BLASTX nr result

ID: Ephedra29_contig00016098 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00016098
         (674 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010256794.1 PREDICTED: transcription initiation factor TFIID ...    63   5e-08
XP_010674213.1 PREDICTED: transcription initiation factor TFIID ...    57   9e-06
ONK67710.1 uncharacterized protein A4U43_C05F2920 [Asparagus off...    56   1e-05

>XP_010256794.1 PREDICTED: transcription initiation factor TFIID subunit 12b
           isoform X1 [Nelumbo nucifera]
          Length = 644

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 44/111 (39%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
 Frame = -1

Query: 509 QSLAMMGPMGPGSQNRIXXXXXXXXXXXXSRVNAAALRSPNSTQPASPQGSLSSPQKLQS 330
           Q++ MMG +G   Q R              ++N   +R     Q  S Q SLSSPQKLQ+
Sbjct: 254 QTIGMMGSLGLSGQLR----GNRPLSYVQQQINQGQMRQ----QQLSQQTSLSSPQKLQA 305

Query: 329 QNLQRGSSFSTMNTQISGLSQG--QSIMSSNSLQQPNQWSKMQQSNLPSMS 183
           QNLQR SS +++N Q+SGL+Q    S+M ++ LQQ  QW K  Q  +   S
Sbjct: 306 QNLQRTSSLASLNPQMSGLAQNAQPSMMQNSMLQQ--QWLKQMQPAISGQS 354


>XP_010674213.1 PREDICTED: transcription initiation factor TFIID subunit 12b
           isoform X1 [Beta vulgaris subsp. vulgaris] KMT13864.1
           hypothetical protein BVRB_4g077060 isoform B [Beta
           vulgaris subsp. vulgaris]
          Length = 723

 Score = 56.6 bits (135), Expect = 9e-06
 Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = -1

Query: 419 RVNAAALRSPNSTQPASPQGSLSSPQKLQSQNLQRGSSFSTMNTQISGLSQ-GQSIMSSN 243
           R+N+A LR        S Q  L SPQK QSQNL R  S +  N+Q+SGLSQ GQ  +  N
Sbjct: 349 RINSAQLRQ------LSQQNPLLSPQKNQSQNLSRTPSLAYTNSQLSGLSQNGQPAVMQN 402

Query: 242 SLQQPNQWSKMQQSNLPSMSSP 177
           SL Q  QW K     +P+MS+P
Sbjct: 403 SLPQ-QQWFK----QMPAMSAP 419


>ONK67710.1 uncharacterized protein A4U43_C05F2920 [Asparagus officinalis]
          Length = 427

 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 36/70 (51%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
 Frame = -1

Query: 380 QPASPQGSLSSPQKLQSQNLQRGSSFSTMNTQISGLSQ-GQSIMSSNSL-QQPNQWSKMQ 207
           Q  S Q  LSSPQKL  Q L RGSS ++MN Q SGL+Q GQ     N+L QQP  W K  
Sbjct: 77  QQISMQNPLSSPQKLSGQGLPRGSSLASMNAQFSGLTQNGQPTSVQNALAQQP--WLKQM 134

Query: 206 QSNLPSMSSP 177
           Q  + S  SP
Sbjct: 135 QQTVSSPVSP 144


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