BLASTX nr result
ID: Ephedra29_contig00016213
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00016213
(542 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_013738589.1 PREDICTED: pentatricopeptide repeat-containing pr... 86 4e-16
XP_009140477.1 PREDICTED: pentatricopeptide repeat-containing pr... 86 4e-16
XP_018472342.1 PREDICTED: pentatricopeptide repeat-containing pr... 84 2e-15
XP_013617779.1 PREDICTED: pentatricopeptide repeat-containing pr... 82 8e-15
XP_010523919.1 PREDICTED: pentatricopeptide repeat-containing pr... 82 8e-15
XP_013733866.1 PREDICTED: pentatricopeptide repeat-containing pr... 81 1e-14
XP_010437286.1 PREDICTED: pentatricopeptide repeat-containing pr... 81 1e-14
XP_018463702.1 PREDICTED: pentatricopeptide repeat-containing pr... 75 4e-14
XP_011466821.1 PREDICTED: pentatricopeptide repeat-containing pr... 79 5e-14
XP_011466820.1 PREDICTED: pentatricopeptide repeat-containing pr... 79 5e-14
XP_010432322.1 PREDICTED: pentatricopeptide repeat-containing pr... 79 5e-14
XP_006411944.1 hypothetical protein EUTSA_v10026762mg [Eutrema s... 79 7e-14
XP_009403565.1 PREDICTED: pentatricopeptide repeat-containing pr... 79 9e-14
XP_010109227.1 hypothetical protein L484_011849 [Morus notabilis... 79 1e-13
XP_019261749.1 PREDICTED: pentatricopeptide repeat-containing pr... 78 1e-13
XP_008241553.2 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide... 78 1e-13
XP_008454057.1 PREDICTED: pentatricopeptide repeat-containing pr... 78 2e-13
XP_006403701.1 hypothetical protein EUTSA_v10010938mg [Eutrema s... 78 2e-13
OAY52281.1 hypothetical protein MANES_04G070600 [Manihot esculenta] 78 2e-13
CDX69260.1 BnaC01g01930D [Brassica napus] 77 2e-13
>XP_013738589.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Brassica napus]
Length = 685
Score = 85.5 bits (210), Expect = 4e-16
Identities = 35/68 (51%), Positives = 51/68 (75%)
Frame = -2
Query: 205 LLRDCIRVRSLKDGKKTHQKMLKNGFIIDTYLCNLLISMYAKCGSFEDARKVFNEMPHRD 26
L++ C + R+L++GKK H+ ++ +GF+ +CN L+ MYAKCGS DARKVF+EMPHRD
Sbjct: 85 LIQICTQRRALEEGKKVHEHIIASGFVPGVVICNRLMGMYAKCGSLVDARKVFDEMPHRD 144
Query: 25 AISWNTII 2
SWN ++
Sbjct: 145 VCSWNVMV 152
>XP_009140477.1 PREDICTED: pentatricopeptide repeat-containing protein At4g37170
[Brassica rapa]
Length = 685
Score = 85.5 bits (210), Expect = 4e-16
Identities = 35/68 (51%), Positives = 51/68 (75%)
Frame = -2
Query: 205 LLRDCIRVRSLKDGKKTHQKMLKNGFIIDTYLCNLLISMYAKCGSFEDARKVFNEMPHRD 26
L++ C + R+L++GKK H+ ++ +GF+ +CN L+ MYAKCGS DARKVF+EMPHRD
Sbjct: 85 LIQICTQRRALEEGKKVHEHIIASGFVPGVVICNRLMGMYAKCGSLVDARKVFDEMPHRD 144
Query: 25 AISWNTII 2
SWN ++
Sbjct: 145 VCSWNVMV 152
>XP_018472342.1 PREDICTED: pentatricopeptide repeat-containing protein At4g37170
[Raphanus sativus] XP_018472352.1 PREDICTED:
pentatricopeptide repeat-containing protein
At4g37170-like [Raphanus sativus]
Length = 695
Score = 83.6 bits (205), Expect = 2e-15
Identities = 36/68 (52%), Positives = 49/68 (72%)
Frame = -2
Query: 205 LLRDCIRVRSLKDGKKTHQKMLKNGFIIDTYLCNLLISMYAKCGSFEDARKVFNEMPHRD 26
L+R C + R+L++GKK HQ + +GF+ +CN L+ MY+KCGS DARKVF+EMP RD
Sbjct: 93 LIRICTQKRALEEGKKVHQHIRASGFVPGIVICNRLMGMYSKCGSLVDARKVFDEMPRRD 152
Query: 25 AISWNTII 2
SWN I+
Sbjct: 153 VCSWNVIV 160
>XP_013617779.1 PREDICTED: pentatricopeptide repeat-containing protein At4g37170
[Brassica oleracea var. oleracea]
Length = 685
Score = 81.6 bits (200), Expect = 8e-15
Identities = 34/68 (50%), Positives = 50/68 (73%)
Frame = -2
Query: 205 LLRDCIRVRSLKDGKKTHQKMLKNGFIIDTYLCNLLISMYAKCGSFEDARKVFNEMPHRD 26
L++ C + R+L++GKK H+ ++ +GF+ +CN L+ MYAKCGS DARKVF+EMP RD
Sbjct: 85 LIQICTQRRALEEGKKVHRHIIASGFVPGVVICNRLMRMYAKCGSLVDARKVFDEMPQRD 144
Query: 25 AISWNTII 2
SWN ++
Sbjct: 145 VCSWNVMV 152
>XP_010523919.1 PREDICTED: pentatricopeptide repeat-containing protein At4g37170
[Tarenaya hassleriana]
Length = 693
Score = 81.6 bits (200), Expect = 8e-15
Identities = 35/68 (51%), Positives = 50/68 (73%)
Frame = -2
Query: 205 LLRDCIRVRSLKDGKKTHQKMLKNGFIIDTYLCNLLISMYAKCGSFEDARKVFNEMPHRD 26
L++ C R+R+L++GKK H+ + + GF+ +CN L+ MYAKCGS DARK+F+EM RD
Sbjct: 93 LIQFCCRIRALEEGKKVHEHIKRCGFVPGVVICNRLLDMYAKCGSLLDARKLFDEMSSRD 152
Query: 25 AISWNTII 2
SWNT+I
Sbjct: 153 LCSWNTMI 160
>XP_013733866.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Brassica napus]
Length = 685
Score = 81.3 bits (199), Expect = 1e-14
Identities = 34/68 (50%), Positives = 49/68 (72%)
Frame = -2
Query: 205 LLRDCIRVRSLKDGKKTHQKMLKNGFIIDTYLCNLLISMYAKCGSFEDARKVFNEMPHRD 26
L++ C + R+L++GKK H+ + +GF+ +CN L+ MYAKCGS DARKVF+EMP RD
Sbjct: 85 LIQICTQRRALEEGKKVHRHIRTSGFVPGVVICNRLVGMYAKCGSLVDARKVFDEMPQRD 144
Query: 25 AISWNTII 2
SWN ++
Sbjct: 145 VCSWNVMV 152
>XP_010437286.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Camelina sativa]
Length = 701
Score = 80.9 bits (198), Expect = 1e-14
Identities = 33/68 (48%), Positives = 50/68 (73%)
Frame = -2
Query: 205 LLRDCIRVRSLKDGKKTHQKMLKNGFIIDTYLCNLLISMYAKCGSFEDARKVFNEMPHRD 26
L++ C ++R+L++GKK H+ + +GF+ +CN L+ MYAKCGS DARKVF++MP RD
Sbjct: 100 LIQVCSQIRALEEGKKVHEHIRTSGFVPGIVICNRLLGMYAKCGSLVDARKVFDDMPKRD 159
Query: 25 AISWNTII 2
SWN ++
Sbjct: 160 VCSWNLMV 167
>XP_018463702.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Raphanus sativus]
Length = 149
Score = 75.5 bits (184), Expect = 4e-14
Identities = 34/69 (49%), Positives = 48/69 (69%)
Frame = -2
Query: 208 ILLRDCIRVRSLKDGKKTHQKMLKNGFIIDTYLCNLLISMYAKCGSFEDARKVFNEMPHR 29
I+L+ R+R++ +G+K H LK+G +D Y+CN L+ MYA G E ARKVF+EMP R
Sbjct: 49 IILKSIGRLRNVAEGEKIHGYALKSGLNLDPYVCNSLMGMYAALGKMEIARKVFDEMPER 108
Query: 28 DAISWNTII 2
D +SWN +I
Sbjct: 109 DVVSWNGLI 117
>XP_011466821.1 PREDICTED: pentatricopeptide repeat-containing protein At2g13600
isoform X2 [Fragaria vesca subsp. vesca]
Length = 708
Score = 79.3 bits (194), Expect = 5e-14
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -2
Query: 205 LLRDCIRVRSLKDGKKTHQKMLKNGFIIDTYLCNLLISMYAKCGSFEDARKVFNEMPHRD 26
LL CIR +S +D ++ H +++K F + ++ N LI YAKCGSF+DARKVF++MP R+
Sbjct: 24 LLDSCIRAKSARDARRVHARLIKTQFSSEVFVHNRLIDAYAKCGSFDDARKVFDKMPERN 83
Query: 25 AISWNTII 2
SWN II
Sbjct: 84 TFSWNCII 91
Score = 59.7 bits (143), Expect = 3e-07
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Frame = -2
Query: 205 LLRDCIRVRSLKDGKKTHQKMLKNGFII------DTYLCNLLISMYAKCGSFEDARKVFN 44
LL C + L+ G++ H +LK+GF D ++ N LI MY KCGS ED ++F
Sbjct: 390 LLNACASLVDLQLGRQAHSHILKHGFQFQVGEEPDIFVGNSLIDMYMKCGSIEDGCRIFR 449
Query: 43 EMPHRDAISWNTII 2
M RD +SWN +I
Sbjct: 450 NMLERDHVSWNAMI 463
>XP_011466820.1 PREDICTED: pentatricopeptide repeat-containing protein At2g13600
isoform X1 [Fragaria vesca subsp. vesca]
Length = 735
Score = 79.3 bits (194), Expect = 5e-14
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -2
Query: 205 LLRDCIRVRSLKDGKKTHQKMLKNGFIIDTYLCNLLISMYAKCGSFEDARKVFNEMPHRD 26
LL CIR +S +D ++ H +++K F + ++ N LI YAKCGSF+DARKVF++MP R+
Sbjct: 24 LLDSCIRAKSARDARRVHARLIKTQFSSEVFVHNRLIDAYAKCGSFDDARKVFDKMPERN 83
Query: 25 AISWNTII 2
SWN II
Sbjct: 84 TFSWNCII 91
Score = 59.7 bits (143), Expect = 3e-07
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Frame = -2
Query: 205 LLRDCIRVRSLKDGKKTHQKMLKNGFII------DTYLCNLLISMYAKCGSFEDARKVFN 44
LL C + L+ G++ H +LK+GF D ++ N LI MY KCGS ED ++F
Sbjct: 390 LLNACASLVDLQLGRQAHSHILKHGFQFQVGEEPDIFVGNSLIDMYMKCGSIEDGCRIFR 449
Query: 43 EMPHRDAISWNTII 2
M RD +SWN +I
Sbjct: 450 NMLERDHVSWNAMI 463
>XP_010432322.1 PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Camelina sativa]
Length = 806
Score = 79.3 bits (194), Expect = 5e-14
Identities = 35/68 (51%), Positives = 47/68 (69%)
Frame = -2
Query: 205 LLRDCIRVRSLKDGKKTHQKMLKNGFIIDTYLCNLLISMYAKCGSFEDARKVFNEMPHRD 26
+++ + S +DGKK H ++K GF+ D Y+CN LISMY K G DA KVFNEMP RD
Sbjct: 133 VIKSVAGILSAEDGKKIHAMVIKLGFVSDVYVCNSLISMYMKLGCAWDAEKVFNEMPERD 192
Query: 25 AISWNTII 2
+SWN++I
Sbjct: 193 IVSWNSLI 200
Score = 62.0 bits (149), Expect = 5e-08
Identities = 26/59 (44%), Positives = 41/59 (69%)
Frame = -2
Query: 178 SLKDGKKTHQKMLKNGFIIDTYLCNLLISMYAKCGSFEDARKVFNEMPHRDAISWNTII 2
SL +G++ H ++K+ ++ +T + N LI MYA CG +DARK FN + +D +SWN+II
Sbjct: 444 SLSEGRQIHAYIVKSRYVSNTIILNSLIHMYAMCGDLDDARKCFNHVLVKDVVSWNSII 502
>XP_006411944.1 hypothetical protein EUTSA_v10026762mg [Eutrema salsugineum]
ESQ53397.1 hypothetical protein EUTSA_v10026762mg
[Eutrema salsugineum]
Length = 694
Score = 79.0 bits (193), Expect = 7e-14
Identities = 32/68 (47%), Positives = 50/68 (73%)
Frame = -2
Query: 205 LLRDCIRVRSLKDGKKTHQKMLKNGFIIDTYLCNLLISMYAKCGSFEDARKVFNEMPHRD 26
L++ C + R+L++GKK H+ + +GF+ +CN L+ MYAKCGS DARK+F+EMP++D
Sbjct: 94 LIQVCSQKRALEEGKKVHEHIKNSGFVPGVVICNRLLGMYAKCGSLIDARKLFDEMPNKD 153
Query: 25 AISWNTII 2
SWN ++
Sbjct: 154 VCSWNIMV 161
>XP_009403565.1 PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Musa acuminata subsp. malaccensis]
Length = 687
Score = 78.6 bits (192), Expect = 9e-14
Identities = 34/69 (49%), Positives = 49/69 (71%)
Frame = -2
Query: 208 ILLRDCIRVRSLKDGKKTHQKMLKNGFIIDTYLCNLLISMYAKCGSFEDARKVFNEMPHR 29
+LL+DCI SL+DG+ H ++LK F +T++ N L+ YAKCGS EDARK+F+ M HR
Sbjct: 25 LLLQDCIDSNSLRDGRCIHGRLLKTPFSSETFIQNRLLDAYAKCGSLEDARKLFDRMDHR 84
Query: 28 DAISWNTII 2
+ +WN+ I
Sbjct: 85 NVFTWNSFI 93
Score = 58.5 bits (140), Expect = 8e-07
Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Frame = -2
Query: 205 LLRDCIRVRSLKDGKKTHQKMLKNGF------IIDTYLCNLLISMYAKCGSFEDARKVFN 44
+L C + +L+ GK+ H +LK+GF + D ++ N L+ MY K GS +D K F+
Sbjct: 392 ILNACANLANLQLGKQAHAHVLKHGFRFEAGAVSDIFVGNSLVDMYLKSGSIDDGSKAFD 451
Query: 43 EMPHRDAISWNTII 2
+M RD +SWN +I
Sbjct: 452 KMIARDKVSWNAMI 465
>XP_010109227.1 hypothetical protein L484_011849 [Morus notabilis] EXC21407.1
hypothetical protein L484_011849 [Morus notabilis]
Length = 841
Score = 78.6 bits (192), Expect = 1e-13
Identities = 41/122 (33%), Positives = 66/122 (54%)
Frame = -2
Query: 367 PYTTCYLRPDTLDNQLHCSLQKNSCVYVSEVSLSRYRASDTYEKFGLEYKRCDILLRDCI 188
P Y L + C L + + + E+ L E GLE+ ++ + C
Sbjct: 106 PLRNLYAWTAILSVYVDCGLYEEALFHFMELQL---------EDVGLEFFVFPVVFKICS 156
Query: 187 RVRSLKDGKKTHQKMLKNGFIIDTYLCNLLISMYAKCGSFEDARKVFNEMPHRDAISWNT 8
+R+L+ G++ H ++K+ FI + Y+ N LI MY KCGS EDA+KV +MP +D +SWN+
Sbjct: 157 GLRALELGRQLHGIVVKSRFITNLYVGNALIDMYGKCGSLEDAKKVLEKMPEKDCVSWNS 216
Query: 7 II 2
I+
Sbjct: 217 IV 218
>XP_019261749.1 PREDICTED: pentatricopeptide repeat-containing protein At5g04780
[Nicotiana attenuata] OIT38283.1 pentatricopeptide
repeat-containing protein [Nicotiana attenuata]
Length = 624
Score = 78.2 bits (191), Expect = 1e-13
Identities = 32/67 (47%), Positives = 50/67 (74%)
Frame = -2
Query: 202 LRDCIRVRSLKDGKKTHQKMLKNGFIIDTYLCNLLISMYAKCGSFEDARKVFNEMPHRDA 23
+++C + R+ +GK H +++K G+ DT N+LI+MY+KCGS + ARKVF+EMPHR
Sbjct: 57 VQECAKDRAAMNGKSVHSQIIKFGYEADTLTTNMLINMYSKCGSVDFARKVFDEMPHRTL 116
Query: 22 ISWNTII 2
+SWNT++
Sbjct: 117 VSWNTLM 123
>XP_008241553.2 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g37170 [Prunus mume]
Length = 673
Score = 78.2 bits (191), Expect = 1e-13
Identities = 37/75 (49%), Positives = 49/75 (65%)
Frame = -2
Query: 226 EYKRCDILLRDCIRVRSLKDGKKTHQKMLKNGFIIDTYLCNLLISMYAKCGSFEDARKVF 47
E KR LL+ C++ R+L GK H +GF+ ++CN LI +YAKCGS DA+KVF
Sbjct: 66 EQKRLSTLLQLCLQQRALVQGKLVHAHTKVSGFMPGLFICNRLIDLYAKCGSLVDAQKVF 125
Query: 46 NEMPHRDAISWNTII 2
+EM RD SWNT+I
Sbjct: 126 DEMSERDLCSWNTMI 140
Score = 55.8 bits (133), Expect = 6e-06
Identities = 22/61 (36%), Positives = 41/61 (67%)
Frame = -2
Query: 184 VRSLKDGKKTHQKMLKNGFIIDTYLCNLLISMYAKCGSFEDARKVFNEMPHRDAISWNTI 5
++SL+ GK+ H +++ G D + + L MY KCGS ++A+++F++M +RD +SW +
Sbjct: 213 IQSLRLGKEIHGYIMRTGLDSDEVVWSALSDMYGKCGSIDEAKRIFDKMVNRDVVSWTAM 272
Query: 4 I 2
I
Sbjct: 273 I 273
>XP_008454057.1 PREDICTED: pentatricopeptide repeat-containing protein At4g37170
[Cucumis melo] XP_008454058.1 PREDICTED:
pentatricopeptide repeat-containing protein At4g37170
[Cucumis melo] XP_008454059.1 PREDICTED:
pentatricopeptide repeat-containing protein At4g37170
[Cucumis melo] XP_016901557.1 PREDICTED:
pentatricopeptide repeat-containing protein At4g37170
[Cucumis melo]
Length = 686
Score = 77.8 bits (190), Expect = 2e-13
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -2
Query: 205 LLRDCIRVRSLKDGKKTHQKMLKNGFIIDTYLCNLLISMYAKCGSFEDARKVFNEMPHRD 26
L+ C++ R+L++GKK H + +GF++ +L N L+ MYAKCGS DA KVF+EM RD
Sbjct: 86 LVEFCLKQRALEEGKKVHAHIKASGFVLGLFLSNRLLDMYAKCGSLVDAEKVFDEMVRRD 145
Query: 25 AISWNTII 2
SWNT+I
Sbjct: 146 LCSWNTMI 153
>XP_006403701.1 hypothetical protein EUTSA_v10010938mg [Eutrema salsugineum]
ESQ45154.1 hypothetical protein EUTSA_v10010938mg
[Eutrema salsugineum]
Length = 768
Score = 77.8 bits (190), Expect = 2e-13
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -2
Query: 205 LLRDCIRVRSLKDGKKTHQKMLKNGFIIDTYLCNLLISMYAKCGSFEDARKVFNEMPHRD 26
LLR C+ + SLK G + H LK G +++ ++ N LI MYAKCGS E AR+VF+ M +RD
Sbjct: 479 LLRACVEISSLKLGSQVHCYNLKTGLVLEQFITNGLIDMYAKCGSMEQARRVFDSMDNRD 538
Query: 25 AISWNTII 2
+SW+T+I
Sbjct: 539 VVSWSTLI 546
Score = 67.0 bits (162), Expect = 9e-10
Identities = 35/91 (38%), Positives = 51/91 (56%)
Frame = -2
Query: 274 SLSRYRASDTYEKFGLEYKRCDILLRDCIRVRSLKDGKKTHQKMLKNGFIIDTYLCNLLI 95
+L + S F + K L+ C RSL G+K H +LK+ DT L N ++
Sbjct: 50 ALEAFHFSHKNSSFKISLKTYVSLICACSSSRSLAQGRKIHDHILKSNCKHDTILNNHIL 109
Query: 94 SMYAKCGSFEDARKVFNEMPHRDAISWNTII 2
SMY KCGS DAR+VF+ MP R+ +S+ ++I
Sbjct: 110 SMYGKCGSLRDARQVFDLMPQRNLVSYTSVI 140
>OAY52281.1 hypothetical protein MANES_04G070600 [Manihot esculenta]
Length = 805
Score = 77.8 bits (190), Expect = 2e-13
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -2
Query: 205 LLRDCIRVRSLKDGKKTHQKMLKNGFIIDTYLCNLLISMYAKCGSFEDARKVFNEMPHRD 26
+++ C R+ SL DG+K H K++KNG +D Y+CN LI MY K G E A K+F EMP RD
Sbjct: 136 VIKACGRLLSLFDGQKVHGKLIKNGLDVDLYVCNSLIDMYFKLGLTEYAEKIFEEMPVRD 195
Query: 25 AISWNTII 2
+SWN+++
Sbjct: 196 LVSWNSMV 203
>CDX69260.1 BnaC01g01930D [Brassica napus]
Length = 629
Score = 77.4 bits (189), Expect = 2e-13
Identities = 32/68 (47%), Positives = 49/68 (72%)
Frame = -2
Query: 205 LLRDCIRVRSLKDGKKTHQKMLKNGFIIDTYLCNLLISMYAKCGSFEDARKVFNEMPHRD 26
L++ C + R++++GKK H+ ++ +GF+ +CN L+ MYAKCGS DARKVF+EM RD
Sbjct: 85 LIQICTQRRAIEEGKKVHRHIIASGFVPGVVICNRLMRMYAKCGSLVDARKVFDEMRQRD 144
Query: 25 AISWNTII 2
SWN ++
Sbjct: 145 VCSWNVMV 152