BLASTX nr result

ID: Ephedra29_contig00015577 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00015577
         (296 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_015944181.1 PREDICTED: DNA mismatch repair protein MSH2 [Arac...   195   5e-56
XP_016189003.1 PREDICTED: DNA mismatch repair protein MSH2 [Arac...   193   2e-55
XP_010265279.1 PREDICTED: DNA mismatch repair protein MSH2 [Nelu...   193   2e-55
XP_010916140.1 PREDICTED: DNA mismatch repair protein MSH2 isofo...   192   6e-55
XP_020097414.1 DNA mismatch repair protein MSH2 [Ananas comosus]...   192   6e-55
XP_010916139.1 PREDICTED: DNA mismatch repair protein MSH2 isofo...   192   6e-55
XP_009404391.1 PREDICTED: DNA mismatch repair protein MSH2 [Musa...   192   6e-55
XP_013458054.1 DNA mismatch repair MSH3-like protein [Medicago t...   191   9e-55
JAU44745.1 DNA mismatch repair protein MSH2, partial [Noccaea ca...   186   1e-54
XP_016901359.1 PREDICTED: DNA mismatch repair protein MSH2 isofo...   190   2e-54
XP_008453367.1 PREDICTED: DNA mismatch repair protein MSH2 isofo...   190   3e-54
JAU15575.1 DNA mismatch repair protein MSH2, partial [Noccaea ca...   186   5e-54
ACL53653.1 unknown [Zea mays]                                         186   5e-54
XP_015637550.1 PREDICTED: DNA mismatch repair protein MSH2 [Oryz...   189   6e-54
AAZ42361.1 DNA mismatch repair protein MSH2 [Physcomitrella patens]   189   8e-54
XP_001779144.1 predicted protein [Physcomitrella patens] EDQ5609...   189   8e-54
XP_011648756.1 PREDICTED: DNA mismatch repair protein MSH2 [Cucu...   188   1e-53
XP_009346787.1 PREDICTED: DNA mismatch repair protein MSH2 [Pyru...   188   1e-53
XP_008785817.1 PREDICTED: DNA mismatch repair protein MSH2 [Phoe...   188   1e-53
XP_008374721.1 PREDICTED: DNA mismatch repair protein MSH2 [Malu...   188   1e-53

>XP_015944181.1 PREDICTED: DNA mismatch repair protein MSH2 [Arachis duranensis]
          Length = 943

 Score =  195 bits (495), Expect = 5e-56
 Identities = 89/98 (90%), Positives = 95/98 (96%)
 Frame = +2

Query: 2   PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
           PEITS+DEGDIILEGSRHPCVEAQD VNFIPNDC L+R KSWFQIITGPNMGGKST+IRQ
Sbjct: 621 PEITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLIREKSWFQIITGPNMGGKSTFIRQ 680

Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
           +GVN+LMAQVGCFVPCDNA+ISVRDCIFARVGAGDCQL
Sbjct: 681 VGVNILMAQVGCFVPCDNASISVRDCIFARVGAGDCQL 718


>XP_016189003.1 PREDICTED: DNA mismatch repair protein MSH2 [Arachis ipaensis]
          Length = 943

 Score =  193 bits (491), Expect = 2e-55
 Identities = 89/98 (90%), Positives = 94/98 (95%)
 Frame = +2

Query: 2   PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
           PEITS DEGDIILEGSRHPCVEAQD VNFIPNDC L+R KSWFQIITGPNMGGKST+IRQ
Sbjct: 621 PEITSWDEGDIILEGSRHPCVEAQDWVNFIPNDCKLIREKSWFQIITGPNMGGKSTFIRQ 680

Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
           +GVN+LMAQVGCFVPCDNA+ISVRDCIFARVGAGDCQL
Sbjct: 681 VGVNILMAQVGCFVPCDNASISVRDCIFARVGAGDCQL 718


>XP_010265279.1 PREDICTED: DNA mismatch repair protein MSH2 [Nelumbo nucifera]
          Length = 942

 Score =  193 bits (490), Expect = 2e-55
 Identities = 88/98 (89%), Positives = 94/98 (95%)
 Frame = +2

Query: 2   PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
           P+IT +D+GDIILEGSRHPCVEAQDGVNFIPNDC+LVR KSWFQIITGPNMGGKSTYIRQ
Sbjct: 619 PDITPSDQGDIILEGSRHPCVEAQDGVNFIPNDCALVRGKSWFQIITGPNMGGKSTYIRQ 678

Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
           +GVN+LMAQVGCFVPCD A ISVRDCIFARVGAGDCQL
Sbjct: 679 VGVNILMAQVGCFVPCDKARISVRDCIFARVGAGDCQL 716


>XP_010916140.1 PREDICTED: DNA mismatch repair protein MSH2 isoform X2 [Elaeis
           guineensis]
          Length = 920

 Score =  192 bits (487), Expect = 6e-55
 Identities = 87/98 (88%), Positives = 95/98 (96%)
 Frame = +2

Query: 2   PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
           P+IT +D+GDIILEGSRHPCVEAQDGVNFIPNDC+LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 598 PDITPSDKGDIILEGSRHPCVEAQDGVNFIPNDCTLVRGKSWFQIITGPNMGGKSTFIRQ 657

Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
           +GVNVLMAQVGCFVPCD A++SVRDCIFARVGAGDCQL
Sbjct: 658 VGVNVLMAQVGCFVPCDRASVSVRDCIFARVGAGDCQL 695


>XP_020097414.1 DNA mismatch repair protein MSH2 [Ananas comosus] XP_020097415.1
           DNA mismatch repair protein MSH2 [Ananas comosus]
          Length = 941

 Score =  192 bits (487), Expect = 6e-55
 Identities = 86/98 (87%), Positives = 95/98 (96%)
 Frame = +2

Query: 2   PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
           P+IT +DEGDIILEGSRHPCVEAQDGVNFIPNDC+LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 620 PDITPSDEGDIILEGSRHPCVEAQDGVNFIPNDCTLVRGKSWFQIITGPNMGGKSTFIRQ 679

Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
           +GVNVLMAQVGC+VPCD A++S+RDCIFARVGAGDCQL
Sbjct: 680 VGVNVLMAQVGCYVPCDRASVSIRDCIFARVGAGDCQL 717


>XP_010916139.1 PREDICTED: DNA mismatch repair protein MSH2 isoform X1 [Elaeis
           guineensis]
          Length = 942

 Score =  192 bits (487), Expect = 6e-55
 Identities = 87/98 (88%), Positives = 95/98 (96%)
 Frame = +2

Query: 2   PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
           P+IT +D+GDIILEGSRHPCVEAQDGVNFIPNDC+LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 620 PDITPSDKGDIILEGSRHPCVEAQDGVNFIPNDCTLVRGKSWFQIITGPNMGGKSTFIRQ 679

Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
           +GVNVLMAQVGCFVPCD A++SVRDCIFARVGAGDCQL
Sbjct: 680 VGVNVLMAQVGCFVPCDRASVSVRDCIFARVGAGDCQL 717


>XP_009404391.1 PREDICTED: DNA mismatch repair protein MSH2 [Musa acuminata subsp.
           malaccensis]
          Length = 942

 Score =  192 bits (487), Expect = 6e-55
 Identities = 87/98 (88%), Positives = 94/98 (95%)
 Frame = +2

Query: 2   PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
           P+IT +D+GDIILEGSRHPCVEAQDGVNFIPNDC LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 620 PDITPSDQGDIILEGSRHPCVEAQDGVNFIPNDCKLVRGKSWFQIITGPNMGGKSTFIRQ 679

Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
           +GVNVLMAQVGCFVPC+ ATIS+RDCIFARVGAGDCQL
Sbjct: 680 VGVNVLMAQVGCFVPCERATISIRDCIFARVGAGDCQL 717


>XP_013458054.1 DNA mismatch repair MSH3-like protein [Medicago truncatula]
           KEH32085.1 DNA mismatch repair MSH3-like protein
           [Medicago truncatula]
          Length = 941

 Score =  191 bits (486), Expect = 9e-55
 Identities = 87/98 (88%), Positives = 94/98 (95%)
 Frame = +2

Query: 2   PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
           P+ITS+DEGDIILEGSRHPCVEAQD VNFIPNDC L+R KSWFQIITGPNMGGKST+IRQ
Sbjct: 620 PDITSSDEGDIILEGSRHPCVEAQDWVNFIPNDCKLIRGKSWFQIITGPNMGGKSTFIRQ 679

Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
           +GVN+LMAQVGCFVPCD A+ISVRDCIFARVGAGDCQL
Sbjct: 680 VGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQL 717


>JAU44745.1 DNA mismatch repair protein MSH2, partial [Noccaea caerulescens]
          Length = 554

 Score =  186 bits (473), Expect = 1e-54
 Identities = 84/98 (85%), Positives = 92/98 (93%)
 Frame = +2

Query: 2   PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
           PE+TS+D GDI+LEGSRHPCVEAQD VNFIPNDC L+R KSWFQIITGPNMGGKST+IRQ
Sbjct: 236 PEVTSSDVGDIVLEGSRHPCVEAQDWVNFIPNDCRLIRGKSWFQIITGPNMGGKSTFIRQ 295

Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
           +GV VLMAQVGCFVPCD A+IS+RDCIFARVGAGDCQL
Sbjct: 296 VGVTVLMAQVGCFVPCDKASISIRDCIFARVGAGDCQL 333


>XP_016901359.1 PREDICTED: DNA mismatch repair protein MSH2 isoform X2 [Cucumis
           melo]
          Length = 856

 Score =  190 bits (482), Expect = 2e-54
 Identities = 87/98 (88%), Positives = 94/98 (95%)
 Frame = +2

Query: 2   PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
           P+ITS+DEG+IILEGSRHPCVEAQD VNFIPNDC LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 533 PDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSWFQIITGPNMGGKSTFIRQ 592

Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
           +GVN+LMAQVGCFVPCD A+ISVRDCIFARVGAGDCQL
Sbjct: 593 VGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQL 630


>XP_008453367.1 PREDICTED: DNA mismatch repair protein MSH2 isoform X1 [Cucumis
           melo]
          Length = 942

 Score =  190 bits (482), Expect = 3e-54
 Identities = 87/98 (88%), Positives = 94/98 (95%)
 Frame = +2

Query: 2   PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
           P+ITS+DEG+IILEGSRHPCVEAQD VNFIPNDC LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 619 PDITSSDEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSWFQIITGPNMGGKSTFIRQ 678

Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
           +GVN+LMAQVGCFVPCD A+ISVRDCIFARVGAGDCQL
Sbjct: 679 VGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQL 716


>JAU15575.1 DNA mismatch repair protein MSH2, partial [Noccaea caerulescens]
          Length = 635

 Score =  186 bits (473), Expect = 5e-54
 Identities = 84/98 (85%), Positives = 92/98 (93%)
 Frame = +2

Query: 2   PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
           PE+TS+D GDI+LEGSRHPCVEAQD VNFIPNDC L+R KSWFQIITGPNMGGKST+IRQ
Sbjct: 316 PEVTSSDVGDIVLEGSRHPCVEAQDWVNFIPNDCRLIRGKSWFQIITGPNMGGKSTFIRQ 375

Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
           +GV VLMAQVGCFVPCD A+IS+RDCIFARVGAGDCQL
Sbjct: 376 VGVTVLMAQVGCFVPCDKASISIRDCIFARVGAGDCQL 413


>ACL53653.1 unknown [Zea mays]
          Length = 618

 Score =  186 bits (472), Expect = 5e-54
 Identities = 85/98 (86%), Positives = 94/98 (95%)
 Frame = +2

Query: 2   PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
           P+IT++DEGDI+L GSRHPC+EAQDGVNFIPNDC+LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 296 PDITASDEGDIVLLGSRHPCLEAQDGVNFIPNDCTLVRGKSWFQIITGPNMGGKSTFIRQ 355

Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
           +GVNVLMAQVG FVPCD A+ISVRDCIFARVGAGDCQL
Sbjct: 356 VGVNVLMAQVGSFVPCDQASISVRDCIFARVGAGDCQL 393


>XP_015637550.1 PREDICTED: DNA mismatch repair protein MSH2 [Oryza sativa Japonica
           Group] EEC78891.1 hypothetical protein OsI_19262 [Oryza
           sativa Indica Group] EEE63066.1 hypothetical protein
           OsJ_17874 [Oryza sativa Japonica Group] BAS93104.1
           Os05g0274200 [Oryza sativa Japonica Group]
          Length = 942

 Score =  189 bits (480), Expect = 6e-54
 Identities = 87/98 (88%), Positives = 95/98 (96%)
 Frame = +2

Query: 2   PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
           PEIT+++EGDIILEGSRHPC+EAQDGVNFIPNDC+LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 620 PEITASEEGDIILEGSRHPCLEAQDGVNFIPNDCTLVREKSWFQIITGPNMGGKSTFIRQ 679

Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
           +GVNVLMAQVG FVPCD A+ISVRDCIFARVGAGDCQL
Sbjct: 680 VGVNVLMAQVGSFVPCDRASISVRDCIFARVGAGDCQL 717


>AAZ42361.1 DNA mismatch repair protein MSH2 [Physcomitrella patens]
          Length = 951

 Score =  189 bits (479), Expect = 8e-54
 Identities = 89/98 (90%), Positives = 91/98 (92%)
 Frame = +2

Query: 2   PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
           P ITSADEGDIILEGSRHPCVEAQD VNFI NDC LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 623 PSITSADEGDIILEGSRHPCVEAQDDVNFISNDCRLVRGKSWFQIITGPNMGGKSTFIRQ 682

Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
           +GVNVLMAQVGCFVPCD A ISVRDCIFARVGAGDCQL
Sbjct: 683 VGVNVLMAQVGCFVPCDRAEISVRDCIFARVGAGDCQL 720


>XP_001779144.1 predicted protein [Physcomitrella patens] EDQ56090.1 predicted
           protein [Physcomitrella patens]
          Length = 956

 Score =  189 bits (479), Expect = 8e-54
 Identities = 89/98 (90%), Positives = 91/98 (92%)
 Frame = +2

Query: 2   PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
           P ITSADEGDIILEGSRHPCVEAQD VNFI NDC LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 628 PSITSADEGDIILEGSRHPCVEAQDDVNFISNDCRLVRGKSWFQIITGPNMGGKSTFIRQ 687

Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
           +GVNVLMAQVGCFVPCD A ISVRDCIFARVGAGDCQL
Sbjct: 688 VGVNVLMAQVGCFVPCDRAEISVRDCIFARVGAGDCQL 725


>XP_011648756.1 PREDICTED: DNA mismatch repair protein MSH2 [Cucumis sativus]
           KGN63799.1 hypothetical protein Csa_1G020900 [Cucumis
           sativus]
          Length = 942

 Score =  188 bits (477), Expect = 1e-53
 Identities = 86/98 (87%), Positives = 94/98 (95%)
 Frame = +2

Query: 2   PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
           P+ITS++EG+IILEGSRHPCVEAQD VNFIPNDC LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 619 PDITSSNEGNIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSWFQIITGPNMGGKSTFIRQ 678

Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
           +GVN+LMAQVGCFVPCD A+ISVRDCIFARVGAGDCQL
Sbjct: 679 VGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQL 716


>XP_009346787.1 PREDICTED: DNA mismatch repair protein MSH2 [Pyrus x
           bretschneideri]
          Length = 942

 Score =  188 bits (477), Expect = 1e-53
 Identities = 87/98 (88%), Positives = 92/98 (93%)
 Frame = +2

Query: 2   PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
           P IT  DEGDIILEGSRHPCVEAQD VNFIPNDC LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 619 PVITPPDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSWFQIITGPNMGGKSTFIRQ 678

Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
           +GVN+LMAQVGCFVPCD+A+ISVRDCIFARVGAGDCQL
Sbjct: 679 VGVNILMAQVGCFVPCDSASISVRDCIFARVGAGDCQL 716


>XP_008785817.1 PREDICTED: DNA mismatch repair protein MSH2 [Phoenix dactylifera]
          Length = 942

 Score =  188 bits (477), Expect = 1e-53
 Identities = 83/98 (84%), Positives = 94/98 (95%)
 Frame = +2

Query: 2   PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
           P++T +D+GDI+LEGSRHPCVEAQDGVNFIPNDC+L R KSWFQIITGPNMGGKST+IRQ
Sbjct: 620 PDLTPSDKGDIVLEGSRHPCVEAQDGVNFIPNDCTLERGKSWFQIITGPNMGGKSTFIRQ 679

Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
           +GVN+LMAQVGCFVPCD A++SVRDCIFARVGAGDCQL
Sbjct: 680 VGVNILMAQVGCFVPCDRASVSVRDCIFARVGAGDCQL 717


>XP_008374721.1 PREDICTED: DNA mismatch repair protein MSH2 [Malus domestica]
          Length = 942

 Score =  188 bits (477), Expect = 1e-53
 Identities = 87/98 (88%), Positives = 92/98 (93%)
 Frame = +2

Query: 2   PEITSADEGDIILEGSRHPCVEAQDGVNFIPNDCSLVRSKSWFQIITGPNMGGKSTYIRQ 181
           P IT  DEGDIILEGSRHPCVEAQD VNFIPNDC LVR KSWFQIITGPNMGGKST+IRQ
Sbjct: 619 PVITPPDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSWFQIITGPNMGGKSTFIRQ 678

Query: 182 IGVNVLMAQVGCFVPCDNATISVRDCIFARVGAGDCQL 295
           +GVN+LMAQVGCFVPCD+A+ISVRDCIFARVGAGDCQL
Sbjct: 679 VGVNILMAQVGCFVPCDSASISVRDCIFARVGAGDCQL 716


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