BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00015554
         (254 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010067167.1 PREDICTED: pentatricopeptide repeat-containing pr...    54   2e-06
KNA18897.1 hypothetical protein SOVF_066290 [Spinacia oleracea]        54   2e-06
XP_017227605.1 PREDICTED: pentatricopeptide repeat-containing pr...    53   3e-06
XP_017227604.1 PREDICTED: pentatricopeptide repeat-containing pr...    53   4e-06

>XP_010067167.1 PREDICTED: pentatricopeptide repeat-containing protein At1g63400
           [Eucalyptus grandis]
          Length = 439

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 29/72 (40%), Positives = 41/72 (56%)
 Frame = -1

Query: 254 EGVAPNSTTYSILIHGFLMIRKMSDAVNLLYEATDRGIVPNFTIWNQLIRCLAAQNADWH 75
           +G+ PN  TY+ LIHG L + +M DA+ LL E T  GI PN   ++ L+ CL      W 
Sbjct: 175 KGIKPNVVTYTSLIHGLLNVGQMKDALVLLKEMTSGGIQPNIFTYSSLVHCL-CNLGQWK 233

Query: 74  QAIALKLDKVTR 39
            A  L L+K+ +
Sbjct: 234 DATVL-LEKMMK 244


>KNA18897.1 hypothetical protein SOVF_066290 [Spinacia oleracea]
          Length = 729

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 23/49 (46%), Positives = 33/49 (67%)
 Frame = -1

Query: 254 EGVAPNSTTYSILIHGFLMIRKMSDAVNLLYEATDRGIVPNFTIWNQLI 108
           +G+AP++ TY+ LIHGF   ++M DA NL  E  +RG+ PN   +N LI
Sbjct: 330 KGIAPSTYTYTALIHGFCRAKRMDDATNLFKEMVERGVYPNEVTYNVLI 378


>XP_017227605.1 PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like isoform X2 [Daucus carota subsp. sativus]
          Length = 255

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
 Frame = -1

Query: 254 EGVAPNSTTYSILIHGFLMIRKMSDAVNLLYEATDRGIVPNFTIWNQLIRCL--AAQNAD 81
           +G  PN  TY+ +I G  M  +  DA+++L E   +G  PNF ++N L+RCL  A + ++
Sbjct: 166 DGQVPNVFTYNSIIRGLCMAGRFKDALHILEEMEIKGCSPNFLVYNTLVRCLRNAGKLSE 225

Query: 80  WHQAIALKLDK 48
            H+ I + ++K
Sbjct: 226 AHKVIRIMVEK 236


>XP_017227604.1 PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like isoform X1 [Daucus carota subsp. sativus]
           KZM80886.1 hypothetical protein DCAR_031566 [Daucus
           carota subsp. sativus]
          Length = 479

 Score = 52.8 bits (125), Expect = 4e-06
 Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
 Frame = -1

Query: 254 EGVAPNSTTYSILIHGFLMIRKMSDAVNLLYEATDRGIVPNFTIWNQLIRCL--AAQNAD 81
           +G  PN  TY+ +I G  M  +  DA+++L E   +G  PNF ++N L+RCL  A + ++
Sbjct: 390 DGQVPNVFTYNSIIRGLCMAGRFKDALHILEEMEIKGCSPNFLVYNTLVRCLRNAGKLSE 449

Query: 80  WHQAIALKLDK 48
            H+ I + ++K
Sbjct: 450 AHKVIRIMVEK 460