BLASTX nr result

ID: Ephedra29_contig00016254 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00016254
         (880 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CDP13635.1 unnamed protein product [Coffea canephora]                  62   5e-07
OAY51311.1 hypothetical protein MANES_05G204500 [Manihot esculen...    60   3e-06
XP_012473215.1 PREDICTED: uncharacterized protein LOC105790262 [...    59   6e-06
XP_016705096.1 PREDICTED: uncharacterized protein LOC107920088 [...    59   6e-06

>CDP13635.1 unnamed protein product [Coffea canephora]
          Length = 747

 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 47/122 (38%), Positives = 59/122 (48%)
 Frame = +2

Query: 410 SSSIEFAGSDRVNGRIDDKFELQFALAKPVVDQQSLENHIPTSRQGFSIRGYVAQLRSKD 589
           SSS E A SD+    + D       L K  +D  + + H PT +  FSIR YV   R KD
Sbjct: 19  SSSDEKASSDKQQPHLVD-------LLKSDLDDHNKDIHNPTPK--FSIRDYVFNTRGKD 69

Query: 590 ISKCWPFSEGLLQLSLKDGDNPLLPPLDSAEHGTNGLVSTERETLSQTQSTVCEEKEDVI 769
           I   WPFS+  LQL LK G   LLPP  S++   N  +       S   S+   EKE+  
Sbjct: 70  IKNSWPFSQENLQLCLKHGVTNLLPPFQSSDTLRNPSLE------SFQVSSFLSEKENTS 123

Query: 770 NS 775
           NS
Sbjct: 124 NS 125


>OAY51311.1 hypothetical protein MANES_05G204500 [Manihot esculenta] OAY51312.1
           hypothetical protein MANES_05G204500 [Manihot esculenta]
           OAY51313.1 hypothetical protein MANES_05G204500 [Manihot
           esculenta]
          Length = 1462

 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 50/159 (31%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
 Frame = +2

Query: 440 RVNGRIDDKFELQFALAKPVVDQQSLENHIPTSRQGFSIRGYVAQLRSKDISKCWPFSEG 619
           ++N   D++  L+  L +  +    L++H P     FSIR YV   RSKDI K WPFS+ 
Sbjct: 19  QLNSSSDERASLKLPLPEVDLPNPPLDHHTPLPN--FSIRDYVFTARSKDIKKNWPFSQK 76

Query: 620 LLQLSLKDGDNPLLPPL--------DSAEHGTNGLVSTERETLSQ------TQSTVCEEK 757
            LQL LK G   +LPP          S +  T    S E++  S           V +  
Sbjct: 77  NLQLCLKHGVKDVLPPFQPLASVRNQSLKRCTVETTSLEKQNTSDLYKEQPDNHVVLDSS 136

Query: 758 EDVINSEIIKASLVEEQECTVRAPSLEENGRNSVEASNS 874
           +DV  +  +  S ++   C  R    EEN   S  AS S
Sbjct: 137 DDVQLNNKLADSCLDISSCRSR----EENDFPSTTASVS 171


>XP_012473215.1 PREDICTED: uncharacterized protein LOC105790262 [Gossypium
           raimondii] XP_012473216.1 PREDICTED: uncharacterized
           protein LOC105790262 [Gossypium raimondii]
           XP_012473217.1 PREDICTED: uncharacterized protein
           LOC105790262 [Gossypium raimondii] XP_012473218.1
           PREDICTED: uncharacterized protein LOC105790262
           [Gossypium raimondii] KJB22193.1 hypothetical protein
           B456_004G034500 [Gossypium raimondii]
          Length = 1251

 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 50/144 (34%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
 Frame = +2

Query: 410 SSSIEFAGSDRVNGRIDDKFELQFALAKPVVDQQSLENHIPTSRQGFSIRGYVAQLRSKD 589
           S S +F GSD       D+ +L   L +P +D    +N +P     FSIR YV   RSKD
Sbjct: 12  SCSPQFTGSD-------DEVDL---LKQPSLDHHHHKNPLPN----FSIRDYVFNGRSKD 57

Query: 590 ISKCWPFSEGLLQLSLKDGDNPLLPP---LDSAEHGTNGLVSTERETLSQTQSTVCEEKE 760
           I++ WPFS   LQL LK G    LPP   LD   +        E   + + +ST    + 
Sbjct: 58  INRNWPFSSESLQLVLKHGMKDPLPPFQHLDIVRNQPKETHVVETNPIEKQRST----RH 113

Query: 761 DVINSEIIKASLVEEQECTVRAPS 832
            V++S  I + LV++Q  +V   S
Sbjct: 114 GVLDSYDIDSVLVDKQSISVEEGS 137


>XP_016705096.1 PREDICTED: uncharacterized protein LOC107920088 [Gossypium
           hirsutum] XP_016705097.1 PREDICTED: uncharacterized
           protein LOC107920088 [Gossypium hirsutum] XP_016705098.1
           PREDICTED: uncharacterized protein LOC107920088
           [Gossypium hirsutum]
          Length = 1266

 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 51/144 (35%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
 Frame = +2

Query: 410 SSSIEFAGSDRVNGRIDDKFELQFALAKPVVDQQSLENHIPTSRQGFSIRGYVAQLRSKD 589
           S S +F GSD       D+ +L   L +P +D    +N +P     FSIR YV   RSKD
Sbjct: 12  SCSPQFTGSD-------DEVDL---LKQPSLDHHHHKNPLPN----FSIRDYVFNGRSKD 57

Query: 590 ISKCWPFSEGLLQLSLKDGDNPLLPP---LDSAEHGTNGLVSTERETLSQTQSTVCEEKE 760
           I+K WPFS   LQL LK G    LPP   LD   +        E   + + +ST      
Sbjct: 58  INKNWPFSSESLQLVLKHGMKDPLPPFQHLDIVRNQPKETHVVETNPIEKQRST----HH 113

Query: 761 DVINSEIIKASLVEEQECTVRAPS 832
            V++S  I + LV++Q  +V   S
Sbjct: 114 GVLDSYDIDSVLVDKQSISVEEGS 137


Top