BLASTX nr result
ID: Ephedra29_contig00014598
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra29_contig00014598 (1273 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value KVG42498.1 RNA-dependent RNA polymerase, eukaryotic-type [Cynara... 531 e-178 AJA90762.1 RNA-dependent RNA polymerase 2 [Cycas revoluta] 531 e-176 KVG80506.1 RNA-dependent RNA polymerase, eukaryotic-type [Cynara... 530 e-175 AJP06345.1 RDR1 [Pinus tabuliformis] 542 e-175 KVI02971.1 RNA-dependent RNA polymerase, eukaryotic-type [Cynara... 529 e-175 AJA90786.1 RNA-dependent RNA polymerase 2 [Pinus canariensis] 523 e-173 XP_002284914.1 PREDICTED: probable RNA-dependent RNA polymerase ... 523 e-173 XP_002281315.1 PREDICTED: probable RNA-dependent RNA polymerase ... 520 e-172 XP_010275353.1 PREDICTED: probable RNA-dependent RNA polymerase ... 520 e-172 XP_006469265.1 PREDICTED: RNA-dependent RNA polymerase 1 isoform... 519 e-171 XP_015382841.1 PREDICTED: RNA-dependent RNA polymerase 1 isoform... 519 e-171 CAA09896.1 RNA-directed RNA polymerase, partial [Petunia x hybrida] 508 e-171 AJP06346.1 RDR2 [Pinus tabuliformis] 518 e-171 CDP05596.1 unnamed protein product [Coffea canephora] 517 e-171 XP_004498236.1 PREDICTED: probable RNA-dependent RNA polymerase ... 516 e-170 ABI34311.1 RNA dependent RNA polymerase family protein [Solanum ... 511 e-170 XP_019704930.1 PREDICTED: probable RNA-dependent RNA polymerase ... 511 e-170 ABO92978.1 putative RNA-dependent RNA-polymerase [Solanum tubero... 509 e-170 XP_003518619.1 PREDICTED: RNA-dependent RNA polymerase 1 [Glycin... 515 e-170 ABO93006.1 putative RNA-dependent RNA-polymerase [Solanum tubero... 513 e-170 >KVG42498.1 RNA-dependent RNA polymerase, eukaryotic-type [Cynara cardunculus var. scolymus] Length = 994 Score = 531 bits (1369), Expect = e-178 Identities = 263/424 (62%), Positives = 321/424 (75%) Frame = +1 Query: 1 GIVIGRKKFEFLAYSNSQLRESSLWMFASNEQVTAETIRAWMGNFLSIRNVAKCAARMGQ 180 GIVIGRKKFEFLA+S+SQLR++S WMFAS+ +TA IR WMG F SI+NVAK AAR+GQ Sbjct: 334 GIVIGRKKFEFLAFSSSQLRDNSAWMFASSNXLTAADIREWMGKFNSIKNVAKYAARLGQ 393 Query: 181 CFSSSKKTLCVYGSEVEDCMDITIERDSNRYVFSDGIGKISVALAEELAVHCGCDYVPSA 360 F SSK++L V EVE DI + R +YVFSDGIGKIS A +++ CG D++PSA Sbjct: 394 SFGSSKESLXVAPYEVEKIPDIEVVRGGTKYVFSDGIGKISXEFASXVSJKCGYDFIPSA 453 Query: 361 FQIRYGGYKGVVAMDPTSSYKLSLRPSMRKFDSENRNVDVLSWTKFRPCFLNRQIITLLS 540 FQIRYGGYKGVVA+DPTSS KLSLR SM KFDS+N +DVL+ +K++PC++NRQIITLLS Sbjct: 454 FQIRYGGYKGVVAIDPTSSKKLSLRTSMCKFDSDNTKLDVLAISKYQPCYMNRQIITLLS 513 Query: 541 TLGVRDQSFENLQEEDINRLDLILDRKDMALEVLQIMSGGENHDVIINMLRCGYSPKDEP 720 TLGVRD FE Q+E ++ LD IL A E L++MS GEN +++ ML CGY P EP Sbjct: 514 TLGVRDHVFEKKQKEAVDLLDAILREPMKAEEALELMSPGENTNILKEMLACGYKPNAEP 573 Query: 721 YLSMVLHAFRAAKLLELKHKARIFVLKGRCLMGCLDEYRILEYGEIFVQVTEPKSSLYFG 900 +LSM+L FRA KLLEL+ K R FV +GR +MGCLDE R LEYGE+FVQ + + + Sbjct: 574 FLSMMLQVFRATKLLELRTKTRXFVPRGRXMMGCLDETRTLEYGEVFVQFSGSRRRVLGD 633 Query: 901 TTGNQTSIRKRIITGTVIVAKNPCLHPGDVRILRAVDDPRLHHLVDCVVFPQKGKRPHPN 1080 +S RI+TG V+VAKNPCLHPGDVR+L AVD PRL H+VDCVVFPQKG RPHPN Sbjct: 634 DFSGGSSNSCRIVTGKVVVAKNPCLHPGDVRVLTAVDVPRLRHMVDCVVFPQKGHRPHPN 693 Query: 1081 ECSGSDLDGDLYFICWDKSLIPPEVDMPMDYTAPPPISLNRPVTIEDIQESFANYMLNDS 1260 ECSGSDLDGD+YF+CWD LIPP PMDYT P + L+ VTIE+++E F NY++NDS Sbjct: 694 ECSGSDLDGDIYFVCWDPDLIPPRQIEPMDYTPAPSMELDHDVTIEEVEEYFTNYIVNDS 753 Query: 1261 VGII 1272 +GII Sbjct: 754 LGII 757 >AJA90762.1 RNA-dependent RNA polymerase 2 [Cycas revoluta] Length = 1117 Score = 531 bits (1368), Expect = e-176 Identities = 267/429 (62%), Positives = 329/429 (76%), Gaps = 5/429 (1%) Frame = +1 Query: 1 GIVIGRKKFEFLAYSNSQLRESSLWMFASNEQVTAETIRAWMGNFLSIRNVAKCAARMGQ 180 GIVIG K+FEFLA+S SQLRE+S+WMFASN++V+ ++IR WMG F ++RN+AKCA+RMGQ Sbjct: 451 GIVIGNKRFEFLAFSASQLRENSVWMFASNDKVSVDSIRKWMGEFCNMRNIAKCASRMGQ 510 Query: 181 CFSSSKKTLCVYGSEVEDCMDITIERDSNRYVFSDGIGKISVALAEELAVHCGCDYVP-S 357 CFSSSK+T+ V EV DI I D RY FSDGIGKIS+ LA+++A CG P S Sbjct: 511 CFSSSKQTISVPEHEVLVIPDIEISSDGIRYCFSDGIGKISLQLAKQMASKCGLRMPPPS 570 Query: 358 AFQIRYGGYKGVVAMDPTSSYKLSLRPSMRKFDSENRNVDVLSWTKFRPCFLNRQIITLL 537 AFQIRYGGYKGVVA+DPTS KLSLRPSM KF+S+N +DV++W++F PCFLNR+IITLL Sbjct: 571 AFQIRYGGYKGVVAVDPTSFIKLSLRPSMLKFNSKNTMLDVINWSRFLPCFLNREIITLL 630 Query: 538 STLGVRDQSFENLQEEDINRLDLILDRKDMALEVLQIMSGGENHDVIINMLRCGYSPKDE 717 STLGV DQ+FE LQ++ I LD +L + AL+VLQIM GE+H +++ ML GYSP E Sbjct: 631 STLGVPDQNFEYLQKKTIEHLDHMLVSTERALDVLQIMCLGEDHRMLVEMLLGGYSPNTE 690 Query: 718 PYLSMVLHAFRAAKLLELKHKARIFVLKGRCLMGCLDEYRILEYGEIFVQVTEPKSSL-Y 894 PYLSM+L AFR +L +L+ K RIFV KGR LMGCLDE +L YGE+FVQV+ + Y Sbjct: 691 PYLSMMLQAFREYQLSDLRTKCRIFVSKGRVLMGCLDETEVLNYGEVFVQVSRINTKFCY 750 Query: 895 FGTTG---NQTSIRKRIITGTVIVAKNPCLHPGDVRILRAVDDPRLHHLVDCVVFPQKGK 1065 G ++ I+ G V+VAKNPCLHPGD+R+L AVD P LHH+VDC+VFPQKG+ Sbjct: 751 DGLASFGYDKWGKSNCIVQGKVVVAKNPCLHPGDIRLLHAVDVPGLHHMVDCLVFPQKGE 810 Query: 1066 RPHPNECSGSDLDGDLYFICWDKSLIPPEVDMPMDYTAPPPISLNRPVTIEDIQESFANY 1245 RPHPNECSGSDLDGDLYF+ WD+ LIPP+ D PMDY PI L+ VTIE+IQE F NY Sbjct: 811 RPHPNECSGSDLDGDLYFVSWDELLIPPDQDQPMDYVGRQPIQLDHEVTIEEIQEYFVNY 870 Query: 1246 MLNDSVGII 1272 MLNDS+G+I Sbjct: 871 MLNDSLGVI 879 >KVG80506.1 RNA-dependent RNA polymerase, eukaryotic-type [Cynara cardunculus var. scolymus] Length = 1137 Score = 530 bits (1365), Expect = e-175 Identities = 261/424 (61%), Positives = 322/424 (75%) Frame = +1 Query: 1 GIVIGRKKFEFLAYSNSQLRESSLWMFASNEQVTAETIRAWMGNFLSIRNVAKCAARMGQ 180 GIVIGRKKFEFLA+S+SQLR++S WMFAS+ +TA IR WMG F SI+NVAK AAR+GQ Sbjct: 467 GIVIGRKKFEFLAFSSSQLRDNSAWMFASSNILTAADIREWMGKFNSIKNVAKYAARLGQ 526 Query: 181 CFSSSKKTLCVYGSEVEDCMDITIERDSNRYVFSDGIGKISVALAEELAVHCGCDYVPSA 360 F SSK++L V EVE DI + R +YVFSDGIGKIS+ A +++ CG D++PSA Sbjct: 527 SFGSSKESLNVAPYEVEKIPDIEVVRGGTKYVFSDGIGKISLEFASSVSIKCGYDFIPSA 586 Query: 361 FQIRYGGYKGVVAMDPTSSYKLSLRPSMRKFDSENRNVDVLSWTKFRPCFLNRQIITLLS 540 FQIRYGGYKGVVA+DPTSS KLSLR SM KFDS+N +DVL+ +K++PC++NRQ+ITLLS Sbjct: 587 FQIRYGGYKGVVAIDPTSSKKLSLRTSMCKFDSDNTKLDVLAISKYQPCYMNRQJITLLS 646 Query: 541 TLGVRDQSFENLQEEDINRLDLILDRKDMALEVLQIMSGGENHDVIINMLRCGYSPKDEP 720 TLGVRD FE Q+E ++ L+ IL A E L++MS GEN +++ ML CGY P EP Sbjct: 647 TLGVRDHVFEKKQKEAVDLLNAILSEPMKAEEALELMSPGENTNILKEMLACGYKPNAEP 706 Query: 721 YLSMVLHAFRAAKLLELKHKARIFVLKGRCLMGCLDEYRILEYGEIFVQVTEPKSSLYFG 900 +LSM+L FRA KLLEL+ K R FV +GR +MGCLDE R LEYGE+FVQ + + + Sbjct: 707 FLSMMLQVFRATKLLELRTKTRXFVPRGRXMMGCLDETRTLEYGEVFVQFSGSRRRVLGD 766 Query: 901 TTGNQTSIRKRIITGTVIVAKNPCLHPGDVRILRAVDDPRLHHLVDCVVFPQKGKRPHPN 1080 +S RI+TG V+VAKNPCLHPGDVR+L AVD PRL H+VDCVVFPQKG RPHPN Sbjct: 767 DFSGGSSNSCRIVTGKVVVAKNPCLHPGDVRVLTAVDVPRLRHMVDCVVFPQKGHRPHPN 826 Query: 1081 ECSGSDLDGDLYFICWDKSLIPPEVDMPMDYTAPPPISLNRPVTIEDIQESFANYMLNDS 1260 ECSGSDLDGD+YF+CWD LIPP PMDYT P + L+ VTIE+++E F NY++NDS Sbjct: 827 ECSGSDLDGDIYFVCWDPDLIPPRQIEPMDYTPAPSMELDHDVTIEEVEEYFTNYIVNDS 886 Query: 1261 VGII 1272 +GII Sbjct: 887 LGII 890 >AJP06345.1 RDR1 [Pinus tabuliformis] Length = 1726 Score = 542 bits (1396), Expect = e-175 Identities = 270/422 (63%), Positives = 333/422 (78%), Gaps = 3/422 (0%) Frame = +1 Query: 1 GIVIGRKKFEFLAYSNSQLRESSLWMFASNEQVTAETIRAWMGNFLSIRNVAKCAARMGQ 180 GIVIG KKFEFLA+S+SQLRESSLWMFA + +TAE IR WMGNF +IRNVAKCA+RMGQ Sbjct: 695 GIVIGDKKFEFLAFSSSQLRESSLWMFAPTDTLTAEQIRKWMGNFWAIRNVAKCASRMGQ 754 Query: 181 CFSSSKKTLCVYGSEVEDC-MDITIERDSNRYVFSDGIGKISVALAEELAVHCGCD-YVP 354 FSSS +T + E E DI + + RYVFSDGIGKIS AE++A CGCD VP Sbjct: 755 SFSSSTETFDIQNEEFEYIPRDIEVVSNGKRYVFSDGIGKISSDFAEQVARKCGCDNLVP 814 Query: 355 SAFQIRYGGYKGVVAMDPTSSYKLSLRPSMRKFDSENRNVDVLSWTKFRPCFLNRQIITL 534 SAFQIR+ G+KG+VA+DP+SSYKLSLRPSMRK+ S+NR++DVL+WTK+RPCFLNRQIITL Sbjct: 815 SAFQIRFAGFKGMVAVDPSSSYKLSLRPSMRKYTSDNRSLDVLNWTKYRPCFLNRQIITL 874 Query: 535 LSTLGVRDQSFENLQEEDINRLDLILDRKDMALEVLQIMSGGENHDVIINMLRCGYSPKD 714 LSTLGV FE LQ+E I ++ +L +D AL+VLQ + GENH+ + +ML CGYSP+ Sbjct: 875 LSTLGVAGHHFETLQKEAIELINQVLTSRDEALDVLQTLYTGENHNALTDMLSCGYSPRS 934 Query: 715 EPYLSMVLHAFRAAKLLELKHKARIFVLKGRCLMGCLDEYRILEYGEIFVQVTE-PKSSL 891 EPYLSM+L AFRA+KL+EL++KARIFV KGRCLMGCLDE + L YGE+F+Q+ + P + Sbjct: 935 EPYLSMMLQAFRASKLVELRNKARIFVPKGRCLMGCLDETKTLNYGEVFIQIRDAPGNKQ 994 Query: 892 YFGTTGNQTSIRKRIITGTVIVAKNPCLHPGDVRILRAVDDPRLHHLVDCVVFPQKGKRP 1071 G ++TS I+ G V+VAKNPCLHPGD+RIL AV+ P+L H+VDC+VFPQ+GK P Sbjct: 995 LHGPGQDRTS----IMEGKVVVAKNPCLHPGDIRILFAVNTPKLKHMVDCIVFPQQGKGP 1050 Query: 1072 HPNECSGSDLDGDLYFICWDKSLIPPEVDMPMDYTAPPPISLNRPVTIEDIQESFANYML 1251 HPNECSGSDLDGD+YF+ WDKSLIPP+ PMDY A P L+R VT+E+IQE FANYM+ Sbjct: 1051 HPNECSGSDLDGDIYFVSWDKSLIPPQQVPPMDYDAKPLKQLDREVTMEEIQEHFANYMV 1110 Query: 1252 ND 1257 + Sbjct: 1111 TN 1112 >KVI02971.1 RNA-dependent RNA polymerase, eukaryotic-type [Cynara cardunculus var. scolymus] Length = 1167 Score = 529 bits (1363), Expect = e-175 Identities = 262/424 (61%), Positives = 322/424 (75%) Frame = +1 Query: 1 GIVIGRKKFEFLAYSNSQLRESSLWMFASNEQVTAETIRAWMGNFLSIRNVAKCAARMGQ 180 GIVIG KKFEFLA+S+SQLR++S WMFAS+ +TA IR WMG F SI+NVAK AAR+GQ Sbjct: 484 GIVIGCKKFEFLAFSSSQLRDNSTWMFASSNTLTAADIREWMGKFNSIKNVAKYAARLGQ 543 Query: 181 CFSSSKKTLCVYGSEVEDCMDITIERDSNRYVFSDGIGKISVALAEELAVHCGCDYVPSA 360 F SSK++L V EVE DI + R +YVFSDGIGKIS A +++ CG D++PSA Sbjct: 544 SFGSSKESLSVAPYEVEKIPDIEVVRGGTKYVFSDGIGKISXEFASRVSJKCGYDFIPSA 603 Query: 361 FQIRYGGYKGVVAMDPTSSYKLSLRPSMRKFDSENRNVDVLSWTKFRPCFLNRQIITLLS 540 FQIRYGGYKGVVA+DPTSS KLSLR SM KFDS+N +DVL+ +K++PC++NRQIITLLS Sbjct: 604 FQIRYGGYKGVVAIDPTSSKKLSLRTSMCKFDSDNTKLDVLAISKYQPCYMNRQIITLLS 663 Query: 541 TLGVRDQSFENLQEEDINRLDLILDRKDMALEVLQIMSGGENHDVIINMLRCGYSPKDEP 720 TLGVRD FE Q+E ++ L+ IL A E L++MS GEN +++ ML CGY P EP Sbjct: 664 TLGVRDHVFEKKQKEAVDLLNAILXEPMKAEEALELMSPGENTNILKEMLACGYKPNAEP 723 Query: 721 YLSMVLHAFRAAKLLELKHKARIFVLKGRCLMGCLDEYRILEYGEIFVQVTEPKSSLYFG 900 +LSM+L FRA KLLEL+ KARIFV +GR +MGCLDE R L YGE+FVQ + + + Sbjct: 724 FLSMMLQVFRATKLLELRTKARIFVPRGRSMMGCLDETRTLAYGEVFVQFSCSRRRVLGD 783 Query: 901 TTGNQTSIRKRIITGTVIVAKNPCLHPGDVRILRAVDDPRLHHLVDCVVFPQKGKRPHPN 1080 +S RI+TG V+VAKNPCLHPGDVR+LRAVD P+L H+VDCVVFPQKG RPHPN Sbjct: 784 DFSGGSSNSCRIVTGKVVVAKNPCLHPGDVRVLRAVDVPQLRHMVDCVVFPQKGHRPHPN 843 Query: 1081 ECSGSDLDGDLYFICWDKSLIPPEVDMPMDYTAPPPISLNRPVTIEDIQESFANYMLNDS 1260 ECSGSDLDGD+YF+CWD LIPP PMDYT P + L+ VTIE+++E F NY++NDS Sbjct: 844 ECSGSDLDGDIYFVCWDPDLIPPRQIEPMDYTPAPSVQLDHDVTIEEVEEYFTNYIVNDS 903 Query: 1261 VGII 1272 +GII Sbjct: 904 LGII 907 >AJA90786.1 RNA-dependent RNA polymerase 2 [Pinus canariensis] Length = 1114 Score = 523 bits (1348), Expect = e-173 Identities = 263/431 (61%), Positives = 330/431 (76%), Gaps = 7/431 (1%) Frame = +1 Query: 1 GIVIGRKKFEFLAYSNSQLRESSLWMFASNEQVTAETIRAWMGNFLSIRNVAKCAARMGQ 180 GIV+G+KKFEFLA+S SQLRE+SLWMF+ N++VTA++IR WMG+F +IRNVAKCAARMGQ Sbjct: 448 GIVVGKKKFEFLAFSASQLRENSLWMFSPNDKVTADSIRKWMGDFDNIRNVAKCAARMGQ 507 Query: 181 CFSSSKKTLCVYGSEVEDCMDITIERDSNRYVFSDGIGKISVALAEELAVHCGCDYV--P 354 FSSS++T V EV DI + D +Y FSDGIGKIS+ LA+++A CG + P Sbjct: 508 SFSSSRQTSNVQEHEVLIIPDIEVSTDGIKYCFSDGIGKISLPLAKQIAYKCGLSTIAPP 567 Query: 355 SAFQIRYGGYKGVVAMDPTSSYKLSLRPSMRKFDSENRNVDVLSWTKFRPCFLNRQIITL 534 SAFQIRYGGYKGVVA+DPTS +KLSLRPSM KF+S+N +DVL+W++F P FLNR+IITL Sbjct: 568 SAFQIRYGGYKGVVAIDPTSYHKLSLRPSMHKFNSKNTILDVLNWSRFLPAFLNREIITL 627 Query: 535 LSTLGVRDQSFENLQEEDINRLDLILDRKDMALEVLQIMSGGENHDVIINMLRCGYSPKD 714 LSTLG+ DQ+FE LQ++ + LD I+ DMAL+ LQIMS G++H +I ML GYSP Sbjct: 628 LSTLGIPDQNFECLQKKTMVHLDQIMINSDMALDTLQIMSSGDDHKTLIEMLSGGYSPNT 687 Query: 715 EPYLSMVLHAFRAAKLLELKHKARIFVLKGRCLMGCLDEYRILEYGEIFVQVTEPKSSLY 894 EPYLSM+L AFR +LLEL+ K RIF+ KGR L+GCLDE L YGE+F+QV++ + +Y Sbjct: 688 EPYLSMMLQAFREYQLLELRTKCRIFIPKGRVLIGCLDETGTLNYGEVFIQVSKANTKIY 747 Query: 895 ---FGTTGNQTSIRKRIITGTVIVAKNPCLHPGDVRILRAVDDPRLHH--LVDCVVFPQK 1059 +G + I+ G V+VAKNPCLHPGD+R+L AV+ P L H +VDC+VFPQK Sbjct: 748 DDGLSASGFIDRDKTYILQGKVVVAKNPCLHPGDIRVLHAVNVPGLDHEYMVDCLVFPQK 807 Query: 1060 GKRPHPNECSGSDLDGDLYFICWDKSLIPPEVDMPMDYTAPPPISLNRPVTIEDIQESFA 1239 G+RPHP ECSGSDLDGDLYF+ WD+ LIPPE D PMDY PI L+ VTI++IQE F Sbjct: 808 GERPHPYECSGSDLDGDLYFVSWDELLIPPEQDSPMDYVGRQPIKLDHDVTIKEIQEYFV 867 Query: 1240 NYMLNDSVGII 1272 NYMLNDS+G+I Sbjct: 868 NYMLNDSLGVI 878 >XP_002284914.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Vitis vinifera] Length = 1121 Score = 523 bits (1346), Expect = e-173 Identities = 263/429 (61%), Positives = 323/429 (75%), Gaps = 5/429 (1%) Frame = +1 Query: 1 GIVIGRKKFEFLAYSNSQLRESSLWMFASNEQVTAETIRAWMGNFLSIRNVAKCAARMGQ 180 GIVIG KKF+FLA+S+SQLR++S WMFAS +TA IR+WMG+F IRNVAK AAR+GQ Sbjct: 434 GIVIGDKKFDFLAFSSSQLRDNSAWMFASRPGLTAAEIRSWMGDFSQIRNVAKYAARLGQ 493 Query: 181 CFSSSKKTLCVYGSEVEDCMDITIERDSNRYVFSDGIGKISVALAEELAVHCGC-DYVPS 357 FSSSK+TL V E+E+ DI I + YVFSDGIGKIS LA +A+ CGC PS Sbjct: 494 SFSSSKETLKVAKDEIENIPDIEIHKGRTTYVFSDGIGKISPQLAHRVAIKCGCKSSTPS 553 Query: 358 AFQIRYGGYKGVVAMDPTSSYKLSLRPSMRKFDSENRNVDVLSWTKFRPCFLNRQIITLL 537 AFQIRYGGYKGVVA+DPTSS KLSLR SM K++S+N N+DVL+W+K++P FLNRQ+ITLL Sbjct: 554 AFQIRYGGYKGVVAVDPTSSRKLSLRKSMFKYESDNTNLDVLAWSKYQPSFLNRQLITLL 613 Query: 538 STLGVRDQSFENLQEEDINRLDLILDRKDMALEVLQIMSGGENHDVIINMLRCGYSPKDE 717 STLGV+D FE Q +++LD IL A E L++MS GEN +V+ ML CGY P E Sbjct: 614 STLGVKDHVFEKKQRAAVDQLDTILKDPVAAQEALELMSPGENTNVLKEMLMCGYKPDAE 673 Query: 718 PYLSMVLHAFRAAKLLELKHKARIFVLKGRCLMGCLDEYRILEYGEIFVQVTEPKSSLYF 897 P+LSM+L FRAAKLLEL+ K RIFV GR +MGCLDE R LEYGE+FVQ++ F Sbjct: 674 PFLSMMLQTFRAAKLLELRTKTRIFVPNGRSMMGCLDETRTLEYGEVFVQISGTGGRQSF 733 Query: 898 GTT----GNQTSIRKRIITGTVIVAKNPCLHPGDVRILRAVDDPRLHHLVDCVVFPQKGK 1065 G + G+ + I+ G ++VAKNPCLHPGDVR+L AV+ P LHH+VDCVVFPQKGK Sbjct: 734 GDSLMFRGSGSHHDNFILEGKIVVAKNPCLHPGDVRVLWAVNVPTLHHMVDCVVFPQKGK 793 Query: 1066 RPHPNECSGSDLDGDLYFICWDKSLIPPEVDMPMDYTAPPPISLNRPVTIEDIQESFANY 1245 RPHPNECSGSDLDGD+YF+CWD+ LIPP+ PMDYT P L+ V IE+++E F NY Sbjct: 794 RPHPNECSGSDLDGDIYFVCWDRDLIPPQQINPMDYTPAPTKVLDHDVMIEEVEEYFTNY 853 Query: 1246 MLNDSVGII 1272 ++NDS+GII Sbjct: 854 IVNDSLGII 862 >XP_002281315.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Vitis vinifera] XP_010650995.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Vitis vinifera] Length = 1109 Score = 520 bits (1340), Expect = e-172 Identities = 267/429 (62%), Positives = 318/429 (74%), Gaps = 5/429 (1%) Frame = +1 Query: 1 GIVIGRKKFEFLAYSNSQLRESSLWMFASNEQVTAETIRAWMGNFLSIRNVAKCAARMGQ 180 GIVIG KKF+FLA S+SQLR++S WMFAS +TA IR+ MG+F IRNVAK AAR+GQ Sbjct: 432 GIVIGDKKFDFLAVSSSQLRDNSAWMFASRPGLTAADIRSRMGDFSQIRNVAKYAARLGQ 491 Query: 181 CFSSSKKTLCVYGSEVEDCMDITIERDSNRYVFSDGIGKISVALAEELAVHCGC-DYVPS 357 FSSSK+TL V E+E DI RD YVFSDGIGKIS LA +A+ CGC + PS Sbjct: 492 SFSSSKETLKVAKHEIEIIPDIETHRDGTTYVFSDGIGKISAELAHRVAIKCGCKNSTPS 551 Query: 358 AFQIRYGGYKGVVAMDPTSSYKLSLRPSMRKFDSENRNVDVLSWTKFRPCFLNRQIITLL 537 AFQIRYGGYKGVVA+DPTSS KLSLR SM K++SEN N+DVLSW+K+RPCFLNRQ+ITLL Sbjct: 552 AFQIRYGGYKGVVAVDPTSSRKLSLRKSMFKYESENTNLDVLSWSKYRPCFLNRQLITLL 611 Query: 538 STLGVRDQSFENLQEEDINRLDLILDRKDMALEVLQIMSGGENHDVIINMLRCGYSPKDE 717 STLGV+D FE Q E +++LD IL A E L++MS GEN +++ ML CGY P E Sbjct: 612 STLGVKDHVFEKKQREAVDQLDTILKDPLRAQEALELMSPGENTNILKEMLMCGYKPDAE 671 Query: 718 PYLSMVLHAFRAAKLLELKHKARIFVLKGRCLMGCLDEYRILEYGEIFVQVTEPKSSLYF 897 P+LSM+L FRAAKLLEL+ K RIFV GR +MGCLDE R LEYGE+FVQ++ F Sbjct: 672 PFLSMMLQTFRAAKLLELRTKTRIFVPNGRSMMGCLDETRTLEYGEVFVQISGTGGRQSF 731 Query: 898 GTT----GNQTSIRKRIITGTVIVAKNPCLHPGDVRILRAVDDPRLHHLVDCVVFPQKGK 1065 G + G+ + I+ G V+VAKNPCLHPGDVRIL AVD P LHH+VDCVVFPQKG Sbjct: 732 GDSLMFYGSGSHHDNFILEGKVVVAKNPCLHPGDVRILSAVDVPALHHMVDCVVFPQKGM 791 Query: 1066 RPHPNECSGSDLDGDLYFICWDKSLIPPEVDMPMDYTAPPPISLNRPVTIEDIQESFANY 1245 RPHP+ECSGSDLDGD+YF+CWD LIPP PMDYT P L+ V IE+++E F NY Sbjct: 792 RPHPDECSGSDLDGDIYFVCWDHDLIPPRQINPMDYTPAPTKVLDHDVMIEEVEEYFTNY 851 Query: 1246 MLNDSVGII 1272 + ND +GII Sbjct: 852 IGNDKLGII 860 >XP_010275353.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Nelumbo nucifera] XP_010275424.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Nelumbo nucifera] XP_010275500.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Nelumbo nucifera] XP_010275583.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Nelumbo nucifera] XP_010275643.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Nelumbo nucifera] XP_010275710.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Nelumbo nucifera] Length = 1136 Score = 520 bits (1340), Expect = e-172 Identities = 263/430 (61%), Positives = 326/430 (75%), Gaps = 6/430 (1%) Frame = +1 Query: 1 GIVIGRKKFEFLAYSNSQLRESSLWMFASNEQVTAETIRAWMGNFLSIRNVAKCAARMGQ 180 GIVIG KKF+FLA+S+SQLR++S WMFAS+ TA +IR WMG+F IRNVAK AAR+GQ Sbjct: 446 GIVIGDKKFDFLAFSSSQLRDNSAWMFASSNGYTAASIRQWMGDFSKIRNVAKYAARLGQ 505 Query: 181 CFSSSKKTLCVYGSEVEDCMDITIERDSNRYVFSDGIGKISVALAEELAVHCGCD-YVPS 357 FSSS++TL VY E E DI +E Y+FSDGIGKIS A+++A CG PS Sbjct: 506 SFSSSRETLNVYEHETEIIDDIKVEWRGIEYIFSDGIGKISADFAKQVAKKCGFKGSFPS 565 Query: 358 AFQIRYGGYKGVVAMDPTSSYKLSLRPSMRKFDSENRNVDVLSWTKFRPCFLNRQIITLL 537 AFQIRYGGYKGVVA+DPTS+ KLSLR SM K++S N +DVLSW+K++PCFLNRQIITLL Sbjct: 566 AFQIRYGGYKGVVAVDPTSTKKLSLRRSMSKYESRNTKLDVLSWSKYQPCFLNRQIITLL 625 Query: 538 STLGVRDQSFENLQEEDINRLDLILDRKDMALEVLQIMSGGENHDVIINMLRCGYSPKDE 717 STLGVRD FE Q+E +++LD IL A E L+IMS GEN +++ ML CGY P E Sbjct: 626 STLGVRDSIFEKKQKEAMDQLDAILTDSLKAQEALEIMSPGENTNILKEMLLCGYEPNAE 685 Query: 718 PYLSMVLHAFRAAKLLELKHKARIFVLKGRCLMGCLDEYRILEYGEIFVQVT-----EPK 882 P+LSM+L FRA+KLLEL+ K RIFV GR L+GCLDE R L+YGE+FVQV+ + Sbjct: 686 PFLSMMLQTFRASKLLELRTKTRIFVPNGRSLLGCLDETRTLKYGEVFVQVSSIGRRQFH 745 Query: 883 SSLYFGTTGNQTSIRKRIITGTVIVAKNPCLHPGDVRILRAVDDPRLHHLVDCVVFPQKG 1062 S F +GN+ +K I+ G +IVAKNPCLHPGDVR+L+AV+ P LHH+VDCVVFPQ+G Sbjct: 746 ESSLFVFSGNEPEQQKFIVEGKIIVAKNPCLHPGDVRLLQAVNVPALHHMVDCVVFPQEG 805 Query: 1063 KRPHPNECSGSDLDGDLYFICWDKSLIPPEVDMPMDYTAPPPISLNRPVTIEDIQESFAN 1242 KRPHPNECSGSDLDGD+YF+CWD LIPP PM+Y P ++L+ VTIE+I+E F N Sbjct: 806 KRPHPNECSGSDLDGDVYFVCWDPDLIPPRQIQPMEYLPEPSVNLDHDVTIEEIEEYFTN 865 Query: 1243 YMLNDSVGII 1272 Y++N+S+GII Sbjct: 866 YIVNESLGII 875 >XP_006469265.1 PREDICTED: RNA-dependent RNA polymerase 1 isoform X2 [Citrus sinensis] XP_015382842.1 PREDICTED: RNA-dependent RNA polymerase 1 isoform X2 [Citrus sinensis] Length = 1132 Score = 519 bits (1336), Expect = e-171 Identities = 259/428 (60%), Positives = 320/428 (74%), Gaps = 4/428 (0%) Frame = +1 Query: 1 GIVIGRKKFEFLAYSNSQLRESSLWMFASNEQVTAETIRAWMGNFLSIRNVAKCAARMGQ 180 GI+IG +KFEFLA+S+SQLRESS WMFAS +TA IR WMGNF IRNVAK AAR+GQ Sbjct: 449 GILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQ 508 Query: 181 CFSSSKKTLCVYGSEVEDCMDITIERDSNRYVFSDGIGKISVALAEELAVHCGC-DYVPS 357 FSSSK+TL V+ E+E D+ IE +YVFSDGIGK+S A ++A CG D PS Sbjct: 509 SFSSSKETLSVHMDEIEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPS 568 Query: 358 AFQIRYGGYKGVVAMDPTSSYKLSLRPSMRKFDSENRNVDVLSWTKFRPCFLNRQIITLL 537 AFQIRYGGYKGVVA DPTSS KLSLR SMRK++SE +DVL+W+K++PCFLNRQ+I+LL Sbjct: 569 AFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLL 628 Query: 538 STLGVRDQSFENLQEEDINRLDLILDRKDMALEVLQIMSGGENHDVIINMLRCGYSPKDE 717 STLG+ D+ FE Q E + +LD IL A E L++MS GEN +++ +L CGY P E Sbjct: 629 STLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAE 688 Query: 718 PYLSMVLHAFRAAKLLELKHKARIFVLKGRCLMGCLDEYRILEYGEIFVQVTEPKSSLYF 897 P+LSM+L FRA+KLLEL+ K RIF+ GR +MGCLDE R L YG++FVQ++ Sbjct: 689 PFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLH 748 Query: 898 GTTGNQTSIRKR---IITGTVIVAKNPCLHPGDVRILRAVDDPRLHHLVDCVVFPQKGKR 1068 G + +S R R I+ G V+VAKNPCLHPGDVR+L+AV+ P LHH+VDCVVFPQKG R Sbjct: 749 GESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMR 808 Query: 1069 PHPNECSGSDLDGDLYFICWDKSLIPPEVDMPMDYTAPPPISLNRPVTIEDIQESFANYM 1248 PHPNECSGSDLDGD+YF+CWD LIPP+ D PMDYT + L+ V IED++E F NY+ Sbjct: 809 PHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDVEEYFTNYI 868 Query: 1249 LNDSVGII 1272 +NDS+GII Sbjct: 869 VNDSLGII 876 >XP_015382841.1 PREDICTED: RNA-dependent RNA polymerase 1 isoform X1 [Citrus sinensis] Length = 1138 Score = 519 bits (1336), Expect = e-171 Identities = 259/428 (60%), Positives = 320/428 (74%), Gaps = 4/428 (0%) Frame = +1 Query: 1 GIVIGRKKFEFLAYSNSQLRESSLWMFASNEQVTAETIRAWMGNFLSIRNVAKCAARMGQ 180 GI+IG +KFEFLA+S+SQLRESS WMFAS +TA IR WMGNF IRNVAK AAR+GQ Sbjct: 455 GILIGDRKFEFLAFSSSQLRESSAWMFASRYGLTAAEIREWMGNFREIRNVAKYAARLGQ 514 Query: 181 CFSSSKKTLCVYGSEVEDCMDITIERDSNRYVFSDGIGKISVALAEELAVHCGC-DYVPS 357 FSSSK+TL V+ E+E D+ IE +YVFSDGIGK+S A ++A CG D PS Sbjct: 515 SFSSSKETLSVHMDEIEIIPDVKIEIGKTKYVFSDGIGKVSAEFARKVASKCGLKDNPPS 574 Query: 358 AFQIRYGGYKGVVAMDPTSSYKLSLRPSMRKFDSENRNVDVLSWTKFRPCFLNRQIITLL 537 AFQIRYGGYKGVVA DPTSS KLSLR SMRK++SE +DVL+W+K++PCFLNRQ+I+LL Sbjct: 575 AFQIRYGGYKGVVAADPTSSKKLSLRDSMRKYESELTKLDVLAWSKYQPCFLNRQLISLL 634 Query: 538 STLGVRDQSFENLQEEDINRLDLILDRKDMALEVLQIMSGGENHDVIINMLRCGYSPKDE 717 STLG+ D+ FE Q E + +LD IL A E L++MS GEN +++ +L CGY P E Sbjct: 635 STLGIWDEIFEKKQREAVRQLDAILTDPLKAQEALELMSPGENTNILKELLICGYKPDAE 694 Query: 718 PYLSMVLHAFRAAKLLELKHKARIFVLKGRCLMGCLDEYRILEYGEIFVQVTEPKSSLYF 897 P+LSM+L FRA+KLLEL+ K RIF+ GR +MGCLDE R L YG++FVQ++ Sbjct: 695 PFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGCLDETRTLNYGQVFVQISGAGYRQLH 754 Query: 898 GTTGNQTSIRKR---IITGTVIVAKNPCLHPGDVRILRAVDDPRLHHLVDCVVFPQKGKR 1068 G + +S R R I+ G V+VAKNPCLHPGDVR+L+AV+ P LHH+VDCVVFPQKG R Sbjct: 755 GESSLFSSSRSRQRFIVQGLVVVAKNPCLHPGDVRVLKAVNVPALHHMVDCVVFPQKGMR 814 Query: 1069 PHPNECSGSDLDGDLYFICWDKSLIPPEVDMPMDYTAPPPISLNRPVTIEDIQESFANYM 1248 PHPNECSGSDLDGD+YF+CWD LIPP+ D PMDYT + L+ V IED++E F NY+ Sbjct: 815 PHPNECSGSDLDGDIYFVCWDDELIPPQQDPPMDYTPAQSMQLDHDVQIEDVEEYFTNYI 874 Query: 1249 LNDSVGII 1272 +NDS+GII Sbjct: 875 VNDSLGII 882 >CAA09896.1 RNA-directed RNA polymerase, partial [Petunia x hybrida] Length = 775 Score = 508 bits (1307), Expect = e-171 Identities = 249/430 (57%), Positives = 315/430 (73%), Gaps = 6/430 (1%) Frame = +1 Query: 1 GIVIGRKKFEFLAYSNSQLRESSLWMFASNEQVTAETIRAWMGNFLSIRNVAKCAARMGQ 180 G+VIG KKFEFLA+S+SQLR++S+WMFAS +TA IR WMG+F IRNVAK AAR+GQ Sbjct: 127 GLVIGAKKFEFLAFSSSQLRDNSVWMFASRPGLTAYDIRTWMGDFQQIRNVAKYAARLGQ 186 Query: 181 CFSSSKKTLCVYGSEVEDCMDITIERDSNRYVFSDGIGKISVALAEELAVHCGCDYVPSA 360 F SS++TL V E++ D+ + YVFSDGIGKIS A +A CG + PSA Sbjct: 187 SFGSSRETLSVGRHEIKYIPDVEVH--GTNYVFSDGIGKISADFAHRVAKKCGLQHTPSA 244 Query: 361 FQIRYGGYKGVVAMDPTSSYKLSLRPSMRKFDSENRNVDVLSWTKFRPCFLNRQIITLLS 540 FQIRYGGYKGVVA+DP S KLSLR SM K++S N +DVL W+K++PC+LNRQ++TL+S Sbjct: 245 FQIRYGGYKGVVAVDPYSPMKLSLRKSMLKYESNNTKLDVLGWSKYQPCYLNRQLVTLMS 304 Query: 541 TLGVRDQSFENLQEEDINRLDLILDRKDMALEVLQIMSGGENHDVIINMLRCGYSPKDEP 720 TLGV+D+ F+ Q E + +LD IL A E L +MS GEN +++ ML CGY P EP Sbjct: 305 TLGVKDEVFKRKQNEAVAQLDAILHDSLKAQEALDLMSPGENTNILKEMLNCGYLPDAEP 364 Query: 721 YLSMVLHAFRAAKLLELKHKARIFVLKGRCLMGCLDEYRILEYGEIFVQVTEP------K 882 +LSM+L FRA+KLL+L+ + RIF+ KGR +MGCLDE R LEYG++FVQ T + Sbjct: 365 FLSMMLQTFRASKLLDLRTRTRIFIPKGRSMMGCLDESRTLEYGQVFVQFTGAGGRQFYE 424 Query: 883 SSLYFGTTGNQTSIRKRIITGTVIVAKNPCLHPGDVRILRAVDDPRLHHLVDCVVFPQKG 1062 S +F +G+ I+ G V+VAKNPCLHPGD+R+L+AVD P LHH+VDCVVFPQKG Sbjct: 425 ESHHFNDSGSAN--YNFILKGNVVVAKNPCLHPGDIRVLKAVDVPALHHMVDCVVFPQKG 482 Query: 1063 KRPHPNECSGSDLDGDLYFICWDKSLIPPEVDMPMDYTAPPPISLNRPVTIEDIQESFAN 1242 KRPHPNECSGSDLDGD+YF+CWD LIPP PMDYT P I L+ VTIE+++E F N Sbjct: 483 KRPHPNECSGSDLDGDIYFVCWDPDLIPPRQVQPMDYTPAPSIQLDHDVTIEEVEEYFTN 542 Query: 1243 YMLNDSVGII 1272 YM+ND +G+I Sbjct: 543 YMVNDGLGVI 552 >AJP06346.1 RDR2 [Pinus tabuliformis] Length = 1123 Score = 518 bits (1333), Expect = e-171 Identities = 266/440 (60%), Positives = 330/440 (75%), Gaps = 16/440 (3%) Frame = +1 Query: 1 GIVIGRKKFEFLAYSNSQLRESSLWMFASNEQVTAETIRAWMGNFLSIRNVAKCAARMGQ 180 GIV+G+KKFEFLA+S SQLRE+SLWMF+ N++VTA++IR WMG+F +IRNVAKCAARMGQ Sbjct: 448 GIVVGKKKFEFLAFSASQLRENSLWMFSPNDKVTADSIRKWMGDFDNIRNVAKCAARMGQ 507 Query: 181 CFSSSKKTLCVYGSEVEDCMDITIERDSNRYVFSDGIGKISVALAEELAVHCGCDYV--P 354 FSSS++T V EV DI + D +Y FSDGIGKIS+ LA+++A CG + P Sbjct: 508 SFSSSRQTSNVQEHEVLIIPDIEVSTDGIKYCFSDGIGKISLPLAKQIAYKCGLSTIAPP 567 Query: 355 SAFQIRYGGYKGVVAMDPTSSYKLSLRPSMRKFDSENRNVDVLSWTKFRPCFLNRQIITL 534 SAFQIRYGGYKGVVA+DPTS +KLSLRPSM KF+S+N +DVL+W++F P FLNR+IITL Sbjct: 568 SAFQIRYGGYKGVVAIDPTSYHKLSLRPSMHKFNSKNTILDVLNWSRFLPAFLNREIITL 627 Query: 535 LSTLGVRDQSFENLQEEDINRLDLILDRKDMALEVLQIMSGGENHDVIINMLRCGYSPKD 714 LSTLGV DQ+FE LQ++ + LD I+ DMAL+ LQIMS G++H +I ML GYSP Sbjct: 628 LSTLGVPDQNFECLQKKTMVHLDQIMISSDMALDTLQIMSSGDDHKTLIEMLSGGYSPNT 687 Query: 715 EPYLSMVLHAFRAAKLLELKHKARIFVLKGRCLMGCLDEYRILEYGEIFVQVTEPKSSLY 894 EPYLSM+L AFR +LLEL+ K RIFV KGR L+GCLDE L YGE+F+QV++ + +Y Sbjct: 688 EPYLSMMLQAFREYQLLELRTKCRIFVPKGRVLIGCLDETGTLNYGEVFIQVSKANTKIY 747 Query: 895 ---FGTTGNQTSIRKRIITGTVIVAKNPCLHPGDVRILRAVDDPRLHH--LVDCVVFPQK 1059 +G + I+ G V+VAKNPCLHPGD+R+L AV+ P L H +VDC+VFPQK Sbjct: 748 DDGLSASGFIDRDKTYILQGKVVVAKNPCLHPGDIRVLHAVNVPGLDHEYMVDCLVFPQK 807 Query: 1060 GKRPHPNECSGSDLDGDLYFICWDKSLIPPEVDMPMDYTAPPPISLNRPVTIED------ 1221 G+RPHP ECSGSDLDGDLYF+ WD+ LIPPE D PMDY PI L+ VTI+D Sbjct: 808 GERPHPYECSGSDLDGDLYFVSWDELLIPPEQDSPMDYVGRQPIKLDHDVTIKDLSNAFL 867 Query: 1222 ---IQESFANYMLNDSVGII 1272 IQE F NYMLNDS+G+I Sbjct: 868 IQEIQEYFVNYMLNDSLGVI 887 >CDP05596.1 unnamed protein product [Coffea canephora] Length = 1112 Score = 517 bits (1331), Expect = e-171 Identities = 254/427 (59%), Positives = 322/427 (75%), Gaps = 3/427 (0%) Frame = +1 Query: 1 GIVIGRKKFEFLAYSNSQLRESSLWMFASNEQVTAETIRAWMGNFLSIRNVAKCAARMGQ 180 G+VIG KKFEFLA+S+SQLR++S+WMFAS +TA IR WMG+F IRNVAK AAR+GQ Sbjct: 433 GMVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTAADIRTWMGDFSRIRNVAKYAARLGQ 492 Query: 181 CFSSSKKTLCVYGSEVEDCMDITIERD---SNRYVFSDGIGKISVALAEELAVHCGCDYV 351 FSSS +TL V E+E DI + +++YVFSDGIGK+S A ++A CG + Sbjct: 493 SFSSSTETLNVGRHEIEMISDIEVRGGYFGTSKYVFSDGIGKMSAQFARQVATKCGLSFT 552 Query: 352 PSAFQIRYGGYKGVVAMDPTSSYKLSLRPSMRKFDSENRNVDVLSWTKFRPCFLNRQIIT 531 PSAFQIRYGG+KGVVA+DPTSS KLSLR SM K++S+N +DVL+W+K++PCFLNRQ+IT Sbjct: 553 PSAFQIRYGGFKGVVAVDPTSSKKLSLRQSMMKYESDNTKLDVLAWSKYQPCFLNRQLIT 612 Query: 532 LLSTLGVRDQSFENLQEEDINRLDLILDRKDMALEVLQIMSGGENHDVIINMLRCGYSPK 711 LLSTLGV+D FE Q E + +LD IL A E L++M+ GEN +V+ ML+CGY P Sbjct: 613 LLSTLGVKDVVFEKKQREAVAQLDTILTDPLRAREALELMAPGENTNVLKEMLKCGYKPD 672 Query: 712 DEPYLSMVLHAFRAAKLLELKHKARIFVLKGRCLMGCLDEYRILEYGEIFVQVTEPKSSL 891 EP+LSM+L FRA+KLL+L+ K RIF+ GR ++GCLDE R LEYG++FVQ + Sbjct: 673 SEPFLSMMLQTFRASKLLDLRTKTRIFIPDGRSMIGCLDETRTLEYGQVFVQFSSAGCRQ 732 Query: 892 YFGTTGNQTSIRKRIITGTVIVAKNPCLHPGDVRILRAVDDPRLHHLVDCVVFPQKGKRP 1071 ++ + + K I+ GTV+VAKNPCLHPGD+RIL+AVD P LHH+VDCVVFPQKGKRP Sbjct: 733 FYDDSISYYE-HKTILKGTVVVAKNPCLHPGDIRILKAVDLPTLHHMVDCVVFPQKGKRP 791 Query: 1072 HPNECSGSDLDGDLYFICWDKSLIPPEVDMPMDYTAPPPISLNRPVTIEDIQESFANYML 1251 H NECSGSDLDGD+YF+CWD LIPP D PMDYT P + L VTIE+++E F NY++ Sbjct: 792 HTNECSGSDLDGDIYFVCWDPDLIPPRQDEPMDYTPAPTMQLEHEVTIEEVEEYFTNYIV 851 Query: 1252 NDSVGII 1272 NDS+GII Sbjct: 852 NDSLGII 858 >XP_004498236.1 PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X1 [Cicer arietinum] Length = 1126 Score = 516 bits (1330), Expect = e-170 Identities = 262/426 (61%), Positives = 320/426 (75%), Gaps = 2/426 (0%) Frame = +1 Query: 1 GIVIGRKKFEFLAYSNSQLRESSLWMFASNEQ-VTAETIRAWMGNFLSIRNVAKCAARMG 177 GIVIG KKFEFLA+S+SQLRE+SLWMFA +TA+ IRAWMG+F IRNVAK AAR+G Sbjct: 449 GIVIGDKKFEFLAFSSSQLRENSLWMFAPTATGLTAQFIRAWMGDFSQIRNVAKYAARLG 508 Query: 178 QCFSSSKKTLCVYGSEVEDCMDITIERDSNRYVFSDGIGKISVALAEELAVHCGCDYVPS 357 Q F SS +TL V +E+E D ++ D+ YVFSDGIGKIS+ A +A CG D PS Sbjct: 509 QSFGSSTETLSVNRNEIEIIPDAQVKHDTIEYVFSDGIGKISLEFARRVAKKCGYDSTPS 568 Query: 358 AFQIRYGGYKGVVAMDPTSSYKLSLRPSMRKFDSENRNVDVLSWTKFRPCFLNRQIITLL 537 AFQIRYGGYKGVVA+DPTSS KLSLR SM K+DS+N +DVL+ +K++PC+LNRQ+ITLL Sbjct: 569 AFQIRYGGYKGVVAVDPTSSVKLSLRKSMYKYDSDNTKLDVLACSKYQPCYLNRQLITLL 628 Query: 538 STLGVRDQSFENLQEEDINRLDLILDRKDMALEVLQIMSGGENHDVIINMLRCGYSPKDE 717 STL V D FE Q+E +N+L+ IL A EVL +MS GE +++ ML CGY P E Sbjct: 629 STLKVEDSVFEKKQKEAVNQLNTILTNSLKAQEVLDLMSTGEITNILKEMLFCGYKPNVE 688 Query: 718 PYLSMVLHAFRAAKLLELKHKARIFVLKGRCLMGCLDEYRILEYGEIFVQVTEPK-SSLY 894 P+LSM+L FRA+KLLEL+ K RIF+ KGR +MG LDE R LEYGE+FVQ + + SSL Sbjct: 689 PFLSMMLQTFRASKLLELRQKTRIFIPKGRAMMGVLDETRTLEYGEVFVQYSNNRISSLS 748 Query: 895 FGTTGNQTSIRKRIITGTVIVAKNPCLHPGDVRILRAVDDPRLHHLVDCVVFPQKGKRPH 1074 +G S ++TG V+VAKNPCLHPGDVR+L+AVD P LHH+VDCVVFPQKG RPH Sbjct: 749 YG------SANSLVVTGKVVVAKNPCLHPGDVRVLKAVDVPALHHMVDCVVFPQKGHRPH 802 Query: 1075 PNECSGSDLDGDLYFICWDKSLIPPEVDMPMDYTAPPPISLNRPVTIEDIQESFANYMLN 1254 PNECSGSDLDGD+YF+CWD LIPPE PM+Y + PI L V IE+++E F NY+LN Sbjct: 803 PNECSGSDLDGDIYFVCWDPELIPPETTEPMEYASVQPIVLYHDVEIEEVEEYFTNYILN 862 Query: 1255 DSVGII 1272 DS+GII Sbjct: 863 DSLGII 868 >ABI34311.1 RNA dependent RNA polymerase family protein [Solanum demissum] Length = 963 Score = 511 bits (1315), Expect = e-170 Identities = 253/429 (58%), Positives = 316/429 (73%), Gaps = 5/429 (1%) Frame = +1 Query: 1 GIVIGRKKFEFLAYSNSQLRESSLWMFASNEQVTAETIRAWMGNFLSIRNVAKCAARMGQ 180 G VIG KK EFLA+S+SQLR++S+WMFAS +TA IR WMG+F I+NVAK AAR+GQ Sbjct: 282 GFVIGDKKIEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWMGDFSQIKNVAKYAARLGQ 341 Query: 181 CFSSSKKTLCVYGSEVEDCMDITIERDSNRYVFSDGIGKISVALAEELAVHCGCDYVPSA 360 F SSK+TL V E+E D+ + S YVFSDGIGKIS A +A CG Y PSA Sbjct: 342 SFGSSKETLSVLRHEIEVIPDVKVHGTS--YVFSDGIGKISADFARRVASKCGLQYTPSA 399 Query: 361 FQIRYGGYKGVVAMDPTSSYKLSLRPSMRKFDSENRNVDVLSWTKFRPCFLNRQIITLLS 540 FQIRYGGYKGVVA+DP SS KLSLR SM K++S+N +DVL W+K++PC+LNRQ+ITLLS Sbjct: 400 FQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLEWSKYQPCYLNRQLITLLS 459 Query: 541 TLGVRDQSFENLQEEDINRLDLILDRKDMALEVLQIMSGGENHDVIINMLRCGYSPKDEP 720 TLGV+D E Q+E +++LD IL A E L++MS GEN +++ ML CGY P EP Sbjct: 460 TLGVKDDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEP 519 Query: 721 YLSMVLHAFRAAKLLELKHKARIFVLKGRCLMGCLDEYRILEYGEIFVQVT-----EPKS 885 +LSM+L FRA+KLL+L+ K+RIF+ GR +MGCLDE R LEYG++FVQ T E Sbjct: 520 FLSMMLQTFRASKLLDLRTKSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSE 579 Query: 886 SLYFGTTGNQTSIRKRIITGTVIVAKNPCLHPGDVRILRAVDDPRLHHLVDCVVFPQKGK 1065 L+ T+ I+ G V+VAKNPCLHPGD+R+LRAVD P LHH+VDCVVFPQKGK Sbjct: 580 DLHPFNNSRSTNC-NFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGK 638 Query: 1066 RPHPNECSGSDLDGDLYFICWDKSLIPPEVDMPMDYTAPPPISLNRPVTIEDIQESFANY 1245 RPHPNECSGSDLDGD+YF+CWD+ +IPP PM+Y P I L+ VTIE+++E F NY Sbjct: 639 RPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFTNY 698 Query: 1246 MLNDSVGII 1272 ++NDS+GII Sbjct: 699 IVNDSLGII 707 >XP_019704930.1 PREDICTED: probable RNA-dependent RNA polymerase 1 isoform X3 [Elaeis guineensis] Length = 980 Score = 511 bits (1316), Expect = e-170 Identities = 257/430 (59%), Positives = 323/430 (75%), Gaps = 6/430 (1%) Frame = +1 Query: 1 GIVIGRKKFEFLAYSNSQLRESSLWMFASNEQVTAETIRAWMGNFLSIRNVAKCAARMGQ 180 GI IG K F+FLA+S+SQLRE+S WMFASN ++TA IR WMG+F IRNVAK AAR+GQ Sbjct: 297 GITIGGKNFKFLAFSSSQLRENSSWMFASNGRLTAAAIRKWMGDFHEIRNVAKYAARLGQ 356 Query: 181 CFSSSKKTLCVYGSEVEDCMDITIERDSNRYVFSDGIGKISVALAEELAVHCGC-DYVPS 357 FSSS +TL V +V+D D+ RD +YVFSDGIGKIS + +A+ CG PS Sbjct: 357 SFSSSTETLTVDKHDVDDIPDV---RDG-KYVFSDGIGKISAEFSRRVAIKCGLKSSTPS 412 Query: 358 AFQIRYGGYKGVVAMDPTSSYKLSLRPSMRKFDSENRNVDVLSWTKFRPCFLNRQIITLL 537 AFQIRYGGYKGVVA+DPTSS KLSLR SMRK+ S+N +DVL+++K++PCFLNRQ+ITLL Sbjct: 413 AFQIRYGGYKGVVAVDPTSSKKLSLRESMRKYKSDNTKLDVLAYSKYQPCFLNRQLITLL 472 Query: 538 STLGVRDQSFENLQEEDINRLDLILDRKDMALEVLQIMSGGENHDVIINMLRCGYSPKDE 717 STLGV D FE QEE +N LD +L D A E +++MS GE V+ +L CGY P E Sbjct: 473 STLGVGDWIFEMKQEEAVNELDKMLTDPDRAWEAIELMSPGETTSVLKELLLCGYKPDSE 532 Query: 718 PYLSMVLHAFRAAKLLELKHKARIFVLKGRCLMGCLDEYRILEYGEIFVQVT-----EPK 882 P++SM+L FRAA+LLELK+K+RIF+ KGR +MGCLDE R LEYG++FVQV+ + Sbjct: 533 PFISMLLQTFRAARLLELKNKSRIFIQKGRAMMGCLDETRTLEYGQVFVQVSCTGRMQFH 592 Query: 883 SSLYFGTTGNQTSIRKRIITGTVIVAKNPCLHPGDVRILRAVDDPRLHHLVDCVVFPQKG 1062 ++ F G+++ ++ G V++AKNPCLHPGD+R+L AVD P LHH+VDCVVFPQKG Sbjct: 593 NNGLFMYGGSESDHHTAVLKGKVVIAKNPCLHPGDIRVLSAVDVPELHHMVDCVVFPQKG 652 Query: 1063 KRPHPNECSGSDLDGDLYFICWDKSLIPPEVDMPMDYTAPPPISLNRPVTIEDIQESFAN 1242 KRPHPNECSGSDLDGD+YF+ WD LIPP V PMDYT+ P L+ VTIE++ E F N Sbjct: 653 KRPHPNECSGSDLDGDIYFVSWDADLIPPRVVTPMDYTSAPSEILDHDVTIEEVMEYFTN 712 Query: 1243 YMLNDSVGII 1272 Y++NDS+GII Sbjct: 713 YIVNDSLGII 722 >ABO92978.1 putative RNA-dependent RNA-polymerase [Solanum tuberosum] Length = 935 Score = 509 bits (1312), Expect = e-170 Identities = 250/429 (58%), Positives = 318/429 (74%), Gaps = 5/429 (1%) Frame = +1 Query: 1 GIVIGRKKFEFLAYSNSQLRESSLWMFASNEQVTAETIRAWMGNFLSIRNVAKCAARMGQ 180 G VIG KKFEFLA+S+SQLR++S+WMFAS +TA IR+WMG+F I+NVAK AAR GQ Sbjct: 434 GFVIGDKKFEFLAFSSSQLRDNSVWMFASRRGLTANDIRSWMGDFSQIKNVAKYAARFGQ 493 Query: 181 CFSSSKKTLCVYGSEVEDCMDITIERDSNRYVFSDGIGKISVALAEELAVHCGCDYVPSA 360 F SS++TL V E+E D+ + S YVFSDGIGKIS A ++A +CG Y PSA Sbjct: 494 SFGSSRETLSVLRHEIEVIPDVKVHGTS--YVFSDGIGKISADFARKVASNCGLQYTPSA 551 Query: 361 FQIRYGGYKGVVAMDPTSSYKLSLRPSMRKFDSENRNVDVLSWTKFRPCFLNRQIITLLS 540 FQIRYGGYKGVVA+DP SS KLSLR SM K++S+N +DVL W+K++PC+LNRQ++TLLS Sbjct: 552 FQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLEWSKYQPCYLNRQLVTLLS 611 Query: 541 TLGVRDQSFENLQEEDINRLDLILDRKDMALEVLQIMSGGENHDVIINMLRCGYSPKDEP 720 TLGV+D E Q+E +++LD IL A E L++MS GEN +++ ML CGY P EP Sbjct: 612 TLGVKDDVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEP 671 Query: 721 YLSMVLHAFRAAKLLELKHKARIFVLKGRCLMGCLDEYRILEYGEIFVQVT-----EPKS 885 +LSM+L FRA+KLL+L+ K+RIF+ GR +MGCLDE R LEYG++FVQ T E Sbjct: 672 FLSMMLQTFRASKLLDLRTKSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSE 731 Query: 886 SLYFGTTGNQTSIRKRIITGTVIVAKNPCLHPGDVRILRAVDDPRLHHLVDCVVFPQKGK 1065 L+ T+ I+ G V+VAKNPCLHPGD+R+LRAVD P LHH+VDCVVFPQKGK Sbjct: 732 DLHPFNNSRSTNC-NFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGK 790 Query: 1066 RPHPNECSGSDLDGDLYFICWDKSLIPPEVDMPMDYTAPPPISLNRPVTIEDIQESFANY 1245 RPHPNECSGSDLDGD+YF+CWD+ +IPP M++ PP I L+ VTIE+++E F NY Sbjct: 791 RPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQAMEFPPPPSIQLDHDVTIEEVEEYFTNY 850 Query: 1246 MLNDSVGII 1272 ++ND +GII Sbjct: 851 IVNDGLGII 859 >XP_003518619.1 PREDICTED: RNA-dependent RNA polymerase 1 [Glycine max] XP_006574822.1 PREDICTED: RNA-dependent RNA polymerase 1 [Glycine max] XP_006574823.1 PREDICTED: RNA-dependent RNA polymerase 1 [Glycine max] KHN15461.1 RNA-dependent RNA polymerase 1 [Glycine soja] KRH70363.1 hypothetical protein GLYMA_02G086100 [Glycine max] Length = 1125 Score = 515 bits (1326), Expect = e-170 Identities = 258/426 (60%), Positives = 320/426 (75%), Gaps = 2/426 (0%) Frame = +1 Query: 1 GIVIGRKKFEFLAYSNSQLRESSLWMFASNEQ-VTAETIRAWMGNFLSIRNVAKCAARMG 177 GIV+G KKFEFLA+S+SQLRE+SLWMFA E TA IR WMGNF IRNVAK AAR+G Sbjct: 444 GIVVGDKKFEFLAFSSSQLRENSLWMFAPTETGCTAAYIRKWMGNFSQIRNVAKYAARLG 503 Query: 178 QCFSSSKKTLCVYGSEVEDCMDIT-IERDSNRYVFSDGIGKISVALAEELAVHCGCDYVP 354 Q F SS +TL V+ EVE D+ + D N YVFSDGIGKIS+ A+++A CG D P Sbjct: 504 QSFGSSTETLSVHRDEVEIIPDVKKLTYDGNEYVFSDGIGKISLEFAQKVAKKCGYDCTP 563 Query: 355 SAFQIRYGGYKGVVAMDPTSSYKLSLRPSMRKFDSENRNVDVLSWTKFRPCFLNRQIITL 534 SAFQIRYGGYKGVVA+DP S YKLSLR SMRK+DS+N +DVL+ +KF+PC+LNRQ+I+L Sbjct: 564 SAFQIRYGGYKGVVAVDPKSCYKLSLRKSMRKYDSDNTKLDVLARSKFQPCYLNRQLISL 623 Query: 535 LSTLGVRDQSFENLQEEDINRLDLILDRKDMALEVLQIMSGGENHDVIINMLRCGYSPKD 714 LSTLG++D FE Q E +N+L+ IL A EVL +MS GE +V+ ML CGY P + Sbjct: 624 LSTLGIKDDVFEKKQRETVNQLNTILTDSLKAQEVLDLMSAGEITNVLKEMLICGYKPNE 683 Query: 715 EPYLSMVLHAFRAAKLLELKHKARIFVLKGRCLMGCLDEYRILEYGEIFVQVTEPKSSLY 894 EP+LSM+L FRA+KLLEL+ K+RIF+ KGR +MGCLDE R LEYG++FVQ + + Sbjct: 684 EPFLSMMLQTFRASKLLELRLKSRIFIPKGRAMMGCLDETRTLEYGQVFVQFSNNRLQNL 743 Query: 895 FGTTGNQTSIRKRIITGTVIVAKNPCLHPGDVRILRAVDDPRLHHLVDCVVFPQKGKRPH 1074 + + ++ G V+VAKNPCLHPGDVR+L+AVD P L+H+VDCVVFPQKG RPH Sbjct: 744 SDDFFSYDLPKNYMVKGKVVVAKNPCLHPGDVRVLQAVDVPDLYHMVDCVVFPQKGPRPH 803 Query: 1075 PNECSGSDLDGDLYFICWDKSLIPPEVDMPMDYTAPPPISLNRPVTIEDIQESFANYMLN 1254 PNECSGSDLDGD+YF+CWD LIP PMDYTAP + L+ V IE+++E FANY++N Sbjct: 804 PNECSGSDLDGDIYFVCWDHELIPSRPIDPMDYTAPATVELDHDVMIEEVEEYFANYIVN 863 Query: 1255 DSVGII 1272 DS+GII Sbjct: 864 DSLGII 869 >ABO93006.1 putative RNA-dependent RNA-polymerase [Solanum tuberosum] Length = 1065 Score = 513 bits (1321), Expect = e-170 Identities = 254/429 (59%), Positives = 317/429 (73%), Gaps = 5/429 (1%) Frame = +1 Query: 1 GIVIGRKKFEFLAYSNSQLRESSLWMFASNEQVTAETIRAWMGNFLSIRNVAKCAARMGQ 180 G VIG KKFEFLA+S+SQLR++S+WMFAS +TA IR WMG+F I+NVAK AAR+GQ Sbjct: 433 GFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRTWMGDFSQIKNVAKYAARLGQ 492 Query: 181 CFSSSKKTLCVYGSEVEDCMDITIERDSNRYVFSDGIGKISVALAEELAVHCGCDYVPSA 360 F SSK+TL V E+E D+ + S YVFSDGIGKIS A +A CG Y PSA Sbjct: 493 SFGSSKETLSVLRHEIEVIPDVKVHGTS--YVFSDGIGKISADFARRVASKCGLQYTPSA 550 Query: 361 FQIRYGGYKGVVAMDPTSSYKLSLRPSMRKFDSENRNVDVLSWTKFRPCFLNRQIITLLS 540 FQIRYGGYKGVVA+DP SS KLSLR SM K++S+N +DVL W+K++PC+LNRQ+ITLLS Sbjct: 551 FQIRYGGYKGVVAVDPYSSMKLSLRKSMSKYESDNNKLDVLGWSKYQPCYLNRQLITLLS 610 Query: 541 TLGVRDQSFENLQEEDINRLDLILDRKDMALEVLQIMSGGENHDVIINMLRCGYSPKDEP 720 TLGV+D E Q+E +++LD IL A E L++MS GEN +++ ML CGY P EP Sbjct: 611 TLGVKDDILEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYMPDAEP 670 Query: 721 YLSMVLHAFRAAKLLELKHKARIFVLKGRCLMGCLDEYRILEYGEIFVQVT-----EPKS 885 +LSM+L FRA+KLL+L+ K+RIF+ GR +MGCLDE R LEYG++FVQ T E Sbjct: 671 FLSMMLQTFRASKLLDLRTKSRIFIPNGRAMMGCLDESRTLEYGQVFVQFTGAGHREFSE 730 Query: 886 SLYFGTTGNQTSIRKRIITGTVIVAKNPCLHPGDVRILRAVDDPRLHHLVDCVVFPQKGK 1065 L+ T+ I+ G V+VAKNPCLHPGD+R+LRAVD P LHH+VDCVVFPQKGK Sbjct: 731 DLHPFNNSRSTNC-NFILKGNVVVAKNPCLHPGDIRVLRAVDVPALHHMVDCVVFPQKGK 789 Query: 1066 RPHPNECSGSDLDGDLYFICWDKSLIPPEVDMPMDYTAPPPISLNRPVTIEDIQESFANY 1245 RPHPNECSGSDLDGD+YF+CWD+ +IPP PM+Y P I L+ VTIE+++E F NY Sbjct: 790 RPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFTNY 849 Query: 1246 MLNDSVGII 1272 ++NDS+GII Sbjct: 850 IVNDSLGII 858