BLASTX nr result

ID: Ephedra29_contig00016295 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00016295
         (847 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ABU98655.1 SRC2 protein [Taiwania cryptomerioides]                     61   3e-07
ACN40336.1 unknown [Picea sitchensis]                                  60   1e-06
ABR17336.1 unknown [Picea sitchensis]                                  58   3e-06

>ABU98655.1 SRC2 protein [Taiwania cryptomerioides]
          Length = 324

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 46/172 (26%), Positives = 87/172 (50%), Gaps = 7/172 (4%)
 Frame = -3

Query: 764 MDKRELEIAIVSAKNLSVQTVASSNAKVYGIISLVNGSEFSQWKT-SEAEDVMNPKWDEV 588
           M+ R +E+ ++SA+++    + + + KVY +  +      ++ +T S+ E+  NP W++ 
Sbjct: 1   METRTIEVTLISARDIQDVNLFTKS-KVYAVAWIRGDPRPTKQRTVSDKENGTNPSWNKS 59

Query: 587 IKMVLDEGTIQHGPAHLLIPVCVKKENATHDLQFGWLSLPLRSFLSH--VGMLVVRDYPL 414
           +   +DE  +Q G   L++ V ++ E    D + G +S+P++ FL     G +    Y +
Sbjct: 60  MSFAVDEAALQQG--RLVLEVEIRSEGTFGDKEVGHVSVPMKEFLGKKPTGGVDFVSYQV 117

Query: 413 ESIQGPP--TLELGVKLSDKLIPDVSMAATQPTVMSMPAN--LSTCYFHSPP 270
               G    TL L VKL++  +  V   A +P+V   PAN   +T Y  + P
Sbjct: 118 RKPSGKAKGTLNLSVKLNNTAV--VKQPAYEPSVFQYPANGSAATAYGATAP 167


>ACN40336.1 unknown [Picea sitchensis]
          Length = 304

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 9/169 (5%)
 Frame = -3

Query: 764 MDKRELEIAIVSAKNLSVQTVASSNAKVYGIISLVNGSEFSQWKTSEAEDVMNPKWDEVI 585
           M+ R +EI I+SA++L+  T   S  K Y +  + N     Q    + +   +P W++V+
Sbjct: 1   MESRSMEITIISARDLN-NTNILSKTKAYAVAWISNDHRNRQRTPLDKDHGTHPTWNQVM 59

Query: 584 KMVLDEGTIQHGPAHLLIPVCVKKENATHDLQFGWLSLPLRSFLSHVG---------MLV 432
           K  LDE  +Q G   L++ + +  +    D + G +S+PL  FL   G           V
Sbjct: 60  KFNLDEAALQQG--RLVLEIAIYADATFGDKEIGRVSIPLNEFLKPAGGNKGATTSAQFV 117

Query: 431 VRDYPLESIQGPPTLELGVKLSDKLIPDVSMAATQPTVMSMPANLSTCY 285
                  S +   T+ L VKL++K  P+V   A   +  +  A  +T Y
Sbjct: 118 SYQVRKPSGKAKGTINLSVKLAEK--PEVKPQAVAGSYGAGKAEPATAY 164


>ABR17336.1 unknown [Picea sitchensis]
          Length = 304

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 9/169 (5%)
 Frame = -3

Query: 764 MDKRELEIAIVSAKNLSVQTVASSNAKVYGIISLVNGSEFSQWKTSEAEDVMNPKWDEVI 585
           M+ R +EI ++SA++L+  T   S  K Y +  + N     Q    + +   +P W++V+
Sbjct: 1   MESRSMEITLISARDLN-NTNILSKTKAYAVAWISNDHRNRQRTPLDKDHGTDPTWNQVM 59

Query: 584 KMVLDEGTIQHGPAHLLIPVCVKKENATHDLQFGWLSLPLRSFLSHVG---------MLV 432
           K  LDE  +Q G   L++ + +  +    D + G +S+PL  FL   G           V
Sbjct: 60  KFNLDEAALQQG--RLVLEIAIYADATFGDKEIGHVSIPLNEFLKPAGGNKGATTSAQFV 117

Query: 431 VRDYPLESIQGPPTLELGVKLSDKLIPDVSMAATQPTVMSMPANLSTCY 285
                  S +   T+ L VKL++K  P+V   A   +  +  A   T Y
Sbjct: 118 SYQVRKPSGKAKGTINLSVKLAEK--PEVKPQAVAGSYGAGKAEPVTAY 164


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