BLASTX nr result

ID: Ephedra29_contig00016184 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00016184
         (378 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006430875.1 hypothetical protein CICLE_v10011236mg [Citrus cl...    55   3e-06
XP_011012716.1 PREDICTED: pentatricopeptide repeat-containing pr...    54   7e-06
KDO58881.1 hypothetical protein CISIN_1g042546mg [Citrus sinensis]     54   7e-06
XP_006482336.1 PREDICTED: pentatricopeptide repeat-containing pr...    54   7e-06

>XP_006430875.1 hypothetical protein CICLE_v10011236mg [Citrus clementina]
           ESR44115.1 hypothetical protein CICLE_v10011236mg
           [Citrus clementina]
          Length = 671

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 38/101 (37%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
 Frame = +1

Query: 1   KEACKMFDLMKDHGFLTRIQLICDAIVKCGTADDAYDFIKKVNKDAIFGRASSI--MVKA 174
           K+A  +  LMKDHGF   +      + K GT+DDA  F+K +     F   S +  + +A
Sbjct: 567 KDALSLLCLMKDHGFPPFVDPFIKYVSKSGTSDDAIAFLKGMTSKR-FPSMSVVLCLFEA 625

Query: 175 FCNAERLSEAREFVSKVPTDIAKRHFLLNII-RKASGDDSA 294
           F  A R SEA++ +SK P  I     +LN++  K SG DSA
Sbjct: 626 FFQARRHSEAQDLLSKCPRYIRNHADVLNLLYSKKSGGDSA 666


>XP_011012716.1 PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Populus euphratica] XP_011012717.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At3g02490, mitochondrial-like [Populus euphratica]
          Length = 659

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
 Frame = +1

Query: 1   KEACKMFDLMKDHGFLTRIQLICDAIVKCGTADDAYDFIKKVNKDAIFGRASSI-MVKAF 177
           K+A  +  LM+ HG    I    + I K GT DDA  F+  +        + ++ M KAF
Sbjct: 554 KDALNLLGLMQSHGIPPHIDPFFEFISKSGTGDDAIAFMNAMTTKKFPSISVALRMFKAF 613

Query: 178 CNAERLSEAREFVSKVPTDIAKRHFLLNII-RKASGDDSAKSEVS 309
             A+R  EA++F+SK P  I  R  +LN+   K   +D+A ++VS
Sbjct: 614 FKAKRHGEAQDFLSKCPIYIRNRADVLNLFCSKKFSNDTAATDVS 658


>KDO58881.1 hypothetical protein CISIN_1g042546mg [Citrus sinensis]
          Length = 671

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
 Frame = +1

Query: 1   KEACKMFDLMKDHGFLTRIQLICDAIVKCGTADDAYDFIKKVNKDAIFGRASSI--MVKA 174
           K+A  +  LMKDHGF   +      + K GT+DDA  F+K +     F   S +  +  A
Sbjct: 567 KDALSLLCLMKDHGFPPFVDPFIKYVSKSGTSDDAIAFLKGMTSKR-FPSMSVVLCLFAA 625

Query: 175 FCNAERLSEAREFVSKVPTDIAKRHFLLNII-RKASGDDSA 294
           F  A R SEA++ +SK P  +     +LN++  K SG DSA
Sbjct: 626 FFQARRHSEAQDLLSKCPRYVRNHADVLNLLYSKKSGGDSA 666


>XP_006482336.1 PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial [Citrus sinensis]
          Length = 671

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
 Frame = +1

Query: 1   KEACKMFDLMKDHGFLTRIQLICDAIVKCGTADDAYDFIKKVNKDAIFGRASSI--MVKA 174
           K+A  +  LMKDHGF   +      + K GT+DDA  F+K +     F   S +  +  A
Sbjct: 567 KDALSLLCLMKDHGFPPFVDPFIKYVSKSGTSDDAIAFLKGMTSKR-FPSMSVVLCLFAA 625

Query: 175 FCNAERLSEAREFVSKVPTDIAKRHFLLNII-RKASGDDSA 294
           F  A R SEA++ +SK P  +     +LN++  K SG DSA
Sbjct: 626 FFQARRHSEAQDLLSKCPRYVRNHADVLNLLYSKKSGGDSA 666


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