BLASTX nr result
ID: Ephedra29_contig00016437
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00016437
(345 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP50580.1 Retrovirus-related Pol polyprotein from transposon TN... 120 7e-30
AER13172.1 putative gag/pol polyprotein [Phaseolus vulgaris] 120 3e-29
KYP77046.1 Retrovirus-related Pol polyprotein from transposon TN... 117 3e-29
AAW22873.1 putative polyprotein [Solanum lycopersicum] 119 4e-29
OMO51796.1 Reverse transcriptase, RNA-dependent DNA polymerase [... 119 6e-29
XP_017609491.1 PREDICTED: retrovirus-related Pol polyprotein fro... 118 1e-28
KYP40337.1 Retrovirus-related Pol polyprotein from transposon TN... 117 2e-28
CAN79459.1 hypothetical protein VITISV_004379 [Vitis vinifera] 115 2e-28
CAN76896.1 hypothetical protein VITISV_010605 [Vitis vinifera] 117 3e-28
AAV88069.1 hypothetical retrotransposon [Ipomoea batatas] 117 3e-28
JAU88349.1 Retrovirus-related Pol polyprotein from transposon TN... 111 3e-28
CAN62181.1 hypothetical protein VITISV_044399 [Vitis vinifera] 116 5e-28
GAU39612.1 hypothetical protein TSUD_276520 [Trifolium subterran... 116 7e-28
CAN60796.1 hypothetical protein VITISV_015834 [Vitis vinifera] 115 9e-28
KYP66486.1 Retrovirus-related Pol polyprotein from transposon TN... 115 9e-28
KYP63120.1 Retrovirus-related Pol polyprotein from transposon TN... 114 1e-27
KYP52741.1 Retrovirus-related Pol polyprotein from transposon TN... 114 1e-27
CAN69340.1 hypothetical protein VITISV_032634 [Vitis vinifera] 115 1e-27
KYP59970.1 Retrovirus-related Pol polyprotein from transposon TN... 113 1e-27
CAN74198.1 hypothetical protein VITISV_005765 [Vitis vinifera] 115 2e-27
>KYP50580.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 478
Score = 120 bits (301), Expect = 7e-30
Identities = 57/95 (60%), Positives = 73/95 (76%)
Frame = +3
Query: 60 FLDDMLIAGNDMAEIKNLKKEMSRKFEMKDLGEAKQILGIEIIRNRKERKLWMSQEKYIG 239
++DDMLI G D+++I LKK++ F MKD+G AK+ILGI IIR+RK++KLW+SQE YI
Sbjct: 205 YVDDMLIVGKDVSKIDRLKKQLGESFSMKDMGAAKKILGISIIRDRKDKKLWLSQEHYIQ 264
Query: 240 KVLQHFDMENAAAVTTPLAAHFKLSKEDSPKSEKE 344
VLQ F MEN AV+TPLAAHFKLS + P +E E
Sbjct: 265 NVLQRFHMENVKAVSTPLAAHFKLSVKQCPSNEVE 299
>AER13172.1 putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 120 bits (300), Expect = 3e-29
Identities = 56/95 (58%), Positives = 73/95 (76%)
Frame = +3
Query: 60 FLDDMLIAGNDMAEIKNLKKEMSRKFEMKDLGEAKQILGIEIIRNRKERKLWMSQEKYIG 239
++DD+LI G D++ I LKK++S F MKD+G AKQILGI I+R+R+E+KLW+SQE Y+
Sbjct: 952 YVDDILIVGKDISMINRLKKQLSESFAMKDMGAAKQILGIRIMRDRQEKKLWLSQENYVK 1011
Query: 240 KVLQHFDMENAAAVTTPLAAHFKLSKEDSPKSEKE 344
+VLQ F MENA V+TPLA HFKLS + SP E E
Sbjct: 1012 RVLQRFQMENAKVVSTPLATHFKLSTKQSPSYEYE 1046
>KYP77046.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 382
Score = 117 bits (293), Expect = 3e-29
Identities = 56/95 (58%), Positives = 71/95 (74%)
Frame = +3
Query: 60 FLDDMLIAGNDMAEIKNLKKEMSRKFEMKDLGEAKQILGIEIIRNRKERKLWMSQEKYIG 239
++DDMLI G D+++I LKK+ F MKD+G K+ILGI IIR+RK++KLW+S E YI
Sbjct: 184 YVDDMLIVGKDVSKIDRLKKQSGESFAMKDMGADKKILGISIIRDRKDKKLWLSHEHYIQ 243
Query: 240 KVLQHFDMENAAAVTTPLAAHFKLSKEDSPKSEKE 344
KVLQ F MEN AV+TPLAAHFKLS + P +E E
Sbjct: 244 KVLQRFQMENVKAVSTPLAAHFKLSVKQCPSNEAE 278
>AAW22873.1 putative polyprotein [Solanum lycopersicum]
Length = 687
Score = 119 bits (299), Expect = 4e-29
Identities = 58/95 (61%), Positives = 74/95 (77%)
Frame = +3
Query: 60 FLDDMLIAGNDMAEIKNLKKEMSRKFEMKDLGEAKQILGIEIIRNRKERKLWMSQEKYIG 239
++DDMLI G D+ I LK+++S+ F+MKDLG AKQILG+EI R+RK KLW+SQE YI
Sbjct: 368 YVDDMLIVGQDVEMICRLKEDLSKSFDMKDLGPAKQILGMEIARDRKAGKLWLSQENYIE 427
Query: 240 KVLQHFDMENAAAVTTPLAAHFKLSKEDSPKSEKE 344
+VL+ F+M+NA V TPLAAHFKLSK P +EKE
Sbjct: 428 RVLERFNMKNAKPVNTPLAAHFKLSKRCCPTTEKE 462
>OMO51796.1 Reverse transcriptase, RNA-dependent DNA polymerase [Corchorus
capsularis]
Length = 1500
Score = 119 bits (298), Expect = 6e-29
Identities = 55/95 (57%), Positives = 77/95 (81%)
Frame = +3
Query: 60 FLDDMLIAGNDMAEIKNLKKEMSRKFEMKDLGEAKQILGIEIIRNRKERKLWMSQEKYIG 239
++DDMLI G D+ I LK ++SR F+MKDLG AKQILG++IIR+RK KLW+SQEKY+
Sbjct: 1101 YVDDMLIVGQDVELISKLKDDLSRSFDMKDLGPAKQILGMDIIRDRKAGKLWLSQEKYVE 1160
Query: 240 KVLQHFDMENAAAVTTPLAAHFKLSKEDSPKSEKE 344
++L+ F+M++A +V+TPLA HFKL+K+ P SEK+
Sbjct: 1161 RILKRFNMQDAKSVSTPLANHFKLTKKSCPVSEKK 1195
>XP_017609491.1 PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Gossypium arboreum]
Length = 1184
Score = 118 bits (296), Expect = 1e-28
Identities = 56/95 (58%), Positives = 73/95 (76%)
Frame = +3
Query: 60 FLDDMLIAGNDMAEIKNLKKEMSRKFEMKDLGEAKQILGIEIIRNRKERKLWMSQEKYIG 239
++DDMLI G + + I+ LK+E+S+ F MKDLG AKQILGI + R+RK +KLW+SQE+YI
Sbjct: 862 YVDDMLIVGQNASRIEKLKQELSKSFAMKDLGPAKQILGIRLTRDRKAKKLWLSQERYIE 921
Query: 240 KVLQHFDMENAAAVTTPLAAHFKLSKEDSPKSEKE 344
KVLQ F M+ A AV TP A HF+LS + SP +EKE
Sbjct: 922 KVLQKFSMDKAKAVNTPFAMHFRLSVKHSPSTEKE 956
>KYP40337.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1269
Score = 117 bits (294), Expect = 2e-28
Identities = 53/95 (55%), Positives = 81/95 (85%)
Frame = +3
Query: 60 FLDDMLIAGNDMAEIKNLKKEMSRKFEMKDLGEAKQILGIEIIRNRKERKLWMSQEKYIG 239
++DDML+AG++M EI+NLKK++S++F+MKDLG AK+ILG++I R++++ L +SQ +YI
Sbjct: 950 YVDDMLVAGSNMIEIRNLKKQLSKEFDMKDLGPAKKILGMQITRDKQKGTLQLSQAEYIN 1009
Query: 240 KVLQHFDMENAAAVTTPLAAHFKLSKEDSPKSEKE 344
+VLQ F+M NA V+TPLA+HF+LS + SPK+E+E
Sbjct: 1010 RVLQRFNMSNAKPVSTPLASHFRLSTDQSPKTEEE 1044
>CAN79459.1 hypothetical protein VITISV_004379 [Vitis vinifera]
Length = 409
Score = 115 bits (288), Expect = 2e-28
Identities = 55/95 (57%), Positives = 75/95 (78%)
Frame = +3
Query: 60 FLDDMLIAGNDMAEIKNLKKEMSRKFEMKDLGEAKQILGIEIIRNRKERKLWMSQEKYIG 239
++DDMLIAG+D+ +I NLKK++S++F MKDLG AKQILG+ IIR++ L +SQ +Y+
Sbjct: 98 YVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGXAKQILGMRIIRDKANGTLKLSQSEYVK 157
Query: 240 KVLQHFDMENAAAVTTPLAAHFKLSKEDSPKSEKE 344
KVL F+M A V+TPL +HFKLSKE SPK+E+E
Sbjct: 158 KVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEE 192
>CAN76896.1 hypothetical protein VITISV_010605 [Vitis vinifera]
Length = 1146
Score = 117 bits (293), Expect = 3e-28
Identities = 56/95 (58%), Positives = 75/95 (78%)
Frame = +3
Query: 60 FLDDMLIAGNDMAEIKNLKKEMSRKFEMKDLGEAKQILGIEIIRNRKERKLWMSQEKYIG 239
++DDMLIAG+D+ +I NLKK++S++F MKDLG AKQILG+ IIRN+ L +SQ +Y+
Sbjct: 827 YVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRNKANGTLKLSQSEYVK 886
Query: 240 KVLQHFDMENAAAVTTPLAAHFKLSKEDSPKSEKE 344
KVL F+M A V+TPL +HFKLSKE SPK+E+E
Sbjct: 887 KVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEE 921
>AAV88069.1 hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 117 bits (293), Expect = 3e-28
Identities = 55/95 (57%), Positives = 73/95 (76%)
Frame = +3
Query: 60 FLDDMLIAGNDMAEIKNLKKEMSRKFEMKDLGEAKQILGIEIIRNRKERKLWMSQEKYIG 239
++DDMLI G + + I+ LK+E+S+ F MKD+G AKQILG++IIR+R+ +KLW+SQEKYI
Sbjct: 1006 YVDDMLIVGRNASRIQELKQELSKSFSMKDMGPAKQILGMKIIRDRQNKKLWLSQEKYIE 1065
Query: 240 KVLQHFDMENAAAVTTPLAAHFKLSKEDSPKSEKE 344
KVL+ F M A V+TPL HFKL K+ P SEKE
Sbjct: 1066 KVLERFHMNEAKPVSTPLDMHFKLCKKQCPSSEKE 1100
>JAU88349.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Noccaea caerulescens]
Length = 227
Score = 111 bits (278), Expect = 3e-28
Identities = 56/97 (57%), Positives = 72/97 (74%), Gaps = 2/97 (2%)
Frame = +3
Query: 60 FLDDMLIAGNDMAEIKNLKKEMSRKFEMKDLGEAKQILGIEIIRNRKERKLWMSQEKYIG 239
++DDMLI G +++ I+ LKK++ F MKDLG AKQILGI I+R+R ER + +SQEKYI
Sbjct: 92 YVDDMLIVGRNLSRIQELKKQLGMSFAMKDLGPAKQILGIRIVRDRGERLIHLSQEKYIE 151
Query: 240 KVLQHFDMENAAAVTTPLAAHFKLSKEDSP--KSEKE 344
KVLQ F M+ + V TPLA HF+LS + SP KSEKE
Sbjct: 152 KVLQRFQMDKSKVVGTPLAGHFRLSNQQSPSTKSEKE 188
>CAN62181.1 hypothetical protein VITISV_044399 [Vitis vinifera]
Length = 1264
Score = 116 bits (291), Expect = 5e-28
Identities = 55/95 (57%), Positives = 75/95 (78%)
Frame = +3
Query: 60 FLDDMLIAGNDMAEIKNLKKEMSRKFEMKDLGEAKQILGIEIIRNRKERKLWMSQEKYIG 239
++DDMLIAG+D+ +I NLKK++S++F MKDLG AKQILG+ IIR++ L +SQ +Y+
Sbjct: 945 YVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRBKANGTLKLSQSEYVK 1004
Query: 240 KVLQHFDMENAAAVTTPLAAHFKLSKEDSPKSEKE 344
KVL F+M A V+TPL +HFKLSKE SPK+E+E
Sbjct: 1005 KVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEE 1039
>GAU39612.1 hypothetical protein TSUD_276520 [Trifolium subterraneum]
Length = 1403
Score = 116 bits (290), Expect = 7e-28
Identities = 56/95 (58%), Positives = 70/95 (73%)
Frame = +3
Query: 60 FLDDMLIAGNDMAEIKNLKKEMSRKFEMKDLGEAKQILGIEIIRNRKERKLWMSQEKYIG 239
++D MLI G +++ I L K++ MKDLG AKQILGI I+R+RKE+KLWMSQE YI
Sbjct: 768 YVDHMLIVGKNISNIDKLMKQLGESIAMKDLGAAKQILGIRIMRDRKEKKLWMSQEHYIK 827
Query: 240 KVLQHFDMENAAAVTTPLAAHFKLSKEDSPKSEKE 344
+VLQ F MEN+ AV+TPL HFKLS + SP SE E
Sbjct: 828 RVLQRFQMENSKAVSTPLDTHFKLSSQQSPSSEDE 862
>CAN60796.1 hypothetical protein VITISV_015834 [Vitis vinifera]
Length = 1186
Score = 115 bits (289), Expect = 9e-28
Identities = 55/95 (57%), Positives = 75/95 (78%)
Frame = +3
Query: 60 FLDDMLIAGNDMAEIKNLKKEMSRKFEMKDLGEAKQILGIEIIRNRKERKLWMSQEKYIG 239
++DDMLIAG+D+ +I NLKK++S++F MKDLG AKQILG+ IIR++ L +SQ +Y+
Sbjct: 659 YVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANSTLKLSQSEYVK 718
Query: 240 KVLQHFDMENAAAVTTPLAAHFKLSKEDSPKSEKE 344
KVL F+M A V+TPL +HFKLSKE SPK+E+E
Sbjct: 719 KVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEE 753
>KYP66486.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1321
Score = 115 bits (289), Expect = 9e-28
Identities = 54/90 (60%), Positives = 71/90 (78%)
Frame = +3
Query: 60 FLDDMLIAGNDMAEIKNLKKEMSRKFEMKDLGEAKQILGIEIIRNRKERKLWMSQEKYIG 239
++DDMLI G D+ IKNLK E+S+ F+MKD+G AK ILG++IIR+RK KLW+SQE+YI
Sbjct: 1005 YVDDMLIVGQDVQMIKNLKVELSKAFDMKDMGAAKHILGMDIIRDRKAGKLWLSQERYIE 1064
Query: 240 KVLQHFDMENAAAVTTPLAAHFKLSKEDSP 329
+VL+ F+M+NA V TPL HFKLSK+ P
Sbjct: 1065 RVLERFNMKNAKPVITPLVGHFKLSKKSCP 1094
>KYP63120.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 501
Score = 114 bits (286), Expect = 1e-27
Identities = 54/95 (56%), Positives = 71/95 (74%)
Frame = +3
Query: 60 FLDDMLIAGNDMAEIKNLKKEMSRKFEMKDLGEAKQILGIEIIRNRKERKLWMSQEKYIG 239
++DDMLI G D +I LKK++S+ F MKDLG AKQILG+ I R+R +R LW+SQE+YI
Sbjct: 179 YVDDMLIVGQDRIKIAALKKDLSKSFAMKDLGPAKQILGMRITRDRSKRLLWLSQERYIE 238
Query: 240 KVLQHFDMENAAAVTTPLAAHFKLSKEDSPKSEKE 344
KVL+ F+M+ V TPLA HF+LS + SP SE+E
Sbjct: 239 KVLEQFNMDKCKPVNTPLAGHFRLSSKQSPTSERE 273
>KYP52741.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 468
Score = 114 bits (285), Expect = 1e-27
Identities = 55/95 (57%), Positives = 71/95 (74%)
Frame = +3
Query: 60 FLDDMLIAGNDMAEIKNLKKEMSRKFEMKDLGEAKQILGIEIIRNRKERKLWMSQEKYIG 239
++D+MLI G D + I LKK++ F MKD+G AKQIL I IIR+R++ K W+SQE+YI
Sbjct: 241 YVDNMLIVGKDASRIDKLKKQLGESFVMKDMGVAKQILSIRIIRDREKGKFWLSQEQYIK 300
Query: 240 KVLQHFDMENAAAVTTPLAAHFKLSKEDSPKSEKE 344
+VLQ F MENA AV+TPLA HFKLS + SP +E E
Sbjct: 301 RVLQRFQMENAKAVSTPLATHFKLSVKQSPTNEAE 335
>CAN69340.1 hypothetical protein VITISV_032634 [Vitis vinifera]
Length = 1298
Score = 115 bits (288), Expect = 1e-27
Identities = 55/95 (57%), Positives = 75/95 (78%)
Frame = +3
Query: 60 FLDDMLIAGNDMAEIKNLKKEMSRKFEMKDLGEAKQILGIEIIRNRKERKLWMSQEKYIG 239
++DDMLIAG+D+ +I NLKK++S++F MKDLG AKQILG+ IIR++ L +SQ +Y+
Sbjct: 979 YVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVK 1038
Query: 240 KVLQHFDMENAAAVTTPLAAHFKLSKEDSPKSEKE 344
KVL F+M A V+TPL +HFKLSKE SPK+E+E
Sbjct: 1039 KVLSRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEE 1073
>KYP59970.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 412
Score = 113 bits (283), Expect = 1e-27
Identities = 54/95 (56%), Positives = 72/95 (75%)
Frame = +3
Query: 60 FLDDMLIAGNDMAEIKNLKKEMSRKFEMKDLGEAKQILGIEIIRNRKERKLWMSQEKYIG 239
++DDMLI D++ I LKK++ F MKD+G AKQILGI IIR+R++ KLW+SQE+YI
Sbjct: 88 YVDDMLIVRKDVSRIDRLKKKLGESFAMKDMGAAKQILGIRIIRDREKWKLWLSQEQYIK 147
Query: 240 KVLQHFDMENAAAVTTPLAAHFKLSKEDSPKSEKE 344
+VLQ F +ENA AV+TP A HFKLS + SP ++ E
Sbjct: 148 RVLQRFQIENAKAVSTPFATHFKLSVKQSPSNKAE 182
>CAN74198.1 hypothetical protein VITISV_005765 [Vitis vinifera]
Length = 1261
Score = 115 bits (287), Expect = 2e-27
Identities = 55/95 (57%), Positives = 75/95 (78%)
Frame = +3
Query: 60 FLDDMLIAGNDMAEIKNLKKEMSRKFEMKDLGEAKQILGIEIIRNRKERKLWMSQEKYIG 239
++DDMLIAG+D+ +I NLKK++S++F MKDLG AKQILG+ IIR++ L +SQ +Y+
Sbjct: 942 YVDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVK 1001
Query: 240 KVLQHFDMENAAAVTTPLAAHFKLSKEDSPKSEKE 344
KVL F+M A V+TPL +HFKLSKE SPK+E+E
Sbjct: 1002 KVLXRFNMNEAKPVSTPLGSHFKLSKEQSPKTEEE 1036