BLASTX nr result
ID: Ephedra29_contig00015215
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00015215
(813 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_019710613.1 PREDICTED: MMS19 nucleotide excision repair prote... 205 2e-56
XP_008810490.1 PREDICTED: MMS19 nucleotide excision repair prote... 197 6e-54
OMO70967.1 Armadillo-like helical [Corchorus capsularis] 185 3e-52
XP_018674227.1 PREDICTED: MMS19 nucleotide excision repair prote... 189 6e-51
XP_018674225.1 PREDICTED: MMS19 nucleotide excision repair prote... 189 7e-51
XP_012451237.1 PREDICTED: MMS19 nucleotide excision repair prote... 184 3e-49
KJB68183.1 hypothetical protein B456_010G230600 [Gossypium raimo... 184 3e-49
OMO66542.1 Armadillo-like helical [Corchorus olitorius] 184 3e-49
XP_012451236.1 PREDICTED: MMS19 nucleotide excision repair prote... 184 3e-49
XP_012451235.1 PREDICTED: MMS19 nucleotide excision repair prote... 184 3e-49
XP_010665895.1 PREDICTED: MMS19 nucleotide excision repair prote... 184 4e-49
XP_010665894.1 PREDICTED: MMS19 nucleotide excision repair prote... 184 4e-49
XP_019052369.1 PREDICTED: MMS19 nucleotide excision repair prote... 183 5e-49
XP_010249497.1 PREDICTED: MMS19 nucleotide excision repair prote... 183 5e-49
XP_017616107.1 PREDICTED: MMS19 nucleotide excision repair prote... 182 2e-48
XP_016725703.1 PREDICTED: MMS19 nucleotide excision repair prote... 182 2e-48
XP_017616106.1 PREDICTED: MMS19 nucleotide excision repair prote... 182 2e-48
XP_016725702.1 PREDICTED: MMS19 nucleotide excision repair prote... 182 2e-48
XP_017616105.1 PREDICTED: MMS19 nucleotide excision repair prote... 182 2e-48
XP_016725701.1 PREDICTED: MMS19 nucleotide excision repair prote... 182 2e-48
>XP_019710613.1 PREDICTED: MMS19 nucleotide excision repair protein homolog [Elaeis
guineensis]
Length = 1154
Score = 205 bits (521), Expect = 2e-56
Identities = 116/270 (42%), Positives = 170/270 (62%), Gaps = 1/270 (0%)
Frame = -3
Query: 811 AINLILNDGLLKI-INRNLSKDPTTPIGDNKISRKSNDIEECSIELQAVSAVSWVGKGLA 635
AI +IL LL + + NL K + +S S + AV ++W+GKGL
Sbjct: 850 AIEMILERSLLSVQSSSNLGKSDLLNKDERMLSCLCLLNNNSSFQSNAVVGLAWIGKGLL 909
Query: 634 MRGHEKISEIAMVLLGLMQTCSSSLSQYGSCKDDNNQMIEKRGSVSKAAAEGFRIIMRDS 455
MRGHEK+ EIAM+LL + S+ + S + ++ S++ +AA+ F +I+ DS
Sbjct: 910 MRGHEKVKEIAMLLLQYL--LSNPYKELHSDASGSGDSLDVHTSLATSAADAFHVILSDS 967
Query: 454 ENCLNRECHACIRPLFKQRFFTSMASVLILAIKNSLPSSPSRLILYCALAHLISEAPHVA 275
E CLN+ HA IRPL+KQRFF+SM VL+ +IK S SS R+ LY A AH+IS+AP A
Sbjct: 968 EVCLNKNFHAMIRPLYKQRFFSSMMPVLLSSIKQSCSSS-MRVALYRAFAHVISDAPLAA 1026
Query: 274 LMVECEKVLPFIIEGISSCRDDPLNKDILLSFLLAFSMIIMDDNKGKAVVLNNLSSSISC 95
++ E +K+LP +++ ++ +D LNKD++ S LL S I+MDDN GK ++ N+++ IS
Sbjct: 1027 VVAEAKKILPSLMDSLAMLSEDVLNKDLIYSLLLVLSGILMDDN-GKEAIIENINTVISD 1085
Query: 94 LVAVISYPHSMMVRETALQCLGAMVAFPYA 5
L+ +I YPH M+VRETA+QCL AM A P+A
Sbjct: 1086 LIRLIFYPHMMLVRETAIQCLVAMSALPHA 1115
>XP_008810490.1 PREDICTED: MMS19 nucleotide excision repair protein homolog [Phoenix
dactylifera]
Length = 1153
Score = 197 bits (502), Expect = 6e-54
Identities = 114/270 (42%), Positives = 169/270 (62%), Gaps = 1/270 (0%)
Frame = -3
Query: 811 AINLILNDGLLKI-INRNLSKDPTTPIGDNKISRKSNDIEECSIELQAVSAVSWVGKGLA 635
AI +IL LL I + NL K G+ +S + S + AV ++W+GKGL
Sbjct: 849 AIEMILERSLLSIQSSSNLGKSDLLNSGERMLSCLCLLNKNSSFQNNAVVGLAWIGKGLL 908
Query: 634 MRGHEKISEIAMVLLGLMQTCSSSLSQYGSCKDDNNQMIEKRGSVSKAAAEGFRIIMRDS 455
MRGHEK+ EIAM+LL + S+ + S + ++ S++ +AA+ F +I+ DS
Sbjct: 909 MRGHEKVKEIAMLLLKYL--LSNPYKELHSDVSGSGDGLDVHTSLATSAADAFHVILSDS 966
Query: 454 ENCLNRECHACIRPLFKQRFFTSMASVLILAIKNSLPSSPSRLILYCALAHLISEAPHVA 275
E CLN++ HA IRPL+KQRFF+SM VL+ +IK S S R+ L A AH+IS+AP A
Sbjct: 967 EVCLNKKFHATIRPLYKQRFFSSMMPVLLSSIKQS-RSLSMRVALCRAFAHVISDAPLAA 1025
Query: 274 LMVECEKVLPFIIEGISSCRDDPLNKDILLSFLLAFSMIIMDDNKGKAVVLNNLSSSISC 95
++ E +K++P +++ + +D LNKD++ S LL S I+MDDN GK ++ N+++ IS
Sbjct: 1026 VVAEAKKIVPSLMDSFAMLSEDVLNKDLIYSLLLVLSGILMDDN-GKEAIVENINTVISH 1084
Query: 94 LVAVISYPHSMMVRETALQCLGAMVAFPYA 5
L+ +I YPH M+VRETA+QCL AM P+A
Sbjct: 1085 LIRLIFYPHMMLVRETAIQCLVAMSGLPHA 1114
>OMO70967.1 Armadillo-like helical [Corchorus capsularis]
Length = 453
Score = 185 bits (470), Expect = 3e-52
Identities = 101/269 (37%), Positives = 161/269 (59%)
Frame = -3
Query: 811 AINLILNDGLLKIINRNLSKDPTTPIGDNKISRKSNDIEECSIELQAVSAVSWVGKGLAM 632
A+++IL L + S I + I+ S S+++ A+ ++WVGKGL M
Sbjct: 135 AMDMILKMSLWNFNGK--SSSDIQAISNGTINLASAAGSSTSLQIHAIVGLAWVGKGLLM 192
Query: 631 RGHEKISEIAMVLLGLMQTCSSSLSQYGSCKDDNNQMIEKRGSVSKAAAEGFRIIMRDSE 452
RGHEK+ +I M+ L ++ +L + +NN ++ SV K+AA+ F+I+M DSE
Sbjct: 193 RGHEKVKDITMIFLRCLELNGGALEEGAL---ENNYKLDLHQSVMKSAADAFQILMSDSE 249
Query: 451 NCLNRECHACIRPLFKQRFFTSMASVLILAIKNSLPSSPSRLILYCALAHLISEAPHVAL 272
CLNRE HA IRPL+KQRFF++M +L I S P SR +L A AH+I + P + +
Sbjct: 250 ACLNRELHAVIRPLYKQRFFSTMMPILQSIIMKSEPL--SRNLLLRAAAHIIIDTPLIVV 307
Query: 271 MVECEKVLPFIIEGISSCRDDPLNKDILLSFLLAFSMIIMDDNKGKAVVLNNLSSSISCL 92
+ + +K++P +++G+S+ +D +NKD++ LL S + D N G+ V +N + + CL
Sbjct: 308 LSDAKKIIPMLLDGLSASSNDTVNKDVIYGLLLVLSGALTDKN-GQEAVSDNAHTIVDCL 366
Query: 91 VAVISYPHSMMVRETALQCLGAMVAFPYA 5
+ +I YPH M+VRETA+QCL A+ +A
Sbjct: 367 IELIQYPHMMVVRETAIQCLVAISGLSHA 395
>XP_018674227.1 PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X2 [Musa acuminata subsp. malaccensis] XP_018674229.1
PREDICTED: MMS19 nucleotide excision repair protein
homolog isoform X2 [Musa acuminata subsp. malaccensis]
Length = 1006
Score = 189 bits (479), Expect = 6e-51
Identities = 102/226 (45%), Positives = 151/226 (66%), Gaps = 4/226 (1%)
Frame = -3
Query: 670 VSAVSWVGKGLAMRGHEKISEIAMVLLGLMQTCS----SSLSQYGSCKDDNNQMIEKRGS 503
V ++W+GKGL MRGHEK+ EIAM+LL + + Q+ + KD +
Sbjct: 747 VLGLAWIGKGLLMRGHEKLKEIAMLLLKCLVAGKYVDITPFQQHENGKDAGQ---DASSP 803
Query: 502 VSKAAAEGFRIIMRDSENCLNRECHACIRPLFKQRFFTSMASVLILAIKNSLPSSPSRLI 323
++ AA+ F + + DSE+CLN++ HA IRPL+KQRFF+SM +L+ +IK S PSS +++
Sbjct: 804 LATFAADAFHVFLSDSEDCLNKKFHATIRPLYKQRFFSSMLPILLSSIKESDPSS-KKVV 862
Query: 322 LYCALAHLISEAPHVALMVECEKVLPFIIEGISSCRDDPLNKDILLSFLLAFSMIIMDDN 143
LY A H+IS+ P A++ E +K++P + + ++ D LNKD++ S LL S I+MD+N
Sbjct: 863 LYRAFGHVISDTPLAAVVGEAKKIVPTLADALAMLSLDILNKDLIYSLLLVVSGILMDNN 922
Query: 142 KGKAVVLNNLSSSISCLVAVISYPHSMMVRETALQCLGAMVAFPYA 5
GKA+VL N+ + IS L+ +ISYPH M+VRETA+QCL A+ A PYA
Sbjct: 923 -GKAIVLENVHTIISLLIKLISYPHLMIVRETAIQCLVAISALPYA 967
>XP_018674225.1 PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X1 [Musa acuminata subsp. malaccensis] XP_018674226.1
PREDICTED: MMS19 nucleotide excision repair protein
homolog isoform X1 [Musa acuminata subsp. malaccensis]
Length = 1126
Score = 189 bits (479), Expect = 7e-51
Identities = 102/226 (45%), Positives = 151/226 (66%), Gaps = 4/226 (1%)
Frame = -3
Query: 670 VSAVSWVGKGLAMRGHEKISEIAMVLLGLMQTCS----SSLSQYGSCKDDNNQMIEKRGS 503
V ++W+GKGL MRGHEK+ EIAM+LL + + Q+ + KD +
Sbjct: 867 VLGLAWIGKGLLMRGHEKLKEIAMLLLKCLVAGKYVDITPFQQHENGKDAGQ---DASSP 923
Query: 502 VSKAAAEGFRIIMRDSENCLNRECHACIRPLFKQRFFTSMASVLILAIKNSLPSSPSRLI 323
++ AA+ F + + DSE+CLN++ HA IRPL+KQRFF+SM +L+ +IK S PSS +++
Sbjct: 924 LATFAADAFHVFLSDSEDCLNKKFHATIRPLYKQRFFSSMLPILLSSIKESDPSS-KKVV 982
Query: 322 LYCALAHLISEAPHVALMVECEKVLPFIIEGISSCRDDPLNKDILLSFLLAFSMIIMDDN 143
LY A H+IS+ P A++ E +K++P + + ++ D LNKD++ S LL S I+MD+N
Sbjct: 983 LYRAFGHVISDTPLAAVVGEAKKIVPTLADALAMLSLDILNKDLIYSLLLVVSGILMDNN 1042
Query: 142 KGKAVVLNNLSSSISCLVAVISYPHSMMVRETALQCLGAMVAFPYA 5
GKA+VL N+ + IS L+ +ISYPH M+VRETA+QCL A+ A PYA
Sbjct: 1043 -GKAIVLENVHTIISLLIKLISYPHLMIVRETAIQCLVAISALPYA 1087
>XP_012451237.1 PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X3 [Gossypium raimondii]
Length = 1040
Score = 184 bits (467), Expect = 3e-49
Identities = 104/274 (37%), Positives = 168/274 (61%), Gaps = 5/274 (1%)
Frame = -3
Query: 811 AINLILNDGLLKIINRNLS---KDPTTPIGDNKISRKSNDIEEC-SIELQAVSAVSWVGK 644
A+++ILN L I + N S + T + D ++ SN + C S+++ A+ ++W+GK
Sbjct: 726 AMDIILNLSLW-IFDTNSSSSIQSKTISVHDTGLNDLSNGVGSCNSLQIHAILGLAWIGK 784
Query: 643 GLAMRGHEKISEIAMVLLGLMQTCS-SSLSQYGSCKDDNNQMIEKRGSVSKAAAEGFRII 467
GL MRGHEK+++I MV L +Q+ + +S +NN ++ SV K AA+ F+I+
Sbjct: 785 GLLMRGHEKVNDITMVFLRCLQSSGRAGISHQEKSISENNYKLDLHNSVMKTAADAFQIL 844
Query: 466 MRDSENCLNRECHACIRPLFKQRFFTSMASVLILAIKNSLPSSPSRLILYCALAHLISEA 287
+ D E CLNRE HA IRPL+KQRFF+++ VL + P SR L+ A AH+I +
Sbjct: 845 IGDCEQCLNREFHAIIRPLYKQRFFSTIMPVLQSLVMKLEPL--SRSFLFRASAHVIIDT 902
Query: 286 PHVALMVECEKVLPFIIEGISSCRDDPLNKDILLSFLLAFSMIIMDDNKGKAVVLNNLSS 107
P + ++ + +KV+P +++G+S +D ++KD+L LL S I+MD N G+ V ++ +
Sbjct: 903 PLIVVLSDTKKVIPMLLDGLSVLSNDVVDKDVLYGLLLVLSGILMDKN-GQEAVSDSAHT 961
Query: 106 SISCLVAVISYPHSMMVRETALQCLGAMVAFPYA 5
++CLV + YPH +VRETA+QCL A+ +A
Sbjct: 962 VVNCLVDLTRYPHMTLVRETAMQCLIAISGLSHA 995
>KJB68183.1 hypothetical protein B456_010G230600 [Gossypium raimondii]
Length = 1063
Score = 184 bits (467), Expect = 3e-49
Identities = 104/274 (37%), Positives = 168/274 (61%), Gaps = 5/274 (1%)
Frame = -3
Query: 811 AINLILNDGLLKIINRNLS---KDPTTPIGDNKISRKSNDIEEC-SIELQAVSAVSWVGK 644
A+++ILN L I + N S + T + D ++ SN + C S+++ A+ ++W+GK
Sbjct: 749 AMDIILNLSLW-IFDTNSSSSIQSKTISVHDTGLNDLSNGVGSCNSLQIHAILGLAWIGK 807
Query: 643 GLAMRGHEKISEIAMVLLGLMQTCS-SSLSQYGSCKDDNNQMIEKRGSVSKAAAEGFRII 467
GL MRGHEK+++I MV L +Q+ + +S +NN ++ SV K AA+ F+I+
Sbjct: 808 GLLMRGHEKVNDITMVFLRCLQSSGRAGISHQEKSISENNYKLDLHNSVMKTAADAFQIL 867
Query: 466 MRDSENCLNRECHACIRPLFKQRFFTSMASVLILAIKNSLPSSPSRLILYCALAHLISEA 287
+ D E CLNRE HA IRPL+KQRFF+++ VL + P SR L+ A AH+I +
Sbjct: 868 IGDCEQCLNREFHAIIRPLYKQRFFSTIMPVLQSLVMKLEPL--SRSFLFRASAHVIIDT 925
Query: 286 PHVALMVECEKVLPFIIEGISSCRDDPLNKDILLSFLLAFSMIIMDDNKGKAVVLNNLSS 107
P + ++ + +KV+P +++G+S +D ++KD+L LL S I+MD N G+ V ++ +
Sbjct: 926 PLIVVLSDTKKVIPMLLDGLSVLSNDVVDKDVLYGLLLVLSGILMDKN-GQEAVSDSAHT 984
Query: 106 SISCLVAVISYPHSMMVRETALQCLGAMVAFPYA 5
++CLV + YPH +VRETA+QCL A+ +A
Sbjct: 985 VVNCLVDLTRYPHMTLVRETAMQCLIAISGLSHA 1018
>OMO66542.1 Armadillo-like helical [Corchorus olitorius]
Length = 1092
Score = 184 bits (467), Expect = 3e-49
Identities = 103/269 (38%), Positives = 164/269 (60%)
Frame = -3
Query: 811 AINLILNDGLLKIINRNLSKDPTTPIGDNKISRKSNDIEECSIELQAVSAVSWVGKGLAM 632
A+++IL L I N S D I + I+ S S++++A+ ++WVGKGL M
Sbjct: 797 AMDIILKMSLW-IFNGKSSSD-IQAISNGTINLASAAGSCTSLQIRAIVGLAWVGKGLLM 854
Query: 631 RGHEKISEIAMVLLGLMQTCSSSLSQYGSCKDDNNQMIEKRGSVSKAAAEGFRIIMRDSE 452
RGHEK+ +I M+ L ++ +L + +NN ++ +V K+AA+ F+I+M DSE
Sbjct: 855 RGHEKVKDITMIFLRCLELNGGALEEGAL---ENNYKLDLHQTVMKSAADAFQILMSDSE 911
Query: 451 NCLNRECHACIRPLFKQRFFTSMASVLILAIKNSLPSSPSRLILYCALAHLISEAPHVAL 272
CLNRE HA IRPL+KQRFF++M +L I S P SR +L A AH+I + P + +
Sbjct: 912 ACLNREFHAVIRPLYKQRFFSTMMPILQSMIMKSEPL--SRNLLLRAAAHIIIDTPLIVV 969
Query: 271 MVECEKVLPFIIEGISSCRDDPLNKDILLSFLLAFSMIIMDDNKGKAVVLNNLSSSISCL 92
+ + +K++P +++G+S+ +D +NKD++ LL S + D N G+ V +N + + CL
Sbjct: 970 LTDAKKMIPMLLDGLSALNNDTVNKDVIYGLLLVLSGALTDKN-GQEAVSDNAHTIVDCL 1028
Query: 91 VAVISYPHSMMVRETALQCLGAMVAFPYA 5
+ +I YPH M+VRETA+QCL A+ +A
Sbjct: 1029 IELIQYPHMMVVRETAIQCLVAISGLSHA 1057
>XP_012451236.1 PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X2 [Gossypium raimondii] KJB68181.1 hypothetical protein
B456_010G230600 [Gossypium raimondii]
Length = 1104
Score = 184 bits (467), Expect = 3e-49
Identities = 104/274 (37%), Positives = 168/274 (61%), Gaps = 5/274 (1%)
Frame = -3
Query: 811 AINLILNDGLLKIINRNLS---KDPTTPIGDNKISRKSNDIEEC-SIELQAVSAVSWVGK 644
A+++ILN L I + N S + T + D ++ SN + C S+++ A+ ++W+GK
Sbjct: 790 AMDIILNLSLW-IFDTNSSSSIQSKTISVHDTGLNDLSNGVGSCNSLQIHAILGLAWIGK 848
Query: 643 GLAMRGHEKISEIAMVLLGLMQTCS-SSLSQYGSCKDDNNQMIEKRGSVSKAAAEGFRII 467
GL MRGHEK+++I MV L +Q+ + +S +NN ++ SV K AA+ F+I+
Sbjct: 849 GLLMRGHEKVNDITMVFLRCLQSSGRAGISHQEKSISENNYKLDLHNSVMKTAADAFQIL 908
Query: 466 MRDSENCLNRECHACIRPLFKQRFFTSMASVLILAIKNSLPSSPSRLILYCALAHLISEA 287
+ D E CLNRE HA IRPL+KQRFF+++ VL + P SR L+ A AH+I +
Sbjct: 909 IGDCEQCLNREFHAIIRPLYKQRFFSTIMPVLQSLVMKLEPL--SRSFLFRASAHVIIDT 966
Query: 286 PHVALMVECEKVLPFIIEGISSCRDDPLNKDILLSFLLAFSMIIMDDNKGKAVVLNNLSS 107
P + ++ + +KV+P +++G+S +D ++KD+L LL S I+MD N G+ V ++ +
Sbjct: 967 PLIVVLSDTKKVIPMLLDGLSVLSNDVVDKDVLYGLLLVLSGILMDKN-GQEAVSDSAHT 1025
Query: 106 SISCLVAVISYPHSMMVRETALQCLGAMVAFPYA 5
++CLV + YPH +VRETA+QCL A+ +A
Sbjct: 1026 VVNCLVDLTRYPHMTLVRETAMQCLIAISGLSHA 1059
>XP_012451235.1 PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X1 [Gossypium raimondii] KJB68182.1 hypothetical protein
B456_010G230600 [Gossypium raimondii]
Length = 1152
Score = 184 bits (467), Expect = 3e-49
Identities = 104/274 (37%), Positives = 168/274 (61%), Gaps = 5/274 (1%)
Frame = -3
Query: 811 AINLILNDGLLKIINRNLS---KDPTTPIGDNKISRKSNDIEEC-SIELQAVSAVSWVGK 644
A+++ILN L I + N S + T + D ++ SN + C S+++ A+ ++W+GK
Sbjct: 838 AMDIILNLSLW-IFDTNSSSSIQSKTISVHDTGLNDLSNGVGSCNSLQIHAILGLAWIGK 896
Query: 643 GLAMRGHEKISEIAMVLLGLMQTCS-SSLSQYGSCKDDNNQMIEKRGSVSKAAAEGFRII 467
GL MRGHEK+++I MV L +Q+ + +S +NN ++ SV K AA+ F+I+
Sbjct: 897 GLLMRGHEKVNDITMVFLRCLQSSGRAGISHQEKSISENNYKLDLHNSVMKTAADAFQIL 956
Query: 466 MRDSENCLNRECHACIRPLFKQRFFTSMASVLILAIKNSLPSSPSRLILYCALAHLISEA 287
+ D E CLNRE HA IRPL+KQRFF+++ VL + P SR L+ A AH+I +
Sbjct: 957 IGDCEQCLNREFHAIIRPLYKQRFFSTIMPVLQSLVMKLEPL--SRSFLFRASAHVIIDT 1014
Query: 286 PHVALMVECEKVLPFIIEGISSCRDDPLNKDILLSFLLAFSMIIMDDNKGKAVVLNNLSS 107
P + ++ + +KV+P +++G+S +D ++KD+L LL S I+MD N G+ V ++ +
Sbjct: 1015 PLIVVLSDTKKVIPMLLDGLSVLSNDVVDKDVLYGLLLVLSGILMDKN-GQEAVSDSAHT 1073
Query: 106 SISCLVAVISYPHSMMVRETALQCLGAMVAFPYA 5
++CLV + YPH +VRETA+QCL A+ +A
Sbjct: 1074 VVNCLVDLTRYPHMTLVRETAMQCLIAISGLSHA 1107
>XP_010665895.1 PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X2 [Beta vulgaris subsp. vulgaris]
Length = 1011
Score = 184 bits (466), Expect = 4e-49
Identities = 103/273 (37%), Positives = 165/273 (60%), Gaps = 10/273 (3%)
Frame = -3
Query: 796 LNDGLLKIINRNLSKDPTTPIGDNKISRKSNDIEECS-------IELQAVSAVSWVGKGL 638
L+D L I+ R+L + + N S + +E C +++ +S ++W+GKGL
Sbjct: 708 LDDALTLILERSLGSCSDSFLSSN--SEMFDFVELCPSAADCVPLQVHYISGLAWIGKGL 765
Query: 637 AMRGHEKISEIAMVLLGLMQTCSSSLSQYGSCKDDNNQMIEKRGSV---SKAAAEGFRII 467
MRGHEK+ +I M+ L + + S S +N + EK + +K+AA+ F I+
Sbjct: 766 LMRGHEKLKDITMIFLRCLVSSSES-----EALTENKGLSEKEEVLPLLAKSAADAFHIL 820
Query: 466 MRDSENCLNRECHACIRPLFKQRFFTSMASVLILAIKNSLPSSPSRLILYCALAHLISEA 287
M DSE+CLNR HA RPL+KQRFF+++ +L+ A+K + R +LY A+ H+IS
Sbjct: 821 MSDSEDCLNRTFHATARPLYKQRFFSTVMPILLSAVKKT-HLHTVRSMLYRAIGHVISNT 879
Query: 286 PHVALMVECEKVLPFIIEGISSCRDDPLNKDILLSFLLAFSMIIMDDNKGKAVVLNNLSS 107
P A+++E +K+LP +++ IS +D LNKD++ + LL FS ++MD + GK + + N
Sbjct: 880 PLAAVVIETKKLLPVLLDAISLLSEDILNKDMIYNLLLVFSGLLMDKH-GKDIAVENAHV 938
Query: 106 SISCLVAVISYPHSMMVRETALQCLGAMVAFPY 8
I+CL ++SYPH M+VRETA+QCL A+ P+
Sbjct: 939 VINCLTGLLSYPHKMLVRETAIQCLVAVSVMPH 971
>XP_010665894.1 PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X1 [Beta vulgaris subsp. vulgaris] KMS96482.1
hypothetical protein BVRB_9g224750 [Beta vulgaris subsp.
vulgaris]
Length = 1139
Score = 184 bits (466), Expect = 4e-49
Identities = 103/273 (37%), Positives = 165/273 (60%), Gaps = 10/273 (3%)
Frame = -3
Query: 796 LNDGLLKIINRNLSKDPTTPIGDNKISRKSNDIEECS-------IELQAVSAVSWVGKGL 638
L+D L I+ R+L + + N S + +E C +++ +S ++W+GKGL
Sbjct: 836 LDDALTLILERSLGSCSDSFLSSN--SEMFDFVELCPSAADCVPLQVHYISGLAWIGKGL 893
Query: 637 AMRGHEKISEIAMVLLGLMQTCSSSLSQYGSCKDDNNQMIEKRGSV---SKAAAEGFRII 467
MRGHEK+ +I M+ L + + S S +N + EK + +K+AA+ F I+
Sbjct: 894 LMRGHEKLKDITMIFLRCLVSSSES-----EALTENKGLSEKEEVLPLLAKSAADAFHIL 948
Query: 466 MRDSENCLNRECHACIRPLFKQRFFTSMASVLILAIKNSLPSSPSRLILYCALAHLISEA 287
M DSE+CLNR HA RPL+KQRFF+++ +L+ A+K + R +LY A+ H+IS
Sbjct: 949 MSDSEDCLNRTFHATARPLYKQRFFSTVMPILLSAVKKT-HLHTVRSMLYRAIGHVISNT 1007
Query: 286 PHVALMVECEKVLPFIIEGISSCRDDPLNKDILLSFLLAFSMIIMDDNKGKAVVLNNLSS 107
P A+++E +K+LP +++ IS +D LNKD++ + LL FS ++MD + GK + + N
Sbjct: 1008 PLAAVVIETKKLLPVLLDAISLLSEDILNKDMIYNLLLVFSGLLMDKH-GKDIAVENAHV 1066
Query: 106 SISCLVAVISYPHSMMVRETALQCLGAMVAFPY 8
I+CL ++SYPH M+VRETA+QCL A+ P+
Sbjct: 1067 VINCLTGLLSYPHKMLVRETAIQCLVAVSVMPH 1099
>XP_019052369.1 PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X2 [Nelumbo nucifera]
Length = 1040
Score = 183 bits (465), Expect = 5e-49
Identities = 100/229 (43%), Positives = 147/229 (64%), Gaps = 3/229 (1%)
Frame = -3
Query: 685 IELQAVSAVSWVGKGLAMRGHEKISEIAMVLLG-LMQTCSSSLS--QYGSCKDDNNQMIE 515
++ + ++W+GKGL MRGHEK+ +I M LL L+ T ++ L Q+G +D+ Q +
Sbjct: 770 VQTNVLVGLAWIGKGLLMRGHEKVKDITMTLLRCLLSTINTELLPIQHGLSGNDSGQ--D 827
Query: 514 KRGSVSKAAAEGFRIIMRDSENCLNRECHACIRPLFKQRFFTSMASVLILAIKNSLPSSP 335
V K+AA+ F I+M DSE CLN+ HA +RPL+KQ FF+ M +L+ +I S SS
Sbjct: 828 MHPLVMKSAADAFHILMSDSEICLNKRFHATVRPLYKQHFFSIMMPILLSSITGS-DSSI 886
Query: 334 SRLILYCALAHLISEAPHVALMVECEKVLPFIIEGISSCRDDPLNKDILLSFLLAFSMII 155
+R LY A H+IS P VA++ EC+K++P +++ ++ D L+KD+ S LL S II
Sbjct: 887 TRSFLYRAFGHVISNTPLVAVITECKKLIPVLLDSLAVSSVDILDKDLTYSLLLVISGII 946
Query: 154 MDDNKGKAVVLNNLSSSISCLVAVISYPHSMMVRETALQCLGAMVAFPY 8
MD+N G+ V N I+CLV ++SYPH M+VRETA+QCL AM P+
Sbjct: 947 MDEN-GREAVTENAHIIINCLVGLLSYPHMMLVRETAIQCLVAMSGLPH 994
>XP_010249497.1 PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X1 [Nelumbo nucifera] XP_010249498.1 PREDICTED: MMS19
nucleotide excision repair protein homolog isoform X1
[Nelumbo nucifera]
Length = 1160
Score = 183 bits (465), Expect = 5e-49
Identities = 100/229 (43%), Positives = 147/229 (64%), Gaps = 3/229 (1%)
Frame = -3
Query: 685 IELQAVSAVSWVGKGLAMRGHEKISEIAMVLLG-LMQTCSSSLS--QYGSCKDDNNQMIE 515
++ + ++W+GKGL MRGHEK+ +I M LL L+ T ++ L Q+G +D+ Q +
Sbjct: 890 VQTNVLVGLAWIGKGLLMRGHEKVKDITMTLLRCLLSTINTELLPIQHGLSGNDSGQ--D 947
Query: 514 KRGSVSKAAAEGFRIIMRDSENCLNRECHACIRPLFKQRFFTSMASVLILAIKNSLPSSP 335
V K+AA+ F I+M DSE CLN+ HA +RPL+KQ FF+ M +L+ +I S SS
Sbjct: 948 MHPLVMKSAADAFHILMSDSEICLNKRFHATVRPLYKQHFFSIMMPILLSSITGS-DSSI 1006
Query: 334 SRLILYCALAHLISEAPHVALMVECEKVLPFIIEGISSCRDDPLNKDILLSFLLAFSMII 155
+R LY A H+IS P VA++ EC+K++P +++ ++ D L+KD+ S LL S II
Sbjct: 1007 TRSFLYRAFGHVISNTPLVAVITECKKLIPVLLDSLAVSSVDILDKDLTYSLLLVISGII 1066
Query: 154 MDDNKGKAVVLNNLSSSISCLVAVISYPHSMMVRETALQCLGAMVAFPY 8
MD+N G+ V N I+CLV ++SYPH M+VRETA+QCL AM P+
Sbjct: 1067 MDEN-GREAVTENAHIIINCLVGLLSYPHMMLVRETAIQCLVAMSGLPH 1114
>XP_017616107.1 PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X3 [Gossypium arboreum]
Length = 1040
Score = 182 bits (461), Expect = 2e-48
Identities = 100/274 (36%), Positives = 169/274 (61%), Gaps = 5/274 (1%)
Frame = -3
Query: 811 AINLILNDGLLKIINRNLS---KDPTTPIGDNKISRKSNDIEEC-SIELQAVSAVSWVGK 644
A+++ILN L I ++N S + + D ++ SN + C S+++ A+ ++W+GK
Sbjct: 726 AMDIILNLSLW-IFDKNSSSSIQSKMISVHDTALNDLSNGVGSCTSLQIHAILGLAWIGK 784
Query: 643 GLAMRGHEKISEIAMVLLGLMQTCS-SSLSQYGSCKDDNNQMIEKRGSVSKAAAEGFRII 467
GL MRGHEK+++I M+ L +Q+ + +S +NN ++ SV K AA+ F+I+
Sbjct: 785 GLLMRGHEKVNDITMIFLQCLQSSGRAGISHQEKSISENNYKLDLHNSVMKTAADAFQIL 844
Query: 466 MRDSENCLNRECHACIRPLFKQRFFTSMASVLILAIKNSLPSSPSRLILYCALAHLISEA 287
+ D E CLNRE HA IRPL+KQRFF+++ VL + P SR L+ A AH+I +
Sbjct: 845 IGDCEQCLNREFHAIIRPLYKQRFFSAIMPVLQSLVMKLEPL--SRSFLFRASAHVIIDT 902
Query: 286 PHVALMVECEKVLPFIIEGISSCRDDPLNKDILLSFLLAFSMIIMDDNKGKAVVLNNLSS 107
P + ++ + +K++P +++G+S+ +D ++K++L LL S I+MD N G+ V ++ +
Sbjct: 903 PLIVVLSDTKKIIPMLLDGLSALSNDVVDKEVLYGLLLVMSGILMDKN-GQEAVSDSAHT 961
Query: 106 SISCLVAVISYPHSMMVRETALQCLGAMVAFPYA 5
++CLV + YPH +VRETA+QCL A+ +A
Sbjct: 962 VVNCLVDLTRYPHMTLVRETAVQCLIAISGLSHA 995
>XP_016725703.1 PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X3 [Gossypium hirsutum]
Length = 1042
Score = 182 bits (461), Expect = 2e-48
Identities = 100/274 (36%), Positives = 169/274 (61%), Gaps = 5/274 (1%)
Frame = -3
Query: 811 AINLILNDGLLKIINRNLS---KDPTTPIGDNKISRKSNDIEEC-SIELQAVSAVSWVGK 644
A+++ILN L I ++N S + + D ++ SN + C S+++ A+ ++W+GK
Sbjct: 728 AMDIILNLSLW-IFDKNSSSSIQSKMISVHDTALNDLSNGVGSCTSLQIHAILGLAWIGK 786
Query: 643 GLAMRGHEKISEIAMVLLGLMQTCS-SSLSQYGSCKDDNNQMIEKRGSVSKAAAEGFRII 467
GL MRGHEK+++I M+ L +Q+ + +S +NN ++ SV K AA+ F+I+
Sbjct: 787 GLLMRGHEKVNDITMIFLQCLQSSGRAGISHQEKSISENNYKLDLHNSVMKTAADAFQIL 846
Query: 466 MRDSENCLNRECHACIRPLFKQRFFTSMASVLILAIKNSLPSSPSRLILYCALAHLISEA 287
+ D E CLNRE HA IRPL+KQRFF+++ VL + P SR L+ A AH+I +
Sbjct: 847 IGDCEQCLNREFHAIIRPLYKQRFFSAIMPVLQSLVMKLEPL--SRSFLFRASAHVIIDT 904
Query: 286 PHVALMVECEKVLPFIIEGISSCRDDPLNKDILLSFLLAFSMIIMDDNKGKAVVLNNLSS 107
P + ++ + +K++P +++G+S+ +D ++K++L LL S I+MD N G+ V ++ +
Sbjct: 905 PLIVVLSDTKKIIPMLLDGLSALSNDVVDKEVLYGLLLVLSGILMDKN-GQEAVSDSAHT 963
Query: 106 SISCLVAVISYPHSMMVRETALQCLGAMVAFPYA 5
++CLV + YPH +VRETA+QCL A+ +A
Sbjct: 964 VVNCLVDLTRYPHMTLVRETAVQCLIAISGLSHA 997
>XP_017616106.1 PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X2 [Gossypium arboreum]
Length = 1104
Score = 182 bits (461), Expect = 2e-48
Identities = 100/274 (36%), Positives = 169/274 (61%), Gaps = 5/274 (1%)
Frame = -3
Query: 811 AINLILNDGLLKIINRNLS---KDPTTPIGDNKISRKSNDIEEC-SIELQAVSAVSWVGK 644
A+++ILN L I ++N S + + D ++ SN + C S+++ A+ ++W+GK
Sbjct: 790 AMDIILNLSLW-IFDKNSSSSIQSKMISVHDTALNDLSNGVGSCTSLQIHAILGLAWIGK 848
Query: 643 GLAMRGHEKISEIAMVLLGLMQTCS-SSLSQYGSCKDDNNQMIEKRGSVSKAAAEGFRII 467
GL MRGHEK+++I M+ L +Q+ + +S +NN ++ SV K AA+ F+I+
Sbjct: 849 GLLMRGHEKVNDITMIFLQCLQSSGRAGISHQEKSISENNYKLDLHNSVMKTAADAFQIL 908
Query: 466 MRDSENCLNRECHACIRPLFKQRFFTSMASVLILAIKNSLPSSPSRLILYCALAHLISEA 287
+ D E CLNRE HA IRPL+KQRFF+++ VL + P SR L+ A AH+I +
Sbjct: 909 IGDCEQCLNREFHAIIRPLYKQRFFSAIMPVLQSLVMKLEPL--SRSFLFRASAHVIIDT 966
Query: 286 PHVALMVECEKVLPFIIEGISSCRDDPLNKDILLSFLLAFSMIIMDDNKGKAVVLNNLSS 107
P + ++ + +K++P +++G+S+ +D ++K++L LL S I+MD N G+ V ++ +
Sbjct: 967 PLIVVLSDTKKIIPMLLDGLSALSNDVVDKEVLYGLLLVMSGILMDKN-GQEAVSDSAHT 1025
Query: 106 SISCLVAVISYPHSMMVRETALQCLGAMVAFPYA 5
++CLV + YPH +VRETA+QCL A+ +A
Sbjct: 1026 VVNCLVDLTRYPHMTLVRETAVQCLIAISGLSHA 1059
>XP_016725702.1 PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X2 [Gossypium hirsutum]
Length = 1106
Score = 182 bits (461), Expect = 2e-48
Identities = 100/274 (36%), Positives = 169/274 (61%), Gaps = 5/274 (1%)
Frame = -3
Query: 811 AINLILNDGLLKIINRNLS---KDPTTPIGDNKISRKSNDIEEC-SIELQAVSAVSWVGK 644
A+++ILN L I ++N S + + D ++ SN + C S+++ A+ ++W+GK
Sbjct: 792 AMDIILNLSLW-IFDKNSSSSIQSKMISVHDTALNDLSNGVGSCTSLQIHAILGLAWIGK 850
Query: 643 GLAMRGHEKISEIAMVLLGLMQTCS-SSLSQYGSCKDDNNQMIEKRGSVSKAAAEGFRII 467
GL MRGHEK+++I M+ L +Q+ + +S +NN ++ SV K AA+ F+I+
Sbjct: 851 GLLMRGHEKVNDITMIFLQCLQSSGRAGISHQEKSISENNYKLDLHNSVMKTAADAFQIL 910
Query: 466 MRDSENCLNRECHACIRPLFKQRFFTSMASVLILAIKNSLPSSPSRLILYCALAHLISEA 287
+ D E CLNRE HA IRPL+KQRFF+++ VL + P SR L+ A AH+I +
Sbjct: 911 IGDCEQCLNREFHAIIRPLYKQRFFSAIMPVLQSLVMKLEPL--SRSFLFRASAHVIIDT 968
Query: 286 PHVALMVECEKVLPFIIEGISSCRDDPLNKDILLSFLLAFSMIIMDDNKGKAVVLNNLSS 107
P + ++ + +K++P +++G+S+ +D ++K++L LL S I+MD N G+ V ++ +
Sbjct: 969 PLIVVLSDTKKIIPMLLDGLSALSNDVVDKEVLYGLLLVLSGILMDKN-GQEAVSDSAHT 1027
Query: 106 SISCLVAVISYPHSMMVRETALQCLGAMVAFPYA 5
++CLV + YPH +VRETA+QCL A+ +A
Sbjct: 1028 VVNCLVDLTRYPHMTLVRETAVQCLIAISGLSHA 1061
>XP_017616105.1 PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X1 [Gossypium arboreum]
Length = 1152
Score = 182 bits (461), Expect = 2e-48
Identities = 100/274 (36%), Positives = 169/274 (61%), Gaps = 5/274 (1%)
Frame = -3
Query: 811 AINLILNDGLLKIINRNLS---KDPTTPIGDNKISRKSNDIEEC-SIELQAVSAVSWVGK 644
A+++ILN L I ++N S + + D ++ SN + C S+++ A+ ++W+GK
Sbjct: 838 AMDIILNLSLW-IFDKNSSSSIQSKMISVHDTALNDLSNGVGSCTSLQIHAILGLAWIGK 896
Query: 643 GLAMRGHEKISEIAMVLLGLMQTCS-SSLSQYGSCKDDNNQMIEKRGSVSKAAAEGFRII 467
GL MRGHEK+++I M+ L +Q+ + +S +NN ++ SV K AA+ F+I+
Sbjct: 897 GLLMRGHEKVNDITMIFLQCLQSSGRAGISHQEKSISENNYKLDLHNSVMKTAADAFQIL 956
Query: 466 MRDSENCLNRECHACIRPLFKQRFFTSMASVLILAIKNSLPSSPSRLILYCALAHLISEA 287
+ D E CLNRE HA IRPL+KQRFF+++ VL + P SR L+ A AH+I +
Sbjct: 957 IGDCEQCLNREFHAIIRPLYKQRFFSAIMPVLQSLVMKLEPL--SRSFLFRASAHVIIDT 1014
Query: 286 PHVALMVECEKVLPFIIEGISSCRDDPLNKDILLSFLLAFSMIIMDDNKGKAVVLNNLSS 107
P + ++ + +K++P +++G+S+ +D ++K++L LL S I+MD N G+ V ++ +
Sbjct: 1015 PLIVVLSDTKKIIPMLLDGLSALSNDVVDKEVLYGLLLVMSGILMDKN-GQEAVSDSAHT 1073
Query: 106 SISCLVAVISYPHSMMVRETALQCLGAMVAFPYA 5
++CLV + YPH +VRETA+QCL A+ +A
Sbjct: 1074 VVNCLVDLTRYPHMTLVRETAVQCLIAISGLSHA 1107
>XP_016725701.1 PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
X1 [Gossypium hirsutum]
Length = 1154
Score = 182 bits (461), Expect = 2e-48
Identities = 100/274 (36%), Positives = 169/274 (61%), Gaps = 5/274 (1%)
Frame = -3
Query: 811 AINLILNDGLLKIINRNLS---KDPTTPIGDNKISRKSNDIEEC-SIELQAVSAVSWVGK 644
A+++ILN L I ++N S + + D ++ SN + C S+++ A+ ++W+GK
Sbjct: 840 AMDIILNLSLW-IFDKNSSSSIQSKMISVHDTALNDLSNGVGSCTSLQIHAILGLAWIGK 898
Query: 643 GLAMRGHEKISEIAMVLLGLMQTCS-SSLSQYGSCKDDNNQMIEKRGSVSKAAAEGFRII 467
GL MRGHEK+++I M+ L +Q+ + +S +NN ++ SV K AA+ F+I+
Sbjct: 899 GLLMRGHEKVNDITMIFLQCLQSSGRAGISHQEKSISENNYKLDLHNSVMKTAADAFQIL 958
Query: 466 MRDSENCLNRECHACIRPLFKQRFFTSMASVLILAIKNSLPSSPSRLILYCALAHLISEA 287
+ D E CLNRE HA IRPL+KQRFF+++ VL + P SR L+ A AH+I +
Sbjct: 959 IGDCEQCLNREFHAIIRPLYKQRFFSAIMPVLQSLVMKLEPL--SRSFLFRASAHVIIDT 1016
Query: 286 PHVALMVECEKVLPFIIEGISSCRDDPLNKDILLSFLLAFSMIIMDDNKGKAVVLNNLSS 107
P + ++ + +K++P +++G+S+ +D ++K++L LL S I+MD N G+ V ++ +
Sbjct: 1017 PLIVVLSDTKKIIPMLLDGLSALSNDVVDKEVLYGLLLVLSGILMDKN-GQEAVSDSAHT 1075
Query: 106 SISCLVAVISYPHSMMVRETALQCLGAMVAFPYA 5
++CLV + YPH +VRETA+QCL A+ +A
Sbjct: 1076 VVNCLVDLTRYPHMTLVRETAVQCLIAISGLSHA 1109