT 354
G +D+AL + E+M +G PDVV YN +I GLCK + +E + + +++ G PD +T
Sbjct: 239 AGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVT 298
Query: 353 YEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLVSGLANVGKIKELGRVVDTLL 174
Y LI L G +A+ FE + K I+ T N L+ GL GK+ E ++ + ++
Sbjct: 299 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 358
Query: 173 GEGFTPYLTTWECMVSAVCSEKELGKAAKVLMKVWKSSSKEERTSH 36
+G P + T+ ++ +C +L +A K+ ++ + K + ++
Sbjct: 359 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTY 404
Score = 157 bits (396), Expect = 9e-41
Identities = 87/295 (29%), Positives = 152/295 (51%)
Frame = -3
Query: 932 FGVLHRMGGYMCAPNIITYTPFMNCLIRLGQNGDALCMFRNMILEGIVPDAFCYGILINM 753
F L R G AP ++TY ++ L + G+ +AL +F M+ +GI PD Y LI+
Sbjct: 39 FAELRRQG---VAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 95
Query: 752 YLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMMKTGFTPD 573
+ + +A+ + E M + P+ V ++ ++ K + AL +F M++ G PD
Sbjct: 96 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 155
Query: 572 ATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDRFEEVDGILD 393
Y +I LCK G +D+AL + E+M +G PDVV Y +I GLCK + +E + +
Sbjct: 156 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFE 215
Query: 392 RILKNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLVSGLANVG 213
+++ G PD +TY LI L G +A+ FE + K I+ T N L+ GL G
Sbjct: 216 EMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 275
Query: 212 KIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVLMKVWKSSSKEE 48
K+ E ++ + ++ +G P + T+ ++ +C +L +A K+ ++ + K +
Sbjct: 276 KLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 330
Score = 156 bits (395), Expect = 1e-40
Identities = 83/282 (29%), Positives = 149/282 (52%)
Frame = -3
Query: 893 PNIITYTPFMNCLIRLGQNGDALCMFRNMILEGIVPDAFCYGILINMYLEGELIHKAMGV 714
P+++TY ++ L + G+ +AL +F M+ +GI PD Y LI+ + + +A+ +
Sbjct: 84 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 143
Query: 713 LELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMMKTGFTPDATAYTPIISHLCK 534
E M + P+ V ++ ++ K + AL +F M++ G PD YT +I LCK
Sbjct: 144 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCK 203
Query: 533 QGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDRFEEVDGILDRILKNGCTPDKIT 354
G +D+AL + E+M +G PDVV Y +I GLCK + +E + + +++ G PD +T
Sbjct: 204 AGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVT 263
Query: 353 YEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLVSGLANVGKIKELGRVVDTLL 174
Y LI L G +A+ FE + K I+ T N L+ GL GK+ E ++ + ++
Sbjct: 264 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 323
Query: 173 GEGFTPYLTTWECMVSAVCSEKELGKAAKVLMKVWKSSSKEE 48
+G P + T+ ++ +C +L +A K+ ++ + K +
Sbjct: 324 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 365
Score = 152 bits (383), Expect = 7e-39
Identities = 84/274 (30%), Positives = 143/274 (52%)
Frame = -3
Query: 893 PNIITYTPFMNCLIRLGQNGDALCMFRNMILEGIVPDAFCYGILINMYLEGELIHKAMGV 714
P+++TY ++ L + G+ +AL +F M+ +GI PD Y LI+ + + +A+ +
Sbjct: 154 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKL 213
Query: 713 LELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMMKTGFTPDATAYTPIISHLCK 534
E M + P+ V ++ ++ K + AL +F M++ G PD Y +I LCK
Sbjct: 214 FEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 273
Query: 533 QGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDRFEEVDGILDRILKNGCTPDKIT 354
G +D+AL + E+M +G PDVV YN +I GLCK + +E + + +++ G PD +T
Sbjct: 274 AGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVT 333
Query: 353 YEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLVSGLANVGKIKELGRVVDTLL 174
Y LI L G +A+ FE + K I+ T N L+ GL GK+ E ++ + ++
Sbjct: 334 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 393
Query: 173 GEGFTPYLTTWECMVSAVCSEKELGKAAKVLMKV 72
+G P T+ +V + C K +A L +V
Sbjct: 394 EKGIKPDELTYRRVVESYCRAKRFEEARGFLSEV 427
Score = 144 bits (362), Expect = 7e-36
Identities = 79/281 (28%), Positives = 143/281 (50%)
Frame = -3
Query: 890 NIITYTPFMNCLIRLGQNGDALCMFRNMILEGIVPDAFCYGILINMYLEGELIHKAMGVL 711
++ YT ++ L R G+ AL +F + +G+ P Y LI+ + + +A+ +
Sbjct: 15 DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLF 74
Query: 710 ELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMMKTGFTPDATAYTPIISHLCKQ 531
E M + P+ V ++ ++ K + AL +F M++ G PD Y +I LCK
Sbjct: 75 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 134
Query: 530 GAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDRFEEVDGILDRILKNGCTPDKITY 351
G +D+AL + E+M +G PDVV YN +I GLCK + +E + + +++ G PD +TY
Sbjct: 135 GKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 194
Query: 350 EILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLVSGLANVGKIKELGRVVDTLLG 171
LI L G +A+ FE + K I+ T L+ GL GK+ E ++ + ++
Sbjct: 195 TTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVE 254
Query: 170 EGFTPYLTTWECMVSAVCSEKELGKAAKVLMKVWKSSSKEE 48
+G P + T+ ++ +C +L +A K+ ++ + K +
Sbjct: 255 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 295
Score = 122 bits (306), Expect = 6e-28
Identities = 66/230 (28%), Positives = 119/230 (51%)
Frame = -3
Query: 893 PNIITYTPFMNCLIRLGQNGDALCMFRNMILEGIVPDAFCYGILINMYLEGELIHKAMGV 714
P+++TYT ++ L + G+ +AL +F M+ +GI PD Y LI+ + + +A+ +
Sbjct: 224 PDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 283
Query: 713 LELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMMKTGFTPDATAYTPIISHLCK 534
E M + P+ V ++ ++ K + AL +F M++ G PD Y +I LCK
Sbjct: 284 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 343
Query: 533 QGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDRFEEVDGILDRILKNGCTPDKIT 354
G +D+AL + E+M +G PDVV YN +I GLCK + +E + + +++ G PD++T
Sbjct: 344 AGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELT 403
Query: 353 YEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLVSGLANVGKIK 204
Y ++ F +A F V+ + + L + A G+++
Sbjct: 404 YRRVVESYCRAKRFEEARGFLSEVSETDLDFDKKALEAYIED-AQFGRLE 452
>5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
Protein Dppr- U10 In Complex With Its Target Rna U10
Length = 460
Score = 159 bits (403), Expect = 9e-42
Identities = 88/295 (29%), Positives = 153/295 (51%)
Frame = -3
Query: 932 FGVLHRMGGYMCAPNIITYTPFMNCLIRLGQNGDALCMFRNMILEGIVPDAFCYGILINM 753
F L R G AP ++TY ++ L + G+ +AL +F M+ +GI PD Y LI+
Sbjct: 39 FAELRRQG---VAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDG 95
Query: 752 YLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMMKTGFTPD 573
+ + +A+ + E M + P+ V ++ ++ K + AL +F M++ G PD
Sbjct: 96 LCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 155
Query: 572 ATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDRFEEVDGILD 393
Y +I LCK G +D+AL + E+M +G PDVV YN +I GLCK + +E + +
Sbjct: 156 VVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFE 215
Query: 392 RILKNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLVSGLANVG 213
+++ G PD +TY LI L G +A+ FE + K I+ T N L+ GL G
Sbjct: 216 EMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAG 275
Query: 212 KIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVLMKVWKSSSKEE 48
K+ E ++ + ++ +G P + T+ ++ +C +L +A K+ ++ + K +
Sbjct: 276 KLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 330
Score = 157 bits (398), Expect = 5e-41
Identities = 83/286 (29%), Positives = 151/286 (52%)
Frame = -3
Query: 893 PNIITYTPFMNCLIRLGQNGDALCMFRNMILEGIVPDAFCYGILINMYLEGELIHKAMGV 714
P+++TY ++ L + G+ +AL +F M+ +GI PD Y LI+ + + +A+ +
Sbjct: 119 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 178
Query: 713 LELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMMKTGFTPDATAYTPIISHLCK 534
E M + P+ V ++ ++ K + AL +F M++ G PD Y +I LCK
Sbjct: 179 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 238
Query: 533 QGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDRFEEVDGILDRILKNGCTPDKIT 354
G +D+AL + E+M +G PDVV YN +I GLCK + +E + + +++ G PD +T
Sbjct: 239 AGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVT 298
Query: 353 YEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLVSGLANVGKIKELGRVVDTLL 174
Y LI L G +A+ FE + K I+ T N L+ GL GK+ E ++ + ++
Sbjct: 299 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 358
Query: 173 GEGFTPYLTTWECMVSAVCSEKELGKAAKVLMKVWKSSSKEERTSH 36
+G P + T+ ++ +C +L +A K+ ++ + K + ++
Sbjct: 359 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTY 404
Score = 157 bits (396), Expect = 9e-41
Identities = 83/282 (29%), Positives = 149/282 (52%)
Frame = -3
Query: 893 PNIITYTPFMNCLIRLGQNGDALCMFRNMILEGIVPDAFCYGILINMYLEGELIHKAMGV 714
P+++TY ++ L + G+ +AL +F M+ +GI PD Y LI+ + + +A+ +
Sbjct: 84 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 143
Query: 713 LELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMMKTGFTPDATAYTPIISHLCK 534
E M + P+ V ++ ++ K + AL +F M++ G PD Y +I LCK
Sbjct: 144 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 203
Query: 533 QGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDRFEEVDGILDRILKNGCTPDKIT 354
G +D+AL + E+M +G PDVV YN +I GLCK + +E + + +++ G PD +T
Sbjct: 204 AGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVT 263
Query: 353 YEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLVSGLANVGKIKELGRVVDTLL 174
Y LI L G +A+ FE + K I+ T N L+ GL GK+ E ++ + ++
Sbjct: 264 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 323
Query: 173 GEGFTPYLTTWECMVSAVCSEKELGKAAKVLMKVWKSSSKEE 48
+G P + T+ ++ +C +L +A K+ ++ + K +
Sbjct: 324 EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 365
Score = 152 bits (385), Expect = 4e-39
Identities = 84/274 (30%), Positives = 143/274 (52%)
Frame = -3
Query: 893 PNIITYTPFMNCLIRLGQNGDALCMFRNMILEGIVPDAFCYGILINMYLEGELIHKAMGV 714
P+++TY ++ L + G+ +AL +F M+ +GI PD Y LI+ + + +A+ +
Sbjct: 154 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 213
Query: 713 LELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMMKTGFTPDATAYTPIISHLCK 534
E M + P+ V ++ ++ K + AL +F M++ G PD Y +I LCK
Sbjct: 214 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 273
Query: 533 QGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDRFEEVDGILDRILKNGCTPDKIT 354
G +D+AL + E+M +G PDVV YN +I GLCK + +E + + +++ G PD +T
Sbjct: 274 AGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVT 333
Query: 353 YEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLVSGLANVGKIKELGRVVDTLL 174
Y LI L G +A+ FE + K I+ T N L+ GL GK+ E ++ + ++
Sbjct: 334 YNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMV 393
Query: 173 GEGFTPYLTTWECMVSAVCSEKELGKAAKVLMKV 72
+G P T+ +V + C K +A L +V
Sbjct: 394 EKGIKPDELTYRRVVESYCRAKRFEEARGFLSEV 427
Score = 146 bits (369), Expect = 7e-37
Identities = 80/281 (28%), Positives = 144/281 (51%)
Frame = -3
Query: 890 NIITYTPFMNCLIRLGQNGDALCMFRNMILEGIVPDAFCYGILINMYLEGELIHKAMGVL 711
++ YT ++ L R G+ AL +F + +G+ P Y LI+ + + +A+ +
Sbjct: 15 DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLF 74
Query: 710 ELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMMKTGFTPDATAYTPIISHLCKQ 531
E M + P+ V ++ ++ K + AL +F M++ G PD Y +I LCK
Sbjct: 75 EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKA 134
Query: 530 GAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDRFEEVDGILDRILKNGCTPDKITY 351
G +D+AL + E+M +G PDVV YN +I GLCK + +E + + +++ G PD +TY
Sbjct: 135 GKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTY 194
Query: 350 EILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLVSGLANVGKIKELGRVVDTLLG 171
LI L G +A+ FE + K I+ T N L+ GL GK+ E ++ + ++
Sbjct: 195 NTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE 254
Query: 170 EGFTPYLTTWECMVSAVCSEKELGKAAKVLMKVWKSSSKEE 48
+G P + T+ ++ +C +L +A K+ ++ + K +
Sbjct: 255 KGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPD 295
Score = 120 bits (301), Expect = 3e-27
Identities = 65/230 (28%), Positives = 118/230 (51%)
Frame = -3
Query: 893 PNIITYTPFMNCLIRLGQNGDALCMFRNMILEGIVPDAFCYGILINMYLEGELIHKAMGV 714
P+++TY ++ L + G+ +AL +F M+ +GI PD Y LI+ + + +A+ +
Sbjct: 224 PDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKL 283
Query: 713 LELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMMKTGFTPDATAYTPIISHLCK 534
E M + P+ V ++ ++ K + AL +F M++ G PD Y +I LCK
Sbjct: 284 FEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCK 343
Query: 533 QGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDRFEEVDGILDRILKNGCTPDKIT 354
G +D+AL + E+M +G PDVV YN +I GLCK + +E + + +++ G PD++T
Sbjct: 344 AGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELT 403
Query: 353 YEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLVSGLANVGKIK 204
Y ++ F +A F V+ + + L + A G+++
Sbjct: 404 YRRVVESYCRAKRFEEARGFLSEVSETDLDFDKKALEAYIED-AQFGRLE 452
>XP_004237977.1 PREDICTED: pentatricopeptide repeat-containing protein At5g18475
[Solanum lycopersicum]
Length = 511
Score = 160 bits (405), Expect = 1e-41
Identities = 91/291 (31%), Positives = 151/291 (51%), Gaps = 2/291 (0%)
Frame = -3
Query: 947 DMERAFGVLHRMG-GYMCAPNIITYTPFMNCLIRLGQNGDALCMFRNMILEG-IVPDAFC 774
D++ AF V+ M + PN+ITY+ M+ L R G+ DAL +F M+ + I PDA
Sbjct: 215 DVDAAFVVVEEMRKSRVSHPNLITYSTLMDGLCRCGRLQDALDLFEKMLAKDQIPPDALT 274
Query: 773 YGILINMYLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMM 594
Y ILIN + + +A ++ MRK+ C PN V ++ +N + K + A VF M
Sbjct: 275 YNILINAFCRAGKVDRARNIIGFMRKNGCQPNIVNYTALMNGFCKEGRVEDAKEVFHEMK 334
Query: 593 KTGFTPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDRFE 414
G PD YT +I+ C+ G VD+ ++++++MK +GC D V +I+ GLC+ R
Sbjct: 335 GVGLKPDVVGYTTLINSFCRAGKVDEGIELLDEMKDKGCKADDVTIKIILGGLCRASRSS 394
Query: 413 EVDGILDRILKNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLV 234
E +L+R+ +G K +Y I+++ L G+ +A+ + ++ T N L+
Sbjct: 395 EAFNMLERLPYDGVHLSKESYRIVLNFLCKEGELVKAMDLLGLMLARRFVPHFATSNELI 454
Query: 233 SGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVL 81
L GK + + LL GF P TW ++ +C E++L A ++L
Sbjct: 455 VQLCEAGKAADAALALFGLLEMGFKPEPQTWSMLIDVICRERKLLPAFQLL 505
Score = 67.4 bits (163), Expect = 7e-09
Identities = 41/170 (24%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Frame = -3
Query: 578 PDATAYTPIISHLCKQGAVDQALDIVEKM-KGEGCPPDVVPYNLIIAGLCKMDRFEEVDG 402
P+ + ++ + CK+G VD A +VE+M K P+++ Y+ ++ GLC+ R ++
Sbjct: 198 PNTCIFNILVKYHCKKGDVDAAFVVVEEMRKSRVSHPNLITYSTLMDGLCRCGRLQDALD 257
Query: 401 ILDRIL-KNGCTPDKITYEILISHLVNMG--DFSQAVVFFEWVNLKKIRLGNRTLNPLVS 231
+ +++L K+ PD +TY ILI+ G D ++ ++ F N + + N T L++
Sbjct: 258 LFEKMLAKDQIPPDALTYNILINAFCRAGKVDRARNIIGFMRKNGCQPNIVNYT--ALMN 315
Query: 230 GLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVL 81
G G++++ V + G G P + + ++++ C ++ + ++L
Sbjct: 316 GFCKEGRVEDAKEVFHEMKGVGLKPDVVGYTTLINSFCRAGKVDEGIELL 365
>XP_009795490.1 PREDICTED: pentatricopeptide repeat-containing protein At5g18475
[Nicotiana sylvestris] XP_009795491.1 PREDICTED:
pentatricopeptide repeat-containing protein At5g18475
[Nicotiana sylvestris] XP_016499828.1 PREDICTED:
pentatricopeptide repeat-containing protein
At5g18475-like [Nicotiana tabacum] XP_016499829.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Nicotiana tabacum]
Length = 512
Score = 160 bits (405), Expect = 1e-41
Identities = 91/291 (31%), Positives = 152/291 (52%), Gaps = 2/291 (0%)
Frame = -3
Query: 947 DMERAFGVLHRMGGYMCA-PNIITYTPFMNCLIRLGQNGDALCMFRNMILEG-IVPDAFC 774
D+E AF V+ M + + PN+ITY+ M+ L R G+ +A+ +F M+ E I PDA
Sbjct: 216 DVEAAFVVVEEMRKSIVSYPNLITYSTLMDGLCRCGRLQEAIDLFEKMLAEDQIPPDALT 275
Query: 773 YGILINMYLEGELIHKAMGVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPGALSVFGLMM 594
Y ILIN + + +A +++ M+K+ C PN V ++ +N + K A VF M
Sbjct: 276 YNILINAFSRAGKVDRATNIIDFMKKNGCQPNIVNYTALMNGFCKEGRGEDAKEVFHEMK 335
Query: 593 KTGFTPDATAYTPIISHLCKQGAVDQALDIVEKMKGEGCPPDVVPYNLIIAGLCKMDRFE 414
+ G TPD YT +I+ C+ G VD+ ++++E+MK +GC D V +I+ GLC+ R
Sbjct: 336 RVGLTPDIVGYTTLINSFCRAGKVDEGIELLEEMKDKGCKADDVTIKVILGGLCRASRSS 395
Query: 413 EVDGILDRILKNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKKIRLGNRTLNPLV 234
E +L+R+ +G K +Y I+++ L G+ +A+ + + T N L+
Sbjct: 396 EAFDMLERLPYDGIRLSKESYRIVLNFLCKEGELEKAMELLGLMLARGFVPHFATSNELI 455
Query: 233 SGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAAKVL 81
GK + + LL GF P TW ++ +C E++L A ++L
Sbjct: 456 VQQCEAGKAADAAMALFGLLEMGFKPEPQTWSLLIDVICRERKLLPAFQLL 506
Score = 64.3 bits (155), Expect = 7e-08
Identities = 52/254 (20%), Positives = 116/254 (45%), Gaps = 10/254 (3%)
Frame = -3
Query: 779 FCYGILINM---YLEGELIHKAM----GVLELMRKHDCPPNRVVLSSFLNAYAKYSFIPG 621
F GI IN+ Y + L K + +L ++R+ P+ +S+ LN + I
Sbjct: 127 FHEGIFINLMKHYSKSSLHEKVLEMFDAILPIVREK---PSLNAISTCLNLLIEAKQIDL 183
Query: 620 ALS-VFGLMMKTGFTPDATAYTPIISHLCKQGAVDQALDIVEKM-KGEGCPPDVVPYNLI 447
A + + P+ + ++ + C++G V+ A +VE+M K P+++ Y+ +
Sbjct: 184 AREFLLNVQKHLDLKPNTCIFNILVKYHCRKGDVEAAFVVVEEMRKSIVSYPNLITYSTL 243
Query: 446 IAGLCKMDRFEEVDGILDRIL-KNGCTPDKITYEILISHLVNMGDFSQAVVFFEWVNLKK 270
+ GLC+ R +E + +++L ++ PD +TY ILI+ G +A +++
Sbjct: 244 MDGLCRCGRLQEAIDLFEKMLAEDQIPPDALTYNILINAFSRAGKVDRATNIIDFMKKNG 303
Query: 269 IRLGNRTLNPLVSGLANVGKIKELGRVVDTLLGEGFTPYLTTWECMVSAVCSEKELGKAA 90
+ L++G G+ ++ V + G TP + + ++++ C ++ +
Sbjct: 304 CQPNIVNYTALMNGFCKEGRGEDAKEVFHEMKRVGLTPDIVGYTTLINSFCRAGKVDEGI 363
Query: 89 KVLMKVWKSSSKEE 48
++L ++ K +
Sbjct: 364 ELLEEMKDKGCKAD 377