BLASTX nr result
ID: Ephedra29_contig00014390
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00014390
(499 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ABK22144.1 unknown [Picea sitchensis] 134 2e-36
NP_180585.1 U2 small nuclear ribonucleoprotein B [Arabidopsis th... 132 1e-35
XP_002881095.1 hypothetical protein ARALYDRAFT_320780 [Arabidops... 132 1e-35
AAM64950.1 putative small nuclear ribonucleoprotein U2B [Arabido... 132 1e-35
XP_006410137.1 hypothetical protein EUTSA_v10017204mg [Eutrema s... 131 3e-35
GAU11229.1 hypothetical protein TSUD_342190 [Trifolium subterran... 129 3e-35
XP_013450357.1 small nuclear ribonucleoprotein [Medicago truncat... 129 5e-35
ADE76200.1 unknown [Picea sitchensis] ADE77712.1 unknown [Picea ... 130 8e-35
XP_006296407.1 hypothetical protein CARUB_v10025584mg [Capsella ... 130 1e-34
XP_020108948.1 U2 small nuclear ribonucleoprotein B'' [Ananas co... 130 1e-34
XP_010921064.1 PREDICTED: U2 small nuclear ribonucleoprotein B''... 129 2e-34
XP_008782587.1 PREDICTED: U2 small nuclear ribonucleoprotein B''... 129 2e-34
XP_009391692.1 PREDICTED: U2 small nuclear ribonucleoprotein B''... 129 3e-34
XP_004494379.1 PREDICTED: U1 small nuclear ribonucleoprotein A i... 129 3e-34
XP_019159785.1 PREDICTED: U2 small nuclear ribonucleoprotein B''... 129 3e-34
XP_012569565.1 PREDICTED: U1 small nuclear ribonucleoprotein A i... 129 3e-34
XP_019167228.1 PREDICTED: U2 small nuclear ribonucleoprotein B''... 129 3e-34
OAP08519.1 U2B'' [Arabidopsis thaliana] 129 3e-34
OAY81346.1 U1 small nuclear ribonucleoprotein A [Ananas comosus] 127 4e-34
XP_010545172.1 PREDICTED: U2 small nuclear ribonucleoprotein B''... 127 4e-34
>ABK22144.1 unknown [Picea sitchensis]
Length = 235
Score = 134 bits (338), Expect = 2e-36
Identities = 62/72 (86%), Positives = 71/72 (98%)
Frame = +3
Query: 3 FIQNLPHETTTMMLQLLFEQYPGFKEVRMVDAKPGIAFIEYVDDMQSTVAMQALQGFKIT 182
FIQNLPHETTTMMLQ+LF+QYPGFKEVRM++AKPGIAF+EY D+MQ++VAMQALQGFKIT
Sbjct: 164 FIQNLPHETTTMMLQMLFQQYPGFKEVRMIEAKPGIAFVEYGDEMQASVAMQALQGFKIT 223
Query: 183 PQNPMLISYAKK 218
PQNPMLI+YAKK
Sbjct: 224 PQNPMLITYAKK 235
>NP_180585.1 U2 small nuclear ribonucleoprotein B [Arabidopsis thaliana]
O22922.1 RecName: Full=U2 small nuclear
ribonucleoprotein B''; Short=U2 snRNP B'' AAC16931.1
putative small nuclear ribonucleoprotein U2B
[Arabidopsis thaliana] AAO23633.1 At2g30260 [Arabidopsis
thaliana] BAE99600.1 putative small nuclear
ribonucleoprotein U2B [Arabidopsis thaliana] AEC08363.1
U2 small nuclear ribonucleoprotein B [Arabidopsis
thaliana]
Length = 232
Score = 132 bits (333), Expect = 1e-35
Identities = 60/72 (83%), Positives = 70/72 (97%)
Frame = +3
Query: 3 FIQNLPHETTTMMLQLLFEQYPGFKEVRMVDAKPGIAFIEYVDDMQSTVAMQALQGFKIT 182
FIQNLPHETT+MMLQLLFEQYPGFKE+RM+DAKPGIAF+EY DD+Q+++AMQ LQGFKIT
Sbjct: 161 FIQNLPHETTSMMLQLLFEQYPGFKEIRMIDAKPGIAFVEYEDDVQASIAMQPLQGFKIT 220
Query: 183 PQNPMLISYAKK 218
PQNPM+IS+AKK
Sbjct: 221 PQNPMVISFAKK 232
>XP_002881095.1 hypothetical protein ARALYDRAFT_320780 [Arabidopsis lyrata subsp.
lyrata] EFH57354.1 hypothetical protein
ARALYDRAFT_320780 [Arabidopsis lyrata subsp. lyrata]
Length = 232
Score = 132 bits (333), Expect = 1e-35
Identities = 60/72 (83%), Positives = 70/72 (97%)
Frame = +3
Query: 3 FIQNLPHETTTMMLQLLFEQYPGFKEVRMVDAKPGIAFIEYVDDMQSTVAMQALQGFKIT 182
FIQNLPHETT+MMLQLLFEQYPGFKE+RM+DAKPGIAF+EY DD+Q+++AMQ LQGFKIT
Sbjct: 161 FIQNLPHETTSMMLQLLFEQYPGFKEIRMIDAKPGIAFVEYEDDVQASIAMQPLQGFKIT 220
Query: 183 PQNPMLISYAKK 218
PQNPM+IS+AKK
Sbjct: 221 PQNPMVISFAKK 232
>AAM64950.1 putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
Length = 232
Score = 132 bits (333), Expect = 1e-35
Identities = 60/72 (83%), Positives = 70/72 (97%)
Frame = +3
Query: 3 FIQNLPHETTTMMLQLLFEQYPGFKEVRMVDAKPGIAFIEYVDDMQSTVAMQALQGFKIT 182
FIQNLPHETT+MMLQLLFEQYPGFKE+RM+DAKPGIAF+EY DD+Q+++AMQ LQGFKIT
Sbjct: 161 FIQNLPHETTSMMLQLLFEQYPGFKEIRMIDAKPGIAFVEYEDDVQASIAMQPLQGFKIT 220
Query: 183 PQNPMLISYAKK 218
PQNPM+IS+AKK
Sbjct: 221 PQNPMVISFAKK 232
>XP_006410137.1 hypothetical protein EUTSA_v10017204mg [Eutrema salsugineum]
ESQ51590.1 hypothetical protein EUTSA_v10017204mg
[Eutrema salsugineum]
Length = 228
Score = 131 bits (330), Expect = 3e-35
Identities = 60/72 (83%), Positives = 70/72 (97%)
Frame = +3
Query: 3 FIQNLPHETTTMMLQLLFEQYPGFKEVRMVDAKPGIAFIEYVDDMQSTVAMQALQGFKIT 182
FIQNLPHETT++MLQLLF QYPGFKE+RM+DAKPGIAF+EY DD+QS++AMQALQGFKIT
Sbjct: 157 FIQNLPHETTSVMLQLLFAQYPGFKEIRMIDAKPGIAFVEYEDDVQSSMAMQALQGFKIT 216
Query: 183 PQNPMLISYAKK 218
PQNPM+IS+AKK
Sbjct: 217 PQNPMIISFAKK 228
>GAU11229.1 hypothetical protein TSUD_342190 [Trifolium subterraneum]
Length = 160
Score = 129 bits (324), Expect = 3e-35
Identities = 62/72 (86%), Positives = 68/72 (94%)
Frame = +3
Query: 3 FIQNLPHETTTMMLQLLFEQYPGFKEVRMVDAKPGIAFIEYVDDMQSTVAMQALQGFKIT 182
FIQNLP+ETT MMLQ+LF QYPGFKEVRMV+ KPGIAF+EY D+MQSTVAMQALQGFKIT
Sbjct: 89 FIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKIT 148
Query: 183 PQNPMLISYAKK 218
PQNPMLI+YAKK
Sbjct: 149 PQNPMLITYAKK 160
>XP_013450357.1 small nuclear ribonucleoprotein [Medicago truncatula] KEH24385.1
small nuclear ribonucleoprotein [Medicago truncatula]
Length = 161
Score = 129 bits (323), Expect = 5e-35
Identities = 62/72 (86%), Positives = 68/72 (94%)
Frame = +3
Query: 3 FIQNLPHETTTMMLQLLFEQYPGFKEVRMVDAKPGIAFIEYVDDMQSTVAMQALQGFKIT 182
FIQNLP+ETT MMLQ+LF QYPGFKEVRMV+AKPGIAF+EY D+MQSTVAMQALQGFKI
Sbjct: 90 FIQNLPNETTPMMLQMLFLQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQALQGFKIA 149
Query: 183 PQNPMLISYAKK 218
PQNPMLI+YAKK
Sbjct: 150 PQNPMLITYAKK 161
>ADE76200.1 unknown [Picea sitchensis] ADE77712.1 unknown [Picea sitchensis]
Length = 241
Score = 130 bits (328), Expect = 8e-35
Identities = 61/72 (84%), Positives = 69/72 (95%)
Frame = +3
Query: 3 FIQNLPHETTTMMLQLLFEQYPGFKEVRMVDAKPGIAFIEYVDDMQSTVAMQALQGFKIT 182
F+QNLPHETT+MMLQ+LF QY GFKEVRM++AKPGIAF+EY D+MQSTVAMQALQGFKIT
Sbjct: 170 FVQNLPHETTSMMLQMLFCQYHGFKEVRMIEAKPGIAFVEYADEMQSTVAMQALQGFKIT 229
Query: 183 PQNPMLISYAKK 218
PQNPMLI+YAKK
Sbjct: 230 PQNPMLITYAKK 241
>XP_006296407.1 hypothetical protein CARUB_v10025584mg [Capsella rubella]
EOA29305.1 hypothetical protein CARUB_v10025584mg
[Capsella rubella]
Length = 227
Score = 130 bits (326), Expect = 1e-34
Identities = 59/72 (81%), Positives = 70/72 (97%)
Frame = +3
Query: 3 FIQNLPHETTTMMLQLLFEQYPGFKEVRMVDAKPGIAFIEYVDDMQSTVAMQALQGFKIT 182
FIQNLPHETT++MLQLLFEQYPGFKE+RM +AKPGIAF+E+ DD+QS++AMQALQGFKIT
Sbjct: 156 FIQNLPHETTSIMLQLLFEQYPGFKEIRMTEAKPGIAFVEFADDVQSSMAMQALQGFKIT 215
Query: 183 PQNPMLISYAKK 218
PQNPM+IS+AKK
Sbjct: 216 PQNPMVISFAKK 227
>XP_020108948.1 U2 small nuclear ribonucleoprotein B'' [Ananas comosus] OAY85724.1
U2 small nuclear ribonucleoprotein B [Ananas comosus]
Length = 237
Score = 130 bits (326), Expect = 1e-34
Identities = 59/72 (81%), Positives = 70/72 (97%)
Frame = +3
Query: 3 FIQNLPHETTTMMLQLLFEQYPGFKEVRMVDAKPGIAFIEYVDDMQSTVAMQALQGFKIT 182
FIQNLPHETT+MMLQ+LF+QYPGF+EVRM++AKPGIAF+E+ DDMQ++VAMQALQGFKIT
Sbjct: 166 FIQNLPHETTSMMLQILFQQYPGFREVRMIEAKPGIAFVEFGDDMQASVAMQALQGFKIT 225
Query: 183 PQNPMLISYAKK 218
PQNPM I+YAKK
Sbjct: 226 PQNPMAITYAKK 237
>XP_010921064.1 PREDICTED: U2 small nuclear ribonucleoprotein B'' [Elaeis
guineensis]
Length = 240
Score = 129 bits (325), Expect = 2e-34
Identities = 58/72 (80%), Positives = 70/72 (97%)
Frame = +3
Query: 3 FIQNLPHETTTMMLQLLFEQYPGFKEVRMVDAKPGIAFIEYVDDMQSTVAMQALQGFKIT 182
FIQNLPHETT+MMLQ+LF+QYPGF+EVRM++AKPGIAF+E+ DDMQ+++AMQALQGFKIT
Sbjct: 169 FIQNLPHETTSMMLQILFQQYPGFREVRMIEAKPGIAFVEFGDDMQASIAMQALQGFKIT 228
Query: 183 PQNPMLISYAKK 218
PQNPM I+YAKK
Sbjct: 229 PQNPMAITYAKK 240
>XP_008782587.1 PREDICTED: U2 small nuclear ribonucleoprotein B'' [Phoenix
dactylifera]
Length = 240
Score = 129 bits (325), Expect = 2e-34
Identities = 58/72 (80%), Positives = 70/72 (97%)
Frame = +3
Query: 3 FIQNLPHETTTMMLQLLFEQYPGFKEVRMVDAKPGIAFIEYVDDMQSTVAMQALQGFKIT 182
FIQNLPHETT+MMLQ+LF+QYPGF+EVRM++AKPGIAF+E+ DDMQ+++AMQALQGFKIT
Sbjct: 169 FIQNLPHETTSMMLQILFQQYPGFREVRMIEAKPGIAFVEFGDDMQASIAMQALQGFKIT 228
Query: 183 PQNPMLISYAKK 218
PQNPM I+YAKK
Sbjct: 229 PQNPMAITYAKK 240
>XP_009391692.1 PREDICTED: U2 small nuclear ribonucleoprotein B'' [Musa acuminata
subsp. malaccensis] XP_009391693.1 PREDICTED: U2 small
nuclear ribonucleoprotein B'' [Musa acuminata subsp.
malaccensis]
Length = 238
Score = 129 bits (324), Expect = 3e-34
Identities = 57/72 (79%), Positives = 70/72 (97%)
Frame = +3
Query: 3 FIQNLPHETTTMMLQLLFEQYPGFKEVRMVDAKPGIAFIEYVDDMQSTVAMQALQGFKIT 182
FIQNLPHETT+MMLQ+LF+QYPGF EVRM++AKPGIAF+E+ DD+Q+++AMQALQGFKIT
Sbjct: 167 FIQNLPHETTSMMLQILFQQYPGFSEVRMIEAKPGIAFVEFADDVQASIAMQALQGFKIT 226
Query: 183 PQNPMLISYAKK 218
PQNPM+I+YAKK
Sbjct: 227 PQNPMVITYAKK 238
>XP_004494379.1 PREDICTED: U1 small nuclear ribonucleoprotein A isoform X2 [Cicer
arietinum]
Length = 241
Score = 129 bits (324), Expect = 3e-34
Identities = 62/72 (86%), Positives = 68/72 (94%)
Frame = +3
Query: 3 FIQNLPHETTTMMLQLLFEQYPGFKEVRMVDAKPGIAFIEYVDDMQSTVAMQALQGFKIT 182
FIQNLP+ETT MMLQ+LF QYPGFKEVRMV+ KPGIAF+EY D+MQSTVAMQALQGFKIT
Sbjct: 170 FIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKIT 229
Query: 183 PQNPMLISYAKK 218
PQNPMLI+YAKK
Sbjct: 230 PQNPMLITYAKK 241
>XP_019159785.1 PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Ipomoea
nil]
Length = 230
Score = 129 bits (323), Expect = 3e-34
Identities = 59/72 (81%), Positives = 69/72 (95%)
Frame = +3
Query: 3 FIQNLPHETTTMMLQLLFEQYPGFKEVRMVDAKPGIAFIEYVDDMQSTVAMQALQGFKIT 182
FIQNLPHETT+MML++LF QYPGF+EVRM++AKPGIAF+E+ DD+QS+VAMQALQGFKIT
Sbjct: 159 FIQNLPHETTSMMLEVLFNQYPGFREVRMIEAKPGIAFVEFEDDVQSSVAMQALQGFKIT 218
Query: 183 PQNPMLISYAKK 218
PQNPM ISYAKK
Sbjct: 219 PQNPMAISYAKK 230
>XP_012569565.1 PREDICTED: U1 small nuclear ribonucleoprotein A isoform X1 [Cicer
arietinum]
Length = 244
Score = 129 bits (324), Expect = 3e-34
Identities = 62/72 (86%), Positives = 68/72 (94%)
Frame = +3
Query: 3 FIQNLPHETTTMMLQLLFEQYPGFKEVRMVDAKPGIAFIEYVDDMQSTVAMQALQGFKIT 182
FIQNLP+ETT MMLQ+LF QYPGFKEVRMV+ KPGIAF+EY D+MQSTVAMQALQGFKIT
Sbjct: 173 FIQNLPNETTPMMLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKIT 232
Query: 183 PQNPMLISYAKK 218
PQNPMLI+YAKK
Sbjct: 233 PQNPMLITYAKK 244
>XP_019167228.1 PREDICTED: U2 small nuclear ribonucleoprotein B'' [Ipomoea nil]
Length = 231
Score = 129 bits (323), Expect = 3e-34
Identities = 59/72 (81%), Positives = 69/72 (95%)
Frame = +3
Query: 3 FIQNLPHETTTMMLQLLFEQYPGFKEVRMVDAKPGIAFIEYVDDMQSTVAMQALQGFKIT 182
FIQNLPHETT+MML++LF QYPGF+EVRM++AKPGIAF+E+ DD+QS+VAMQALQGFKIT
Sbjct: 160 FIQNLPHETTSMMLEVLFNQYPGFREVRMIEAKPGIAFVEFEDDVQSSVAMQALQGFKIT 219
Query: 183 PQNPMLISYAKK 218
PQNPM ISYAKK
Sbjct: 220 PQNPMAISYAKK 231
>OAP08519.1 U2B'' [Arabidopsis thaliana]
Length = 232
Score = 129 bits (323), Expect = 3e-34
Identities = 59/72 (81%), Positives = 69/72 (95%)
Frame = +3
Query: 3 FIQNLPHETTTMMLQLLFEQYPGFKEVRMVDAKPGIAFIEYVDDMQSTVAMQALQGFKIT 182
FIQNLPHETT+MMLQLLFEQY GFKE+RM+DAKPGIAF+EY DD+Q+++AMQ LQGFKIT
Sbjct: 161 FIQNLPHETTSMMLQLLFEQYLGFKEIRMIDAKPGIAFVEYEDDVQASIAMQPLQGFKIT 220
Query: 183 PQNPMLISYAKK 218
PQNPM+IS+AKK
Sbjct: 221 PQNPMVISFAKK 232
>OAY81346.1 U1 small nuclear ribonucleoprotein A [Ananas comosus]
Length = 170
Score = 127 bits (318), Expect = 4e-34
Identities = 59/72 (81%), Positives = 67/72 (93%)
Frame = +3
Query: 3 FIQNLPHETTTMMLQLLFEQYPGFKEVRMVDAKPGIAFIEYVDDMQSTVAMQALQGFKIT 182
F+QNLPHETT MMLQ+LF QYPGFKEVRM++AKPGIAF+EY D+MQ+TVAMQ LQGFKIT
Sbjct: 99 FVQNLPHETTPMMLQMLFIQYPGFKEVRMIEAKPGIAFVEYGDEMQATVAMQGLQGFKIT 158
Query: 183 PQNPMLISYAKK 218
QNPMLI+YAKK
Sbjct: 159 QQNPMLITYAKK 170
>XP_010545172.1 PREDICTED: U2 small nuclear ribonucleoprotein B'' 2 isoform X2
[Tarenaya hassleriana]
Length = 200
Score = 127 bits (320), Expect = 4e-34
Identities = 58/72 (80%), Positives = 70/72 (97%)
Frame = +3
Query: 3 FIQNLPHETTTMMLQLLFEQYPGFKEVRMVDAKPGIAFIEYVDDMQSTVAMQALQGFKIT 182
F+QNLP ETT+MMLQLLF+QYPGFKE+RM++AKPGIAF+EY DD+QS++AMQALQGFKIT
Sbjct: 129 FVQNLPAETTSMMLQLLFKQYPGFKEIRMIEAKPGIAFVEYEDDVQSSMAMQALQGFKIT 188
Query: 183 PQNPMLISYAKK 218
PQNPM+IS+AKK
Sbjct: 189 PQNPMVISFAKK 200