BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00015553
         (326 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide ...   110   3e-26
5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide ...   109   5e-26
5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide ...   108   2e-25
5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide ...   108   2e-25
4PJR_A Chain A, Crystal Structure Of Designed Cppr-nre Protein        103   2e-24
4WSL_A Chain A, Crystal Structure Of Designed Cppr-polyc Protein      100   2e-23
4OZS_A Chain A, Rna Binding Protein                                    97   4e-23
JAU62594.1 Pentatricopeptide repeat-containing protein, partial ...    96   2e-22
4PJS_A Chain A, Crystal Structure Of Designed (semet)-cppr-nre P...    98   2e-22
CDX83775.1 BnaC08g18700D [Brassica napus]                             100   3e-22
XP_013746701.1 PREDICTED: putative pentatricopeptide repeat-cont...   100   3e-22
XP_013605792.1 PREDICTED: putative pentatricopeptide repeat-cont...    99   5e-22
XP_009110286.1 PREDICTED: putative pentatricopeptide repeat-cont...    99   5e-22
4PJQ_A Chain A, Crystal Structure Of Designed Cppr-polyg Protein...    96   8e-22
JAU44575.1 Pentatricopeptide repeat-containing protein, partial ...    92   1e-21
AFV61056.1 pentatricopeptide repeat-containing protein 11, parti...    97   2e-21
XP_006828912.1 PREDICTED: putative pentatricopeptide repeat-cont...    97   2e-21
AFV61035.1 pentatricopeptide repeat-containing protein 11, parti...    97   2e-21
XP_006856874.1 PREDICTED: pentatricopeptide repeat-containing pr...    97   2e-21
4WN4_A Chain A, Crystal Structure Of Designed Cppr-polya Protein...    95   2e-21

>5I9D_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U8a2 In Complex With Its Target Rna U8a2
          Length = 460

 Score =  110 bits (274), Expect = 3e-26
 Identities = 52/103 (50%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKPN  TY+TLI+GL +  K+ EAL+L +EM  +G  PNVVTY  +I
Sbjct: 209 EALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLI 268

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 269 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 311



 Score =  110 bits (274), Expect = 3e-26
 Identities = 52/103 (50%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKPN  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 244 EALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 303

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 304 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 346



 Score =  108 bits (271), Expect = 9e-26
 Identities = 51/103 (49%), Positives = 78/103 (75%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TY+TLI+GL +  K+ EAL+L +EM  +G  PNVVTY+ +I
Sbjct: 174 EALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLI 233

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P++VTYNTLI  L +  +
Sbjct: 234 DGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGK 276



 Score =  108 bits (269), Expect = 2e-25
 Identities = 51/103 (49%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 69  EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 128

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 129 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 171



 Score =  108 bits (269), Expect = 2e-25
 Identities = 51/103 (49%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 279 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 338

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 339 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 381



 Score =  107 bits (266), Expect = 5e-25
 Identities = 50/103 (48%), Positives = 78/103 (75%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY+ +I
Sbjct: 139 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLI 198

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P++VTY+TLI  L +  +
Sbjct: 199 DGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGK 241



 Score =  106 bits (264), Expect = 9e-25
 Identities = 50/103 (48%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 104 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 163

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTY+TLI  L +  +
Sbjct: 164 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGK 206



 Score =  100 bits (250), Expect = 8e-23
 Identities = 47/103 (45%), Positives = 72/103 (69%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 314 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 373

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P  +TY  ++    R  R
Sbjct: 374 DGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKR 416



 Score = 96.7 bits (239), Expect = 3e-21
 Identities = 45/102 (44%), Positives = 71/102 (69%)
 Frame = +2

Query: 8   AMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIK 187
           A+++  E+  +G+ P   TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I 
Sbjct: 35  ALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 94

Query: 188 GFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
           G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 95  GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 136



 Score = 73.6 bits (179), Expect = 5e-13
 Identities = 33/83 (39%), Positives = 54/83 (65%)
 Frame = +2

Query: 65  YNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIKGFCKSDEIDKAWKLYEIIL 244
           Y T+++ L    + + AL+L  E+  +G  P VVTY  +I G CK+ ++D+A KL+E ++
Sbjct: 19  YTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMV 78

Query: 245 QKGMLPSLVTYNTLIAKLSRGSR 313
           +KG+ P +VTYNTLI  L +  +
Sbjct: 79  EKGIKPDVVTYNTLIDGLCKAGK 101



 Score = 70.9 bits (172), Expect = 4e-12
 Identities = 31/72 (43%), Positives = 52/72 (72%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+ +TY  ++
Sbjct: 349 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVV 408

Query: 185 KGFCKSDEIDKA 220
           + +C++   ++A
Sbjct: 409 ESYCRAKRFEEA 420


>5I9G_C Chain C, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U8c2 In Complex With Its Target Rna U8c2
          Length = 460

 Score =  109 bits (273), Expect = 5e-26
 Identities = 52/103 (50%), Positives = 77/103 (74%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 139 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 198

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ PS+VTYNTLI  L +  +
Sbjct: 199 DGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGK 241



 Score =  109 bits (273), Expect = 5e-26
 Identities = 52/103 (50%), Positives = 77/103 (74%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 174 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLI 233

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ PS+VTYNTLI  L +  +
Sbjct: 234 DGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGK 276



 Score =  108 bits (269), Expect = 2e-25
 Identities = 51/103 (49%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 69  EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 128

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 129 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 171



 Score =  108 bits (269), Expect = 2e-25
 Identities = 51/103 (49%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 104 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 163

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 164 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 206



 Score =  108 bits (269), Expect = 2e-25
 Identities = 51/103 (49%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 209 EALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLI 268

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 269 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 311



 Score =  108 bits (269), Expect = 2e-25
 Identities = 51/103 (49%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 244 EALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 303

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 304 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 346



 Score =  108 bits (269), Expect = 2e-25
 Identities = 51/103 (49%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 279 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 338

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 339 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 381



 Score =  100 bits (250), Expect = 8e-23
 Identities = 47/103 (45%), Positives = 72/103 (69%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 314 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 373

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P  +TY  ++    R  R
Sbjct: 374 DGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKR 416



 Score = 96.7 bits (239), Expect = 3e-21
 Identities = 45/102 (44%), Positives = 71/102 (69%)
 Frame = +2

Query: 8   AMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIK 187
           A+++  E+  +G+ P   TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I 
Sbjct: 35  ALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 94

Query: 188 GFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
           G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 95  GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 136



 Score = 73.6 bits (179), Expect = 5e-13
 Identities = 33/83 (39%), Positives = 54/83 (65%)
 Frame = +2

Query: 65  YNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIKGFCKSDEIDKAWKLYEIIL 244
           Y T+++ L    + + AL+L  E+  +G  P VVTY  +I G CK+ ++D+A KL+E ++
Sbjct: 19  YTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMV 78

Query: 245 QKGMLPSLVTYNTLIAKLSRGSR 313
           +KG+ P +VTYNTLI  L +  +
Sbjct: 79  EKGIKPDVVTYNTLIDGLCKAGK 101



 Score = 70.9 bits (172), Expect = 4e-12
 Identities = 31/72 (43%), Positives = 52/72 (72%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+ +TY  ++
Sbjct: 349 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVV 408

Query: 185 KGFCKSDEIDKA 220
           + +C++   ++A
Sbjct: 409 ESYCRAKRFEEA 420


>5I9H_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U8g2 In Complex With Its Target Rna U8g2
          Length = 460

 Score =  108 bits (269), Expect = 2e-25
 Identities = 51/103 (49%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 69  EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 128

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 129 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 171



 Score =  108 bits (269), Expect = 2e-25
 Identities = 51/103 (49%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 244 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 303

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 304 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 346



 Score =  108 bits (269), Expect = 2e-25
 Identities = 51/103 (49%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 279 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 338

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 339 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 381



 Score =  107 bits (268), Expect = 2e-25
 Identities = 51/103 (49%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTYT +I
Sbjct: 139 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLI 198

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTY TLI  L +  +
Sbjct: 199 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGK 241



 Score =  107 bits (268), Expect = 2e-25
 Identities = 51/103 (49%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TY TLI+GL +  K+ EAL+L +EM  +G  P+VVTYT +I
Sbjct: 174 EALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLI 233

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 234 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 276



 Score =  105 bits (263), Expect = 1e-24
 Identities = 50/103 (48%), Positives = 75/103 (72%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 104 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 163

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTY TLI  L +  +
Sbjct: 164 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGK 206



 Score =  105 bits (263), Expect = 1e-24
 Identities = 50/103 (48%), Positives = 75/103 (72%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TY TLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 209 EALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 268

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 269 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 311



 Score =  100 bits (250), Expect = 8e-23
 Identities = 47/103 (45%), Positives = 72/103 (69%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 314 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 373

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P  +TY  ++    R  R
Sbjct: 374 DGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKR 416



 Score = 96.7 bits (239), Expect = 3e-21
 Identities = 45/102 (44%), Positives = 71/102 (69%)
 Frame = +2

Query: 8   AMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIK 187
           A+++  E+  +G+ P   TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I 
Sbjct: 35  ALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 94

Query: 188 GFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
           G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 95  GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 136



 Score = 73.6 bits (179), Expect = 5e-13
 Identities = 33/83 (39%), Positives = 54/83 (65%)
 Frame = +2

Query: 65  YNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIKGFCKSDEIDKAWKLYEIIL 244
           Y T+++ L    + + AL+L  E+  +G  P VVTY  +I G CK+ ++D+A KL+E ++
Sbjct: 19  YTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMV 78

Query: 245 QKGMLPSLVTYNTLIAKLSRGSR 313
           +KG+ P +VTYNTLI  L +  +
Sbjct: 79  EKGIKPDVVTYNTLIDGLCKAGK 101



 Score = 70.9 bits (172), Expect = 4e-12
 Identities = 31/72 (43%), Positives = 52/72 (72%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+ +TY  ++
Sbjct: 349 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVV 408

Query: 185 KGFCKSDEIDKA 220
           + +C++   ++A
Sbjct: 409 ESYCRAKRFEEA 420


>5I9F_A Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat
           Protein Dppr- U10 In Complex With Its Target Rna U10
          Length = 460

 Score =  108 bits (269), Expect = 2e-25
 Identities = 51/103 (49%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 69  EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 128

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 129 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 171



 Score =  108 bits (269), Expect = 2e-25
 Identities = 51/103 (49%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 104 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 163

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 164 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 206



 Score =  108 bits (269), Expect = 2e-25
 Identities = 51/103 (49%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 139 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 198

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 199 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 241



 Score =  108 bits (269), Expect = 2e-25
 Identities = 51/103 (49%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 174 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 233

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 234 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 276



 Score =  108 bits (269), Expect = 2e-25
 Identities = 51/103 (49%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 209 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 268

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 269 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 311



 Score =  108 bits (269), Expect = 2e-25
 Identities = 51/103 (49%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 244 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 303

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 304 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 346



 Score =  108 bits (269), Expect = 2e-25
 Identities = 51/103 (49%), Positives = 76/103 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 279 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 338

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 339 DGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 381



 Score =  100 bits (250), Expect = 8e-23
 Identities = 47/103 (45%), Positives = 72/103 (69%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I
Sbjct: 314 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLI 373

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK+ ++D+A KL+E +++KG+ P  +TY  ++    R  R
Sbjct: 374 DGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKR 416



 Score = 96.7 bits (239), Expect = 3e-21
 Identities = 45/102 (44%), Positives = 71/102 (69%)
 Frame = +2

Query: 8   AMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIK 187
           A+++  E+  +G+ P   TYNTLI+GL +  K+ EAL+L +EM  +G  P+VVTY  +I 
Sbjct: 35  ALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 94

Query: 188 GFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
           G CK+ ++D+A KL+E +++KG+ P +VTYNTLI  L +  +
Sbjct: 95  GLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGK 136



 Score = 73.6 bits (179), Expect = 5e-13
 Identities = 33/83 (39%), Positives = 54/83 (65%)
 Frame = +2

Query: 65  YNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIKGFCKSDEIDKAWKLYEIIL 244
           Y T+++ L    + + AL+L  E+  +G  P VVTY  +I G CK+ ++D+A KL+E ++
Sbjct: 19  YTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMV 78

Query: 245 QKGMLPSLVTYNTLIAKLSRGSR 313
           +KG+ P +VTYNTLI  L +  +
Sbjct: 79  EKGIKPDVVTYNTLIDGLCKAGK 101



 Score = 70.9 bits (172), Expect = 4e-12
 Identities = 31/72 (43%), Positives = 52/72 (72%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+ EEM+ +GIKP+  TYNTLI+GL +  K+ EAL+L +EM  +G  P+ +TY  ++
Sbjct: 349 EALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVV 408

Query: 185 KGFCKSDEIDKA 220
           + +C++   ++A
Sbjct: 409 ESYCRAKRFEEA 420


>4PJR_A Chain A, Crystal Structure Of Designed Cppr-nre Protein
          Length = 303

 Score =  103 bits (256), Expect = 2e-24
 Identities = 49/103 (47%), Positives = 78/103 (75%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EEM  +GI PN  TYNTLI+GL +  +++EAL+L +EM+ +G VP+VVTYT +I
Sbjct: 126 EALELFEEMKEKGIVPNVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLI 185

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E + +KG++P++VTYNTLI+ L +  R
Sbjct: 186 SGLGKAGRLEEALELFEEMKEKGIVPNVVTYNTLISGLGKAGR 228



 Score =  101 bits (252), Expect = 7e-24
 Identities = 49/105 (46%), Positives = 78/105 (74%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EEM  +GI PN  TYNTLI+GL +  +++EAL+L +EM+ +G VP+VVTYT +I
Sbjct: 196 EALELFEEMKEKGIVPNVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLI 255

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSRDR 319
            G  K+  +++A +L+E + +KG++P++VTYNTLI+ L +    R
Sbjct: 256 SGLGKAGRLEEALELFEEMKEKGIVPNVVTYNTLISGLGKAGCGR 300



 Score =  101 bits (251), Expect = 1e-23
 Identities = 48/103 (46%), Positives = 78/103 (75%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EEM  +GI P+  TYNTLI+GL +  +++EAL+L +EM+ +G VP+VVTYT +I
Sbjct: 56  EALELFEEMKEKGIVPDVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLI 115

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E + +KG++P++VTYNTLI+ L +  R
Sbjct: 116 SGLGKAGRLEEALELFEEMKEKGIVPNVVTYNTLISGLGKAGR 158



 Score = 96.3 bits (238), Expect = 8e-22
 Identities = 46/103 (44%), Positives = 74/103 (71%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EEM  +GI P+  TY TLI+GL +  +++EAL+L +EM+ +G VPNVVTY  +I
Sbjct: 91  EALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPNVVTYNTLI 150

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E + +KG++P +VTY TLI+ L +  R
Sbjct: 151 SGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGR 193



 Score = 96.3 bits (238), Expect = 8e-22
 Identities = 46/103 (44%), Positives = 74/103 (71%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EEM  +GI P+  TY TLI+GL +  +++EAL+L +EM+ +G VPNVVTY  +I
Sbjct: 161 EALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPNVVTYNTLI 220

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E + +KG++P +VTY TLI+ L +  R
Sbjct: 221 SGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGR 263



 Score = 94.4 bits (233), Expect = 4e-21
 Identities = 45/103 (43%), Positives = 74/103 (71%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EEM  +GI P+  TY TLI+GL +  +++EAL+L +EM+ +G VP+VVTY  +I
Sbjct: 21  EALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYNTLI 80

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E + +KG++P +VTY TLI+ L +  R
Sbjct: 81  SGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGR 123



 Score = 89.0 bits (219), Expect = 5e-19
 Identities = 41/87 (47%), Positives = 65/87 (74%)
 Frame = +2

Query: 53  NEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIKGFCKSDEIDKAWKLY 232
           N  TYNTLI+GL +  +++EAL+L +EM+ +G VP+VVTYT +I G  K+  +++A +L+
Sbjct: 2   NSVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELF 61

Query: 233 EIILQKGMLPSLVTYNTLIAKLSRGSR 313
           E + +KG++P +VTYNTLI+ L +  R
Sbjct: 62  EEMKEKGIVPDVVTYNTLISGLGKAGR 88


>4WSL_A Chain A, Crystal Structure Of Designed Cppr-polyc Protein
          Length = 303

 Score =  100 bits (249), Expect = 2e-23
 Identities = 48/103 (46%), Positives = 77/103 (74%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EEM  +GI P+  TYNTLI+GL +  +++EAL+L +EM+ +G VP+VVTY  +I
Sbjct: 21  EALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLI 80

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E + +KG++PS+VTYNTLI+ L +  R
Sbjct: 81  SGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGR 123



 Score =  100 bits (249), Expect = 2e-23
 Identities = 48/103 (46%), Positives = 77/103 (74%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EEM  +GI P+  TYNTLI+GL +  +++EAL+L +EM+ +G VP+VVTY  +I
Sbjct: 56  EALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLI 115

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E + +KG++PS+VTYNTLI+ L +  R
Sbjct: 116 SGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGR 158



 Score =  100 bits (249), Expect = 2e-23
 Identities = 48/103 (46%), Positives = 77/103 (74%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EEM  +GI P+  TYNTLI+GL +  +++EAL+L +EM+ +G VP+VVTY  +I
Sbjct: 91  EALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLI 150

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E + +KG++PS+VTYNTLI+ L +  R
Sbjct: 151 SGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGR 193



 Score =  100 bits (249), Expect = 2e-23
 Identities = 48/103 (46%), Positives = 77/103 (74%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EEM  +GI P+  TYNTLI+GL +  +++EAL+L +EM+ +G VP+VVTY  +I
Sbjct: 126 EALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLI 185

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E + +KG++PS+VTYNTLI+ L +  R
Sbjct: 186 SGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGR 228



 Score =  100 bits (249), Expect = 2e-23
 Identities = 48/103 (46%), Positives = 77/103 (74%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EEM  +GI P+  TYNTLI+GL +  +++EAL+L +EM+ +G VP+VVTY  +I
Sbjct: 161 EALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLI 220

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E + +KG++PS+VTYNTLI+ L +  R
Sbjct: 221 SGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGR 263



 Score = 99.0 bits (245), Expect = 8e-23
 Identities = 48/105 (45%), Positives = 77/105 (73%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EEM  +GI P+  TYNTLI+GL +  +++EAL+L +EM+ +G VP+VVTY  +I
Sbjct: 196 EALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLI 255

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSRDR 319
            G  K+  +++A +L+E + +KG++PS+VTYNTLI+ L +    R
Sbjct: 256 SGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGCGR 300



 Score = 88.6 bits (218), Expect = 7e-19
 Identities = 41/87 (47%), Positives = 65/87 (74%)
 Frame = +2

Query: 53  NEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIKGFCKSDEIDKAWKLY 232
           N  TYNTLI+GL +  +++EAL+L +EM+ +G VP+VVTY  +I G  K+  +++A +L+
Sbjct: 2   NSVTYNTLISGLGKAGRLEEALELFEEMKEKGIVPSVVTYNTLISGLGKAGRLEEALELF 61

Query: 233 EIILQKGMLPSLVTYNTLIAKLSRGSR 313
           E + +KG++PS+VTYNTLI+ L +  R
Sbjct: 62  EEMKEKGIVPSVVTYNTLISGLGKAGR 88


>4OZS_A Chain A, Rna Binding Protein
          Length = 175

 Score = 96.7 bits (239), Expect = 4e-23
 Identities = 45/103 (43%), Positives = 74/103 (71%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ +EM  +G+KP+  TYNTLI+GL +  +++EALQL  EM+ +G  P+VVTY  +I
Sbjct: 20  EALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLI 79

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L++ + +KG+ P +VTYNTLI  L++  R
Sbjct: 80  DGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGR 122



 Score = 96.7 bits (239), Expect = 4e-23
 Identities = 45/103 (43%), Positives = 74/103 (71%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ +EM  +G+KP+  TYNTLI+GL +  +++EALQL  EM+ +G  P+VVTY  +I
Sbjct: 55  EALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLI 114

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L++ + +KG+ P +VTYNTLI  L++  R
Sbjct: 115 DGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGR 157



 Score = 81.6 bits (200), Expect = 3e-17
 Identities = 38/84 (45%), Positives = 60/84 (71%)
 Frame = +2

Query: 62  TYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIKGFCKSDEIDKAWKLYEII 241
           TYNTLI+GL +  +++EALQL  EM+ +G  P+VVTY  +I G  K+  +++A +L++ +
Sbjct: 4   TYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEM 63

Query: 242 LQKGMLPSLVTYNTLIAKLSRGSR 313
            +KG+ P +VTYNTLI  L++  R
Sbjct: 64  KEKGVKPDVVTYNTLIDGLAKAGR 87



 Score = 79.7 bits (195), Expect = 2e-16
 Identities = 36/86 (41%), Positives = 62/86 (72%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ +EM  +G+KP+  TYNTLI+GL +  +++EALQL  EM+ +G  P+VVTY  +I
Sbjct: 90  EALQLFQEMKEKGVKPDVVTYNTLIDGLAKAGRLEEALQLFQEMKEKGVKPDVVTYNTLI 149

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLP 262
            G  K+  +++A +L++ + +KG+ P
Sbjct: 150 DGLAKAGRLEEALQLFQEMKEKGVKP 175


>JAU62594.1 Pentatricopeptide repeat-containing protein, partial [Noccaea
           caerulescens]
          Length = 188

 Score = 95.5 bits (236), Expect = 2e-22
 Identities = 45/95 (47%), Positives = 64/95 (67%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA K+ EEMI   I PN  TYN+LING   ++++ EA Q+ D M  +G +PNVVTY+ +I
Sbjct: 86  EAEKLYEEMISRSIDPNTITYNSLINGFCRQSRLHEAKQMFDLMVSKGCLPNVVTYSTLI 145

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLI 289
            GFCK  +++   KL+  + Q+G+  + VTYNTLI
Sbjct: 146 NGFCKHKKVEDGMKLFREMSQRGLAGNTVTYNTLI 180



 Score = 83.2 bits (204), Expect = 1e-17
 Identities = 37/95 (38%), Positives = 62/95 (65%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           +A ++  +MI   I PN  T N LI+  ++E K+ EA +L +EM  R   PN +TY  +I
Sbjct: 51  DASRLLSDMIKRKINPNVVTVNALIDAFVKEGKLWEAEKLYEEMISRSIDPNTITYNSLI 110

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLI 289
            GFC+   + +A +++++++ KG LP++VTY+TLI
Sbjct: 111 NGFCRQSRLHEAKQMFDLMVSKGCLPNVVTYSTLI 145



 Score = 70.1 bits (170), Expect = 1e-12
 Identities = 37/103 (35%), Positives = 63/103 (61%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           +A+ +  EM  +GI+P+  TY++LI+ L +  +  +A +L+ +M  R   PNVVT   +I
Sbjct: 16  DALNLFSEMENKGIRPDVVTYSSLISCLCKHGRWSDASRLLSDMIKRKINPNVVTVNALI 75

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
             F K  ++ +A KLYE ++ + + P+ +TYN+LI    R SR
Sbjct: 76  DAFVKEGKLWEAEKLYEEMISRSIDPNTITYNSLINGFCRQSR 118



 Score = 60.1 bits (144), Expect = 8e-09
 Identities = 27/68 (39%), Positives = 43/68 (63%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA +M + M+ +G  PN  TY+TLING  +  K+++ ++L  EM  RG   N VTY  +I
Sbjct: 121 EAKQMFDLMVSKGCLPNVVTYSTLINGFCKHKKVEDGMKLFREMSQRGLAGNTVTYNTLI 180

Query: 185 KGFCKSDE 208
           +GF ++ +
Sbjct: 181 QGFFQAGD 188



 Score = 55.8 bits (133), Expect = 3e-07
 Identities = 29/75 (38%), Positives = 45/75 (60%)
 Frame = +2

Query: 65  YNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIKGFCKSDEIDKAWKLYEIIL 244
           YNT+I+GL +     +AL L  EME +G  P+VVTY+ +I   CK      A +L   ++
Sbjct: 1   YNTIIDGLCKYKHPDDALNLFSEMENKGIRPDVVTYSSLISCLCKHGRWSDASRLLSDMI 60

Query: 245 QKGMLPSLVTYNTLI 289
           ++ + P++VT N LI
Sbjct: 61  KRKINPNVVTVNALI 75


>4PJS_A Chain A, Crystal Structure Of Designed (semet)-cppr-nre Protein
          Length = 303

 Score = 97.8 bits (242), Expect = 2e-22
 Identities = 47/103 (45%), Positives = 75/103 (72%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EE   +GI PN  TYNTLI+GL +  +++EAL+L +E + +G VP+VVTYT +I
Sbjct: 126 EALELFEEXKEKGIVPNVVTYNTLISGLGKAGRLEEALELFEEXKEKGIVPDVVTYTTLI 185

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E   +KG++P++VTYNTLI+ L +  R
Sbjct: 186 SGLGKAGRLEEALELFEEXKEKGIVPNVVTYNTLISGLGKAGR 228



 Score = 96.3 bits (238), Expect = 8e-22
 Identities = 47/105 (44%), Positives = 75/105 (71%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EE   +GI PN  TYNTLI+GL +  +++EAL+L +E + +G VP+VVTYT +I
Sbjct: 196 EALELFEEXKEKGIVPNVVTYNTLISGLGKAGRLEEALELFEEXKEKGIVPDVVTYTTLI 255

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSRDR 319
            G  K+  +++A +L+E   +KG++P++VTYNTLI+ L +    R
Sbjct: 256 SGLGKAGRLEEALELFEEXKEKGIVPNVVTYNTLISGLGKAGCGR 300



 Score = 95.9 bits (237), Expect = 1e-21
 Identities = 46/103 (44%), Positives = 75/103 (72%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EE   +GI P+  TYNTLI+GL +  +++EAL+L +E + +G VP+VVTYT +I
Sbjct: 56  EALELFEEXKEKGIVPDVVTYNTLISGLGKAGRLEEALELFEEXKEKGIVPDVVTYTTLI 115

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E   +KG++P++VTYNTLI+ L +  R
Sbjct: 116 SGLGKAGRLEEALELFEEXKEKGIVPNVVTYNTLISGLGKAGR 158



 Score = 90.9 bits (224), Expect = 9e-20
 Identities = 44/103 (42%), Positives = 71/103 (68%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EE   +GI P+  TY TLI+GL +  +++EAL+L +E + +G VPNVVTY  +I
Sbjct: 91  EALELFEEXKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEXKEKGIVPNVVTYNTLI 150

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E   +KG++P +VTY TLI+ L +  R
Sbjct: 151 SGLGKAGRLEEALELFEEXKEKGIVPDVVTYTTLISGLGKAGR 193



 Score = 90.9 bits (224), Expect = 9e-20
 Identities = 44/103 (42%), Positives = 71/103 (68%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EE   +GI P+  TY TLI+GL +  +++EAL+L +E + +G VPNVVTY  +I
Sbjct: 161 EALELFEEXKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEXKEKGIVPNVVTYNTLI 220

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E   +KG++P +VTY TLI+ L +  R
Sbjct: 221 SGLGKAGRLEEALELFEEXKEKGIVPDVVTYTTLISGLGKAGR 263



 Score = 89.0 bits (219), Expect = 5e-19
 Identities = 43/103 (41%), Positives = 71/103 (68%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EE   +GI P+  TY TLI+GL +  +++EAL+L +E + +G VP+VVTY  +I
Sbjct: 21  EALELFEEXKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEXKEKGIVPDVVTYNTLI 80

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E   +KG++P +VTY TLI+ L +  R
Sbjct: 81  SGLGKAGRLEEALELFEEXKEKGIVPDVVTYTTLISGLGKAGR 123



 Score = 85.9 bits (211), Expect = 7e-18
 Identities = 40/87 (45%), Positives = 63/87 (72%)
 Frame = +2

Query: 53  NEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIKGFCKSDEIDKAWKLY 232
           N  TYNTLI+GL +  +++EAL+L +E + +G VP+VVTYT +I G  K+  +++A +L+
Sbjct: 2   NSVTYNTLISGLGKAGRLEEALELFEEXKEKGIVPDVVTYTTLISGLGKAGRLEEALELF 61

Query: 233 EIILQKGMLPSLVTYNTLIAKLSRGSR 313
           E   +KG++P +VTYNTLI+ L +  R
Sbjct: 62  EEXKEKGIVPDVVTYNTLISGLGKAGR 88


>CDX83775.1 BnaC08g18700D [Brassica napus]
          Length = 851

 Score = 99.8 bits (247), Expect = 3e-22
 Identities = 49/104 (47%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
 Frame = +2

Query: 5    EAMKMCEEMIM-EGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIM 181
            EA K+  E+I+ EG  P+E+TY  LI+G   + +I EA  L DEM ++G  PNVVTY  +
Sbjct: 689  EARKLFSELILREGFTPDEYTYTILIHGCAVDGEINEAFNLRDEMSVKGITPNVVTYNAL 748

Query: 182  IKGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            IKG CKS  +D+A +L   + QKG+ P+ +TYNTLI  L +  R
Sbjct: 749  IKGLCKSGNVDRAQRLLRKLPQKGITPNAITYNTLIDGLMKSGR 792



 Score = 70.5 bits (171), Expect = 6e-12
 Identities = 31/85 (36%), Positives = 53/85 (62%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA  + +EM ++GI PN  TYN LI GL +   +  A +L+ ++  +G  PN +TY  +I
Sbjct: 725 EAFNLRDEMSVKGITPNVVTYNALIKGLCKSGNVDRAQRLLRKLPQKGITPNAITYNTLI 784

Query: 185 KGFCKSDEIDKAWKLYEIILQKGML 259
            G  KS  +D+A +L + +++KG++
Sbjct: 785 DGLMKSGRLDEAMRLKDKMIEKGLV 809



 Score = 62.8 bits (151), Expect = 3e-09
 Identities = 29/100 (29%), Positives = 63/100 (63%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           +A+++  +M+ +G++ N    N+LING  +  ++ EA    + M +R   P+  TY  ++
Sbjct: 307 DAVRVHHDMLRKGVRTNATIVNSLINGYCKSGELVEA----ERMFMRMKDPDHYTYNTLV 362

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSR 304
            G+C++  +++A KL + + +K ++P+++TYNTL+   +R
Sbjct: 363 DGYCRAGRVNEALKLCDRMCEKEVVPTVMTYNTLLKGFTR 402



 Score = 60.8 bits (146), Expect = 1e-08
 Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 37/131 (28%)
 Frame = +2

Query: 23  EEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIKGFC-- 196
           E M M    P+ +TYNTL++G     ++ EAL+L D M  +  VP V+TY  ++KGF   
Sbjct: 344 ERMFMRMKDPDHYTYNTLVDGYCRAGRVNEALKLCDRMCEKEVVPTVMTYNTLLKGFTRV 403

Query: 197 -----------------------------------KSDEIDKAWKLYEIILQKGMLPSLV 271
                                              K  + D+A KL+E +L +G+L   V
Sbjct: 404 GAYHDVVSLWKTMIKRGVSGNEISCSTLLEACALFKLGDFDEAMKLWENVLARGLLTDTV 463

Query: 272 TYNTLIAKLSR 304
           T N +I+ L +
Sbjct: 464 TLNVMISGLCK 474



 Score = 58.9 bits (141), Expect = 7e-08
 Identities = 29/96 (30%), Positives = 55/96 (57%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EAMK+ E ++  G+  +  T N +I+GL +  K+ +A +++D ++     P+V TY  + 
Sbjct: 445 EAMKLWENVLARGLLTDTVTLNVMISGLCKMEKVNKAKEILDSVKTFRCKPDVQTYQALS 504

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIA 292
            G+ K     +A+ + + +   GM P++  YNTLI+
Sbjct: 505 HGYYKVGNFKEAFGVKDHMESNGMFPTVEMYNTLIS 540


>XP_013746701.1 PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g19290 [Brassica napus] XP_013728091.1 PREDICTED:
            putative pentatricopeptide repeat-containing protein
            At1g19290 [Brassica napus]
          Length = 887

 Score = 99.8 bits (247), Expect = 3e-22
 Identities = 49/104 (47%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
 Frame = +2

Query: 5    EAMKMCEEMIM-EGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIM 181
            EA K+  E+I+ EG  P+E+TY  LI+G   + +I EA  L DEM ++G  PNVVTY  +
Sbjct: 725  EARKLFSELILREGFTPDEYTYTILIHGCAVDGEINEAFNLRDEMSVKGITPNVVTYNAL 784

Query: 182  IKGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            IKG CKS  +D+A +L   + QKG+ P+ +TYNTLI  L +  R
Sbjct: 785  IKGLCKSGNVDRAQRLLRKLPQKGITPNAITYNTLIDGLMKSGR 828



 Score = 70.5 bits (171), Expect = 6e-12
 Identities = 31/85 (36%), Positives = 53/85 (62%)
 Frame = +2

Query: 5    EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
            EA  + +EM ++GI PN  TYN LI GL +   +  A +L+ ++  +G  PN +TY  +I
Sbjct: 761  EAFNLRDEMSVKGITPNVVTYNALIKGLCKSGNVDRAQRLLRKLPQKGITPNAITYNTLI 820

Query: 185  KGFCKSDEIDKAWKLYEIILQKGML 259
             G  KS  +D+A +L + +++KG++
Sbjct: 821  DGLMKSGRLDEAMRLKDKMIEKGLV 845



 Score = 62.8 bits (151), Expect = 3e-09
 Identities = 29/100 (29%), Positives = 63/100 (63%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           +A+++  +M+ +G++ N    N+LING  +  ++ EA    + M +R   P+  TY  ++
Sbjct: 345 DAVRVHHDMLRKGVRTNATIVNSLINGYCKSGELVEA----ERMFMRMKDPDHYTYNTLV 400

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSR 304
            G+C++  +++A KL + + +K ++P+++TYNTL+   +R
Sbjct: 401 DGYCRAGRVNEALKLCDRMCEKEVVPTVMTYNTLLKGFTR 440



 Score = 62.8 bits (151), Expect = 3e-09
 Identities = 31/100 (31%), Positives = 54/100 (54%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+C+ M  + + P   TYNTL+ G        + + L   M  RG   N ++ + ++
Sbjct: 411 EALKLCDRMCEKEVVPTVMTYNTLLKGFTRVGAYHDVVSLWKTMIKRGVSGNEISCSTLL 470

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSR 304
           +   K  + D+A KL+E +L +G+L   VT N +I+ L +
Sbjct: 471 EALFKLGDFDEAMKLWENVLARGLLTDTVTLNVMISGLCK 510



 Score = 58.9 bits (141), Expect = 7e-08
 Identities = 29/96 (30%), Positives = 55/96 (57%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EAMK+ E ++  G+  +  T N +I+GL +  K+ +A +++D ++     P+V TY  + 
Sbjct: 481 EAMKLWENVLARGLLTDTVTLNVMISGLCKMEKVNKAKEILDSVKTFRCKPDVQTYQALS 540

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIA 292
            G+ K     +A+ + + +   GM P++  YNTLI+
Sbjct: 541 HGYYKVGNFKEAFGVKDHMESNGMFPTVEMYNTLIS 576



 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 26/94 (27%), Positives = 51/94 (54%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           + + + + MI  G+  NE + +TL+  L +     EA++L + +  RG + + VT  +MI
Sbjct: 446 DVVSLWKTMIKRGVSGNEISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTVTLNVMI 505

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTL 286
            G CK ++++KA ++ + +      P + TY  L
Sbjct: 506 SGLCKMEKVNKAKEILDSVKTFRCKPDVQTYQAL 539


>XP_013605792.1 PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g19290 [Brassica oleracea var. oleracea]
          Length = 885

 Score = 99.4 bits (246), Expect = 5e-22
 Identities = 48/104 (46%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
 Frame = +2

Query: 5    EAMKMCEEMIM-EGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIM 181
            EA K+  E+I+ EG  P+E+TY  LI+G   + +I EA  L DEM ++G  PNV+TY  +
Sbjct: 725  EARKLFSELILREGFTPDEYTYTILIHGCAVDGEINEAFNLRDEMSVKGITPNVITYNAL 784

Query: 182  IKGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            IKG CKS  +D+A +L   + QKG+ P+ +TYNTLI  L +  R
Sbjct: 785  IKGLCKSGNVDRAQRLLRKLPQKGITPNAITYNTLIDGLMKSGR 828



 Score = 70.9 bits (172), Expect = 4e-12
 Identities = 31/85 (36%), Positives = 53/85 (62%)
 Frame = +2

Query: 5    EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
            EA  + +EM ++GI PN  TYN LI GL +   +  A +L+ ++  +G  PN +TY  +I
Sbjct: 761  EAFNLRDEMSVKGITPNVITYNALIKGLCKSGNVDRAQRLLRKLPQKGITPNAITYNTLI 820

Query: 185  KGFCKSDEIDKAWKLYEIILQKGML 259
             G  KS  +D+A +L + +++KG++
Sbjct: 821  DGLMKSGRLDEAMRLKDKMIEKGLV 845



 Score = 62.8 bits (151), Expect = 3e-09
 Identities = 29/100 (29%), Positives = 64/100 (64%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           +A+++ ++M+ +G++ N    N+LING  +  ++ EA    + M +R   P+  TY  ++
Sbjct: 345 DAVRVHDDMLRKGVRTNATICNSLINGYCKAGELVEA----ERMFMRMKDPDHYTYNTLV 400

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSR 304
            G+C++  +++A KL + + +K ++P+++TYNTL+   +R
Sbjct: 401 DGYCRAGRVNEALKLCDRMCEKEVVPTVMTYNTLLKGFTR 440



 Score = 62.8 bits (151), Expect = 3e-09
 Identities = 31/100 (31%), Positives = 54/100 (54%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+K+C+ M  + + P   TYNTL+ G        + + L   M  RG   N ++ + ++
Sbjct: 411 EALKLCDRMCEKEVVPTVMTYNTLLKGFTRVGAYHDVVSLWKTMIKRGVSGNEISCSTLL 470

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSR 304
           +   K  + D+A KL+E +L +G+L   VT N +I+ L +
Sbjct: 471 EALFKLGDFDEAMKLWENVLARGLLTDTVTLNVMISGLCK 510



 Score = 58.9 bits (141), Expect = 7e-08
 Identities = 29/96 (30%), Positives = 55/96 (57%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EAMK+ E ++  G+  +  T N +I+GL +  K+ +A +++D ++     P+V TY  + 
Sbjct: 481 EAMKLWENVLARGLLTDTVTLNVMISGLCKMEKVNKAKEILDSVKTFRCKPDVQTYQALS 540

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIA 292
            G+ K     +A+ + + +   GM P++  YNTLI+
Sbjct: 541 HGYYKVGNFKEAFGVKDHMESNGMFPTVEMYNTLIS 576



 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 26/94 (27%), Positives = 51/94 (54%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           + + + + MI  G+  NE + +TL+  L +     EA++L + +  RG + + VT  +MI
Sbjct: 446 DVVSLWKTMIKRGVSGNEISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTVTLNVMI 505

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTL 286
            G CK ++++KA ++ + +      P + TY  L
Sbjct: 506 SGLCKMEKVNKAKEILDSVKTFRCKPDVQTYQAL 539


>XP_009110286.1 PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g19290 [Brassica rapa]
          Length = 885

 Score = 99.4 bits (246), Expect = 5e-22
 Identities = 48/104 (46%), Positives = 69/104 (66%), Gaps = 1/104 (0%)
 Frame = +2

Query: 5    EAMKMCEEMIM-EGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIM 181
            EA K+  E+I+ EG  P+E+TY  LI+G   + +I EA +L DEM ++G  PNVVTY  +
Sbjct: 725  EARKLFSELILREGFTPDEYTYTILIHGCAVDGEINEAFKLRDEMSVKGITPNVVTYNAL 784

Query: 182  IKGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            IKG CKS  +D+A +L   + QKG+ P+ +TYNTL+  L +  R
Sbjct: 785  IKGLCKSGNLDRAQRLLRKLPQKGITPNAITYNTLVDGLMKSGR 828



 Score = 73.2 bits (178), Expect = 7e-13
 Identities = 40/109 (36%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
 Frame = +2

Query: 5    EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELR-GFVPNVVTYTIM 181
            +  ++ + +  + + P+   YN  + GL +  K+KEA +L  E+ LR GF P+  TYTI+
Sbjct: 690  KTQRIADSLTKKLLVPSNIVYNVALAGLCKAGKVKEARKLFSELILREGFTPDEYTYTIL 749

Query: 182  IKGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSR-GSRDRTK 325
            I G     EI++A+KL + +  KG+ P++VTYN LI  L + G+ DR +
Sbjct: 750  IHGCAVDGEINEAFKLRDEMSVKGITPNVVTYNALIKGLCKSGNLDRAQ 798



 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 31/85 (36%), Positives = 54/85 (63%)
 Frame = +2

Query: 5    EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
            EA K+ +EM ++GI PN  TYN LI GL +   +  A +L+ ++  +G  PN +TY  ++
Sbjct: 761  EAFKLRDEMSVKGITPNVVTYNALIKGLCKSGNLDRAQRLLRKLPQKGITPNAITYNTLV 820

Query: 185  KGFCKSDEIDKAWKLYEIILQKGML 259
             G  KS  +D+A +L + +++KG++
Sbjct: 821  DGLMKSGRLDEAMRLKDKMIEKGLV 845



 Score = 63.5 bits (153), Expect = 2e-09
 Identities = 39/129 (30%), Positives = 58/129 (44%), Gaps = 35/129 (27%)
 Frame = +2

Query: 23  EEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIKGFC-- 196
           E M M    P+ +TYNTL++G     ++ EAL L D M  +  VP V+TY I++KGF   
Sbjct: 382 ERMFMRMKDPDHYTYNTLVDGYCRAGRVNEALNLCDRMCEKDVVPTVMTYNILLKGFTRV 441

Query: 197 ---------------------------------KSDEIDKAWKLYEIILQKGMLPSLVTY 277
                                            K  + D+A KL+E +L +G+L   VT 
Sbjct: 442 GAYHDVVSLWKTMVKRGVSGNEISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTVTL 501

Query: 278 NTLIAKLSR 304
           N +I+ L +
Sbjct: 502 NVMISGLCK 510



 Score = 62.8 bits (151), Expect = 3e-09
 Identities = 30/96 (31%), Positives = 58/96 (60%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EAMK+ E ++  G+  +  T N +I+GL +  K+ +A +++D ++     P+V TY  + 
Sbjct: 481 EAMKLWENVLARGLLTDTVTLNVMISGLCKMEKVNKAKEILDSVKTFRCKPDVQTYQALS 540

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIA 292
            G+ K  +  +A+ + + + +KGM P++  YNTLI+
Sbjct: 541 HGYYKVGDFKEAFGVKDSMERKGMFPTIEMYNTLIS 576



 Score = 58.5 bits (140), Expect = 9e-08
 Identities = 28/100 (28%), Positives = 61/100 (61%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           +A+++ + MI +G++ N    N+LING  +  ++ EA    + M +R   P+  TY  ++
Sbjct: 345 DAVRVHDGMIRKGVRTNATICNSLINGYCKSGELVEA----ERMFMRMKDPDHYTYNTLV 400

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSR 304
            G+C++  +++A  L + + +K ++P+++TYN L+   +R
Sbjct: 401 DGYCRAGRVNEALNLCDRMCEKDVVPTVMTYNILLKGFTR 440



 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 25/94 (26%), Positives = 51/94 (54%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           + + + + M+  G+  NE + +TL+  L +     EA++L + +  RG + + VT  +MI
Sbjct: 446 DVVSLWKTMVKRGVSGNEISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTVTLNVMI 505

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTL 286
            G CK ++++KA ++ + +      P + TY  L
Sbjct: 506 SGLCKMEKVNKAKEILDSVKTFRCKPDVQTYQAL 539


>4PJQ_A Chain A, Crystal Structure Of Designed Cppr-polyg Protein 4PJQ_B
           Chain B, Crystal Structure Of Designed Cppr-polyg
           Protein
          Length = 303

 Score = 96.3 bits (238), Expect = 8e-22
 Identities = 46/103 (44%), Positives = 75/103 (72%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EEM  +GI P+  TY TLI+GL +  +++EAL+L +EM+ +G VP+VVTYT +I
Sbjct: 21  EALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLI 80

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E + +KG++P +VTY TLI+ L +  R
Sbjct: 81  SGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGR 123



 Score = 96.3 bits (238), Expect = 8e-22
 Identities = 46/103 (44%), Positives = 75/103 (72%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EEM  +GI P+  TY TLI+GL +  +++EAL+L +EM+ +G VP+VVTYT +I
Sbjct: 56  EALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLI 115

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E + +KG++P +VTY TLI+ L +  R
Sbjct: 116 SGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGR 158



 Score = 96.3 bits (238), Expect = 8e-22
 Identities = 46/103 (44%), Positives = 75/103 (72%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EEM  +GI P+  TY TLI+GL +  +++EAL+L +EM+ +G VP+VVTYT +I
Sbjct: 91  EALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLI 150

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E + +KG++P +VTY TLI+ L +  R
Sbjct: 151 SGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGR 193



 Score = 96.3 bits (238), Expect = 8e-22
 Identities = 46/103 (44%), Positives = 75/103 (72%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EEM  +GI P+  TY TLI+GL +  +++EAL+L +EM+ +G VP+VVTYT +I
Sbjct: 126 EALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLI 185

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E + +KG++P +VTY TLI+ L +  R
Sbjct: 186 SGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGR 228



 Score = 96.3 bits (238), Expect = 8e-22
 Identities = 46/103 (44%), Positives = 75/103 (72%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EEM  +GI P+  TY TLI+GL +  +++EAL+L +EM+ +G VP+VVTYT +I
Sbjct: 161 EALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLI 220

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E + +KG++P +VTY TLI+ L +  R
Sbjct: 221 SGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGR 263



 Score = 94.7 bits (234), Expect = 3e-21
 Identities = 46/105 (43%), Positives = 75/105 (71%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EEM  +GI P+  TY TLI+GL +  +++EAL+L +EM+ +G VP+VVTYT +I
Sbjct: 196 EALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLI 255

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSRDR 319
            G  K+  +++A +L+E + +KG++P +VTY TLI+ L +    R
Sbjct: 256 SGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGCGR 300



 Score = 84.3 bits (207), Expect = 3e-17
 Identities = 39/87 (44%), Positives = 63/87 (72%)
 Frame = +2

Query: 53  NEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIKGFCKSDEIDKAWKLY 232
           N  TY TLI+GL +  +++EAL+L +EM+ +G VP+VVTYT +I G  K+  +++A +L+
Sbjct: 2   NSVTYTTLISGLGKAGRLEEALELFEEMKEKGIVPDVVTYTTLISGLGKAGRLEEALELF 61

Query: 233 EIILQKGMLPSLVTYNTLIAKLSRGSR 313
           E + +KG++P +VTY TLI+ L +  R
Sbjct: 62  EEMKEKGIVPDVVTYTTLISGLGKAGR 88


>JAU44575.1 Pentatricopeptide repeat-containing protein, partial [Noccaea
           caerulescens]
          Length = 146

 Score = 92.0 bits (227), Expect = 1e-21
 Identities = 42/95 (44%), Positives = 62/95 (65%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA K+CEEMI   I P+  TYN+LING   ++++ EA Q+ D M   G +PNVVTY  +I
Sbjct: 18  EAEKLCEEMIKRSIDPSTITYNSLINGFCMQSRLDEAKQMFDLMVSNGCLPNVVTYNTLI 77

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLI 289
            GFCK+  ++   +L+  + Q+G++   VTY T+I
Sbjct: 78  NGFCKTKRVEDGMELFHEMSQRGLVGDTVTYTTMI 112



 Score = 77.8 bits (190), Expect = 5e-16
 Identities = 37/94 (39%), Positives = 59/94 (62%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA +M + M+  G  PN  TYNTLING  +  ++++ ++L  EM  RG V + VTYT MI
Sbjct: 53  EAKQMFDLMVSNGCLPNVVTYNTLINGFCKTKRVEDGMELFHEMSQRGLVGDTVTYTTMI 112

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTL 286
           +GF ++ + D A  +++ ++  G+ P + TYN L
Sbjct: 113 QGFFQARDCDNAQGVFKQMVSCGVSPDIWTYNIL 146



 Score = 71.2 bits (173), Expect = 2e-13
 Identities = 30/76 (39%), Positives = 52/76 (68%)
 Frame = +2

Query: 62  TYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIKGFCKSDEIDKAWKLYEII 241
           T++ LI+  ++E K+ EA +L +EM  R   P+ +TY  +I GFC    +D+A ++++++
Sbjct: 2   TFSALIDAFVKEGKLLEAEKLCEEMIKRSIDPSTITYNSLINGFCMQSRLDEAKQMFDLM 61

Query: 242 LQKGMLPSLVTYNTLI 289
           +  G LP++VTYNTLI
Sbjct: 62  VSNGCLPNVVTYNTLI 77


>AFV61056.1 pentatricopeptide repeat-containing protein 11, partial [Nashia
           inaguensis]
          Length = 431

 Score = 97.1 bits (240), Expect = 2e-21
 Identities = 42/100 (42%), Positives = 70/100 (70%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           E  ++   M+  G++P+ +TY+ LINGL +E+K+ +A +L DEM ++G +PN VT+T +I
Sbjct: 195 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLI 254

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSR 304
            G CK+  +D A ++Y+ +L + +LP L+TYNTLI  L +
Sbjct: 255 XGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCK 294



 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 38/102 (37%), Positives = 62/102 (60%)
 Frame = +2

Query: 8   AMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIK 187
           AM++ + M+ + + P+  TYNTLI GL ++  +K+A  LIDEM ++G  P+  TYT +I 
Sbjct: 266 AMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLID 325

Query: 188 GFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
           G CK  ++D A+K  + ++Q  +    V Y  LI+ L +  R
Sbjct: 326 GCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGR 367



 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 33/83 (39%), Positives = 54/83 (65%)
 Frame = +2

Query: 41  GIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIKGFCKSDEIDKA 220
           G++P+  +YNTL+NG I    + E  +L   M   G  P+V TY+++I G CK  ++D A
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 231

Query: 221 WKLYEIILQKGMLPSLVTYNTLI 289
            +L++ +L KG++P+ VT+ TLI
Sbjct: 232 NELFDEMLVKGLIPNGVTFTTLI 254



 Score = 66.2 bits (160), Expect = 2e-10
 Identities = 34/94 (36%), Positives = 57/94 (60%)
 Frame = +2

Query: 8   AMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIK 187
           A K  + MI   I+ ++  Y  LI+GL +E +  +A +++ EM   G  P++ TYT++I 
Sbjct: 336 AFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIIN 395

Query: 188 GFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLI 289
            FCK  ++ K  KL + + + G +PS+VTYN L+
Sbjct: 396 EFCKKGDVWKGSKLLKEMQRNGHVPSVVTYNVLM 429


>XP_006828912.1 PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Amborella trichopoda] ERM96328.1 hypothetical
           protein AMTR_s00001p00203780 [Amborella trichopoda]
          Length = 583

 Score = 97.4 bits (241), Expect = 2e-21
 Identities = 44/87 (50%), Positives = 62/87 (71%)
 Frame = +2

Query: 29  MIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIKGFCKSDE 208
           M+ EGI P+  TY+ LINGL  E KI++A  L DEM  RG VPN +T+T +I G+CK   
Sbjct: 277 MVEEGIAPDVVTYSVLINGLCRERKIEQACDLFDEMNERGLVPNSITFTTLIDGYCKEGN 336

Query: 209 IDKAWKLYEIILQKGMLPSLVTYNTLI 289
           I+K  ++Y+ +++KG+ P LVTYN+LI
Sbjct: 337 IEKGLQIYQKMMKKGLKPDLVTYNSLI 363



 Score = 75.9 bits (185), Expect = 8e-14
 Identities = 37/109 (33%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           +A K   EM+ EG+ P+  TY  +I+G      +    +L++EM++ G VP V+TY +++
Sbjct: 444 DAQKALREMLREGLTPDVATYTMVIDGYCRRGDVMMGFKLLEEMKINGIVPGVITYNVLM 503

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLI--AKLSRGSRDRTK 325
            G CK  ++  A  L   +L  G+ P  VTYN L+     S GS++  K
Sbjct: 504 NGLCKQGQMKNAGMLLNAMLNLGIAPDDVTYNILLDGRCRSEGSKELVK 552



 Score = 73.9 bits (180), Expect = 4e-13
 Identities = 36/95 (37%), Positives = 58/95 (61%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           +A  + +EM   G+ PN  T+ TLI+G  +E  I++ LQ+  +M  +G  P++VTY  +I
Sbjct: 304 QACDLFDEMNERGLVPNSITFTTLIDGYCKEGNIEKGLQIYQKMMKKGLKPDLVTYNSLI 363

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLI 289
            G CK  E+ +A +L+  I + G+ P  +TY TLI
Sbjct: 364 YGHCKVGELKEARELFFEIRKMGLRPDKITYTTLI 398



 Score = 72.8 bits (177), Expect = 9e-13
 Identities = 36/99 (36%), Positives = 59/99 (59%)
 Frame = +2

Query: 8   AMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIK 187
           AM++  EM+ EGI+ +   Y  LI GL  E  I +A + + EM   G  P+V TYT++I 
Sbjct: 410 AMEIRREMVKEGIELDNVAYTALIAGLSREGWIPDAQKALREMLREGLTPDVATYTMVID 469

Query: 188 GFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSR 304
           G+C+  ++   +KL E +   G++P ++TYN L+  L +
Sbjct: 470 GYCRRGDVMMGFKLLEEMKINGIVPGVITYNVLMNGLCK 508



 Score = 72.0 bits (175), Expect = 2e-12
 Identities = 36/100 (36%), Positives = 63/100 (63%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           + +++ ++M+ +G+KP+  TYN+LI G  +  ++KEA +L  E+   G  P+ +TYT +I
Sbjct: 339 KGLQIYQKMMKKGLKPDLVTYNSLIYGHCKVGELKEARELFFEIRKMGLRPDKITYTTLI 398

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSR 304
            GFCK  +I  A ++   ++++G+    V Y  LIA LSR
Sbjct: 399 DGFCKEGDIKAAMEIRREMVKEGIELDNVAYTALIAGLSR 438



 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 38/102 (37%), Positives = 62/102 (60%)
 Frame = +2

Query: 14  KMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIKGF 193
           K+ EEM + GI P   TYN L+NGL ++ ++K A  L++ M   G  P+ VTY I++ G 
Sbjct: 482 KLLEEMKINGIVPGVITYNVLMNGLCKQGQMKNAGMLLNAMLNLGIAPDDVTYNILLDGR 541

Query: 194 CKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSRDR 319
           C+S+   +  KL     +KG++     Y++LI+++ + SRDR
Sbjct: 542 CRSEGSKELVKLRG---EKGLVSDYAAYSSLISEVGQRSRDR 580



 Score = 70.1 bits (170), Expect = 8e-12
 Identities = 32/95 (33%), Positives = 60/95 (63%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA  +  E+   G+ P+  ++NTLINGL ++  ++    L   M   G  P+VVTY+++I
Sbjct: 234 EAQLLFREIGNRGLTPSVVSFNTLINGLCKKGDLEGGFSLKRLMVEEGIAPDVVTYSVLI 293

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLI 289
            G C+  +I++A  L++ + ++G++P+ +T+ TLI
Sbjct: 294 NGLCRERKIEQACDLFDEMNERGLVPNSITFTTLI 328



 Score = 69.3 bits (168), Expect = 2e-11
 Identities = 32/93 (34%), Positives = 56/93 (60%)
 Frame = +2

Query: 26  EMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIKGFCKSD 205
           E++  G  PN +T+N +++      KIKEA  L  E+  RG  P+VV++  +I G CK  
Sbjct: 206 EILDYGFPPNVYTFNMIMHSFSRIGKIKEAQLLFREIGNRGLTPSVVSFNTLINGLCKKG 265

Query: 206 EIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSR 304
           +++  + L  +++++G+ P +VTY+ LI  L R
Sbjct: 266 DLEGGFSLKRLMVEEGIAPDVVTYSVLINGLCR 298


>AFV61035.1 pentatricopeptide repeat-containing protein 11, partial [Lippia
           alba]
          Length = 413

 Score = 96.7 bits (239), Expect = 2e-21
 Identities = 43/100 (43%), Positives = 70/100 (70%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           E  ++   M+  G++P+ +TY+ LINGL +E+K+ +A +L DEM ++G VPN VT+T +I
Sbjct: 177 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLI 236

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSR 304
            G CK+  +D A ++Y+ +L + +LP L+TYNTLI  L +
Sbjct: 237 DGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCK 276



 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 35/102 (34%), Positives = 63/102 (61%)
 Frame = +2

Query: 8   AMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIK 187
           AM++ ++M+ + + P+  TYNTLI GL ++  + +A  LIDEM ++G  P+  TYT +I 
Sbjct: 248 AMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLID 307

Query: 188 GFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
           G CK  ++D A++  + ++Q+ +    V Y  +I+ L +  R
Sbjct: 308 GCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGR 349



 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 33/83 (39%), Positives = 54/83 (65%)
 Frame = +2

Query: 41  GIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIKGFCKSDEIDKA 220
           G++P+  +YNTL+NG I    + E  +L   M   G  P+V TY+++I G CK  ++D A
Sbjct: 154 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 213

Query: 221 WKLYEIILQKGMLPSLVTYNTLI 289
            +L++ +L KG++P+ VT+ TLI
Sbjct: 214 NELFDEMLVKGLVPNGVTFTTLI 236



 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 30/95 (31%), Positives = 60/95 (63%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           +A ++ +EM+++G+ PN  T+ TLI+G  +  ++  A+++  +M  +  +P+++TY  +I
Sbjct: 212 DANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLI 271

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLI 289
            G CK  ++++A  L + +  KG+ P   TY TLI
Sbjct: 272 YGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLI 306



 Score = 63.2 bits (152), Expect = 2e-09
 Identities = 31/89 (34%), Positives = 54/89 (60%)
 Frame = +2

Query: 23  EEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIKGFCKS 202
           + MI E I+ ++  Y  +I+GL +E +  +A +++ EM   G  P+  TYT++I  FCK 
Sbjct: 323 KRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKK 382

Query: 203 DEIDKAWKLYEIILQKGMLPSLVTYNTLI 289
            ++ K  KL + + + G +PS+ TYN L+
Sbjct: 383 GDVWKGSKLLKEMQRNGHVPSVXTYNVLM 411


>XP_006856874.1 PREDICTED: pentatricopeptide repeat-containing protein At1g09900
           [Amborella trichopoda] ERN18341.1 hypothetical protein
           AMTR_s00055p00195550 [Amborella trichopoda]
          Length = 481

 Score = 97.1 bits (240), Expect = 2e-21
 Identities = 49/103 (47%), Positives = 68/103 (66%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EAM + EEM   G+KP+ FT+NTLINGL + +K++EAL L  EME RG  PNVVTY  +I
Sbjct: 133 EAMPLLEEMYSNGLKPDVFTFNTLINGLCKADKVEEALVLHKEMEKRGCQPNVVTYNTLI 192

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G CK    ++A  L E +   G+ P++ TYNTL+  L + ++
Sbjct: 193 DGICKGGIAEEAMSLLEEMHHSGLTPNVFTYNTLMNFLCKRNK 235



 Score = 92.0 bits (227), Expect = 1e-19
 Identities = 48/100 (48%), Positives = 63/100 (63%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EAM + EEM   G+ PN FTYNTL+N L + NK++EAL L  EM   G  PNVVTYT +I
Sbjct: 203 EAMSLLEEMHHSGLTPNVFTYNTLMNFLCKRNKVEEALALHKEMAKIGSQPNVVTYTTLI 262

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSR 304
            G CK     +   L E +   G+ P++VTY+TLI+ L +
Sbjct: 263 DGLCKDGRTKETMALLEEMHHNGLNPNVVTYSTLISALCK 302



 Score = 86.7 bits (213), Expect = 1e-17
 Identities = 41/105 (39%), Positives = 66/105 (62%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+ + +EM   G +PN  TY TLI+GL ++ + KE + L++EM   G  PNVVTY+ +I
Sbjct: 238 EALALHKEMAKIGSQPNVVTYTTLIDGLCKDGRTKETMALLEEMHHNGLNPNVVTYSTLI 297

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSRDR 319
              CK +++++A  L++ +   G  P++VTYN LI  L +  R +
Sbjct: 298 SALCKKNQVEEALALHKEMKNNGCQPNIVTYNALIDGLCKDGRTK 342



 Score = 85.5 bits (210), Expect = 3e-17
 Identities = 42/105 (40%), Positives = 66/105 (62%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+ + +EM   G +PN  TYN LI+GL ++ + KE + L++EM   G  PNVVTY+ +I
Sbjct: 308 EALALHKEMKNNGCQPNIVTYNALIDGLCKDGRTKETMALLEEMGHNGLNPNVVTYSTLI 367

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSRDR 319
              C  +++++A  L++ +  KG  P +V YNTLI  L +G R +
Sbjct: 368 SVLCNRNKVEEALALHKEMENKGCQPDVVMYNTLIDGLCKGGRTK 412



 Score = 83.2 bits (204), Expect = 2e-16
 Identities = 42/98 (42%), Positives = 61/98 (62%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           E M + EEM   G+ PN  TY+TLI+ L ++N+++EAL L  EM+  G  PN+VTY  +I
Sbjct: 273 ETMALLEEMHHNGLNPNVVTYSTLISALCKKNQVEEALALHKEMKNNGCQPNIVTYNALI 332

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKL 298
            G CK     +   L E +   G+ P++VTY+TLI+ L
Sbjct: 333 DGLCKDGRTKETMALLEEMGHNGLNPNVVTYSTLISVL 370



 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 37/101 (36%), Positives = 67/101 (66%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EAM + + +  +G +PN  TY  L++GL +  + +EA+ L++EM   G  P+V T+  +I
Sbjct: 98  EAMAILKAVGKKGCQPNVVTYTVLMDGLCKGGRTEEAMPLLEEMYSNGLKPDVFTFNTLI 157

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRG 307
            G CK+D++++A  L++ + ++G  P++VTYNTLI  + +G
Sbjct: 158 NGLCKADKVEEALVLHKEMEKRGCQPNVVTYNTLIDGICKG 198



 Score = 79.7 bits (195), Expect = 3e-15
 Identities = 39/105 (37%), Positives = 65/105 (61%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+ + +EM   G +PN  TYNTLI+G+ +    +EA+ L++EM   G  PNV TY  ++
Sbjct: 168 EALVLHKEMEKRGCQPNVVTYNTLIDGICKGGIAEEAMSLLEEMHHSGLTPNVFTYNTLM 227

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSRDR 319
              CK +++++A  L++ + + G  P++VTY TLI  L +  R +
Sbjct: 228 NFLCKRNKVEEALALHKEMAKIGSQPNVVTYTTLIDGLCKDGRTK 272



 Score = 78.6 bits (192), Expect = 8e-15
 Identities = 38/104 (36%), Positives = 62/104 (59%)
 Frame = +2

Query: 2   GEAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIM 181
           G AM+  + M    +  N FT+ TLINGL + +K++EA+ ++  +  +G  PNVVTYT++
Sbjct: 62  GRAMEHFDGMENHKLSINVFTFTTLINGLCKAHKVEEAMAILKAVGKKGCQPNVVTYTVL 121

Query: 182 IKGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
           + G CK    ++A  L E +   G+ P + T+NTLI  L +  +
Sbjct: 122 MDGLCKGGRTEEAMPLLEEMYSNGLKPDVFTFNTLINGLCKADK 165



 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 20/125 (16%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           E M + EEM   G+ PN  TY+TLI+ L   NK++EAL L  EME +G  P+VV Y  +I
Sbjct: 343 ETMALLEEMGHNGLNPNVVTYSTLISVLCNRNKVEEALALHKEMENKGCQPDVVMYNTLI 402

Query: 185 KGFCKS--------------------DEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSR 304
            G CK                     +++ +A  L++ + Q G  P++VTY TLI  L +
Sbjct: 403 DGLCKGGRTKDAMSLLEEICPNGLNPNKVQEALALHKEMGQMGCQPNIVTYRTLIGGLRK 462

Query: 305 GSRDR 319
             R +
Sbjct: 463 DGRTK 467



 Score = 60.5 bits (145), Expect = 2e-08
 Identities = 28/85 (32%), Positives = 50/85 (58%)
 Frame = +2

Query: 59  FTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIKGFCKSDEIDKAWKLYEI 238
           F  N ++ GL +E ++  A++  D ME      NV T+T +I G CK+ ++++A  + + 
Sbjct: 46  FLLNMVMGGLCKEGRVGRAMEHFDGMENHKLSINVFTFTTLINGLCKAHKVEEAMAILKA 105

Query: 239 ILQKGMLPSLVTYNTLIAKLSRGSR 313
           + +KG  P++VTY  L+  L +G R
Sbjct: 106 VGKKGCQPNVVTYTVLMDGLCKGGR 130


>4WN4_A Chain A, Crystal Structure Of Designed Cppr-polya Protein 4WN4_B
           Chain B, Crystal Structure Of Designed Cppr-polya
           Protein
          Length = 303

 Score = 95.1 bits (235), Expect = 2e-21
 Identities = 46/103 (44%), Positives = 73/103 (70%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EE   +GI PN  TY TLI+GL +  +++EAL+L +E + +G VPNVVTYT +I
Sbjct: 21  EALELFEEXKEKGIVPNVVTYTTLISGLGKAGRLEEALELFEEXKEKGIVPNVVTYTTLI 80

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E   +KG++P++VTY TLI+ L +  R
Sbjct: 81  SGLGKAGRLEEALELFEEXKEKGIVPNVVTYTTLISGLGKAGR 123



 Score = 95.1 bits (235), Expect = 2e-21
 Identities = 46/103 (44%), Positives = 73/103 (70%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EE   +GI PN  TY TLI+GL +  +++EAL+L +E + +G VPNVVTYT +I
Sbjct: 56  EALELFEEXKEKGIVPNVVTYTTLISGLGKAGRLEEALELFEEXKEKGIVPNVVTYTTLI 115

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E   +KG++P++VTY TLI+ L +  R
Sbjct: 116 SGLGKAGRLEEALELFEEXKEKGIVPNVVTYTTLISGLGKAGR 158



 Score = 95.1 bits (235), Expect = 2e-21
 Identities = 46/103 (44%), Positives = 73/103 (70%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EE   +GI PN  TY TLI+GL +  +++EAL+L +E + +G VPNVVTYT +I
Sbjct: 91  EALELFEEXKEKGIVPNVVTYTTLISGLGKAGRLEEALELFEEXKEKGIVPNVVTYTTLI 150

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E   +KG++P++VTY TLI+ L +  R
Sbjct: 151 SGLGKAGRLEEALELFEEXKEKGIVPNVVTYTTLISGLGKAGR 193



 Score = 95.1 bits (235), Expect = 2e-21
 Identities = 46/103 (44%), Positives = 73/103 (70%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EE   +GI PN  TY TLI+GL +  +++EAL+L +E + +G VPNVVTYT +I
Sbjct: 126 EALELFEEXKEKGIVPNVVTYTTLISGLGKAGRLEEALELFEEXKEKGIVPNVVTYTTLI 185

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E   +KG++P++VTY TLI+ L +  R
Sbjct: 186 SGLGKAGRLEEALELFEEXKEKGIVPNVVTYTTLISGLGKAGR 228



 Score = 95.1 bits (235), Expect = 2e-21
 Identities = 46/103 (44%), Positives = 73/103 (70%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EE   +GI PN  TY TLI+GL +  +++EAL+L +E + +G VPNVVTYT +I
Sbjct: 161 EALELFEEXKEKGIVPNVVTYTTLISGLGKAGRLEEALELFEEXKEKGIVPNVVTYTTLI 220

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSR 313
            G  K+  +++A +L+E   +KG++P++VTY TLI+ L +  R
Sbjct: 221 SGLGKAGRLEEALELFEEXKEKGIVPNVVTYTTLISGLGKAGR 263



 Score = 93.6 bits (231), Expect = 9e-21
 Identities = 46/105 (43%), Positives = 73/105 (69%)
 Frame = +2

Query: 5   EAMKMCEEMIMEGIKPNEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMI 184
           EA+++ EE   +GI PN  TY TLI+GL +  +++EAL+L +E + +G VPNVVTYT +I
Sbjct: 196 EALELFEEXKEKGIVPNVVTYTTLISGLGKAGRLEEALELFEEXKEKGIVPNVVTYTTLI 255

Query: 185 KGFCKSDEIDKAWKLYEIILQKGMLPSLVTYNTLIAKLSRGSRDR 319
            G  K+  +++A +L+E   +KG++P++VTY TLI+ L +    R
Sbjct: 256 SGLGKAGRLEEALELFEEXKEKGIVPNVVTYTTLISGLGKAGCGR 300



 Score = 83.6 bits (205), Expect = 5e-17
 Identities = 39/87 (44%), Positives = 62/87 (71%)
 Frame = +2

Query: 53  NEFTYNTLINGLIEENKIKEALQLIDEMELRGFVPNVVTYTIMIKGFCKSDEIDKAWKLY 232
           N  TY TLI+GL +  +++EAL+L +E + +G VPNVVTYT +I G  K+  +++A +L+
Sbjct: 2   NSVTYTTLISGLGKAGRLEEALELFEEXKEKGIVPNVVTYTTLISGLGKAGRLEEALELF 61

Query: 233 EIILQKGMLPSLVTYNTLIAKLSRGSR 313
           E   +KG++P++VTY TLI+ L +  R
Sbjct: 62  EEXKEKGIVPNVVTYTTLISGLGKAGR 88