BLASTX nr result
ID: Ephedra29_contig00015424
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00015424
(1696 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABK25099.1 unknown [Picea sitchensis] 310 2e-97
XP_006836117.1 PREDICTED: mediator of RNA polymerase II transcri... 258 1e-76
XP_006828308.1 PREDICTED: mediator of RNA polymerase II transcri... 248 4e-73
KVI08555.1 Mediator complex, subunit Med4 [Cynara cardunculus va... 238 2e-69
XP_016472262.1 PREDICTED: mediator of RNA polymerase II transcri... 236 8e-69
XP_004236703.1 PREDICTED: mediator of RNA polymerase II transcri... 235 2e-68
XP_016512257.1 PREDICTED: mediator of RNA polymerase II transcri... 234 4e-68
XP_009599957.1 PREDICTED: mediator of RNA polymerase II transcri... 234 6e-68
OMO72618.1 Mediator complex, subunit Med4 [Corchorus capsularis] 234 1e-67
XP_015071885.1 PREDICTED: mediator of RNA polymerase II transcri... 233 2e-67
XP_019231576.1 PREDICTED: mediator of RNA polymerase II transcri... 231 6e-67
XP_009598014.1 PREDICTED: mediator of RNA polymerase II transcri... 230 2e-66
XP_019238085.1 PREDICTED: mediator of RNA polymerase II transcri... 230 2e-66
XP_016450083.1 PREDICTED: mediator of RNA polymerase II transcri... 230 2e-66
XP_002273310.1 PREDICTED: mediator of RNA polymerase II transcri... 230 3e-66
XP_010267723.1 PREDICTED: mediator of RNA polymerase II transcri... 231 3e-66
XP_004306650.1 PREDICTED: mediator of RNA polymerase II transcri... 230 3e-66
XP_011077385.1 PREDICTED: mediator of RNA polymerase II transcri... 229 3e-66
ALO61893.1 mediator of RNA polymerase II transcription subunit 4... 229 3e-66
XP_009762237.1 PREDICTED: mediator of RNA polymerase II transcri... 229 5e-66
>ABK25099.1 unknown [Picea sitchensis]
Length = 393
Score = 310 bits (795), Expect = 2e-97
Identities = 178/394 (45%), Positives = 229/394 (58%), Gaps = 14/394 (3%)
Frame = +2
Query: 200 MQNQNMLPSPGRLG-------GPGIPLQPATSSALQRXXXXXXXXXXXXXVEVAHRVRPL 358
MQN + PSP RLG +P P++S ++A R P+
Sbjct: 2 MQNPPIFPSPARLGLSVAHSPAATVPSVPSSSQ------------------KIAERSTPI 43
Query: 359 EKLPPYERAHALLNELAGLTTRLFEVSNNKAAWQMSYRSNLPKFLPEANIPKEALEAKTT 538
LPPY RA L++E+AGLT+RLFEVSNN+AAW +YR ++P FL + IP EA A TT
Sbjct: 44 FNLPPYRRAQLLIHEMAGLTSRLFEVSNNRAAWLTAYRGSIPTFLQGSCIPPEAAAATTT 103
Query: 539 REVLNIAETRQNMLIDAVTEILDLQXXXXXXXXXXXXXASKDIAMRKFAKKLREAQLVLE 718
+E+L+I E+ QN+L +AVTE+ ++Q +SKD AMR FA+KL +AQ VLE
Sbjct: 104 KEILSILESHQNLLEEAVTELQEIQKIEQDKQAVAQEISSKDSAMRVFARKLHDAQQVLE 163
Query: 719 DTFDKFSEYKPSKRAKASSSVPKDGVAAAELSLSDILSYAHKISYTTFAPPDFGADQAPL 898
T + + Y+ KR+K+ +S P D V L L+DIL+YAH+ISYTTFA PDFGA +APL
Sbjct: 164 QTLEDYEGYRIGKRSKSLNSSPGDAVGLGHLELNDILTYAHRISYTTFATPDFGAGKAPL 223
Query: 899 RGAMAPAPQEEQMRASMLYQFADLDVGIPKTTTAETMPVAIIEXXXXXXXQATAVEA--- 1069
RGA+ PAPQEEQMRAS LYQ+ADLDVGIPK E + VAI+E E
Sbjct: 224 RGAIPPAPQEEQMRASQLYQYADLDVGIPKQAVTEPLSVAIVEPAPDRVVVNPKQEVVPG 283
Query: 1070 --PPIPMLPPGWRPGMPVDLSXXXXXXXXXXGWKPGDPVPMPSI--PPVGLKPEIAATKP 1237
P +P +PPGW+PGMP++L GWKPGDPVP+P P G KP A P
Sbjct: 284 MLPGMPPVPPGWKPGMPIEL------PVMPPGWKPGDPVPLPPAMEVPAGWKPGDAVVLP 337
Query: 1238 PRAEEXXXXXXXXXXXXRGLQNQPIQVKFVNLDI 1339
E R +PIQV++V LDI
Sbjct: 338 KPEEAVQAPPLRPPALAR--PAEPIQVQYVQLDI 369
>XP_006836117.1 PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Amborella trichopoda] XP_011620672.1 PREDICTED: mediator
of RNA polymerase II transcription subunit 4 [Amborella
trichopoda] XP_011620673.1 PREDICTED: mediator of RNA
polymerase II transcription subunit 4 [Amborella
trichopoda] ERM98970.1 hypothetical protein
AMTR_s00226p00023090 [Amborella trichopoda]
Length = 415
Score = 258 bits (658), Expect = 1e-76
Identities = 163/413 (39%), Positives = 219/413 (53%), Gaps = 33/413 (7%)
Frame = +2
Query: 200 MQNQNMLPSPGRLG---------------GPG------IPLQPATSSALQRXXXXXXXXX 316
MQN +LPSP RLG P +P QP+TS++
Sbjct: 1 MQNAVVLPSPARLGLSTSTPLPLNPNQNPSPSPQISIPVPNQPSTSTSSS---------- 50
Query: 317 XXXXVEVAHRVRP---LEKLPPYERAHALLNELAGLTTRLFEVSNNKAAWQMSYRSNLPK 487
+ H P L LPP+ RA LL L+ LTT+LF+VS N+++W SYR LP
Sbjct: 51 -IPAPPLLHHQTPSTLLSLLPPHPRAQFLLLHLSALTTKLFDVSGNRSSWLASYRGTLPT 109
Query: 488 FLPEANIPKEALEAKTTREVLNIAETRQNMLIDAVTEILDLQXXXXXXXXXXXXXASKDI 667
FLP + +P+EA A TT+E+L++ + Q+ L +A+TE+ + KD
Sbjct: 110 FLPASTLPQEASSASTTKEILSLISSTQSQLSEAITELQEALDLEEAKRKLARETHLKDS 169
Query: 668 AMRKFAKKLREAQLVLEDTFDKFSEY-KPSKRAKASSSVPKDGVAAAELSLSDILSYAHK 844
AM FAKK+++++ +L + + +Y KP KR K +S G + L LS+ILSYAH+
Sbjct: 170 AMLAFAKKVKQSEQLLGHLVEDYEDYRKPKKRFKPNSQAEDSG--DSYLKLSEILSYAHR 227
Query: 845 ISYTTFAPPDFGADQAPLRGAMAPAPQEEQMRASMLYQFADLDVGIP------KTTTAET 1006
ISY+TFAPP+FG+ QAPLRGA+ PAPQEEQMRAS LYQFADLDVG+P K T+
Sbjct: 228 ISYSTFAPPEFGSGQAPLRGALPPAPQEEQMRASQLYQFADLDVGLPQREETIKPTSVTP 287
Query: 1007 MPVAIIEXXXXXXXQATAVEAPPIPMLPPGWRPGMPVDLSXXXXXXXXXXGWKPGDPVPM 1186
+ +E + PP +P GW+PGMP+++ GWKPGDPVP+
Sbjct: 288 SGINFVEPMVDVKAIQGLIVPPP---MPSGWKPGMPIEIG---DIPSVPPGWKPGDPVPL 341
Query: 1187 PSI--PPVGLKPEIAATKPPRAEEXXXXXXXXXXXXRGLQNQPIQVKFVNLDI 1339
P + P G KP A P AEE +PIQVKFV LDI
Sbjct: 342 PHVVEVPAGWKPGDAVVLPKPAEETVPMVQKQIVSN---APEPIQVKFVQLDI 391
>XP_006828308.1 PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Amborella trichopoda] ERM95724.1 hypothetical protein
AMTR_s00023p00236700 [Amborella trichopoda]
Length = 409
Score = 248 bits (633), Expect = 4e-73
Identities = 157/396 (39%), Positives = 214/396 (54%), Gaps = 16/396 (4%)
Frame = +2
Query: 200 MQNQNMLPSPGRLG---GPGIPLQPATSSALQRXXXXXXXXXXXXXVE---VAHRVRP-- 355
MQN +LPSP RLG +PL S + + + H P
Sbjct: 1 MQNAVVLPSPARLGLSTSTPLPLNQNPSPQISIPVPNLPSTSTSSSLPAPPLLHHQTPST 60
Query: 356 -LEKLPPYERAHALLNELAGLTTRLFEVSNNKAAWQMSYRSNLPKFLPEANIPKEALEAK 532
L LPP+ RA L+ L+ LTT+LF+VS N+++W SYR LP FLP + +P+EA A
Sbjct: 61 LLSLLPPHPRAQFLVLHLSALTTKLFDVSGNRSSWLASYRGTLPTFLPASTLPQEASSAS 120
Query: 533 TTREVLNIAETRQNMLIDAVTEILDLQXXXXXXXXXXXXXASKDIAMRKFAKKLREAQLV 712
TT+E+L++ + Q+ L +A+ E+ + KD AM FAKK+++++ +
Sbjct: 121 TTKEILSLISSTQSQLSEAIIELQEALDLEEAKRKLARETHLKDSAMLAFAKKVKQSEQL 180
Query: 713 LEDTFDKFSEY-KPSKRAKASSSVPKDGVAAAELSLSDILSYAHKISYTTFAPPDFGADQ 889
L + + +Y KP KR K +S + + L LSDILSYAH+ISYTTFAPP+FG+ Q
Sbjct: 181 LGCLVEDYEDYRKPKKRFKPNSQ--SEDSCDSYLKLSDILSYAHRISYTTFAPPEFGSVQ 238
Query: 890 A-PLRGAMAPAPQEEQMRASMLYQFADLDVGIP---KTTTAETMPVAIIEXXXXXXXQAT 1057
A PLRGA+ PAPQEEQ+RAS LYQFADLDVG+P +T + ++E
Sbjct: 239 APPLRGALPPAPQEEQIRASQLYQFADLDVGLPQKEETIKPTLSGIDLVEPMVDVKAIQG 298
Query: 1058 AVEAPPIPMLPPGWRPGMPVDLSXXXXXXXXXXGWKPGDPVPMPSI--PPVGLKPEIAAT 1231
+ PP +P GW+PGMP+++ GWKPGDPVP+P + P G KP A
Sbjct: 299 LIVPPP---MPSGWKPGMPIEIG---DVPIVPPGWKPGDPVPLPPVVEVPAGWKPGDAVV 352
Query: 1232 KPPRAEEXXXXXXXXXXXXRGLQNQPIQVKFVNLDI 1339
P AEE +PIQVKFV LDI
Sbjct: 353 LPKHAEETVPMVQKPLVNN---APEPIQVKFVQLDI 385
>KVI08555.1 Mediator complex, subunit Med4 [Cynara cardunculus var. scolymus]
Length = 400
Score = 238 bits (607), Expect = 2e-69
Identities = 140/334 (41%), Positives = 186/334 (55%), Gaps = 6/334 (1%)
Frame = +2
Query: 356 LEKLPPYERAHALLNELAGLTTRLFEVSNNKAAWQMSYRSNLPKFLPEANIPKEALEAKT 535
L LPP RA ++L +A LT+RLFEVS+N+A W+ ++R + P FL + T
Sbjct: 60 LPLLPPLSRAQSILLRMASLTSRLFEVSSNQAQWRSTFRGSFPTFLSTQTVSSPDSSPAT 119
Query: 536 TREVLNIAETRQNMLIDAVTEILDLQXXXXXXXXXXXXXASKDIAMRKFAKKLREAQLVL 715
++E++ + T Q L ++VTE+ ++ SKD A+ FA KL+EA+ VL
Sbjct: 120 SKEIIALFTTLQTQLFESVTELQEILDLQDAKQKITREIRSKDSAILAFANKLKEAERVL 179
Query: 716 EDTFDKFSEYKPSKRAKASSSVPKDGVA--AAELSLSDILSYAHKISYTTFAPPDFGADQ 889
+ D +S+Y+ KR+K + A +L+LSDILSYAH+ISYTTFAPP+FGA
Sbjct: 180 DILVDDYSDYRRLKRSKVEENEESSSTTTVATQLNLSDILSYAHRISYTTFAPPEFGAGT 239
Query: 890 APLRGAMAPAPQEEQMRASMLYQFADLDVGIPKTTTAETMPV-AIIEXXXXXXXQATAV- 1063
APLRGA+ PAPQEEQMRAS LY FADLDVG+PK E V + E A V
Sbjct: 240 APLRGALPPAPQEEQMRASQLYSFADLDVGLPKLAENEKFAVEPLAENPSDPNSLANMVI 299
Query: 1064 --EAPPIPMLPPGWRPGMPVDLSXXXXXXXXXXGWKPGDPVPMPSIPPVGLKPEIAATKP 1237
PP ++P GW+PGMPV L GWKPGDPV +P + +G P
Sbjct: 300 KDMLPPNIVVPSGWKPGMPVQL-PTDLPILPPAGWKPGDPVALPPLDSLG--------GP 350
Query: 1238 PRAEEXXXXXXXXXXXXRGLQNQPIQVKFVNLDI 1339
PR E+ +G QPIQV+ V LDI
Sbjct: 351 PRTEDQQTQPIHVPGFAKG--PQPIQVRHVQLDI 382
>XP_016472262.1 PREDICTED: mediator of RNA polymerase II transcription subunit 4-like
[Nicotiana tabacum]
Length = 398
Score = 236 bits (603), Expect = 8e-69
Identities = 150/391 (38%), Positives = 208/391 (53%), Gaps = 16/391 (4%)
Frame = +2
Query: 215 MLPSPGRLGGPGIPLQPAT---------SSALQRXXXXXXXXXXXXXVEVAHRVRPLEKL 367
+L SP RLG P P P+ SS L + + + PL L
Sbjct: 9 LLQSPARLGLP-TPSSPSLQNPTTPPKFSSQLSQHLQPHQQANILTTSTTSSTLLPL--L 65
Query: 368 PPYERAHALLNELAGLTTRLFEVSNNKAAWQMSYRSNLPKFLPEANIPKEALEAKTTREV 547
PP RA +LL ++A L++RLFEVS N++ W ++R + P FLP A + +++E+
Sbjct: 66 PPLSRAQSLLIQMASLSSRLFEVSPNRSHWLSAFRGSFPSFLPSAAPVPQDSYPSSSKEI 125
Query: 548 LNIAETRQNMLIDAVTEILDLQXXXXXXXXXXXXXASKDIAMRKFAKKLREAQLVLEDTF 727
L++ + Q L +AV E+ ++ S D A+ FA KL+ A+ VL++
Sbjct: 126 LSVFTSLQTQLFEAVAELQEILDLQDEKQKVTREIRSNDSAILAFANKLKGAERVLDNLV 185
Query: 728 DKFSEYKPSKRAKASSSVPKDGVA--AAELSLSDILSYAHKISYTTFAPPDFGADQAPLR 901
D +S+Y+ KR K + + + V A +L LSDILSYAH+ISYTTFAPP+FGA QAPLR
Sbjct: 186 DDYSDYRRPKRVKLENDIDESSVTTVATQLKLSDILSYAHRISYTTFAPPEFGAGQAPLR 245
Query: 902 GAMAPAPQEEQMRASMLYQFADLDVGIPKTTTAETMPVAIIEXXXXXXXQATAVEA---- 1069
GA+ PAPQ+EQMRAS LY FA+LDVG+PKT + IIE T + A
Sbjct: 246 GALPPAPQDEQMRASQLYNFANLDVGLPKTDDDKE---KIIEPLIEPSADITNLSAIPGL 302
Query: 1070 -PPIPMLPPGWRPGMPVDLSXXXXXXXXXXGWKPGDPVPMPSIPPVGLKPEIAATKPPRA 1246
PP ++P GW+PGMPV+L GWKPGDP+ +P + + L PP+
Sbjct: 303 IPPNIIVPSGWKPGMPVEL--PTDLPLPPPGWKPGDPIALPPVDSLPL--------PPKV 352
Query: 1247 EEXXXXXXXXXXXXRGLQNQPIQVKFVNLDI 1339
EE R +PIQV+ V LDI
Sbjct: 353 EEAPARPVPPPGLPR--MPEPIQVRHVQLDI 381
>XP_004236703.1 PREDICTED: mediator of RNA polymerase II transcription subunit 4-like
[Solanum lycopersicum]
Length = 401
Score = 235 bits (600), Expect = 2e-68
Identities = 151/392 (38%), Positives = 218/392 (55%), Gaps = 18/392 (4%)
Frame = +2
Query: 218 LPSPGRLGGPGIPLQPAT---------SSALQRXXXXXXXXXXXXXVEVAHRVRPLEKLP 370
L SP RLG P P P+ SS + + + + PL LP
Sbjct: 10 LQSPARLGLP-TPSSPSLQNPNTAPKFSSQVSQPHQPHQQANILTTTTTSSTLLPL--LP 66
Query: 371 PYERAHALLNELAGLTTRLFEVSNNKAAWQMSYRSNLPKFLPE-ANIPKEALEAKTTREV 547
P RA +LL ++A L +RLFEVS N++ W ++R +LP FLP A +P+++ + +++E+
Sbjct: 67 PLSRAQSLLIQMASLASRLFEVSPNRSHWLSAFRGSLPSFLPSVAPVPQDSCPS-SSKEI 125
Query: 548 LNIAETRQNMLIDAVTEILDLQXXXXXXXXXXXXXASKDIAMRKFAKKLREAQLVLEDTF 727
L++ + Q L +AV E+ ++ SKD ++ FA KL+EA+ VL+
Sbjct: 126 LSVFTSLQTQLFEAVAELQEILDLQDEKQKLTREVRSKDSSILAFANKLKEAERVLDMLV 185
Query: 728 DKFSEYKPSKRAKASSSVPKDGVA--AAELSLSDILSYAHKISYTTFAPPDFGADQAPLR 901
D +S+Y+ K+AK + + V A +L LSDILSYAH+ISYTTFAPP+FGA QAPLR
Sbjct: 186 DDYSDYRRPKQAKLENDTEESSVTTVATQLKLSDILSYAHRISYTTFAPPEFGAGQAPLR 245
Query: 902 GAMAPAPQEEQMRASMLYQFADLDVGIPKTTTAETMPVAIIEXXXXXXXQA--TAVE--A 1069
GA+ PAPQ+EQ+RAS LY FADLDVG+PKT + + +IE A +A++
Sbjct: 246 GALPPAPQDEQLRASQLYIFADLDVGLPKTDEGKKIVEPLIEPLADTNSLANLSAIQGLV 305
Query: 1070 PPIPMLPPGWRPGMPVDLSXXXXXXXXXXGWKPGDPVPMPSIPPVGLKPEIAATKPPRAE 1249
PP ++P GW+PGMPV+L GWKPGDP+ +P + + L ++ T P +A
Sbjct: 306 PPNIVVPSGWKPGMPVEL--PTDLPLPPPGWKPGDPIALPPVDSLSLASKVEET-PGQA- 361
Query: 1250 EXXXXXXXXXXXXRGLQN--QPIQVKFVNLDI 1339
GL +PIQV+ V LDI
Sbjct: 362 ----------VPPAGLPRMPEPIQVRHVQLDI 383
>XP_016512257.1 PREDICTED: mediator of RNA polymerase II transcription subunit 4-like
[Nicotiana tabacum]
Length = 398
Score = 234 bits (598), Expect = 4e-68
Identities = 149/391 (38%), Positives = 207/391 (52%), Gaps = 16/391 (4%)
Frame = +2
Query: 215 MLPSPGRLGGPGIPLQPAT---------SSALQRXXXXXXXXXXXXXVEVAHRVRPLEKL 367
+L SP RLG P P P+ SS + + + + PL L
Sbjct: 9 LLQSPARLGLP-TPSSPSLQNPTAPPKFSSQVSQHLQPHQQANILTTTTTSSTLLPL--L 65
Query: 368 PPYERAHALLNELAGLTTRLFEVSNNKAAWQMSYRSNLPKFLPEANIPKEALEAKTTREV 547
PP RA +LL ++A L++RLFEVS N++ W ++R + P FLP A + +++E
Sbjct: 66 PPLSRAQSLLIQMASLSSRLFEVSPNRSHWLSAFRGSFPAFLPSAAPVPQDSYPSSSKET 125
Query: 548 LNIAETRQNMLIDAVTEILDLQXXXXXXXXXXXXXASKDIAMRKFAKKLREAQLVLEDTF 727
L++ + Q L +AV E+ ++ S D A+ FA KL+ A+ VL++
Sbjct: 126 LSVFTSLQTQLFEAVAELQEILDLQDEKQKVTREIRSNDSAILAFANKLKGAERVLDNLV 185
Query: 728 DKFSEYKPSKRAKASSSVPKDGVA--AAELSLSDILSYAHKISYTTFAPPDFGADQAPLR 901
D +S+Y+ KR K + + + V A +L LSDILSYAH+ISYTTFAPP+FGA QAPLR
Sbjct: 186 DDYSDYRRPKRVKLENDIDESSVTTVATQLKLSDILSYAHRISYTTFAPPEFGAGQAPLR 245
Query: 902 GAMAPAPQEEQMRASMLYQFADLDVGIPKTTTAETMPVAIIEXXXXXXXQATAVEA---- 1069
GA+ PAPQ+EQMRAS LY FA+LDVG+PKT + IIE T + A
Sbjct: 246 GALPPAPQDEQMRASQLYNFANLDVGLPKTDDDKE---KIIEPLIEPSADITNLSAIPGL 302
Query: 1070 -PPIPMLPPGWRPGMPVDLSXXXXXXXXXXGWKPGDPVPMPSIPPVGLKPEIAATKPPRA 1246
PP ++P GW+PGMPV+L GWKPGDP+ +P + + L PP+
Sbjct: 303 IPPNIIVPSGWKPGMPVEL--PTDLPLPPPGWKPGDPIALPPVDSLPL--------PPKV 352
Query: 1247 EEXXXXXXXXXXXXRGLQNQPIQVKFVNLDI 1339
EE R +PIQV+ V LDI
Sbjct: 353 EEAPARPVPPPGLPR--MPEPIQVRHVQLDI 381
>XP_009599957.1 PREDICTED: mediator of RNA polymerase II transcription subunit 4-like
[Nicotiana tomentosiformis]
Length = 398
Score = 234 bits (597), Expect = 6e-68
Identities = 149/391 (38%), Positives = 207/391 (52%), Gaps = 16/391 (4%)
Frame = +2
Query: 215 MLPSPGRLGGPGIPLQPAT---------SSALQRXXXXXXXXXXXXXVEVAHRVRPLEKL 367
+L SP RLG P P P+ SS L + + + PL L
Sbjct: 9 LLQSPARLGLP-TPSSPSLQNPTTPPKFSSQLSQHLQPHQQANILTTSTTSSTLLPL--L 65
Query: 368 PPYERAHALLNELAGLTTRLFEVSNNKAAWQMSYRSNLPKFLPEANIPKEALEAKTTREV 547
PP RA +LL ++A L++RLFEVS N++ W ++R + P FLP A + +++E+
Sbjct: 66 PPLSRAQSLLIQMASLSSRLFEVSPNRSHWLSAFRGSFPSFLPSAAPVPQDSYPSSSKEI 125
Query: 548 LNIAETRQNMLIDAVTEILDLQXXXXXXXXXXXXXASKDIAMRKFAKKLREAQLVLEDTF 727
L++ + Q L +AV E+ ++ S D A+ FA KL+ A+ VL++
Sbjct: 126 LSVFTSLQTQLFEAVAELQEILDLQDEKQKVTREIRSNDSAILAFANKLKGAERVLDNLV 185
Query: 728 DKFSEYKPSKRAKASSSVPKDGVA--AAELSLSDILSYAHKISYTTFAPPDFGADQAPLR 901
D +S+Y+ KR K + + + V A +L LSDILSYAH+ISYTTFAPP+FGA QAPLR
Sbjct: 186 DDYSDYRRPKRVKLENDIDESSVTTVATQLKLSDILSYAHRISYTTFAPPEFGAGQAPLR 245
Query: 902 GAMAPAPQEEQMRASMLYQFADLDVGIPKTTTAETMPVAIIEXXXXXXXQATAVEA---- 1069
GA+ PAPQ+EQMRAS LY FA+LDVG+PK + IIE T + A
Sbjct: 246 GALPPAPQDEQMRASQLYNFANLDVGLPKIDDDKE---KIIEPLIEPSADITNLSAIPGL 302
Query: 1070 -PPIPMLPPGWRPGMPVDLSXXXXXXXXXXGWKPGDPVPMPSIPPVGLKPEIAATKPPRA 1246
PP ++P GW+PGMPV+L GWKPGDP+ +P + + L PP+
Sbjct: 303 IPPNIIVPSGWKPGMPVEL--PTDLPLPPPGWKPGDPIALPPVDSLPL--------PPKV 352
Query: 1247 EEXXXXXXXXXXXXRGLQNQPIQVKFVNLDI 1339
EE R +PIQV+ V LDI
Sbjct: 353 EEAPARPVPPPGLPR--MPEPIQVRHVQLDI 381
>OMO72618.1 Mediator complex, subunit Med4 [Corchorus capsularis]
Length = 418
Score = 234 bits (597), Expect = 1e-67
Identities = 145/347 (41%), Positives = 191/347 (55%), Gaps = 19/347 (5%)
Frame = +2
Query: 356 LEKLPPYERAHALLNELAGLTTRLFEVSNNKAAWQMSYRSNLPKFLPEA--NIPKEALEA 529
L LPP RA +LL ++A L ++LFEVS N+A W ++R + P FL ++P LE+
Sbjct: 68 LSLLPPLPRAQSLLLQMASLASKLFEVSPNRAVWVSTFRGSFPSFLSSQIQSMPPPPLES 127
Query: 530 K--TTREVLNIAETRQNMLIDAVTEILDLQXXXXXXXXXXXXXASKDIAMRKFAKKLREA 703
TT+EVL++ + Q L +AV ++ ++ SKD A+ FA KL+EA
Sbjct: 128 TPTTTKEVLSLFTSLQTQLFEAVAQLQEILDLQDAKQKVAREIRSKDSAILGFASKLKEA 187
Query: 704 QLVLEDTFDKFSEYKPSKRAKASSSVPKDG------VAAAELSLSDILSYAHKISYTTFA 865
+ VL+ D +S+Y+ KR K + A++L LSDILSYAH+ISYTTFA
Sbjct: 188 ERVLDILVDDYSDYRRPKRLKLEEEAGESDDDSCTTTVASQLDLSDILSYAHRISYTTFA 247
Query: 866 PPDFGADQAPLRGAMAPAPQEEQMRASMLYQFADLDVGIPKTTTAETMPVAIIEXXXXXX 1045
PP+FGA APLRGAM PAPQEEQMRAS LY FADLDVG+PKT + V I
Sbjct: 248 PPEFGAGTAPLRGAMPPAPQEEQMRASQLYNFADLDVGLPKTVETKEKAVEAIIEPPPAQ 307
Query: 1046 XQAT-----AVEAPPIPMLPPGWRPGMPVDLSXXXXXXXXXXGWKPGDPVPMP---SIP- 1198
+A A PP +P GW+PGMPV+L GWKPGDPVP+P S+P
Sbjct: 308 PEANPLANLASLLPPNFSIPSGWKPGMPVEL--PKDLPVPPPGWKPGDPVPLPPLDSLPI 365
Query: 1199 PVGLKPEIAATKPPRAEEXXXXXXXXXXXXRGLQNQPIQVKFVNLDI 1339
P +P + PP + N+PIQV+ V LDI
Sbjct: 366 PRMEEPHLRPVPPPGLHK---------------PNEPIQVRHVELDI 397
>XP_015071885.1 PREDICTED: mediator of RNA polymerase II transcription subunit 4-like
[Solanum pennellii]
Length = 401
Score = 233 bits (594), Expect = 2e-67
Identities = 149/390 (38%), Positives = 215/390 (55%), Gaps = 16/390 (4%)
Frame = +2
Query: 218 LPSPGRLGGPGIPLQPAT---------SSALQRXXXXXXXXXXXXXVEVAHRVRPLEKLP 370
L SP RLG P P P+ SS + + + + PL LP
Sbjct: 10 LQSPARLGLP-TPSSPSLQNPNTAPKFSSQVSQPHQPHQQANILTTTTTSSTLLPL--LP 66
Query: 371 PYERAHALLNELAGLTTRLFEVSNNKAAWQMSYRSNLPKFLPE-ANIPKEALEAKTTREV 547
P RA +LL ++A L +RLFEVS N++ W ++R +LP FLP A +P+++ + +++E+
Sbjct: 67 PLSRAQSLLIQMASLASRLFEVSPNRSHWLSAFRGSLPSFLPSVAPVPQDSCPS-SSKEI 125
Query: 548 LNIAETRQNMLIDAVTEILDLQXXXXXXXXXXXXXASKDIAMRKFAKKLREAQLVLEDTF 727
L++ + Q L +AV E+ ++ SKD ++ FA KL+EA+ VL+
Sbjct: 126 LSVFTSLQTQLFEAVAELQEILDLQDEKQKLTREVRSKDSSILAFANKLKEAERVLDMLV 185
Query: 728 DKFSEYKPSKRAKASSSVPKDGVA--AAELSLSDILSYAHKISYTTFAPPDFGADQAPLR 901
D +S+Y+ K+AK S + V A +L LSDILSYAH+ISYTTFAPP+FGA QAPLR
Sbjct: 186 DDYSDYRRPKQAKLESDTEESSVTTVATQLKLSDILSYAHRISYTTFAPPEFGAGQAPLR 245
Query: 902 GAMAPAPQEEQMRASMLYQFADLDVGIPKTTTAETMPVAIIEXXXXXXXQA--TAVEA-- 1069
GA+ PAPQ+EQ+RAS LY FADLDVG+PKT + + +IE A +A+++
Sbjct: 246 GALPPAPQDEQLRASQLYIFADLDVGLPKTDEGKKIVEPLIEPLADTNPLANLSAIQSLV 305
Query: 1070 PPIPMLPPGWRPGMPVDLSXXXXXXXXXXGWKPGDPVPMPSIPPVGLKPEIAATKPPRAE 1249
P ++P GW+PGMPV+L GWKPGDP+ +P + + L ++ E
Sbjct: 306 PSNIVVPSGWKPGMPVEL--PTDLPLPPPGWKPGDPIALPPVDSLSLASKV--------E 355
Query: 1250 EXXXXXXXXXXXXRGLQNQPIQVKFVNLDI 1339
E R +PIQV+ V LDI
Sbjct: 356 EAPGQAVPPAGLPR--MPEPIQVRHVQLDI 383
>XP_019231576.1 PREDICTED: mediator of RNA polymerase II transcription subunit 4-like
[Nicotiana attenuata] OIT06591.1 mediator of rna
polymerase ii transcription subunit 4 [Nicotiana
attenuata]
Length = 398
Score = 231 bits (590), Expect = 6e-67
Identities = 146/391 (37%), Positives = 206/391 (52%), Gaps = 16/391 (4%)
Frame = +2
Query: 215 MLPSPGRLGGPGIPLQPAT---------SSALQRXXXXXXXXXXXXXVEVAHRVRPLEKL 367
+L SP RLG P P P+ SS + + + + PL L
Sbjct: 9 LLQSPARLGLP-TPSSPSLQNPIAPPKFSSQVSQHLQPHQQANILTTTTTSSTLLPL--L 65
Query: 368 PPYERAHALLNELAGLTTRLFEVSNNKAAWQMSYRSNLPKFLPEANIPKEALEAKTTREV 547
PP RA LL +++ L++RLFEVS N++ W ++R + P FLP A + +++E+
Sbjct: 66 PPLSRAQCLLIQMSSLSSRLFEVSANRSHWLSAFRGSFPSFLPSAAPVPQDSYPSSSKEI 125
Query: 548 LNIAETRQNMLIDAVTEILDLQXXXXXXXXXXXXXASKDIAMRKFAKKLREAQLVLEDTF 727
++ + Q L +AV E+ ++ S D A+ FA KL+ A+ VL++
Sbjct: 126 FSVFTSLQTQLFEAVAELQEILDLQDEKQKVTREIRSNDSAILAFANKLKGAERVLDNLV 185
Query: 728 DKFSEYKPSKRAKASSSVPKDGVA--AAELSLSDILSYAHKISYTTFAPPDFGADQAPLR 901
D +S+Y+ KR K + + + V A +L LSDILSYAH+ISYTTFAPP+FGA +APLR
Sbjct: 186 DDYSDYRRPKRVKLENDIDESSVTTVATQLKLSDILSYAHRISYTTFAPPEFGAGRAPLR 245
Query: 902 GAMAPAPQEEQMRASMLYQFADLDVGIPKTTTAETMPVAIIEXXXXXXXQATAVEA---- 1069
GA+ PAPQ+EQMRAS LY FA+LDVG+PKT + IIE T + A
Sbjct: 246 GALPPAPQDEQMRASQLYNFANLDVGLPKTDDDKE---KIIEPLIEPSADITNLSAIPGL 302
Query: 1070 -PPIPMLPPGWRPGMPVDLSXXXXXXXXXXGWKPGDPVPMPSIPPVGLKPEIAATKPPRA 1246
PP ++P GW+PGMPV+L GWKPGDP+ +P + + L PP+
Sbjct: 303 IPPNIIVPSGWKPGMPVEL--PTDLPLPPPGWKPGDPIALPPVDSLPL--------PPKV 352
Query: 1247 EEXXXXXXXXXXXXRGLQNQPIQVKFVNLDI 1339
EE R +PIQV+ V LDI
Sbjct: 353 EEAPARPVPPPGLPR--MPEPIQVRHVQLDI 381
>XP_009598014.1 PREDICTED: mediator of RNA polymerase II transcription subunit 4-like
[Nicotiana tomentosiformis]
Length = 398
Score = 230 bits (587), Expect = 2e-66
Identities = 149/399 (37%), Positives = 210/399 (52%), Gaps = 24/399 (6%)
Frame = +2
Query: 215 MLPSPGRLGGPGIPLQPAT---------SSALQRXXXXXXXXXXXXXVEVAHRVRPLEKL 367
+L SP RLG P P P+ SS + + + + PL L
Sbjct: 9 LLQSPARLGLP-TPSSPSVQNPSPPPKFSSQVSQPHQPLQQSNMLTTTTTSSALLPL--L 65
Query: 368 PPYERAHALLNELAGLTTRLFEVSNNKAAWQMSYRSNLPKFLPEAN-IPKEALEAKTTRE 544
PP RA +LL ++A L +RLFEVS N++ W ++R + P FLP +P+++ + +++E
Sbjct: 66 PPLSRAQSLLIQMASLASRLFEVSPNRSHWLGAFRGSFPSFLPSGTPVPQDSFPS-SSKE 124
Query: 545 VLNIAETRQNMLIDAVTEILDLQXXXXXXXXXXXXXASKDIAMRKFAKKLREAQLVLEDT 724
+L++ + Q L +AV E+ ++ SKD ++ FA KL+EA+ VL+
Sbjct: 125 ILSVFTSLQTQLFEAVAELQEILDLQDEKQKVIREIRSKDSSILAFANKLKEAERVLDML 184
Query: 725 FDKFSEYKPSKRAKASSSVPKDGVAAA-ELSLSDILSYAHKISYTTFAPPDFGADQAPLR 901
D +S+Y+ KRAK + + V A +L LSDILSYAH+ISYTTFAPP+FG QAPLR
Sbjct: 185 VDDYSDYRRPKRAKLENDTEESSVTVATQLKLSDILSYAHRISYTTFAPPEFGTGQAPLR 244
Query: 902 GAMAPAPQEEQMRASMLYQFADLDVGIPKT-------------TTAETMPVAIIEXXXXX 1042
GA+ PAPQ+EQMRAS LY F+DLDVG+PKT AET P+A I+
Sbjct: 245 GALPPAPQDEQMRASQLYNFSDLDVGLPKTDDDKETIIEPLLEPPAETNPLANIQGL--- 301
Query: 1043 XXQATAVEAPPIPMLPPGWRPGMPVDLSXXXXXXXXXXGWKPGDPVPMPSIPPVGLKPEI 1222
P ++P GW+PGMP++L GWKPGDP+ +P + L
Sbjct: 302 --------ITPNIVVPFGWKPGMPIEL--PTDLPLPPPGWKPGDPIALPPFDSLPL---- 347
Query: 1223 AATKPPRAEEXXXXXXXXXXXXRGLQNQPIQVKFVNLDI 1339
PP+ EE R +PIQV+ V LDI
Sbjct: 348 ----PPKVEEAPARPVPPPGLPR--MPEPIQVRHVQLDI 380
>XP_019238085.1 PREDICTED: mediator of RNA polymerase II transcription subunit 4-like
[Nicotiana attenuata] XP_019238086.1 PREDICTED: mediator
of RNA polymerase II transcription subunit 4-like
[Nicotiana attenuata] OIT21974.1 mediator of rna
polymerase ii transcription subunit 4 [Nicotiana
attenuata]
Length = 399
Score = 230 bits (587), Expect = 2e-66
Identities = 151/400 (37%), Positives = 210/400 (52%), Gaps = 25/400 (6%)
Frame = +2
Query: 215 MLPSPGRLGGPGIPLQPAT---------SSALQRXXXXXXXXXXXXXVEVAHRVRPLEKL 367
+L SP RLG P P P+ SS + + + + PL L
Sbjct: 9 LLQSPARLGLP-TPSSPSVQNPNPPPKFSSQVSQPNQPLQQANILTTTTTSSTLLPL--L 65
Query: 368 PPYERAHALLNELAGLTTRLFEVSNNKAAWQMSYRSNLPKFLPEAN-IPKEALEAKTTRE 544
PP RA +LL ++A L +RLFEVS N + W ++R + P FLP A +P+++ + +++E
Sbjct: 66 PPLSRAQSLLIQMASLASRLFEVSPNGSHWLSAFRGSFPSFLPSATPVPQDSFPS-SSKE 124
Query: 545 VLNIAETRQNMLIDAVTEILDLQXXXXXXXXXXXXXASKDIAMRKFAKKLREAQLVLEDT 724
+L++ + Q L +AV E+ ++ SKD ++ FA KL+EA+ VL+
Sbjct: 125 ILSVFTSLQTQLFEAVAELQEILDLQDEKQKVIREIRSKDSSILAFANKLKEAERVLDML 184
Query: 725 FDKFSEYKPSKRAKASSSVPKDGVA--AAELSLSDILSYAHKISYTTFAPPDFGADQAPL 898
D +S+Y+ KRAK + + V A +L LSDILSYAH+ISYTTFAPP+FGA QAPL
Sbjct: 185 VDDYSDYRRPKRAKLENDTEESSVTTVATQLKLSDILSYAHRISYTTFAPPEFGAGQAPL 244
Query: 899 RGAMAPAPQEEQMRASMLYQFADLDVGIPK-------------TTTAETMPVAIIEXXXX 1039
RGA+ PAPQ+EQMRAS LY FADLDVG+PK AET P+A I+
Sbjct: 245 RGALPPAPQDEQMRASQLYNFADLDVGLPKLDEGKEKIIEPLIEPPAETNPLANIQGL-- 302
Query: 1040 XXXQATAVEAPPIPMLPPGWRPGMPVDLSXXXXXXXXXXGWKPGDPVPMPSIPPVGLKPE 1219
P ++P GW+PGMPV+L GWKPGDP+ +P + L P+
Sbjct: 303 ---------ITPNIVVPSGWKPGMPVEL--PSDLPFPPPGWKPGDPIALPPFDSLPLHPK 351
Query: 1220 IAATKPPRAEEXXXXXXXXXXXXRGLQNQPIQVKFVNLDI 1339
+ EE R +PIQV+ V LDI
Sbjct: 352 V--------EEAPARPVPPPGLPR--MPEPIQVRHVQLDI 381
>XP_016450083.1 PREDICTED: mediator of RNA polymerase II transcription subunit 4-like
[Nicotiana tabacum]
Length = 399
Score = 230 bits (587), Expect = 2e-66
Identities = 147/389 (37%), Positives = 209/389 (53%), Gaps = 14/389 (3%)
Frame = +2
Query: 215 MLPSPGRLGGPGIPLQPAT---------SSALQRXXXXXXXXXXXXXVEVAHRVRPLEKL 367
+L SP RLG P P P+ SS + + + + PL L
Sbjct: 9 LLQSPARLGLP-TPSSPSVQNPSPPPKFSSQVSQPHQPLQQSNMLTTTTTSSALLPL--L 65
Query: 368 PPYERAHALLNELAGLTTRLFEVSNNKAAWQMSYRSNLPKFLPEAN-IPKEALEAKTTRE 544
PP RA +LL ++A L +RLFEVS N++ W ++R + P FLP +P+++ + +++E
Sbjct: 66 PPLSRAQSLLIQMASLASRLFEVSPNRSHWLGAFRGSFPSFLPSGTPVPQDSFPS-SSKE 124
Query: 545 VLNIAETRQNMLIDAVTEILDLQXXXXXXXXXXXXXASKDIAMRKFAKKLREAQLVLEDT 724
+L++ + Q L +AV E+ ++ SKD ++ FA KL+EA+ VL+
Sbjct: 125 ILSVFTSLQTQLFEAVAELQEILDLQDEKQKVIREIRSKDSSILAFANKLKEAERVLDML 184
Query: 725 FDKFSEYKPSKRAKASSSVPKDGVA--AAELSLSDILSYAHKISYTTFAPPDFGADQAPL 898
D +S+Y+ KRAK + + V A +L LSDILSYAH+ISYTTFAPP+FG QAPL
Sbjct: 185 VDDYSDYRRPKRAKLENDTEESSVTTVATQLKLSDILSYAHRISYTTFAPPEFGTGQAPL 244
Query: 899 RGAMAPAPQEEQMRASMLYQFADLDVGIPKTTTA-ETMPVAIIEXXXXXXXQATAVE-AP 1072
RGA+ PAPQ+EQMRAS LY F+DLDVG+PKT ET+ ++E A
Sbjct: 245 RGALPPAPQDEQMRASQLYNFSDLDVGLPKTDDGKETIIEPLLEPPAETNPLANIQGLIT 304
Query: 1073 PIPMLPPGWRPGMPVDLSXXXXXXXXXXGWKPGDPVPMPSIPPVGLKPEIAATKPPRAEE 1252
P ++P GW+PGMP++L GWKPGDP+ +P + L PP+ EE
Sbjct: 305 PNIVVPFGWKPGMPIEL--PTDLPLPPPGWKPGDPIALPPFDSLPL--------PPKVEE 354
Query: 1253 XXXXXXXXXXXXRGLQNQPIQVKFVNLDI 1339
R +PIQV+ V LDI
Sbjct: 355 APARPVPPPGLPR--MPEPIQVRHVQLDI 381
>XP_002273310.1 PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Vitis vinifera] XP_010653455.1 PREDICTED: mediator of
RNA polymerase II transcription subunit 4 [Vitis
vinifera]
Length = 414
Score = 230 bits (587), Expect = 3e-66
Identities = 141/347 (40%), Positives = 187/347 (53%), Gaps = 19/347 (5%)
Frame = +2
Query: 356 LEKLPPYERAHALLNELAGLTTRLFEVSNNKAAWQMSYRSNLPKFLPEANIPKEALEAK- 532
L LPP RA +LL ++A L +RLFEVS N++ W S+R LP FL +IP +
Sbjct: 60 LSLLPPLSRAQSLLLQMASLASRLFEVSPNRSLWLTSFRGTLPTFLSSQSIPPTPTPLEH 119
Query: 533 ---TTREVLNIAETRQNMLIDAVTEILDLQXXXXXXXXXXXXXASKDIAMRKFAKKLREA 703
+T+E+L++ + Q L +AV E+ ++ SKD A+ FA KL+EA
Sbjct: 120 SPSSTKEILSLFTSLQTQLFEAVAELQEILDLQDAKQKITREIRSKDSAILAFANKLKEA 179
Query: 704 QLVLEDTFDKFSEYKPSKRAKASSSVPKDG----VAAAELSLSDILSYAHKISYTTFAPP 871
+ VL+ D +S+Y+ KR+ + A++L+LSDILSYAH+ISYTTFAPP
Sbjct: 180 EAVLDILVDDYSDYRRPKRSNTADDSEDSSSCTTTVASQLNLSDILSYAHRISYTTFAPP 239
Query: 872 DFGADQAPLRGAMAPAPQEEQMRASMLYQFADLDVGIPKT---------TTAETMPVAII 1024
+FGA QAPLRGA+ PAPQEEQMRAS LY F+DLDVG+PK T E P
Sbjct: 240 EFGAGQAPLRGALPPAPQEEQMRASQLYNFSDLDVGLPKAVGIKEKTIETFIEPPPAQPA 299
Query: 1025 EXXXXXXXQATAVEAPPIPMLPPGWRPGMPVDLSXXXXXXXXXXGWKPGDPVPMPSIPPV 1204
+ + PP +P GW+PGMPV+L GWKPGDPVP+P + +
Sbjct: 300 DSNPLANLPSIQGLLPPNITVPSGWKPGMPVEL--PSLPIVPPPGWKPGDPVPLPPLESI 357
Query: 1205 GLKPEIAATKPPRAEEXXXXXXXXXXXXRGLQN--QPIQVKFVNLDI 1339
+ P RAEE GLQ +PI V V LDI
Sbjct: 358 PI--------PSRAEE----QLPRPLAAHGLQKAPEPIHVPHVQLDI 392
>XP_010267723.1 PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Nelumbo nucifera] XP_010267728.1 PREDICTED: mediator of
RNA polymerase II transcription subunit 4 [Nelumbo
nucifera]
Length = 427
Score = 231 bits (588), Expect = 3e-66
Identities = 144/346 (41%), Positives = 198/346 (57%), Gaps = 18/346 (5%)
Frame = +2
Query: 356 LEKLPPYERAHALLNELAGLTTRLFEVSNNKAAWQMSYRSNLPKFLPEANIPKEALEAKT 535
L LPP+ RA +LL ++A L TRLFEVS ++ W S+R +LP FLP + P ++ T
Sbjct: 72 LSLLPPHPRAQSLLLQMASLATRLFEVSPTRSFWLSSFRGSLPTFLP-SQTPLDS-SPST 129
Query: 536 TREVLNIAETRQNMLIDAVTEILDLQXXXXXXXXXXXXXASKDIAMRKFAKKLREAQLVL 715
T+E+L++ + Q L +AV E+ ++ +KD A+ FA KL+EA+ VL
Sbjct: 130 TKEILSLFTSLQTQLFEAVAELQEILDLQDAKQKISRDIRAKDAAILAFANKLKEAEHVL 189
Query: 716 EDTFDKFSEYKPSKRAKASSSV--PKDGVAAAE-------LSLSDILSYAHKISYTTFAP 868
+ D +S+Y KR+K ++S P++ + + L+LS+ILSYAH+ISYTTFAP
Sbjct: 190 DILVDDYSDYHRPKRSKPTTSEGNPENPPSYSSSTTITNPLNLSNILSYAHRISYTTFAP 249
Query: 869 PDFGADQAPLRGAMAPAPQEEQMRASMLYQFADLDVGIPKTT-TAETMPVAIIEXXXXXX 1045
P+FGA QAPLRGA+ PAPQEEQMRAS LY FADLDVG+PKT T E V +IE
Sbjct: 250 PEFGAGQAPLRGALPPAPQEEQMRASQLYNFADLDVGLPKTVETKEKTVVTLIEAPSLKP 309
Query: 1046 XQA------TAVEA--PPIPMLPPGWRPGMPVDLSXXXXXXXXXXGWKPGDPVPMPSIPP 1201
+ A++ PP +P GWRPGMPV+L GWKPGDPV +P +
Sbjct: 310 VETNPPIDLAAIQGLIPPQLTIPSGWRPGMPVEL--PADLPVPPPGWKPGDPVTLPPLDA 367
Query: 1202 VGLKPEIAATKPPRAEEXXXXXXXXXXXXRGLQNQPIQVKFVNLDI 1339
+ + P +PPR +PIQV++V LDI
Sbjct: 368 L-VGPNKGEDQPPRPAVSQMPPKAP---------EPIQVRYVQLDI 403
>XP_004306650.1 PREDICTED: mediator of RNA polymerase II transcription subunit 4-like
[Fragaria vesca subsp. vesca] XP_011468918.1 PREDICTED:
mediator of RNA polymerase II transcription subunit
4-like [Fragaria vesca subsp. vesca]
Length = 402
Score = 230 bits (586), Expect = 3e-66
Identities = 141/346 (40%), Positives = 200/346 (57%), Gaps = 21/346 (6%)
Frame = +2
Query: 365 LPPYERAHALLNELAGLTTRLFEVSNNKAAWQMSYRSNLPKFLPEAN--IPKEALEAK-- 532
LPP RA +LL ++A L ++LFEVS N++ W ++R +LP FLP + +P AL++
Sbjct: 56 LPPLPRAQSLLVQMASLASKLFEVSPNRSLWLNAFRGSLPTFLPSQSQSVPITALDSNPS 115
Query: 533 TTREVLNIAETRQNMLIDAVTEILDLQXXXXXXXXXXXXXASKDIAMRKFAKKLREAQLV 712
+T+++L Q L +AV E+ ++ SKD A+ F KKL++A+ +
Sbjct: 116 STKDILAQFTVLQTQLFEAVAELQEILDLQDSKLKIAREIRSKDAALLAFTKKLKDAEQI 175
Query: 713 LEDTFDKFSEYKPSKRAKASSSVPKDGVAA------AELSLSDILSYAHKISYTTFAPPD 874
L++ D +S+++ SKR K +D ++ ++L LSDILSYAH+ISYTTFAPPD
Sbjct: 176 LDNLVDDYSDFRCSKRPKQEEEDAEDEESSCTTTVTSKLKLSDILSYAHRISYTTFAPPD 235
Query: 875 FGADQAPLRGAMAPAPQEEQMRASMLYQFADLDVGIPKTTTAETMPV-AIIE----XXXX 1039
FGA QAPLRGA+ PAPQ+EQMRAS LY FA+LDVG+PKT +E AI+E
Sbjct: 236 FGAGQAPLRGALPPAPQDEQMRASQLYHFANLDVGLPKTVESEEKAFDAIMEPPPPQPTE 295
Query: 1040 XXXQATAVE----APPIPMLPPGWRPGMPVDLSXXXXXXXXXXGWKPGDPVPMPSIPPVG 1207
QA V PP +PPGW+PGMPV+L GWKPGDPVP+ ++ P+
Sbjct: 296 YNQQAGMVPFQGILPPNFTIPPGWKPGMPVEL--PTDLPPPPPGWKPGDPVPLDAL-PIH 352
Query: 1208 LKPEIAATKPPRAEEXXXXXXXXXXXXRGLQNQP--IQVKFVNLDI 1339
+ P++ A+ P +G+ P IQV+ V LDI
Sbjct: 353 VPPQVRASAP-----------------QGIHKPPATIQVQHVQLDI 381
>XP_011077385.1 PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Sesamum indicum] XP_011077386.1 PREDICTED: mediator of
RNA polymerase II transcription subunit 4 [Sesamum
indicum]
Length = 394
Score = 229 bits (585), Expect = 3e-66
Identities = 156/390 (40%), Positives = 210/390 (53%), Gaps = 15/390 (3%)
Frame = +2
Query: 215 MLPSPGRLGGPG-------IPLQPATSSALQRXXXXXXXXXXXXXVEVAHRVRPLEKLPP 373
++ SP RLG P P P SS Q+ V+ + PL LPP
Sbjct: 9 IVQSPARLGLPNPNSPSLQSPNPPKFSSQNQQTNHSHQSLNQLSTPAVSSTLLPL--LPP 66
Query: 374 YERAHALLNELAGLTTRLFEVSNNKAAWQMSYRSNLPKFLPEA--NIPKEALEAK--TTR 541
RA +LL ++A L ++LFEVS N+A W ++R +LP FL ++P + ++ + +
Sbjct: 67 LTRAQSLLLQMASLASKLFEVSPNRAHWISAFRGSLPSFLSSQTQSLPPASPDSSPSSAK 126
Query: 542 EVLNIAETRQNMLIDAVTEILDLQXXXXXXXXXXXXXASKDIAMRKFAKKLREAQLVLED 721
E+L T Q L +AV E+ ++ SKD A+ FA KL+EA+ +L+
Sbjct: 127 EILAQFNTLQTQLFEAVAELQEILDLQDAKQKLTREIRSKDSALLAFANKLKEAENILDI 186
Query: 722 TFDKFSEYKPSKRAKA---SSSVPKDGVAAAELSLSDILSYAHKISYTTFAPPDFGADQA 892
D +S+Y+ KR K+ + P VA +L LSDILSYAHKISYTTFAPP+FGA QA
Sbjct: 187 LVDDYSDYRRPKRTKSVNDAEDAPTTTVAT-QLKLSDILSYAHKISYTTFAPPEFGAGQA 245
Query: 893 PLRGAMAPAPQEEQMRASMLYQFADLDVGIPK-TTTAETMPVAIIEXXXXXXXQATAVEA 1069
PLRGA+ PAPQEEQMRAS LY FADLDVG+PK AE+ P+A I A
Sbjct: 246 PLRGALPPAPQEEQMRASQLYNFADLDVGLPKPALPAESNPLANI--------SAIQGLL 297
Query: 1070 PPIPMLPPGWRPGMPVDLSXXXXXXXXXXGWKPGDPVPMPSIPPVGLKPEIAATKPPRAE 1249
PP ++P GW+PGMPV+L GWKPGDP+ ++PP+ P P RA+
Sbjct: 298 PPNIVVPSGWKPGMPVEL-PSDLPILPPPGWKPGDPI---TLPPLDSLP-----APARAD 348
Query: 1250 EXXXXXXXXXXXXRGLQNQPIQVKFVNLDI 1339
E + +PIQV+ V LDI
Sbjct: 349 EQQLRPVPPPGLAKA--PEPIQVRHVQLDI 376
>ALO61893.1 mediator of RNA polymerase II transcription subunit 4 [Rehmannia
glutinosa]
Length = 398
Score = 229 bits (585), Expect = 3e-66
Identities = 148/386 (38%), Positives = 201/386 (52%), Gaps = 11/386 (2%)
Frame = +2
Query: 215 MLPSPGRLGGPGI-------PLQPATSSALQRXXXXXXXXXXXXXVEVAHRVRPLEKLPP 373
++ SP RLG P P P SS + V+ + PL LPP
Sbjct: 9 IVQSPARLGLPNPNSPSLQNPNPPKFSSQNPQTHQSSQPSNQLTTPPVSSTLLPL--LPP 66
Query: 374 YERAHALLNELAGLTTRLFEVSNNKAAWQMSYRSNLPKFLPEANIPKEALEAKTTREVLN 553
RA +LL ++A L+++LFEVS N++ W ++R +LP FL P + +E++
Sbjct: 67 LPRAQSLLLQMASLSSKLFEVSPNRSHWISAFRGSLPSFLSSQTQPVTP-SPSSAKEIIA 125
Query: 554 IAETRQNMLIDAVTEILDLQXXXXXXXXXXXXXASKDIAMRKFAKKLREAQLVLEDTFDK 733
Q L +AV E+ ++ +KD ++ FA KL+EA+ VL+ D
Sbjct: 126 QFTNLQTQLFEAVAELQEILDLQDAKQKLTREIRTKDSSLLTFANKLKEAERVLDILVDD 185
Query: 734 FSEYKPSKRAKASSSVPKDG---VAAAELSLSDILSYAHKISYTTFAPPDFGADQAPLRG 904
+S+Y+ KR+K++ + A +L LSDILSYAHK+SYTTFAPP+FGA QAPLRG
Sbjct: 186 YSDYRRIKRSKSTDGADESSSTTTVATQLKLSDILSYAHKVSYTTFAPPEFGAGQAPLRG 245
Query: 905 AMAPAPQEEQMRASMLYQFADLDVGIPKTTTA-ETMPVAIIEXXXXXXXQATAVEAPPIP 1081
A+ PAPQEEQMRAS LY FADLD+G+PKT E + ++E A P
Sbjct: 246 ALPPAPQEEQMRASQLYNFADLDIGLPKTDEGKEKIIEPLVETPAEINMSAIQGLIPSNI 305
Query: 1082 MLPPGWRPGMPVDLSXXXXXXXXXXGWKPGDPVPMPSIPPVGLKPEIAATKPPRAEEXXX 1261
++P GW+PGMPV+L GWKPGDPV +P P A PPRAEE
Sbjct: 306 VIPSGWKPGMPVEL-PSDLPILPPPGWKPGDPVTLP--------PLDALAGPPRAEEQQL 356
Query: 1262 XXXXXXXXXRGLQNQPIQVKFVNLDI 1339
G +PIQV+ V LDI
Sbjct: 357 RPIPPPGL--GKAPEPIQVRHVQLDI 380
>XP_009762237.1 PREDICTED: mediator of RNA polymerase II transcription subunit 4
[Nicotiana sylvestris]
Length = 399
Score = 229 bits (584), Expect = 5e-66
Identities = 148/399 (37%), Positives = 204/399 (51%), Gaps = 24/399 (6%)
Frame = +2
Query: 215 MLPSPGRLGGPGIPLQPAT---------SSALQRXXXXXXXXXXXXXVEVAHRVRPLEKL 367
+L SP RLG P P P+ SS + + + + PL L
Sbjct: 9 LLQSPARLGLP-TPSSPSLQNPTAPPKFSSQVSQHLQPHQQANILTTTTTSSTLLPL--L 65
Query: 368 PPYERAHALLNELAGLTTRLFEVSNNKAAWQMSYRSNLPKFLPEANIPKEALEAKTTREV 547
PP RA +LL ++A L++RLFEVS N++ W ++R + P FLP A + +++E
Sbjct: 66 PPLSRAQSLLIQMASLSSRLFEVSPNRSHWLSAFRGSFPSFLPSAAPVPQDSYPSSSKET 125
Query: 548 LNIAETRQNMLIDAVTEILDLQXXXXXXXXXXXXXASKDIAMRKFAKKLREAQLVLEDTF 727
L++ + Q L +AV E+ ++ S D A+ FA KL+ A+ VL++
Sbjct: 126 LSVFTSLQTQLFEAVAELQEILDLQDEKQKVTREIRSNDSAILAFANKLKGAERVLDNLV 185
Query: 728 DKFSEYKPSKRAKASSSVPKDGVA--AAELSLSDILSYAHKISYTTFAPPDFGADQAPLR 901
D +S+Y+ KR K + + + V A +L LSDILSYAH+ISYTTFAPP+FGA QAPLR
Sbjct: 186 DDYSDYRRPKRVKLENDIEESSVTTVATQLKLSDILSYAHRISYTTFAPPEFGAGQAPLR 245
Query: 902 GAMAPAPQEEQMRASMLYQFADLDVGIPK-------------TTTAETMPVAIIEXXXXX 1042
GA+ PAPQ+EQMRAS LY FADLDVG+PK ET P+A I+
Sbjct: 246 GALPPAPQDEQMRASQLYNFADLDVGLPKLDEGKEKIIEPLIEPAVETNPLANIQGL--- 302
Query: 1043 XXQATAVEAPPIPMLPPGWRPGMPVDLSXXXXXXXXXXGWKPGDPVPMPSIPPVGLKPEI 1222
P ++P GW+PGMPV+L GWKPGDP+ +P + L
Sbjct: 303 --------ITPNIVVPSGWKPGMPVEL--PTDLPLPPPGWKPGDPIALPPFDSLSL---- 348
Query: 1223 AATKPPRAEEXXXXXXXXXXXXRGLQNQPIQVKFVNLDI 1339
PP+ EE R +PIQV+ V LDI
Sbjct: 349 ----PPKVEEVPARPVPPPGLPR--MPEPIQVRHVQLDI 381