BLASTX nr result
ID: Ephedra29_contig00015770
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00015770
(702 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_001756574.1 transcription elongation factor SPT6 [Physcomitre... 97 8e-44
ERN14582.1 hypothetical protein AMTR_s00038p00136890 [Amborella ... 90 4e-34
XP_011626499.1 PREDICTED: transcription elongation factor SPT6 [... 90 4e-34
XP_009380257.1 PREDICTED: transcription elongation factor SPT6-l... 88 7e-29
XP_018677976.1 PREDICTED: transcription elongation factor SPT6-l... 88 7e-29
XP_020162895.1 transcription elongation factor SPT6-like [Aegilo... 84 9e-28
XP_018843666.1 PREDICTED: transcription elongation factor SPT6 h... 86 1e-27
XP_018843668.1 PREDICTED: transcription elongation factor SPT6 h... 86 1e-27
XP_018843667.1 PREDICTED: transcription elongation factor SPT6 h... 86 1e-27
XP_011041349.1 PREDICTED: transcription elongation factor SPT6-l... 82 3e-27
XP_011041350.1 PREDICTED: transcription elongation factor SPT6-l... 82 3e-27
XP_011041352.1 PREDICTED: transcription elongation factor SPT6-l... 82 3e-27
XP_002307949.2 hypothetical protein POPTR_0006s03040g [Populus t... 83 3e-27
EMS61141.1 Transcription elongation factor SPT6 [Triticum urartu] 82 3e-27
XP_011040704.1 PREDICTED: transcription elongation factor SPT6-l... 83 7e-27
XP_011040705.1 PREDICTED: transcription elongation factor SPT6-l... 83 7e-27
XP_002322597.2 hypothetical protein POPTR_0016s02900g [Populus t... 82 9e-27
XP_017603733.1 PREDICTED: transcription elongation factor SPT6-l... 83 1e-26
XP_016676812.1 PREDICTED: transcription elongation factor SPT6-l... 83 1e-26
KHG09405.1 Transcription elongation factor SPT6 [Gossypium arbor... 83 1e-26
>XP_001756574.1 transcription elongation factor SPT6 [Physcomitrella patens]
EDQ78528.1 transcription elongation factor SPT6, partial
[Physcomitrella patens]
Length = 1235
Score = 97.1 bits (240), Expect(3) = 8e-44
Identities = 45/95 (47%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
Frame = +3
Query: 168 F*VPFIAMYRKEMCVNLLQNKEEFLTDAETPTLKMYKALWAVQKWDEKWLLLQRQKSALR 347
F +PFIAMYR+E C +LL+ + D E P ++ Y ALWAVQ+WD+KWLLLQR+K+AL+
Sbjct: 147 FEIPFIAMYRREECFDLLKEASDDYEDEERPLVRTYAALWAVQQWDKKWLLLQRRKTALQ 206
Query: 348 TAYENR-AYDVENEKIRSMVLDSILEALSEAKSER 449
AYE R D+ ++ + ++D IL AL++A++++
Sbjct: 207 AAYEKRIPSDIRDDPEKDELVDKILRALADAQADQ 241
Score = 75.1 bits (183), Expect(3) = 8e-44
Identities = 37/70 (52%), Positives = 45/70 (64%)
Frame = +1
Query: 454 DEVDISKGQHKRPM*KSRYSICHESGYAEVAKNFGLTAEQFAKNLQVMYKTNDVEDPTTS 633
DEV+I G KRP +S YSIC + G VAK FGL + F +NLQ YK +DVED S
Sbjct: 257 DEVEIVDGGFKRPKRRSLYSICRKGGLGVVAKEFGLAPDLFGENLQATYKRHDVEDKPIS 316
Query: 634 PEGVAAEFCT 663
PE +AA FC+
Sbjct: 317 PEELAARFCS 326
Score = 54.3 bits (129), Expect(3) = 8e-44
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = +1
Query: 22 AKWIYEHMFGSLAVSITAEFEHIAKLDKEQILSEIANVLRLFHDHKFE 165
A+WIY+ FG LAV + EF H+++ D++ I +IANVL L HD KFE
Sbjct: 102 AEWIYDRAFGHLAVPVRPEFRHLSR-DRDLISRQIANVLHLIHDDKFE 148
>ERN14582.1 hypothetical protein AMTR_s00038p00136890 [Amborella trichopoda]
Length = 1850
Score = 90.1 bits (222), Expect(3) = 4e-34
Identities = 46/103 (44%), Positives = 68/103 (66%), Gaps = 8/103 (7%)
Frame = +3
Query: 168 F*VPFIAMYRKEMCVNLLQNKEEFLTDAE-------TPTLKMYKALWAVQKWDEKWLLLQ 326
F +PFIAMYRKE+C++LL++ EE + E P L+ +K LWA+ +D KWLLLQ
Sbjct: 371 FDIPFIAMYRKELCLDLLRDPEEEVLSNEERDKSDKAPPLRWHKVLWAIHNFDRKWLLLQ 430
Query: 327 RQKSALRTAYENRA-YDVENEKIRSMVLDSILEALSEAKSERV 452
R+K AL +Y RA + N+ + +L+S++ AL +A+SERV
Sbjct: 431 RRKKALAVSYSKRAGEEARNDNSKKELLESLIAALEKAESERV 473
Score = 52.4 bits (124), Expect(3) = 4e-34
Identities = 31/83 (37%), Positives = 47/83 (56%)
Frame = +1
Query: 454 DEVDISKGQHKRPM*KSRYSICHESGYAEVAKNFGLTAEQFAKNLQVMYKTNDVEDPTTS 633
DE ++ +GQ KRP KS YS ++G AEVA FG++ E+ L+ + ++V+D +
Sbjct: 488 DEAELEEGQFKRPKRKSDYSRLRKAGLAEVASKFGVSPEKLGWLLK-NCRADEVDDARET 546
Query: 634 PEGVAAEFCTIYSGDQLTVLKAA 702
PE +A+ F I VLK A
Sbjct: 547 PEEMASTFVGIDFSSPQAVLKGA 569
Score = 51.2 bits (121), Expect(3) = 4e-34
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +1
Query: 4 EDTVPEAKWIYEHMFGSLAVSITAEFEHIAKLDKEQILSEIANVLRLFHDHKFE 165
E EA+WIY + GS F+HI +LDK+ I +EIANV+ + H KF+
Sbjct: 319 ESITKEAEWIYSQLVGSATGPSPVGFQHIMRLDKDHITAEIANVIGMLHVQKFD 372
>XP_011626499.1 PREDICTED: transcription elongation factor SPT6 [Amborella
trichopoda]
Length = 1719
Score = 90.1 bits (222), Expect(3) = 4e-34
Identities = 46/103 (44%), Positives = 68/103 (66%), Gaps = 8/103 (7%)
Frame = +3
Query: 168 F*VPFIAMYRKEMCVNLLQNKEEFLTDAE-------TPTLKMYKALWAVQKWDEKWLLLQ 326
F +PFIAMYRKE+C++LL++ EE + E P L+ +K LWA+ +D KWLLLQ
Sbjct: 371 FDIPFIAMYRKELCLDLLRDPEEEVLSNEERDKSDKAPPLRWHKVLWAIHNFDRKWLLLQ 430
Query: 327 RQKSALRTAYENRA-YDVENEKIRSMVLDSILEALSEAKSERV 452
R+K AL +Y RA + N+ + +L+S++ AL +A+SERV
Sbjct: 431 RRKKALAVSYSKRAGEEARNDNSKKELLESLIAALEKAESERV 473
Score = 52.4 bits (124), Expect(3) = 4e-34
Identities = 31/83 (37%), Positives = 47/83 (56%)
Frame = +1
Query: 454 DEVDISKGQHKRPM*KSRYSICHESGYAEVAKNFGLTAEQFAKNLQVMYKTNDVEDPTTS 633
DE ++ +GQ KRP KS YS ++G AEVA FG++ E+ L+ + ++V+D +
Sbjct: 488 DEAELEEGQFKRPKRKSDYSRLRKAGLAEVASKFGVSPEKLGWLLK-NCRADEVDDARET 546
Query: 634 PEGVAAEFCTIYSGDQLTVLKAA 702
PE +A+ F I VLK A
Sbjct: 547 PEEMASTFVGIDFSSPQAVLKGA 569
Score = 51.2 bits (121), Expect(3) = 4e-34
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +1
Query: 4 EDTVPEAKWIYEHMFGSLAVSITAEFEHIAKLDKEQILSEIANVLRLFHDHKFE 165
E EA+WIY + GS F+HI +LDK+ I +EIANV+ + H KF+
Sbjct: 319 ESITKEAEWIYSQLVGSATGPSPVGFQHIMRLDKDHITAEIANVIGMLHVQKFD 372
>XP_009380257.1 PREDICTED: transcription elongation factor SPT6-like isoform X1
[Musa acuminata subsp. malaccensis]
Length = 1713
Score = 88.2 bits (217), Expect(2) = 7e-29
Identities = 47/100 (47%), Positives = 67/100 (67%), Gaps = 8/100 (8%)
Frame = +3
Query: 174 VPFIAMYRKEMCVNLLQNKEEFLTD-AETPTLKMYKALWAVQKWDEKWLLLQRQKSALRT 350
+PFI+MYRKE+C++LL++ + D ETP +K +K LWAVQ D KWLLLQ++KSAL +
Sbjct: 363 IPFISMYRKELCLSLLKDPDAETPDNEETPKMKWHKVLWAVQTLDRKWLLLQKRKSALHS 422
Query: 351 AYENR----AYDVENE---KIRSMVLDSILEALSEAKSER 449
Y R A ++NE + + S++EAL +AKSER
Sbjct: 423 YYNKRFQEEARRIDNETRLALNQQLFKSVIEALRDAKSER 462
Score = 67.4 bits (163), Expect(2) = 7e-29
Identities = 39/83 (46%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 457 EVDISKGQHKRPM*KSRYSICHESGYAEVAKNFGLTAEQFAKNLQVMYKTNDVEDPTTSP 636
EVDI GQ KRP KS YSICH++G EVA FG ++EQF L + +++ED +P
Sbjct: 479 EVDIEDGQFKRPKRKSLYSICHKAGLWEVANKFGASSEQFGLLLSLDKILDELEDGKETP 538
Query: 637 EGVAAEF-CTIYSGDQLTVLKAA 702
E +AA F C ++ Q VLK A
Sbjct: 539 EEIAANFTCALFETPQ-DVLKGA 560
>XP_018677976.1 PREDICTED: transcription elongation factor SPT6-like isoform X2
[Musa acuminata subsp. malaccensis]
Length = 1712
Score = 88.2 bits (217), Expect(2) = 7e-29
Identities = 47/100 (47%), Positives = 67/100 (67%), Gaps = 8/100 (8%)
Frame = +3
Query: 174 VPFIAMYRKEMCVNLLQNKEEFLTD-AETPTLKMYKALWAVQKWDEKWLLLQRQKSALRT 350
+PFI+MYRKE+C++LL++ + D ETP +K +K LWAVQ D KWLLLQ++KSAL +
Sbjct: 362 IPFISMYRKELCLSLLKDPDAETPDNEETPKMKWHKVLWAVQTLDRKWLLLQKRKSALHS 421
Query: 351 AYENR----AYDVENE---KIRSMVLDSILEALSEAKSER 449
Y R A ++NE + + S++EAL +AKSER
Sbjct: 422 YYNKRFQEEARRIDNETRLALNQQLFKSVIEALRDAKSER 461
Score = 67.4 bits (163), Expect(2) = 7e-29
Identities = 39/83 (46%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 457 EVDISKGQHKRPM*KSRYSICHESGYAEVAKNFGLTAEQFAKNLQVMYKTNDVEDPTTSP 636
EVDI GQ KRP KS YSICH++G EVA FG ++EQF L + +++ED +P
Sbjct: 478 EVDIEDGQFKRPKRKSLYSICHKAGLWEVANKFGASSEQFGLLLSLDKILDELEDGKETP 537
Query: 637 EGVAAEF-CTIYSGDQLTVLKAA 702
E +AA F C ++ Q VLK A
Sbjct: 538 EEIAANFTCALFETPQ-DVLKGA 559
>XP_020162895.1 transcription elongation factor SPT6-like [Aegilops tauschii subsp.
tauschii]
Length = 1631
Score = 84.3 bits (207), Expect(3) = 9e-28
Identities = 47/103 (45%), Positives = 65/103 (63%), Gaps = 9/103 (8%)
Frame = +3
Query: 168 F*VPFIAMYRKEMCVNLLQNKE--EFLTDAETPTLKMYKALWAVQKWDEKWLLLQRQKSA 341
F VPFIAMYRKE C++L+++ + E + ET +K +K LWAVQ D KWLLLQ++K A
Sbjct: 363 FEVPFIAMYRKESCLSLVKDNDANEQANEEETRKMKWHKLLWAVQTLDRKWLLLQKRKVA 422
Query: 342 LRTAYE-------NRAYDVENEKIRSMVLDSILEALSEAKSER 449
L+ YE R DV + + + SI++AL EAKSE+
Sbjct: 423 LQIYYERRYDDEKRRIDDVTRQALNRQLYHSIIDALKEAKSEK 465
Score = 56.2 bits (134), Expect(3) = 9e-28
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Frame = +1
Query: 475 GQHKRPM*KSRYSICHESGYAEVAKNFGLTAEQFAKNLQV--MYKTNDVEDPTTSPEGVA 648
GQ KRP KS YSICH++G EVA FG +AEQ ++L + + + +++ SPE VA
Sbjct: 487 GQFKRPKRKSLYSICHKAGLWEVANQFGRSAEQLGQHLTLTRIPEAGELDSGKDSPEDVA 546
Query: 649 AEF-CTIYSGDQLTVLKAA 702
A F C ++ Q VL+ A
Sbjct: 547 ANFTCAMFETSQ-DVLRGA 564
Score = 31.6 bits (70), Expect(3) = 9e-28
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +1
Query: 19 EAKWIYEHMFGSLAVSITAEFEHIAKLDKEQILSEIANVLRLFHDHKFE 165
E+ WI+ + G +S+ + ++++E S+I NVL + H HKFE
Sbjct: 320 ESVWIHNQLTGDGFLSLFGK----EQVNREIHQSDIVNVLNMLHTHKFE 364
>XP_018843666.1 PREDICTED: transcription elongation factor SPT6 homolog isoform X1
[Juglans regia]
Length = 1668
Score = 85.9 bits (211), Expect(2) = 1e-27
Identities = 46/107 (42%), Positives = 66/107 (61%), Gaps = 15/107 (14%)
Frame = +3
Query: 174 VPFIAMYRKEMCVNLLQNKEEFLTDAE--------TPTLKMYKALWAVQKWDEKWLLLQR 329
+PFIAMYRKE C++LL++ E+ D + TPTLK +K LWA+Q D KWLLLQ+
Sbjct: 356 IPFIAMYRKEECLSLLKDPEQPEADDDDNQDRSDRTPTLKWHKVLWAIQDLDRKWLLLQK 415
Query: 330 QKSALRTAY-------ENRAYDVENEKIRSMVLDSILEALSEAKSER 449
+KSAL++ Y R YD + + +SI+++L A+SER
Sbjct: 416 RKSALQSYYNKRFEEESRRVYDETRLNLNQQLFESIMKSLKAAESER 462
Score = 65.9 bits (159), Expect(2) = 1e-27
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +1
Query: 451 SDEVDISKGQHKRPM*KSRYSICHESGYAEVAKNFGLTAEQFAKNLQVMYKTND-VEDPT 627
S E+ + +GQ+KRP KS YSIC ++G EVA FG ++EQF L + ND +EDP
Sbjct: 477 SGEIGVDEGQYKRPKRKSLYSICGKAGLWEVASKFGYSSEQFGLQLSLEKMRNDELEDPK 536
Query: 628 TSPEGVAAEF-CTIYSGDQLTVLKAA 702
+PE +A+ F C ++ Q VLK A
Sbjct: 537 ETPEEMASNFTCAMFETPQ-AVLKGA 561
>XP_018843668.1 PREDICTED: transcription elongation factor SPT6 homolog isoform X3
[Juglans regia]
Length = 1667
Score = 85.9 bits (211), Expect(2) = 1e-27
Identities = 46/107 (42%), Positives = 66/107 (61%), Gaps = 15/107 (14%)
Frame = +3
Query: 174 VPFIAMYRKEMCVNLLQNKEEFLTDAE--------TPTLKMYKALWAVQKWDEKWLLLQR 329
+PFIAMYRKE C++LL++ E+ D + TPTLK +K LWA+Q D KWLLLQ+
Sbjct: 355 IPFIAMYRKEECLSLLKDPEQPEADDDDNQDRSDRTPTLKWHKVLWAIQDLDRKWLLLQK 414
Query: 330 QKSALRTAY-------ENRAYDVENEKIRSMVLDSILEALSEAKSER 449
+KSAL++ Y R YD + + +SI+++L A+SER
Sbjct: 415 RKSALQSYYNKRFEEESRRVYDETRLNLNQQLFESIMKSLKAAESER 461
Score = 65.9 bits (159), Expect(2) = 1e-27
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +1
Query: 451 SDEVDISKGQHKRPM*KSRYSICHESGYAEVAKNFGLTAEQFAKNLQVMYKTND-VEDPT 627
S E+ + +GQ+KRP KS YSIC ++G EVA FG ++EQF L + ND +EDP
Sbjct: 476 SGEIGVDEGQYKRPKRKSLYSICGKAGLWEVASKFGYSSEQFGLQLSLEKMRNDELEDPK 535
Query: 628 TSPEGVAAEF-CTIYSGDQLTVLKAA 702
+PE +A+ F C ++ Q VLK A
Sbjct: 536 ETPEEMASNFTCAMFETPQ-AVLKGA 560
>XP_018843667.1 PREDICTED: transcription elongation factor SPT6 homolog isoform X2
[Juglans regia]
Length = 1667
Score = 85.9 bits (211), Expect(2) = 1e-27
Identities = 46/107 (42%), Positives = 66/107 (61%), Gaps = 15/107 (14%)
Frame = +3
Query: 174 VPFIAMYRKEMCVNLLQNKEEFLTDAE--------TPTLKMYKALWAVQKWDEKWLLLQR 329
+PFIAMYRKE C++LL++ E+ D + TPTLK +K LWA+Q D KWLLLQ+
Sbjct: 355 IPFIAMYRKEECLSLLKDPEQPEADDDDNQDRSDRTPTLKWHKVLWAIQDLDRKWLLLQK 414
Query: 330 QKSALRTAY-------ENRAYDVENEKIRSMVLDSILEALSEAKSER 449
+KSAL++ Y R YD + + +SI+++L A+SER
Sbjct: 415 RKSALQSYYNKRFEEESRRVYDETRLNLNQQLFESIMKSLKAAESER 461
Score = 65.9 bits (159), Expect(2) = 1e-27
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +1
Query: 451 SDEVDISKGQHKRPM*KSRYSICHESGYAEVAKNFGLTAEQFAKNLQVMYKTND-VEDPT 627
S E+ + +GQ+KRP KS YSIC ++G EVA FG ++EQF L + ND +EDP
Sbjct: 476 SGEIGVDEGQYKRPKRKSLYSICGKAGLWEVASKFGYSSEQFGLQLSLEKMRNDELEDPK 535
Query: 628 TSPEGVAAEF-CTIYSGDQLTVLKAA 702
+PE +A+ F C ++ Q VLK A
Sbjct: 536 ETPEEMASNFTCAMFETPQ-AVLKGA 560
>XP_011041349.1 PREDICTED: transcription elongation factor SPT6-like isoform X1
[Populus euphratica]
Length = 1692
Score = 82.0 bits (201), Expect(2) = 3e-27
Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 13/105 (12%)
Frame = +3
Query: 174 VPFIAMYRKEMCVNLLQNKEEFLTDA------ETPTLKMYKALWAVQKWDEKWLLLQRQK 335
+PFIAMYRKE C++LL++ ++ + +TPT K +K LWA+Q D KWLLLQ++K
Sbjct: 347 IPFIAMYRKEECLSLLKDPDQHEDNENSDDTDKTPTFKWHKVLWALQDLDRKWLLLQKRK 406
Query: 336 SALRTAY-------ENRAYDVENEKIRSMVLDSILEALSEAKSER 449
SAL + Y R YD + + +SIL++L A+SER
Sbjct: 407 SALNSYYNKRFEEESRRIYDETRLNLNQQLFESILKSLKTAESER 451
Score = 68.2 bits (165), Expect(2) = 3e-27
Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +1
Query: 457 EVDISKGQHKRPM*KSRYSICHESGYAEVAKNFGLTAEQFAKNLQVMYKTNDVEDPTTSP 636
EV + +GQ+KRPM +S+YSIC ++G EVA FG +AEQ L ++ ++++D +P
Sbjct: 468 EVGVDEGQYKRPMRRSQYSICSKAGLWEVASKFGYSAEQLGMQLSLLKMEDELQDAKETP 527
Query: 637 EGVAAEF-CTIYSGDQLTVLKAA 702
E +A+ F C ++ Q TVLK A
Sbjct: 528 EEMASNFTCAMFESPQ-TVLKGA 549
>XP_011041350.1 PREDICTED: transcription elongation factor SPT6-like isoform X2
[Populus euphratica]
Length = 1681
Score = 82.0 bits (201), Expect(2) = 3e-27
Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 13/105 (12%)
Frame = +3
Query: 174 VPFIAMYRKEMCVNLLQNKEEFLTDA------ETPTLKMYKALWAVQKWDEKWLLLQRQK 335
+PFIAMYRKE C++LL++ ++ + +TPT K +K LWA+Q D KWLLLQ++K
Sbjct: 347 IPFIAMYRKEECLSLLKDPDQHEDNENSDDTDKTPTFKWHKVLWALQDLDRKWLLLQKRK 406
Query: 336 SALRTAY-------ENRAYDVENEKIRSMVLDSILEALSEAKSER 449
SAL + Y R YD + + +SIL++L A+SER
Sbjct: 407 SALNSYYNKRFEEESRRIYDETRLNLNQQLFESILKSLKTAESER 451
Score = 68.2 bits (165), Expect(2) = 3e-27
Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +1
Query: 457 EVDISKGQHKRPM*KSRYSICHESGYAEVAKNFGLTAEQFAKNLQVMYKTNDVEDPTTSP 636
EV + +GQ+KRPM +S+YSIC ++G EVA FG +AEQ L ++ ++++D +P
Sbjct: 468 EVGVDEGQYKRPMRRSQYSICSKAGLWEVASKFGYSAEQLGMQLSLLKMEDELQDAKETP 527
Query: 637 EGVAAEF-CTIYSGDQLTVLKAA 702
E +A+ F C ++ Q TVLK A
Sbjct: 528 EEMASNFTCAMFESPQ-TVLKGA 549
>XP_011041352.1 PREDICTED: transcription elongation factor SPT6-like isoform X3
[Populus euphratica]
Length = 1648
Score = 82.0 bits (201), Expect(2) = 3e-27
Identities = 44/105 (41%), Positives = 64/105 (60%), Gaps = 13/105 (12%)
Frame = +3
Query: 174 VPFIAMYRKEMCVNLLQNKEEFLTDA------ETPTLKMYKALWAVQKWDEKWLLLQRQK 335
+PFIAMYRKE C++LL++ ++ + +TPT K +K LWA+Q D KWLLLQ++K
Sbjct: 347 IPFIAMYRKEECLSLLKDPDQHEDNENSDDTDKTPTFKWHKVLWALQDLDRKWLLLQKRK 406
Query: 336 SALRTAY-------ENRAYDVENEKIRSMVLDSILEALSEAKSER 449
SAL + Y R YD + + +SIL++L A+SER
Sbjct: 407 SALNSYYNKRFEEESRRIYDETRLNLNQQLFESILKSLKTAESER 451
Score = 68.2 bits (165), Expect(2) = 3e-27
Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +1
Query: 457 EVDISKGQHKRPM*KSRYSICHESGYAEVAKNFGLTAEQFAKNLQVMYKTNDVEDPTTSP 636
EV + +GQ+KRPM +S+YSIC ++G EVA FG +AEQ L ++ ++++D +P
Sbjct: 468 EVGVDEGQYKRPMRRSQYSICSKAGLWEVASKFGYSAEQLGMQLSLLKMEDELQDAKETP 527
Query: 637 EGVAAEF-CTIYSGDQLTVLKAA 702
E +A+ F C ++ Q TVLK A
Sbjct: 528 EEMASNFTCAMFESPQ-TVLKGA 549
>XP_002307949.2 hypothetical protein POPTR_0006s03040g [Populus trichocarpa]
EEE91472.2 hypothetical protein POPTR_0006s03040g
[Populus trichocarpa]
Length = 1487
Score = 83.2 bits (204), Expect(2) = 3e-27
Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 13/105 (12%)
Frame = +3
Query: 174 VPFIAMYRKEMCVNLLQNKEEFLTD------AETPTLKMYKALWAVQKWDEKWLLLQRQK 335
+PFIAMYRKE C++LL++ E+ D PT K +K LWA+Q D KWLLLQ++K
Sbjct: 346 IPFIAMYRKEECLSLLKDPEQHEDDENPYDTGRIPTFKWHKVLWAIQDLDRKWLLLQKRK 405
Query: 336 SALRTAY-------ENRAYDVENEKIRSMVLDSILEALSEAKSER 449
SAL Y R YD + + +SIL++L A+SER
Sbjct: 406 SALNAYYNKRFEEESRRIYDETRLNLNQQLFESILKSLKTAESER 450
Score = 67.0 bits (162), Expect(2) = 3e-27
Identities = 34/83 (40%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +1
Query: 457 EVDISKGQHKRPM*KSRYSICHESGYAEVAKNFGLTAEQFAKNLQVMYKTNDVEDPTTSP 636
EV + +GQ+KRPM +S+YS+C ++G EVA FG +AEQ L ++ ++++D +P
Sbjct: 467 EVVVDEGQYKRPMRRSQYSVCSKAGLWEVASKFGYSAEQLGMQLSLLKMEDELQDAKETP 526
Query: 637 EGVAAEF-CTIYSGDQLTVLKAA 702
E +A+ F C ++ Q TVLK A
Sbjct: 527 EEMASNFTCAMFESPQ-TVLKGA 548
>EMS61141.1 Transcription elongation factor SPT6 [Triticum urartu]
Length = 1650
Score = 82.4 bits (202), Expect(3) = 3e-27
Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 9/103 (8%)
Frame = +3
Query: 168 F*VPFIAMYRKEMCVNLLQNKE--EFLTDAETPTLKMYKALWAVQKWDEKWLLLQRQKSA 341
F VPFIAMYRKE C++LL++ + E + E +K +K LWAVQ D KWLLLQ++K A
Sbjct: 383 FEVPFIAMYRKESCLSLLKDNDSNEQANEEEKRKMKWHKLLWAVQTLDRKWLLLQKRKVA 442
Query: 342 LRTAYE-------NRAYDVENEKIRSMVLDSILEALSEAKSER 449
L+ YE R DV + + + +SI EAL +AKSE+
Sbjct: 443 LQVYYERRYEDEKRRIDDVTRQALNRQLYNSISEALRDAKSEK 485
Score = 55.8 bits (133), Expect(3) = 3e-27
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Frame = +1
Query: 475 GQHKRPM*KSRYSICHESGYAEVAKNFGLTAEQFAKNLQV--MYKTNDVEDPTTSPEGVA 648
GQ KRP KS YSICH++G EVA FG +AEQ ++L + + + +++ SPE VA
Sbjct: 507 GQFKRPKRKSLYSICHKAGLWEVANQFGRSAEQLGQHLTLTRIPEAGELDSGKDSPEDVA 566
Query: 649 AEF-CTIYSGDQLTVLKAA 702
A F C ++ Q VL+ A
Sbjct: 567 ANFTCAMFETPQ-DVLRGA 584
Score = 32.0 bits (71), Expect(3) = 3e-27
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +1
Query: 19 EAKWIYEHMFGSLAVSITAEFEHIAKLDKEQILSEIANVLRLFHDHKFE 165
E+ WI+ + G +S+ + + ++D+ S+I NVL + H HKFE
Sbjct: 340 ESVWIHNQLTGDGFLSLFSNEQVNREIDQ----SDIVNVLNMLHTHKFE 384
>XP_011040704.1 PREDICTED: transcription elongation factor SPT6-like isoform X1
[Populus euphratica]
Length = 1647
Score = 82.8 bits (203), Expect(2) = 7e-27
Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 13/105 (12%)
Frame = +3
Query: 174 VPFIAMYRKEMCVNLLQNKEEFLTD------AETPTLKMYKALWAVQKWDEKWLLLQRQK 335
+PFIAMYRKE C++LL++ E+ D PT K +K LWA+Q D KWLLLQ++K
Sbjct: 347 IPFIAMYRKEECLSLLKDPEQCEDDENPYDTGRIPTFKWHKVLWAIQDLDRKWLLLQKRK 406
Query: 336 SALRTAY-------ENRAYDVENEKIRSMVLDSILEALSEAKSER 449
SAL Y R YD + + +SIL++L A+SER
Sbjct: 407 SALNAYYNKRFEEESRRIYDETRLNLNQQLFESILKSLKTAESER 451
Score = 66.2 bits (160), Expect(2) = 7e-27
Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +1
Query: 457 EVDISKGQHKRPM*KSRYSICHESGYAEVAKNFGLTAEQFAKNLQVMYKTNDVEDPTTSP 636
EV + +GQ+KRPM +S+YSIC ++G EVA FG +AEQ L ++ ++++D +P
Sbjct: 468 EVGVDEGQYKRPMRRSQYSICSKAGLWEVASKFGYSAEQLGMQLSLLKMEDELQDAKETP 527
Query: 637 EGVAAEF-CTIYSGDQLTVLKAA 702
E +A+ F C ++ Q VLK A
Sbjct: 528 EEMASNFTCAMFESPQ-AVLKGA 549
>XP_011040705.1 PREDICTED: transcription elongation factor SPT6-like isoform X2
[Populus euphratica]
Length = 1636
Score = 82.8 bits (203), Expect(2) = 7e-27
Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 13/105 (12%)
Frame = +3
Query: 174 VPFIAMYRKEMCVNLLQNKEEFLTD------AETPTLKMYKALWAVQKWDEKWLLLQRQK 335
+PFIAMYRKE C++LL++ E+ D PT K +K LWA+Q D KWLLLQ++K
Sbjct: 347 IPFIAMYRKEECLSLLKDPEQCEDDENPYDTGRIPTFKWHKVLWAIQDLDRKWLLLQKRK 406
Query: 336 SALRTAY-------ENRAYDVENEKIRSMVLDSILEALSEAKSER 449
SAL Y R YD + + +SIL++L A+SER
Sbjct: 407 SALNAYYNKRFEEESRRIYDETRLNLNQQLFESILKSLKTAESER 451
Score = 66.2 bits (160), Expect(2) = 7e-27
Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +1
Query: 457 EVDISKGQHKRPM*KSRYSICHESGYAEVAKNFGLTAEQFAKNLQVMYKTNDVEDPTTSP 636
EV + +GQ+KRPM +S+YSIC ++G EVA FG +AEQ L ++ ++++D +P
Sbjct: 468 EVGVDEGQYKRPMRRSQYSICSKAGLWEVASKFGYSAEQLGMQLSLLKMEDELQDAKETP 527
Query: 637 EGVAAEF-CTIYSGDQLTVLKAA 702
E +A+ F C ++ Q VLK A
Sbjct: 528 EEMASNFTCAMFESPQ-AVLKGA 549
>XP_002322597.2 hypothetical protein POPTR_0016s02900g [Populus trichocarpa]
EEF04358.2 hypothetical protein POPTR_0016s02900g
[Populus trichocarpa]
Length = 1692
Score = 82.0 bits (201), Expect(2) = 9e-27
Identities = 44/105 (41%), Positives = 62/105 (59%), Gaps = 13/105 (12%)
Frame = +3
Query: 174 VPFIAMYRKEMCVNLL------QNKEEFLTDAETPTLKMYKALWAVQKWDEKWLLLQRQK 335
+PFIAMYRKE C++LL ++ E + + PT K +K LWA+Q D KWLLLQ++K
Sbjct: 345 IPFIAMYRKEECLSLLKDPDQHEDNENYDDTDKNPTFKWHKVLWAIQDLDRKWLLLQKRK 404
Query: 336 SALRTAY-------ENRAYDVENEKIRSMVLDSILEALSEAKSER 449
SAL + Y R YD + + +SIL++L A+SER
Sbjct: 405 SALNSYYNKRFEEESRRIYDETRLNLNQQLFESILKSLKTAESER 449
Score = 66.6 bits (161), Expect(2) = 9e-27
Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +1
Query: 457 EVDISKGQHKRPM*KSRYSICHESGYAEVAKNFGLTAEQFAKNLQVMYKTNDVEDPTTSP 636
EV +GQ+KRPM +S+YSIC ++G EVA FG +AEQ L ++ ++++D +P
Sbjct: 466 EVGADEGQYKRPMRRSQYSICSKAGLWEVASKFGYSAEQLGMQLSLLKMEDELQDAKETP 525
Query: 637 EGVAAEF-CTIYSGDQLTVLKAA 702
E +A+ F C ++ Q TVLK A
Sbjct: 526 EEMASNFTCAMFESPQ-TVLKGA 547
>XP_017603733.1 PREDICTED: transcription elongation factor SPT6-like [Gossypium
arboreum]
Length = 1584
Score = 83.2 bits (204), Expect(2) = 1e-26
Identities = 44/105 (41%), Positives = 63/105 (60%), Gaps = 13/105 (12%)
Frame = +3
Query: 174 VPFIAMYRKEMCVNLLQNKEEFLTDAE------TPTLKMYKALWAVQKWDEKWLLLQRQK 335
+PFIAMYRKE C++LLQ+ E+ D + PT+K ++ LWA+Q D KWLLLQ++K
Sbjct: 345 IPFIAMYRKEQCLSLLQDPEQHEVDDDQDKSEKAPTMKWHRVLWAIQDLDRKWLLLQKRK 404
Query: 336 SALRTAY-------ENRAYDVENEKIRSMVLDSILEALSEAKSER 449
S L++ Y R YD + + +SIL+ L A+SER
Sbjct: 405 SGLQSHYNKRFEEESRRIYDETRLNLNQQLFESILKDLRGAESER 449
Score = 64.7 bits (156), Expect(2) = 1e-26
Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +1
Query: 457 EVDISKGQHKRPM*KSRYSICHESGYAEVAKNFGLTAEQFAKNLQVMYKTNDVEDPTTSP 636
EV + +GQ+KRP +S+YSIC+++G EVA FG +AEQ +L + +++ED +P
Sbjct: 466 EVGVDEGQYKRPKRRSQYSICNKAGLWEVASKFGYSAEQLGAHLSLEKMDDELEDAKETP 525
Query: 637 EGVAAEF-CTIYSGDQLTVLKAA 702
E +A+ F C ++ Q VLK A
Sbjct: 526 EEIASNFTCAMFETPQ-AVLKGA 547
>XP_016676812.1 PREDICTED: transcription elongation factor SPT6-like [Gossypium
hirsutum]
Length = 1584
Score = 83.2 bits (204), Expect(2) = 1e-26
Identities = 44/105 (41%), Positives = 63/105 (60%), Gaps = 13/105 (12%)
Frame = +3
Query: 174 VPFIAMYRKEMCVNLLQNKEEFLTDAE------TPTLKMYKALWAVQKWDEKWLLLQRQK 335
+PFIAMYRKE C++LLQ+ E+ D + PT+K ++ LWA+Q D KWLLLQ++K
Sbjct: 345 IPFIAMYRKEQCLSLLQDPEQHEVDDDQDKSEKAPTMKWHRVLWAIQDLDRKWLLLQKRK 404
Query: 336 SALRTAY-------ENRAYDVENEKIRSMVLDSILEALSEAKSER 449
S L++ Y R YD + + +SIL+ L A+SER
Sbjct: 405 SGLQSHYNKRFEEESRRIYDETRLNLNQQLFESILKDLRGAESER 449
Score = 64.7 bits (156), Expect(2) = 1e-26
Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +1
Query: 457 EVDISKGQHKRPM*KSRYSICHESGYAEVAKNFGLTAEQFAKNLQVMYKTNDVEDPTTSP 636
EV + +GQ+KRP +S+YSIC+++G EVA FG +AEQ +L + +++ED +P
Sbjct: 466 EVGVDEGQYKRPKRRSQYSICNKAGLWEVASKFGYSAEQLGAHLSLEKMDDELEDAKETP 525
Query: 637 EGVAAEF-CTIYSGDQLTVLKAA 702
E +A+ F C ++ Q VLK A
Sbjct: 526 EEIASNFTCAMFETPQ-AVLKGA 547
>KHG09405.1 Transcription elongation factor SPT6 [Gossypium arboreum]
Length = 1294
Score = 83.2 bits (204), Expect(2) = 1e-26
Identities = 44/105 (41%), Positives = 63/105 (60%), Gaps = 13/105 (12%)
Frame = +3
Query: 174 VPFIAMYRKEMCVNLLQNKEEFLTDAE------TPTLKMYKALWAVQKWDEKWLLLQRQK 335
+PFIAMYRKE C++LLQ+ E+ D + PT+K ++ LWA+Q D KWLLLQ++K
Sbjct: 327 IPFIAMYRKEQCLSLLQDPEQHEVDDDQDKSEKAPTMKWHRVLWAIQDLDRKWLLLQKRK 386
Query: 336 SALRTAY-------ENRAYDVENEKIRSMVLDSILEALSEAKSER 449
S L++ Y R YD + + +SIL+ L A+SER
Sbjct: 387 SGLQSHYNKRFEEESRRIYDETRLNLNQQLFESILKDLRGAESER 431
Score = 64.7 bits (156), Expect(2) = 1e-26
Identities = 34/83 (40%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +1
Query: 457 EVDISKGQHKRPM*KSRYSICHESGYAEVAKNFGLTAEQFAKNLQVMYKTNDVEDPTTSP 636
EV + +GQ+KRP +S+YSIC+++G EVA FG +AEQ +L + +++ED +P
Sbjct: 448 EVGVDEGQYKRPKRRSQYSICNKAGLWEVASKFGYSAEQLGAHLSLEKMDDELEDAKETP 507
Query: 637 EGVAAEF-CTIYSGDQLTVLKAA 702
E +A+ F C ++ Q VLK A
Sbjct: 508 EEIASNFTCAMFETPQ-AVLKGA 529