BLASTX nr result
ID: Ephedra29_contig00015577
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00015577
(296 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_015944181.1 PREDICTED: DNA mismatch repair protein MSH2 [Arac... 195 5e-56
XP_016189003.1 PREDICTED: DNA mismatch repair protein MSH2 [Arac... 193 2e-55
XP_010265279.1 PREDICTED: DNA mismatch repair protein MSH2 [Nelu... 193 2e-55
XP_010916140.1 PREDICTED: DNA mismatch repair protein MSH2 isofo... 192 6e-55
XP_020097414.1 DNA mismatch repair protein MSH2 [Ananas comosus]... 192 6e-55
XP_010916139.1 PREDICTED: DNA mismatch repair protein MSH2 isofo... 192 6e-55
XP_009404391.1 PREDICTED: DNA mismatch repair protein MSH2 [Musa... 192 6e-55
XP_013458054.1 DNA mismatch repair MSH3-like protein [Medicago t... 191 9e-55
JAU44745.1 DNA mismatch repair protein MSH2, partial [Noccaea ca... 186 1e-54
XP_016901359.1 PREDICTED: DNA mismatch repair protein MSH2 isofo... 190 2e-54
XP_008453367.1 PREDICTED: DNA mismatch repair protein MSH2 isofo... 190 3e-54
JAU15575.1 DNA mismatch repair protein MSH2, partial [Noccaea ca... 186 5e-54
ACL53653.1 unknown [Zea mays] 186 5e-54
XP_015637550.1 PREDICTED: DNA mismatch repair protein MSH2 [Oryz... 189 6e-54
AAZ42361.1 DNA mismatch repair protein MSH2 [Physcomitrella patens] 189 8e-54
XP_001779144.1 predicted protein [Physcomitrella patens] EDQ5609... 189 8e-54
XP_011648756.1 PREDICTED: DNA mismatch repair protein MSH2 [Cucu... 188 1e-53
XP_009346787.1 PREDICTED: DNA mismatch repair protein MSH2 [Pyru... 188 1e-53
XP_008785817.1 PREDICTED: DNA mismatch repair protein MSH2 [Phoe... 188 1e-53
XP_008374721.1 PREDICTED: DNA mismatch repair protein MSH2 [Malu... 188 1e-53
>XP_015944181.1 PREDICTED: DNA mismatch repair protein MSH2 [Arachis duranensis]
Length = 943
Score = 195 bits (495), Expect = 5e-56
Identities = 89/98 (90%), Positives = 95/98 (96%)
Frame = +2
Query: 2 PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
PEITS+DEGDIILEGSRHPCVEAQD VNFIPNDC L+R KSWFQIITGPNMGGKST+IRQ
Sbjct: 621 PEITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLIREKSWFQIITGPNMGGKSTFIRQ 680
Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
+GVN+LMAQVGCFVPCDNA+ISVRDCIFARVGAGDCQL
Sbjct: 681 VGVNILMAQVGCFVPCDNASISVRDCIFARVGAGDCQL 718
>XP_016189003.1 PREDICTED: DNA mismatch repair protein MSH2 [Arachis ipaensis]
Length = 943
Score = 193 bits (491), Expect = 2e-55
Identities = 89/98 (90%), Positives = 94/98 (95%)
Frame = +2
Query: 2 PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
PEITS DEGDIILEGSRHPCVEAQD VNFIPNDC L+R KSWFQIITGPNMGGKST+IRQ
Sbjct: 621 PEITSWDEGDIILEGSRHPCVEAQDWVNFIPNDCKLIREKSWFQIITGPNMGGKSTFIRQ 680
Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
+GVN+LMAQVGCFVPCDNA+ISVRDCIFARVGAGDCQL
Sbjct: 681 VGVNILMAQVGCFVPCDNASISVRDCIFARVGAGDCQL 718
>XP_010265279.1 PREDICTED: DNA mismatch repair protein MSH2 [Nelumbo nucifera]
Length = 942
Score = 193 bits (490), Expect = 2e-55
Identities = 88/98 (89%), Positives = 94/98 (95%)
Frame = +2
Query: 2 PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
P+IT +D+GDIILEGSRHPCVEAQDGVNFIPNDC+LVR KSWFQIITGPNMGGKSTYIRQ
Sbjct: 619 PDITPSDQGDIILEGSRHPCVEAQDGVNFIPNDCALVRGKSWFQIITGPNMGGKSTYIRQ 678
Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
+GVN+LMAQVGCFVPCD A ISVRDCIFARVGAGDCQL
Sbjct: 679 VGVNILMAQVGCFVPCDKARISVRDCIFARVGAGDCQL 716
>XP_010916140.1 PREDICTED: DNA mismatch repair protein MSH2 isoform X2 [Elaeis
guineensis]
Length = 920
Score = 192 bits (487), Expect = 6e-55
Identities = 87/98 (88%), Positives = 95/98 (96%)
Frame = +2
Query: 2 PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
P+IT +D+GDIILEGSRHPCVEAQDGVNFIPNDC+LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 598 PDITPSDKGDIILEGSRHPCVEAQDGVNFIPNDCTLVRGKSWFQIITGPNMGGKSTFIRQ 657
Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
+GVNVLMAQVGCFVPCD A++SVRDCIFARVGAGDCQL
Sbjct: 658 VGVNVLMAQVGCFVPCDRASVSVRDCIFARVGAGDCQL 695
>XP_020097414.1 DNA mismatch repair protein MSH2 [Ananas comosus] XP_020097415.1
DNA mismatch repair protein MSH2 [Ananas comosus]
Length = 941
Score = 192 bits (487), Expect = 6e-55
Identities = 86/98 (87%), Positives = 95/98 (96%)
Frame = +2
Query: 2 PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
P+IT +DEGDIILEGSRHPCVEAQDGVNFIPNDC+LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 620 PDITPSDEGDIILEGSRHPCVEAQDGVNFIPNDCTLVRGKSWFQIITGPNMGGKSTFIRQ 679
Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
+GVNVLMAQVGC+VPCD A++S+RDCIFARVGAGDCQL
Sbjct: 680 VGVNVLMAQVGCYVPCDRASVSIRDCIFARVGAGDCQL 717
>XP_010916139.1 PREDICTED: DNA mismatch repair protein MSH2 isoform X1 [Elaeis
guineensis]
Length = 942
Score = 192 bits (487), Expect = 6e-55
Identities = 87/98 (88%), Positives = 95/98 (96%)
Frame = +2
Query: 2 PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
P+IT +D+GDIILEGSRHPCVEAQDGVNFIPNDC+LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 620 PDITPSDKGDIILEGSRHPCVEAQDGVNFIPNDCTLVRGKSWFQIITGPNMGGKSTFIRQ 679
Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
+GVNVLMAQVGCFVPCD A++SVRDCIFARVGAGDCQL
Sbjct: 680 VGVNVLMAQVGCFVPCDRASVSVRDCIFARVGAGDCQL 717
>XP_009404391.1 PREDICTED: DNA mismatch repair protein MSH2 [Musa acuminata subsp.
malaccensis]
Length = 942
Score = 192 bits (487), Expect = 6e-55
Identities = 87/98 (88%), Positives = 94/98 (95%)
Frame = +2
Query: 2 PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
P+IT +D+GDIILEGSRHPCVEAQDGVNFIPNDC LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 620 PDITPSDQGDIILEGSRHPCVEAQDGVNFIPNDCKLVRGKSWFQIITGPNMGGKSTFIRQ 679
Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
+GVNVLMAQVGCFVPC+ ATIS+RDCIFARVGAGDCQL
Sbjct: 680 VGVNVLMAQVGCFVPCERATISIRDCIFARVGAGDCQL 717
>XP_013458054.1 DNA mismatch repair MSH3-like protein [Medicago truncatula]
KEH32085.1 DNA mismatch repair MSH3-like protein
[Medicago truncatula]
Length = 941
Score = 191 bits (486), Expect = 9e-55
Identities = 87/98 (88%), Positives = 94/98 (95%)
Frame = +2
Query: 2 PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
P+ITS+DEGDIILEGSRHPCVEAQD VNFIPNDC L+R KSWFQIITGPNMGGKST+IRQ
Sbjct: 620 PDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQ 679
Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
+GVN+LMAQVGCFVPCD A+ISVRDCIFARVGAGDCQL
Sbjct: 680 VGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQL 717
>JAU44745.1 DNA mismatch repair protein MSH2, partial [Noccaea caerulescens]
Length = 554
Score = 186 bits (473), Expect = 1e-54
Identities = 84/98 (85%), Positives = 92/98 (93%)
Frame = +2
Query: 2 PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
PE+TS+D GDI+LEGSRHPCVEAQD VNFIPNDC L+R KSWFQIITGPNMGGKST+IRQ
Sbjct: 236 PEVTSSDVGDIVLEGSRHPCVEAQDWVNFIPNDCRLIRGKSWFQIITGPNMGGKSTFIRQ 295
Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
+GV VLMAQVGCFVPCD A+IS+RDCIFARVGAGDCQL
Sbjct: 296 VGVTVLMAQVGCFVPCDKASISIRDCIFARVGAGDCQL 333
>XP_016901359.1 PREDICTED: DNA mismatch repair protein MSH2 isoform X2 [Cucumis
melo]
Length = 856
Score = 190 bits (482), Expect = 2e-54
Identities = 87/98 (88%), Positives = 94/98 (95%)
Frame = +2
Query: 2 PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
P+ITS+DEG+IILEGSRHPCVEAQD VNFIPNDC LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 533 PDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSWFQIITGPNMGGKSTFIRQ 592
Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
+GVN+LMAQVGCFVPCD A+ISVRDCIFARVGAGDCQL
Sbjct: 593 VGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQL 630
>XP_008453367.1 PREDICTED: DNA mismatch repair protein MSH2 isoform X1 [Cucumis
melo]
Length = 942
Score = 190 bits (482), Expect = 3e-54
Identities = 87/98 (88%), Positives = 94/98 (95%)
Frame = +2
Query: 2 PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
P+ITS+DEG+IILEGSRHPCVEAQD VNFIPNDC LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 619 PDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSWFQIITGPNMGGKSTFIRQ 678
Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
+GVN+LMAQVGCFVPCD A+ISVRDCIFARVGAGDCQL
Sbjct: 679 VGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQL 716
>JAU15575.1 DNA mismatch repair protein MSH2, partial [Noccaea caerulescens]
Length = 635
Score = 186 bits (473), Expect = 5e-54
Identities = 84/98 (85%), Positives = 92/98 (93%)
Frame = +2
Query: 2 PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
PE+TS+D GDI+LEGSRHPCVEAQD VNFIPNDC L+R KSWFQIITGPNMGGKST+IRQ
Sbjct: 316 PEVTSSDVGDIVLEGSRHPCVEAQDWVNFIPNDCRLIRGKSWFQIITGPNMGGKSTFIRQ 375
Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
+GV VLMAQVGCFVPCD A+IS+RDCIFARVGAGDCQL
Sbjct: 376 VGVTVLMAQVGCFVPCDKASISIRDCIFARVGAGDCQL 413
>ACL53653.1 unknown [Zea mays]
Length = 618
Score = 186 bits (472), Expect = 5e-54
Identities = 85/98 (86%), Positives = 94/98 (95%)
Frame = +2
Query: 2 PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
P+IT++DEGDI+L GSRHPC+EAQDGVNFIPNDC+LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 296 PDITASDEGDIVLLGSRHPCLEAQDGVNFIPNDCTLVRGKSWFQIITGPNMGGKSTFIRQ 355
Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
+GVNVLMAQVG FVPCD A+ISVRDCIFARVGAGDCQL
Sbjct: 356 VGVNVLMAQVGSFVPCDQASISVRDCIFARVGAGDCQL 393
>XP_015637550.1 PREDICTED: DNA mismatch repair protein MSH2 [Oryza sativa Japonica
Group] EEC78891.1 hypothetical protein OsI_19262 [Oryza
sativa Indica Group] EEE63066.1 hypothetical protein
OsJ_17874 [Oryza sativa Japonica Group] BAS93104.1
Os05g0274200 [Oryza sativa Japonica Group]
Length = 942
Score = 189 bits (480), Expect = 6e-54
Identities = 87/98 (88%), Positives = 95/98 (96%)
Frame = +2
Query: 2 PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
PEIT+++EGDIILEGSRHPC+EAQDGVNFIPNDC+LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 620 PEITASEEGDIILEGSRHPCLEAQDGVNFIPNDCTLVREKSWFQIITGPNMGGKSTFIRQ 679
Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
+GVNVLMAQVG FVPCD A+ISVRDCIFARVGAGDCQL
Sbjct: 680 VGVNVLMAQVGSFVPCDRASISVRDCIFARVGAGDCQL 717
>AAZ42361.1 DNA mismatch repair protein MSH2 [Physcomitrella patens]
Length = 951
Score = 189 bits (479), Expect = 8e-54
Identities = 89/98 (90%), Positives = 91/98 (92%)
Frame = +2
Query: 2 PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
P ITSADEGDIILEGSRHPCVEAQD VNFI NDC LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 623 PSITSADEGDIILEGSRHPCVEAQDDVNFISNDCRLVRGKSWFQIITGPNMGGKSTFIRQ 682
Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
+GVNVLMAQVGCFVPCD A ISVRDCIFARVGAGDCQL
Sbjct: 683 VGVNVLMAQVGCFVPCDRAEISVRDCIFARVGAGDCQL 720
>XP_001779144.1 predicted protein [Physcomitrella patens] EDQ56090.1 predicted
protein [Physcomitrella patens]
Length = 956
Score = 189 bits (479), Expect = 8e-54
Identities = 89/98 (90%), Positives = 91/98 (92%)
Frame = +2
Query: 2 PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
P ITSADEGDIILEGSRHPCVEAQD VNFI NDC LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 628 PSITSADEGDIILEGSRHPCVEAQDDVNFISNDCRLVRGKSWFQIITGPNMGGKSTFIRQ 687
Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
+GVNVLMAQVGCFVPCD A ISVRDCIFARVGAGDCQL
Sbjct: 688 VGVNVLMAQVGCFVPCDRAEISVRDCIFARVGAGDCQL 725
>XP_011648756.1 PREDICTED: DNA mismatch repair protein MSH2 [Cucumis sativus]
KGN63799.1 hypothetical protein Csa_1G020900 [Cucumis
sativus]
Length = 942
Score = 188 bits (477), Expect = 1e-53
Identities = 86/98 (87%), Positives = 94/98 (95%)
Frame = +2
Query: 2 PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
P+ITS++EG+IILEGSRHPCVEAQD VNFIPNDC LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 619 PDITSSNEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSWFQIITGPNMGGKSTFIRQ 678
Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
+GVN+LMAQVGCFVPCD A+ISVRDCIFARVGAGDCQL
Sbjct: 679 VGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQL 716
>XP_009346787.1 PREDICTED: DNA mismatch repair protein MSH2 [Pyrus x
bretschneideri]
Length = 942
Score = 188 bits (477), Expect = 1e-53
Identities = 87/98 (88%), Positives = 92/98 (93%)
Frame = +2
Query: 2 PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
P IT DEGDIILEGSRHPCVEAQD VNFIPNDC LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 619 PVITPPDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSWFQIITGPNMGGKSTFIRQ 678
Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
+GVN+LMAQVGCFVPCD+A+ISVRDCIFARVGAGDCQL
Sbjct: 679 VGVNILMAQVGCFVPCDSASISVRDCIFARVGAGDCQL 716
>XP_008785817.1 PREDICTED: DNA mismatch repair protein MSH2 [Phoenix dactylifera]
Length = 942
Score = 188 bits (477), Expect = 1e-53
Identities = 83/98 (84%), Positives = 94/98 (95%)
Frame = +2
Query: 2 PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
P++T +D+GDI+LEGSRHPCVEAQDGVNFIPNDC+L R KSWFQIITGPNMGGKST+IRQ
Sbjct: 620 PDLTPSDKGDIVLEGSRHPCVEAQDGVNFIPNDCTLERGKSWFQIITGPNMGGKSTFIRQ 679
Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
+GVN+LMAQVGCFVPCD A++SVRDCIFARVGAGDCQL
Sbjct: 680 VGVNILMAQVGCFVPCDRASVSVRDCIFARVGAGDCQL 717
>XP_008374721.1 PREDICTED: DNA mismatch repair protein MSH2 [Malus domestica]
Length = 942
Score = 188 bits (477), Expect = 1e-53
Identities = 87/98 (88%), Positives = 92/98 (93%)
Frame = +2
Query: 2 PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
P IT DEGDIILEGSRHPCVEAQD VNFIPNDC LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 619 PVITPPDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSWFQIITGPNMGGKSTFIRQ 678
Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
+GVN+LMAQVGCFVPCD+A+ISVRDCIFARVGAGDCQL
Sbjct: 679 VGVNILMAQVGCFVPCDSASISVRDCIFARVGAGDCQL 716