BLASTX nr result
ID: Ephedra29_contig00014177
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Ephedra29_contig00014177 (395 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ERN14943.1 hypothetical protein AMTR_s00032p00201500 [Amborella ... 56 1e-06 XP_006853476.2 PREDICTED: E3 ubiquitin-protein ligase RFWD3 [Amb... 56 1e-06 OAE25727.1 hypothetical protein AXG93_4368s1870 [Marchantia poly... 55 3e-06 >ERN14943.1 hypothetical protein AMTR_s00032p00201500 [Amborella trichopoda] Length = 316 Score = 56.2 bits (134), Expect = 1e-06 Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 10/124 (8%) Frame = -3 Query: 345 VTVGNHFVLATS-DTPRQINGDTSTH--------GWYCNNG-MTGNVSAHGMTKSTIFTS 196 V++ N + L+ +P QI+ +H G Y G M+ NVS+ M KS I T Sbjct: 190 VSMSNDYALSQPMGSPSQISWREGSHFLLKMEEDGSYQRQGIMSCNVSSVRMPKSAIITL 249 Query: 195 FPPAGGPAYMKSFFAYGDELKKSVSIHDMDSLSVTQLLHPHENQITDLRHCDINGKRIFG 16 +S FAYGDE + V + DM SL V L PH++ + DL++ + G + G Sbjct: 250 EDN-------RSLFAYGDEESRRVCVWDMQSLDVVSRLRPHQDPVLDLKYSNALGMGLLG 302 Query: 15 SISE 4 +SE Sbjct: 303 CVSE 306 >XP_006853476.2 PREDICTED: E3 ubiquitin-protein ligase RFWD3 [Amborella trichopoda] Length = 650 Score = 56.2 bits (134), Expect = 1e-06 Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 10/124 (8%) Frame = -3 Query: 345 VTVGNHFVLATS-DTPRQINGDTSTH--------GWYCNNG-MTGNVSAHGMTKSTIFTS 196 V++ N + L+ +P QI+ +H G Y G M+ NVS+ M KS I T Sbjct: 524 VSMSNDYALSQPMGSPSQISWREGSHFLLKMEEDGSYQRQGIMSCNVSSVRMPKSAIITL 583 Query: 195 FPPAGGPAYMKSFFAYGDELKKSVSIHDMDSLSVTQLLHPHENQITDLRHCDINGKRIFG 16 +S FAYGDE + V + DM SL V L PH++ + DL++ + G + G Sbjct: 584 EDN-------RSLFAYGDEESRRVCVWDMQSLDVVSRLRPHQDPVLDLKYSNALGMGLLG 636 Query: 15 SISE 4 +SE Sbjct: 637 CVSE 640 >OAE25727.1 hypothetical protein AXG93_4368s1870 [Marchantia polymorpha subsp. polymorpha] Length = 1165 Score = 55.1 bits (131), Expect = 3e-06 Identities = 32/89 (35%), Positives = 51/89 (57%) Frame = -3 Query: 267 WYCNNGMTGNVSAHGMTKSTIFTSFPPAGGPAYMKSFFAYGDELKKSVSIHDMDSLSVTQ 88 W M G+ S M +S I P G + +++ FA GDE +V + DM++LSVTQ Sbjct: 1068 WEGGKTMVGHKSTSVMPRSAIIVE--PMSGIS-LRTSFACGDEGTNAVWLWDMNTLSVTQ 1124 Query: 87 LLHPHENQITDLRHCDINGKRIFGSISER 1 L PH++ + D+++ DI + + G ISE+ Sbjct: 1125 TLVPHQSPVLDVKYVDIGERILMGCISEK 1153