BLASTX nr result

ID: Ephedra29_contig00015106 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00015106
         (519 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_001780388.1 predicted protein [Physcomitrella patens] AAL8417...    67   6e-10
AAT85662.1 polyunsaturated fatty acid elongase [Marchantia polym...    55   5e-06

>XP_001780388.1 predicted protein [Physcomitrella patens] AAL84174.1
           polyunsaturated fatty acid specific elongation enzyme 1
           [Physcomitrella patens] BAE71131.1 polyunsaturated fatty
           acid specific elongation enzyme 1 [Physcomitrella
           patens] EDQ54842.1 predicted protein [Physcomitrella
           patens]
          Length = 290

 Score = 66.6 bits (161), Expect = 6e-10
 Identities = 40/107 (37%), Positives = 60/107 (56%)
 Frame = +1

Query: 4   MVKEWYMGVDEKVGRWAKKAIEAKAGVELTSVPATRGLPTIDTPPVGMLVLASYLIIIGL 183
           +V+ +Y  +D KV +    A+    GVELT  P T+GLP +D+P   +L ++ YL I+  
Sbjct: 3   VVERFYGELDGKVSQGVN-ALLGSFGVELTDTPTTKGLPLVDSPTPIVLGVSVYLTIVIG 61

Query: 184 GTLHIRISGLKPRGANEPLFIRSIVXXXXXXXXXXXXYMCFGILFQA 324
           G L I+   LKPR A+EP  ++++V            YMC GI +QA
Sbjct: 62  GLLWIKARDLKPR-ASEPFLLQALVLVHNLFCFALSLYMCVGIAYQA 107


>AAT85662.1 polyunsaturated fatty acid elongase [Marchantia polymorpha]
          Length = 290

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
 Frame = +1

Query: 13  EWYMGVDEKVGRWAKKAIEA-KAGVELTSVPATRGLPTIDTPPVGMLVLASYLIIIGLGT 189
           E Y  VD  V +   + ++  + GV LT    T+GLP +D+P   +L L+SYL  + LG 
Sbjct: 2   EAYEMVDSFVSKTVFETLQRLRGGVVLTESAITKGLPCVDSPTPIVLGLSSYLTFVFLGL 61

Query: 190 LHIRISGLKPRGANEPLFIRSIVXXXXXXXXXXXXYMCFGILFQA 324
           + I+   LKPR + EP  +   V            YMC GI+ QA
Sbjct: 62  IVIKSLDLKPR-SKEPAILNLFVIFHNFVCFALSLYMCVGIVRQA 105


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