BLASTX nr result
ID: Ephedra29_contig00015914
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00015914
(1041 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABK22906.1 unknown [Picea sitchensis] 289 3e-94
XP_006858189.1 PREDICTED: chloroplastic group IIB intron splicin... 253 4e-80
XP_011097174.1 PREDICTED: chloroplastic group IIB intron splicin... 246 4e-77
XP_008812368.1 PREDICTED: chloroplastic group IIB intron splicin... 244 1e-76
XP_007033236.2 PREDICTED: chloroplastic group IIB intron splicin... 244 2e-76
OAY57091.1 hypothetical protein MANES_02G069700 [Manihot esculenta] 243 3e-76
XP_004145630.1 PREDICTED: chloroplastic group IIB intron splicin... 242 1e-75
XP_020088377.1 chloroplastic group IIB intron splicing facilitat... 242 1e-75
EOY04161.1 Peptidyl-tRNA hydrolase family protein isoform 1 [The... 242 1e-75
XP_012840996.1 PREDICTED: chloroplastic group IIB intron splicin... 242 1e-75
JAT55743.1 Chloroplastic group IIB intron splicing facilitator C... 242 1e-75
XP_012487842.1 PREDICTED: chloroplastic group IIB intron splicin... 242 1e-75
XP_012487847.1 PREDICTED: chloroplastic group IIB intron splicin... 241 3e-75
CDP02767.1 unnamed protein product [Coffea canephora] 241 3e-75
XP_018811745.1 PREDICTED: chloroplastic group IIB intron splicin... 239 1e-74
XP_015946186.1 PREDICTED: chloroplastic group IIB intron splicin... 239 1e-74
XP_009401351.1 PREDICTED: chloroplastic group IIB intron splicin... 240 1e-74
XP_010916423.1 PREDICTED: chloroplastic group IIB intron splicin... 239 1e-74
XP_009345686.1 PREDICTED: chloroplastic group IIB intron splicin... 239 1e-74
XP_017622189.1 PREDICTED: chloroplastic group IIB intron splicin... 239 2e-74
>ABK22906.1 unknown [Picea sitchensis]
Length = 246
Score = 289 bits (740), Expect = 3e-94
Identities = 139/246 (56%), Positives = 190/246 (77%)
Frame = -3
Query: 910 MLLRGSHFPVICIPRHGPAAVRLRLKSATQISCFCSSQDNASHSESSKLKPWLLVGLGNP 731
MLL ++FPV C+P A VR ++ S+ Q+ CS + S S ++K PWLL+GLGNP
Sbjct: 1 MLLHATYFPVPCMPPRTLAIVRYQMMSSPQVRYACSLHVSGSSSLNNKPTPWLLIGLGNP 60
Query: 730 GKKYEGTRHNVGFEMIDHIARAEGISLNAIQSKALIGKGYIGDTPILLAKPQTYMMLSGE 551
GKKYEGTRHNVGFEMID IA+AEGISLNAIQSK+LIGKGYI +TP+LLAKPQTY+ L+GE
Sbjct: 61 GKKYEGTRHNVGFEMIDSIAKAEGISLNAIQSKSLIGKGYICNTPVLLAKPQTYINLTGE 120
Query: 550 SVGPLRLYYQIPFYNTLLIFDTVDLPCGSVSLQPKGGHRGHKGVSHVIEKFEGRKSFPRL 371
SVG L +YY+IPF + LL+FD ++LP G + +Q KGGH H GV VI +G ++FPRL
Sbjct: 121 SVGSLAVYYRIPFQHILLMFDMMELPSGILRIQAKGGHGLHNGVKSVINHLKGNRNFPRL 180
Query: 370 YIGIGQRPETMDNRAYVLQRFTSSDQEKVNSSFEHGLEGIRMLLAEGFSRKLELFNRRQR 191
IGIG P +MD++AYVLQ+F++ ++EK+N S + G++ R+L++EGFS+ ++ FN+RQ+
Sbjct: 181 CIGIGNPPGSMDSKAYVLQQFSTMEREKMNISLQEGVDATRLLISEGFSQSIDGFNKRQK 240
Query: 190 YQHMRV 173
Y++ +V
Sbjct: 241 YKYHKV 246
>XP_006858189.1 PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic isoform X1 [Amborella trichopoda]
ERN19656.1 hypothetical protein AMTR_s00062p00164830
[Amborella trichopoda]
Length = 240
Score = 253 bits (646), Expect = 4e-80
Identities = 129/248 (52%), Positives = 172/248 (69%), Gaps = 2/248 (0%)
Frame = -3
Query: 910 MLLRGSHFPVICIPRHGPAAVRLRLKSATQISCFCSSQDNASHSESSKLK--PWLLVGLG 737
M+ P CI H + RL+S T+IS + +H+E KL+ PWL VGLG
Sbjct: 1 MMAHAISIPGACISYH--KFTQRRLRSNTRISV------SLTHAEEVKLEYTPWLFVGLG 52
Query: 736 NPGKKYEGTRHNVGFEMIDHIARAEGISLNAIQSKALIGKGYIGDTPILLAKPQTYMMLS 557
NPG KY GTRHNVGFEMID IA+ EGISLN IQSKALIG G IG+ P+LLAKPQTYM S
Sbjct: 53 NPGNKYHGTRHNVGFEMIDCIAQQEGISLNTIQSKALIGIGSIGEVPVLLAKPQTYMNFS 112
Query: 556 GESVGPLRLYYQIPFYNTLLIFDTVDLPCGSVSLQPKGGHRGHKGVSHVIEKFEGRKSFP 377
GESVGPL +YYQ+P + LLI+D + LP G + LQ KGGH H G+ V+++ + + FP
Sbjct: 113 GESVGPLAVYYQVPLRHILLIYDEMSLPNGVLRLQAKGGHGYHNGMKSVMDQLDNSREFP 172
Query: 376 RLYIGIGQRPETMDNRAYVLQRFTSSDQEKVNSSFEHGLEGIRMLLAEGFSRKLELFNRR 197
RL IGIG P TMD RAY+LQ+F++ ++E++N++ + G+EG+R L+ +GF + FN R
Sbjct: 173 RLSIGIGNHPGTMDMRAYLLQKFSAEEREQINAALKQGVEGVRSLVFKGFDDSINRFNLR 232
Query: 196 QRYQHMRV 173
Q+Y++ +V
Sbjct: 233 QKYKYHKV 240
>XP_011097174.1 PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic [Sesamum indicum]
Length = 249
Score = 246 bits (627), Expect = 4e-77
Identities = 120/228 (52%), Positives = 164/228 (71%)
Frame = -3
Query: 856 AAVRLRLKSATQISCFCSSQDNASHSESSKLKPWLLVGLGNPGKKYEGTRHNVGFEMIDH 677
A+ RLR+ +A+ S++ N E + PWL+VGLGNPG KY GTRHNVGFEMID
Sbjct: 31 ASTRLRVSAAS------SAEANVVKIEYT---PWLIVGLGNPGNKYHGTRHNVGFEMIDR 81
Query: 676 IARAEGISLNAIQSKALIGKGYIGDTPILLAKPQTYMMLSGESVGPLRLYYQIPFYNTLL 497
I++AEGI +N IQSKAL+G G IG+ P+LLAKPQTYM SGESVGPL YYQ+P + LL
Sbjct: 82 ISQAEGILMNTIQSKALVGIGSIGEVPVLLAKPQTYMNFSGESVGPLAAYYQVPLRHILL 141
Query: 496 IFDTVDLPCGSVSLQPKGGHRGHKGVSHVIEKFEGRKSFPRLYIGIGQRPETMDNRAYVL 317
++D + LP G + +QPKGGH H GV V+E +GR+ FPR IG+G P TMD +AY+L
Sbjct: 142 VYDEMSLPNGVLRIQPKGGHGHHNGVKSVMEHLDGRREFPRFCIGVGNPPGTMDMKAYLL 201
Query: 316 QRFTSSDQEKVNSSFEHGLEGIRMLLAEGFSRKLELFNRRQRYQHMRV 173
Q+F++ ++E+V+++ E G+E R L+ EGFS ++ FN Q+Y++ +V
Sbjct: 202 QKFSALEREQVDAALEQGIEAARTLVLEGFSSRINRFNLGQKYKYHKV 249
>XP_008812368.1 PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic-like [Phoenix dactylifera]
Length = 254
Score = 244 bits (624), Expect = 1e-76
Identities = 122/238 (51%), Positives = 159/238 (66%)
Frame = -3
Query: 886 PVICIPRHGPAAVRLRLKSATQISCFCSSQDNASHSESSKLKPWLLVGLGNPGKKYEGTR 707
P IP A RL L A C +S + S + PWL+ GLGNPG KY GTR
Sbjct: 17 PFTSIPNPNSARGRLLLLPAKPSRCAVASLPDPSEGAKVEYTPWLIAGLGNPGNKYHGTR 76
Query: 706 HNVGFEMIDHIARAEGISLNAIQSKALIGKGYIGDTPILLAKPQTYMMLSGESVGPLRLY 527
HNVGFEMID I+R GISLN IQSKALIG G IG+ PILLAKPQ YM +GESVG L Y
Sbjct: 77 HNVGFEMIDRISRDVGISLNTIQSKALIGIGAIGEVPILLAKPQAYMNYTGESVGALAAY 136
Query: 526 YQIPFYNTLLIFDTVDLPCGSVSLQPKGGHRGHKGVSHVIEKFEGRKSFPRLYIGIGQRP 347
YQ+P + LLI+D + LP G + LQPKGGH H GV +E +G ++FPRL IGIG P
Sbjct: 137 YQVPLRHILLIYDDMSLPNGVMRLQPKGGHGHHNGVKSAVEHLDGCRNFPRLCIGIGNPP 196
Query: 346 ETMDNRAYVLQRFTSSDQEKVNSSFEHGLEGIRMLLAEGFSRKLELFNRRQRYQHMRV 173
MD RA++LQ+F++ ++E+V+++ + G+E +R L+ +GFS ++ FN Q+Y+H +V
Sbjct: 197 GKMDMRAFLLQKFSAEEREQVDAALDQGVEAVRTLVIKGFSSSIDRFNLVQKYKHHKV 254
>XP_007033236.2 PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic [Theobroma cacao]
Length = 244
Score = 244 bits (622), Expect = 2e-76
Identities = 122/245 (49%), Positives = 162/245 (66%)
Frame = -3
Query: 907 LLRGSHFPVICIPRHGPAAVRLRLKSATQISCFCSSQDNASHSESSKLKPWLLVGLGNPG 728
+L P CIP R + +T++ S DN + + PWL+VGLGNPG
Sbjct: 1 MLHAISVPNTCIPYPRSRCFSQRNRGSTRLCVRASLPDNNDRFKV-EYTPWLIVGLGNPG 59
Query: 727 KKYEGTRHNVGFEMIDHIARAEGISLNAIQSKALIGKGYIGDTPILLAKPQTYMMLSGES 548
KY GTRHNVGFEMID I++ EGI+LN IQSKALIG G IG+ PILLAKPQ YM GES
Sbjct: 60 NKYHGTRHNVGFEMIDQISQVEGIALNTIQSKALIGLGAIGEVPILLAKPQAYMNFCGES 119
Query: 547 VGPLRLYYQIPFYNTLLIFDTVDLPCGSVSLQPKGGHRGHKGVSHVIEKFEGRKSFPRLY 368
VGPL YYQ+P + LLI+D + LP G + LQPKGGH H GV V+ +G + FPRL
Sbjct: 120 VGPLAAYYQVPLRHILLIYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGCREFPRLC 179
Query: 367 IGIGQRPETMDNRAYVLQRFTSSDQEKVNSSFEHGLEGIRMLLAEGFSRKLELFNRRQRY 188
IGIG P +MD +AY+LQ+F+S ++ ++N++ E G+E +R ++ GFS K+ FN Q+Y
Sbjct: 180 IGIGNPPGSMDMKAYLLQKFSSVERNQINAALEQGVEAVRTIVLNGFSHKITRFNLGQKY 239
Query: 187 QHMRV 173
++ +V
Sbjct: 240 KYHKV 244
>OAY57091.1 hypothetical protein MANES_02G069700 [Manihot esculenta]
Length = 244
Score = 243 bits (621), Expect = 3e-76
Identities = 120/219 (54%), Positives = 158/219 (72%)
Frame = -3
Query: 829 ATQISCFCSSQDNASHSESSKLKPWLLVGLGNPGKKYEGTRHNVGFEMIDHIARAEGISL 650
+T++S S DN S+ + PWL+VGLGNPG KY GTRHNVGFEMID IARAEG+ +
Sbjct: 27 STRLSVRASLPDN-SNGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDQIARAEGVVM 85
Query: 649 NAIQSKALIGKGYIGDTPILLAKPQTYMMLSGESVGPLRLYYQIPFYNTLLIFDTVDLPC 470
N IQSKALIG G I D PILLAKPQ YM SGESVGPL +YQ+P + +LI+D + LP
Sbjct: 86 NTIQSKALIGIGCIKDVPILLAKPQAYMNFSGESVGPLAAHYQVPLRHIILIYDEMSLPN 145
Query: 469 GSVSLQPKGGHRGHKGVSHVIEKFEGRKSFPRLYIGIGQRPETMDNRAYVLQRFTSSDQE 290
G V LQPKGGH H GV +VI+ +G + FPRL IGIG P TMD RA++LQ+F+S+++E
Sbjct: 146 GVVRLQPKGGHGHHNGVKNVIDHLDGCREFPRLCIGIGNPPGTMDMRAFLLQKFSSTERE 205
Query: 289 KVNSSFEHGLEGIRMLLAEGFSRKLELFNRRQRYQHMRV 173
+++++ E E +R L+ GF+R + FN Q+Y++ +V
Sbjct: 206 QIDAALEQANEAVRTLVLNGFNRSITRFNLGQKYKYNKV 244
>XP_004145630.1 PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic [Cucumis sativus] KGN57706.1
hypothetical protein Csa_3G257600 [Cucumis sativus]
Length = 249
Score = 242 bits (618), Expect = 1e-75
Identities = 117/219 (53%), Positives = 159/219 (72%)
Frame = -3
Query: 829 ATQISCFCSSQDNASHSESSKLKPWLLVGLGNPGKKYEGTRHNVGFEMIDHIARAEGISL 650
+T++S SS D+ S+ + PWL+VGLGNPG KY GTRHNVGFEMID IA+A+GI +
Sbjct: 31 STRLSVRASSPDSDSNGLKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDSIAQAQGILM 90
Query: 649 NAIQSKALIGKGYIGDTPILLAKPQTYMMLSGESVGPLRLYYQIPFYNTLLIFDTVDLPC 470
N IQSKALIG G IG+ PILLAKPQTYM GESVGPL +YQIP + LL +D ++LP
Sbjct: 91 NTIQSKALIGIGSIGEVPILLAKPQTYMNFCGESVGPLAAHYQIPLRHVLLTYDEMNLPN 150
Query: 469 GSVSLQPKGGHRGHKGVSHVIEKFEGRKSFPRLYIGIGQRPETMDNRAYVLQRFTSSDQE 290
G + LQPK GH H GV V+ +GR+ FPRL IGIG P TMD +A++LQ+F+S +++
Sbjct: 151 GVLRLQPKAGHGHHNGVKSVMGHLDGRREFPRLCIGIGNPPGTMDMKAFLLQKFSSVERK 210
Query: 289 KVNSSFEHGLEGIRMLLAEGFSRKLELFNRRQRYQHMRV 173
+++++ E G+E +R L GFS+++ FN Q+Y++ +V
Sbjct: 211 QIDAALEQGVEAVRTLALNGFSQRVNRFNLSQKYKYHKV 249
>XP_020088377.1 chloroplastic group IIB intron splicing facilitator CRS2,
chloroplastic [Ananas comosus]
Length = 254
Score = 242 bits (618), Expect = 1e-75
Identities = 114/211 (54%), Positives = 153/211 (72%)
Frame = -3
Query: 805 SSQDNASHSESSKLKPWLLVGLGNPGKKYEGTRHNVGFEMIDHIARAEGISLNAIQSKAL 626
+S + + ++ PWL+ GLGNPG KY GTRHNVGFEMID I+ EGI +N IQSKAL
Sbjct: 44 ASIPDPAEGRKAEYTPWLIAGLGNPGSKYHGTRHNVGFEMIDRISGEEGIVMNTIQSKAL 103
Query: 625 IGKGYIGDTPILLAKPQTYMMLSGESVGPLRLYYQIPFYNTLLIFDTVDLPCGSVSLQPK 446
IG G IG+ PI+L KPQ+YM SGESVGPL YYQ+P + LLI+D + LP G + LQPK
Sbjct: 104 IGIGSIGEVPIMLVKPQSYMNYSGESVGPLAAYYQVPLRHILLIYDEMSLPNGVMRLQPK 163
Query: 445 GGHRGHKGVSHVIEKFEGRKSFPRLYIGIGQRPETMDNRAYVLQRFTSSDQEKVNSSFEH 266
GGH H GV V+E +G ++FPRL IGIG P TMD RA++LQ+F+S ++E++NS+ +
Sbjct: 164 GGHGHHNGVKSVMEHLDGSRNFPRLCIGIGNPPGTMDMRAFLLQKFSSEEREQINSALDQ 223
Query: 265 GLEGIRMLLAEGFSRKLELFNRRQRYQHMRV 173
GLE +R L+ +GF+ ++ FN Q+Y+H +V
Sbjct: 224 GLEAVRTLVLKGFNASIDRFNLVQKYKHHKV 254
>EOY04161.1 Peptidyl-tRNA hydrolase family protein isoform 1 [Theobroma cacao]
EOY04162.1 Peptidyl-tRNA hydrolase family protein
isoform 1 [Theobroma cacao]
Length = 244
Score = 242 bits (617), Expect = 1e-75
Identities = 121/245 (49%), Positives = 162/245 (66%)
Frame = -3
Query: 907 LLRGSHFPVICIPRHGPAAVRLRLKSATQISCFCSSQDNASHSESSKLKPWLLVGLGNPG 728
+L P CIP R + +T++ S DN + + PWL+VGLGNPG
Sbjct: 1 MLHAISVPNTCIPYPRSRCFSQRNRGSTRLCVRASLPDN-NDGFKVEYTPWLIVGLGNPG 59
Query: 727 KKYEGTRHNVGFEMIDHIARAEGISLNAIQSKALIGKGYIGDTPILLAKPQTYMMLSGES 548
KY GTRHNVGFEMID I++ EGI+LN IQSKALIG G IG+ PILLAKPQ YM GES
Sbjct: 60 NKYHGTRHNVGFEMIDQISQVEGIALNTIQSKALIGLGAIGEVPILLAKPQAYMNFCGES 119
Query: 547 VGPLRLYYQIPFYNTLLIFDTVDLPCGSVSLQPKGGHRGHKGVSHVIEKFEGRKSFPRLY 368
VGPL YYQ+P + LLI+D + LP G + LQPKGGH H GV V+ +G + FPRL
Sbjct: 120 VGPLAAYYQVPLRHILLIYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGCREFPRLC 179
Query: 367 IGIGQRPETMDNRAYVLQRFTSSDQEKVNSSFEHGLEGIRMLLAEGFSRKLELFNRRQRY 188
IGIG P +MD +AY+LQ+F+S ++ +++++ E G+E +R ++ GFS K+ FN Q+Y
Sbjct: 180 IGIGNPPGSMDMKAYLLQKFSSVERNQIDAALEQGVEAVRTIVLNGFSHKITRFNLGQKY 239
Query: 187 QHMRV 173
++ +V
Sbjct: 240 KYHKV 244
>XP_012840996.1 PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like [Erythranthe guttata]
EYU34418.1 hypothetical protein MIMGU_mgv1a012538mg
[Erythranthe guttata]
Length = 247
Score = 242 bits (617), Expect = 1e-75
Identities = 115/226 (50%), Positives = 162/226 (71%)
Frame = -3
Query: 850 VRLRLKSATQISCFCSSQDNASHSESSKLKPWLLVGLGNPGKKYEGTRHNVGFEMIDHIA 671
++ RL S+T++ +S + ++ PWL+VGLGNPG KY GTRHNVGFEM+D ++
Sbjct: 24 IQRRLTSSTRLKVSATSAE--PKGVKTEYTPWLIVGLGNPGNKYHGTRHNVGFEMVDRLS 81
Query: 670 RAEGISLNAIQSKALIGKGYIGDTPILLAKPQTYMMLSGESVGPLRLYYQIPFYNTLLIF 491
+AEGI +N IQSKALIG G IG+ P+LLAKPQ+YM SGESVGPL YYQ+P + LL++
Sbjct: 82 QAEGIVMNTIQSKALIGIGSIGEVPVLLAKPQSYMNFSGESVGPLAAYYQVPLRHILLVY 141
Query: 490 DTVDLPCGSVSLQPKGGHRGHKGVSHVIEKFEGRKSFPRLYIGIGQRPETMDNRAYVLQR 311
D + LP G + +QPKGGH H GV V+E +GR+ FPR IGIG P TMD +AY+LQ+
Sbjct: 142 DEMSLPNGVLRVQPKGGHGHHNGVKSVMEHLDGRREFPRFCIGIGNPPGTMDMKAYLLQK 201
Query: 310 FTSSDQEKVNSSFEHGLEGIRMLLAEGFSRKLELFNRRQRYQHMRV 173
F+ S++++V+++ E G+E + L+ EGFS ++ FN Q+Y++ V
Sbjct: 202 FSPSERKQVDAALEQGVEAAQTLVLEGFSSRINRFNLGQKYKYHTV 247
>JAT55743.1 Chloroplastic group IIB intron splicing facilitator CRS2,
chloroplastic [Anthurium amnicola]
Length = 258
Score = 242 bits (618), Expect = 1e-75
Identities = 111/196 (56%), Positives = 151/196 (77%)
Frame = -3
Query: 760 PWLLVGLGNPGKKYEGTRHNVGFEMIDHIARAEGISLNAIQSKALIGKGYIGDTPILLAK 581
PWL+VGLGNPG KY GTRHNVGFEM+D IA+AEGI+LN IQSKALIG G IG+ PILLAK
Sbjct: 63 PWLIVGLGNPGNKYHGTRHNVGFEMVDGIAKAEGITLNTIQSKALIGIGSIGEVPILLAK 122
Query: 580 PQTYMMLSGESVGPLRLYYQIPFYNTLLIFDTVDLPCGSVSLQPKGGHRGHKGVSHVIEK 401
PQ YM SGESVGPL YYQ+P + LLI+D + LP G + LQPKGGH H G+ +V++
Sbjct: 123 PQAYMNFSGESVGPLAAYYQVPLRHILLIYDEMSLPNGILRLQPKGGHGHHNGLKNVMDH 182
Query: 400 FEGRKSFPRLYIGIGQRPETMDNRAYVLQRFTSSDQEKVNSSFEHGLEGIRMLLAEGFSR 221
+GR+ FPRL IGIG +P TMD +A++LQ+F+ ++E+++++ E G++ +R L+++GF
Sbjct: 183 LDGRREFPRLSIGIGNQPGTMDMKAFLLQKFSQKEREQIDAALEQGVDAVRTLVSKGFIN 242
Query: 220 KLELFNRRQRYQHMRV 173
+ FN Q+Y++ +V
Sbjct: 243 SITRFNLGQKYKYHKV 258
>XP_012487842.1 PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like isoform X1 [Gossypium
raimondii] XP_016745961.1 PREDICTED: chloroplastic group
IIB intron splicing facilitator CRS2-B,
chloroplastic-like isoform X1 [Gossypium hirsutum]
XP_016745962.1 PREDICTED: chloroplastic group IIB intron
splicing facilitator CRS2-B, chloroplastic-like isoform
X1 [Gossypium hirsutum] XP_016745964.1 PREDICTED:
chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like isoform X1 [Gossypium
hirsutum] XP_016745965.1 PREDICTED: chloroplastic group
IIB intron splicing facilitator CRS2-B,
chloroplastic-like isoform X1 [Gossypium hirsutum]
XP_016745966.1 PREDICTED: chloroplastic group IIB intron
splicing facilitator CRS2-B, chloroplastic-like isoform
X1 [Gossypium hirsutum] KJB10455.1 hypothetical protein
B456_001G202300 [Gossypium raimondii]
Length = 262
Score = 242 bits (618), Expect = 1e-75
Identities = 122/247 (49%), Positives = 162/247 (65%)
Frame = -3
Query: 913 RMLLRGSHFPVICIPRHGPAAVRLRLKSATQISCFCSSQDNASHSESSKLKPWLLVGLGN 734
R +L P CI R + +T+ S DN + + PWL+VGLGN
Sbjct: 17 RSMLHAISVPNTCILCPRSRCFGQRNQGSTRFCLRASLPDNNGEFKV-EYTPWLVVGLGN 75
Query: 733 PGKKYEGTRHNVGFEMIDHIARAEGISLNAIQSKALIGKGYIGDTPILLAKPQTYMMLSG 554
PG KY GTRHNVGFEMID I+++EGI+LN IQSKAL+G G IG+ PILLAKPQ YM SG
Sbjct: 76 PGNKYHGTRHNVGFEMIDQISQSEGIALNTIQSKALVGIGAIGEVPILLAKPQAYMNFSG 135
Query: 553 ESVGPLRLYYQIPFYNTLLIFDTVDLPCGSVSLQPKGGHRGHKGVSHVIEKFEGRKSFPR 374
ESVGPL YYQ+P + LLI+D + LP G + LQPKGGH H GV V+ +G + FPR
Sbjct: 136 ESVGPLAAYYQVPLRHILLIYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGSREFPR 195
Query: 373 LYIGIGQRPETMDNRAYVLQRFTSSDQEKVNSSFEHGLEGIRMLLAEGFSRKLELFNRRQ 194
L IGIG P MD +AY+LQ+F+ +++ ++N + E G+E +R L+ GF++K+ FN Q
Sbjct: 196 LCIGIGNPPGAMDMKAYLLQKFSPAERNQINEALEQGVEAVRTLVLNGFNQKITRFNLGQ 255
Query: 193 RYQHMRV 173
+Y+H +V
Sbjct: 256 KYKHHKV 262
>XP_012487847.1 PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like isoform X2 [Gossypium
raimondii] XP_012487854.1 PREDICTED: chloroplastic group
IIB intron splicing facilitator CRS2-B,
chloroplastic-like isoform X2 [Gossypium raimondii]
XP_012487860.1 PREDICTED: chloroplastic group IIB intron
splicing facilitator CRS2-B, chloroplastic-like isoform
X2 [Gossypium raimondii] XP_012487863.1 PREDICTED:
chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like isoform X2 [Gossypium
raimondii] XP_016745967.1 PREDICTED: chloroplastic group
IIB intron splicing facilitator CRS2-B,
chloroplastic-like isoform X2 [Gossypium hirsutum]
XP_016745968.1 PREDICTED: chloroplastic group IIB intron
splicing facilitator CRS2-B, chloroplastic-like isoform
X2 [Gossypium hirsutum] XP_016745969.1 PREDICTED:
chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like isoform X2 [Gossypium
hirsutum] XP_016745970.1 PREDICTED: chloroplastic group
IIB intron splicing facilitator CRS2-B,
chloroplastic-like isoform X2 [Gossypium hirsutum]
KJB10456.1 hypothetical protein B456_001G202300
[Gossypium raimondii] KJB10458.1 hypothetical protein
B456_001G202300 [Gossypium raimondii]
Length = 244
Score = 241 bits (614), Expect = 3e-75
Identities = 121/245 (49%), Positives = 161/245 (65%)
Frame = -3
Query: 907 LLRGSHFPVICIPRHGPAAVRLRLKSATQISCFCSSQDNASHSESSKLKPWLLVGLGNPG 728
+L P CI R + +T+ S DN + + PWL+VGLGNPG
Sbjct: 1 MLHAISVPNTCILCPRSRCFGQRNQGSTRFCLRASLPDNNGEFKV-EYTPWLVVGLGNPG 59
Query: 727 KKYEGTRHNVGFEMIDHIARAEGISLNAIQSKALIGKGYIGDTPILLAKPQTYMMLSGES 548
KY GTRHNVGFEMID I+++EGI+LN IQSKAL+G G IG+ PILLAKPQ YM SGES
Sbjct: 60 NKYHGTRHNVGFEMIDQISQSEGIALNTIQSKALVGIGAIGEVPILLAKPQAYMNFSGES 119
Query: 547 VGPLRLYYQIPFYNTLLIFDTVDLPCGSVSLQPKGGHRGHKGVSHVIEKFEGRKSFPRLY 368
VGPL YYQ+P + LLI+D + LP G + LQPKGGH H GV V+ +G + FPRL
Sbjct: 120 VGPLAAYYQVPLRHILLIYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGSREFPRLC 179
Query: 367 IGIGQRPETMDNRAYVLQRFTSSDQEKVNSSFEHGLEGIRMLLAEGFSRKLELFNRRQRY 188
IGIG P MD +AY+LQ+F+ +++ ++N + E G+E +R L+ GF++K+ FN Q+Y
Sbjct: 180 IGIGNPPGAMDMKAYLLQKFSPAERNQINEALEQGVEAVRTLVLNGFNQKITRFNLGQKY 239
Query: 187 QHMRV 173
+H +V
Sbjct: 240 KHHKV 244
>CDP02767.1 unnamed protein product [Coffea canephora]
Length = 245
Score = 241 bits (614), Expect = 3e-75
Identities = 111/205 (54%), Positives = 152/205 (74%)
Frame = -3
Query: 787 SHSESSKLKPWLLVGLGNPGKKYEGTRHNVGFEMIDHIARAEGISLNAIQSKALIGKGYI 608
SH + PWL+VGLGNPG KY GTRHNVGFEMID I++AEGI +N IQSKAL+G G I
Sbjct: 41 SHGVKVEYTPWLIVGLGNPGNKYHGTRHNVGFEMIDCISQAEGIVMNTIQSKALVGIGSI 100
Query: 607 GDTPILLAKPQTYMMLSGESVGPLRLYYQIPFYNTLLIFDTVDLPCGSVSLQPKGGHRGH 428
G+ P+LLAKPQ YM SGESVGPL YY++P + LL++D + LP G + LQPKGGH H
Sbjct: 101 GEVPVLLAKPQAYMNYSGESVGPLAAYYRVPLRHILLVYDEMSLPNGVLRLQPKGGHGHH 160
Query: 427 KGVSHVIEKFEGRKSFPRLYIGIGQRPETMDNRAYVLQRFTSSDQEKVNSSFEHGLEGIR 248
GV V+E +GR+ FPR IGIG P TMD +A++LQ+F++ ++E+++++ E G+E +R
Sbjct: 161 NGVKSVMEHLDGRREFPRFCIGIGNPPGTMDMKAFLLQKFSTVEREQIDAALEQGVEAVR 220
Query: 247 MLLAEGFSRKLELFNRRQRYQHMRV 173
L+ EGF+ ++ FN Q+Y++ +V
Sbjct: 221 ALIQEGFNSRITRFNLGQKYKYHKV 245
>XP_018811745.1 PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-A, chloroplastic isoform X2 [Juglans regia]
Length = 247
Score = 239 bits (611), Expect = 1e-74
Identities = 119/237 (50%), Positives = 163/237 (68%), Gaps = 1/237 (0%)
Frame = -3
Query: 880 ICIPRHGPAAVRLRLKSA-TQISCFCSSQDNASHSESSKLKPWLLVGLGNPGKKYEGTRH 704
I PR LR +S ++S S DN ++ + PWL+VGLGNPG KY GTRH
Sbjct: 12 ISYPRSASCPHFLRKRSVPARLSIRASLPDN-NNGAKMEYTPWLIVGLGNPGNKYHGTRH 70
Query: 703 NVGFEMIDHIARAEGISLNAIQSKALIGKGYIGDTPILLAKPQTYMMLSGESVGPLRLYY 524
NVGFEMID I+RAEG+S+N IQSK LIG G IG+ PILLAKPQ Y+ SGE+VGPL YY
Sbjct: 71 NVGFEMIDSISRAEGVSMNTIQSKTLIGIGSIGEVPILLAKPQAYVNYSGEAVGPLAAYY 130
Query: 523 QIPFYNTLLIFDTVDLPCGSVSLQPKGGHRGHKGVSHVIEKFEGRKSFPRLYIGIGQRPE 344
Q+P + LL++D + LP G + LQPKGGH H G+ V+E +G + FPRL IGIG P
Sbjct: 131 QVPLRHILLVYDEMSLPSGVLRLQPKGGHGHHNGMRSVMEHLDGCRQFPRLCIGIGNPPG 190
Query: 343 TMDNRAYVLQRFTSSDQEKVNSSFEHGLEGIRMLLAEGFSRKLELFNRRQRYQHMRV 173
TMD +A++LQ+F+S ++++++++ E G+E +R L+ GFS + FN Q+Y++ +V
Sbjct: 191 TMDLKAFLLQKFSSVERKQIDAALEQGVEAVRSLVLHGFSENINRFNLGQKYKYHKV 247
>XP_015946186.1 PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like [Arachis duranensis]
Length = 249
Score = 239 bits (611), Expect = 1e-74
Identities = 124/250 (49%), Positives = 166/250 (66%), Gaps = 4/250 (1%)
Frame = -3
Query: 910 MLLRGSHFPVICI--PR--HGPAAVRLRLKSATQISCFCSSQDNASHSESSKLKPWLLVG 743
ML S P C+ PR H P R A C CS + + + + PWL+VG
Sbjct: 1 MLHAASPAPGFCLSCPRNLHRPRDSREPSVRARSPVC-CSVPETKNGATKVEYTPWLVVG 59
Query: 742 LGNPGKKYEGTRHNVGFEMIDHIARAEGISLNAIQSKALIGKGYIGDTPILLAKPQTYMM 563
LGNPG KY GTRHNVGFE+ID I+RAEGI +N IQSKALIG G IGD PILLAKPQTYM
Sbjct: 60 LGNPGSKYHGTRHNVGFEVIDSISRAEGIRMNTIQSKALIGMGSIGDVPILLAKPQTYMN 119
Query: 562 LSGESVGPLRLYYQIPFYNTLLIFDTVDLPCGSVSLQPKGGHRGHKGVSHVIEKFEGRKS 383
SGESVGPL YYQ+P + LL++D + LP G + LQPKGGH H G+ +V+ +G +
Sbjct: 120 FSGESVGPLAAYYQVPLRHILLVYDEMSLPNGVLRLQPKGGHGYHNGLKNVMGHLDGSRE 179
Query: 382 FPRLYIGIGQRPETMDNRAYVLQRFTSSDQEKVNSSFEHGLEGIRMLLAEGFSRKLELFN 203
FPRL +GIG P MD +A++LQ+F+S +++++++S E G+E +R L+ GF+ + FN
Sbjct: 180 FPRLSLGIGNPPGNMDVKAFLLQKFSSVERKQIDTSLEQGVEAVRTLVLNGFNNHVYRFN 239
Query: 202 RRQRYQHMRV 173
Q+Y++ +V
Sbjct: 240 LGQKYKYHKV 249
>XP_009401351.1 PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic-like [Musa acuminata subsp.
malaccensis]
Length = 260
Score = 240 bits (612), Expect = 1e-74
Identities = 120/236 (50%), Positives = 161/236 (68%)
Frame = -3
Query: 880 ICIPRHGPAAVRLRLKSATQISCFCSSQDNASHSESSKLKPWLLVGLGNPGKKYEGTRHN 701
I IP + R L+ +++ S +S + S + PWL+ GLGNPG KY+GTRHN
Sbjct: 25 IQIPFNPTRRRRFLLRDSSKRSRALASLPDDSEGARPEYTPWLIAGLGNPGNKYQGTRHN 84
Query: 700 VGFEMIDHIARAEGISLNAIQSKALIGKGYIGDTPILLAKPQTYMMLSGESVGPLRLYYQ 521
VG+EMIDHI+RAE I+LN IQSKALIG G IG+ PILL KPQ+YM SGES+GPL YYQ
Sbjct: 85 VGYEMIDHISRAERITLNTIQSKALIGIGSIGEVPILLVKPQSYMNYSGESLGPLAAYYQ 144
Query: 520 IPFYNTLLIFDTVDLPCGSVSLQPKGGHRGHKGVSHVIEKFEGRKSFPRLYIGIGQRPET 341
+P + LLI+D + LP G + LQ KGGH H GV VI+ +G + FPRL IGIG P
Sbjct: 145 VPLRHILLIYDEMSLPNGVLRLQRKGGHGHHNGVKSVIQHLDGSRDFPRLCIGIGNPPGA 204
Query: 340 MDNRAYVLQRFTSSDQEKVNSSFEHGLEGIRMLLAEGFSRKLELFNRRQRYQHMRV 173
MD RA++LQ+F+ +Q ++ S+FE G+E +R L+ GFS ++ FN Q+Y++ +V
Sbjct: 205 MDMRAFLLQKFSKEEQVQMESAFEQGVEAVRTLVLRGFSGSIDRFNLVQKYKYHKV 260
>XP_010916423.1 PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2, chloroplastic [Elaeis guineensis]
Length = 254
Score = 239 bits (611), Expect = 1e-74
Identities = 120/238 (50%), Positives = 159/238 (66%)
Frame = -3
Query: 886 PVICIPRHGPAAVRLRLKSATQISCFCSSQDNASHSESSKLKPWLLVGLGNPGKKYEGTR 707
P+ IP A RL L A +S S + PWL+ GLGNPG KY GTR
Sbjct: 17 PLTSIPSPNSARRRLFLLPAKPSRRAVASLPEPSEGAKVEYTPWLIAGLGNPGNKYHGTR 76
Query: 706 HNVGFEMIDHIARAEGISLNAIQSKALIGKGYIGDTPILLAKPQTYMMLSGESVGPLRLY 527
HNVGFEM+D I++ GISLN +QSKALIG G IG+ PILLAKPQ YM SGESVG L Y
Sbjct: 77 HNVGFEMVDRISQDVGISLNTLQSKALIGIGAIGEVPILLAKPQAYMNYSGESVGTLAAY 136
Query: 526 YQIPFYNTLLIFDTVDLPCGSVSLQPKGGHRGHKGVSHVIEKFEGRKSFPRLYIGIGQRP 347
YQ+P + LLI+D + LP G + LQPKGGH H GV V+E +G ++FPRL IGIG P
Sbjct: 137 YQVPLRHILLIYDEMSLPNGVMRLQPKGGHGHHNGVKSVMEHLDGCRTFPRLCIGIGNPP 196
Query: 346 ETMDNRAYVLQRFTSSDQEKVNSSFEHGLEGIRMLLAEGFSRKLELFNRRQRYQHMRV 173
MD RA++LQ+F++ ++E+VN++ + G+E +R L+ +GF+ ++ FN Q+Y+H +V
Sbjct: 197 GKMDMRAFLLQKFSAEEREQVNAALDQGVEAVRTLVLKGFNSSIDRFNLVQKYKHHKV 254
>XP_009345686.1 PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like [Pyrus x bretschneideri]
Length = 247
Score = 239 bits (610), Expect = 1e-74
Identities = 119/240 (49%), Positives = 162/240 (67%), Gaps = 2/240 (0%)
Frame = -3
Query: 886 PVICI--PRHGPAAVRLRLKSATQISCFCSSQDNASHSESSKLKPWLLVGLGNPGKKYEG 713
P CI PR + LR S + +S + ++ + PWL+VGLGNPG KY G
Sbjct: 8 PNYCISYPRRPCSPPSLRKYSVSTSFRVKASLPDNTNGAKVEYTPWLIVGLGNPGNKYHG 67
Query: 712 TRHNVGFEMIDHIARAEGISLNAIQSKALIGKGYIGDTPILLAKPQTYMMLSGESVGPLR 533
TRHN+GFEMID IA+AEGI++N IQSKALIG G IG+ PILL KPQ YM SGESVGPL
Sbjct: 68 TRHNIGFEMIDGIAKAEGIAMNTIQSKALIGIGSIGEVPILLVKPQAYMNYSGESVGPLA 127
Query: 532 LYYQIPFYNTLLIFDTVDLPCGSVSLQPKGGHRGHKGVSHVIEKFEGRKSFPRLYIGIGQ 353
YYQ+P + LL++D + LP G + +QPKGGH H GV V+ +G + FPRL IGIG
Sbjct: 128 AYYQVPLRHILLVYDEMSLPNGVLRIQPKGGHGYHNGVKSVMGHLDGCREFPRLCIGIGN 187
Query: 352 RPETMDNRAYVLQRFTSSDQEKVNSSFEHGLEGIRMLLAEGFSRKLELFNRRQRYQHMRV 173
P TMD +AY+LQRF++ ++ ++N++ + G+E +R L+ GF + + FN RQ+Y++ +V
Sbjct: 188 PPGTMDMKAYLLQRFSTVERHQINAALDQGVEAVRTLVLNGFDQSITSFNLRQKYKYHKV 247
>XP_017622189.1 PREDICTED: chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like [Gossypium arboreum]
XP_017622196.1 PREDICTED: chloroplastic group IIB intron
splicing facilitator CRS2-B, chloroplastic-like
[Gossypium arboreum] XP_017622203.1 PREDICTED:
chloroplastic group IIB intron splicing facilitator
CRS2-B, chloroplastic-like [Gossypium arboreum]
KHG12449.1 Chloroplastic group IIB intron splicing
facilitator CRS2-A, chloroplastic -like protein
[Gossypium arboreum]
Length = 244
Score = 239 bits (609), Expect = 2e-74
Identities = 120/245 (48%), Positives = 161/245 (65%)
Frame = -3
Query: 907 LLRGSHFPVICIPRHGPAAVRLRLKSATQISCFCSSQDNASHSESSKLKPWLLVGLGNPG 728
+L P CI R + +T+ S DN + + PWL+VGLGNPG
Sbjct: 1 MLHAISVPNTCILCPRSRCFGQRNRGSTRFCLRASLPDN-NGGFKVEYTPWLVVGLGNPG 59
Query: 727 KKYEGTRHNVGFEMIDHIARAEGISLNAIQSKALIGKGYIGDTPILLAKPQTYMMLSGES 548
KY GTRHNVGFEMID I+++EGI+LN IQSKAL+G G IG+ PILLAKPQ YM SGES
Sbjct: 60 NKYHGTRHNVGFEMIDQISQSEGIALNTIQSKALVGIGAIGEVPILLAKPQAYMNFSGES 119
Query: 547 VGPLRLYYQIPFYNTLLIFDTVDLPCGSVSLQPKGGHRGHKGVSHVIEKFEGRKSFPRLY 368
VGPL YYQ+P + LLI+D + LP G + LQPKGGH H GV V+ +G + FPRL
Sbjct: 120 VGPLAAYYQVPLRHILLIYDEMSLPNGVLRLQPKGGHGHHNGVKSVMGHLDGSREFPRLC 179
Query: 367 IGIGQRPETMDNRAYVLQRFTSSDQEKVNSSFEHGLEGIRMLLAEGFSRKLELFNRRQRY 188
IGIG P MD +AY+LQ+F+ +++ +++ + E G+E +R L+ GF++K+ FN Q+Y
Sbjct: 180 IGIGNPPGAMDMKAYLLQKFSPAERNQIDEALEQGVEAVRTLVLNGFNQKITRFNLGQKY 239
Query: 187 QHMRV 173
+H +V
Sbjct: 240 KHHKV 244