BLASTX nr result
ID: Ephedra29_contig00014095
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00014095
(224 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_009347240.1 PREDICTED: pentatricopeptide repeat-containing pr... 97 5e-22
XP_009348084.1 PREDICTED: pentatricopeptide repeat-containing pr... 95 4e-21
XP_011465424.1 PREDICTED: pentatricopeptide repeat-containing pr... 94 7e-21
XP_008803058.1 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide... 94 1e-20
XP_011660274.1 PREDICTED: pentatricopeptide repeat-containing pr... 93 1e-20
JAU88559.1 Pentatricopeptide repeat-containing protein, partial ... 86 2e-20
XP_015165000.1 PREDICTED: pentatricopeptide repeat-containing pr... 89 4e-20
XP_010940859.1 PREDICTED: pentatricopeptide repeat-containing pr... 92 5e-20
XP_007203614.1 hypothetical protein PRUPE_ppa002292mg [Prunus pe... 92 6e-20
XP_008338226.1 PREDICTED: pentatricopeptide repeat-containing pr... 92 6e-20
XP_008241553.2 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide... 91 8e-20
JAT41181.1 Pentatricopeptide repeat-containing protein At2g13600... 91 1e-19
KVH89020.1 hypothetical protein Ccrd_009011, partial [Cynara car... 91 1e-19
OAY48972.1 hypothetical protein MANES_05G019800 [Manihot esculenta] 90 2e-19
XP_002324099.1 hypothetical protein POPTR_0017s12720g [Populus t... 90 2e-19
XP_007047157.2 PREDICTED: pentatricopeptide repeat-containing pr... 90 2e-19
EOX91314.1 Pentatricopeptide repeat (PPR) superfamily protein [T... 90 2e-19
XP_011627407.1 PREDICTED: pentatricopeptide repeat-containing pr... 90 2e-19
XP_009340246.1 PREDICTED: pentatricopeptide repeat-containing pr... 90 3e-19
XP_016513549.1 PREDICTED: pentatricopeptide repeat-containing pr... 90 3e-19
>XP_009347240.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Pyrus x bretschneideri]
Length = 692
Score = 97.4 bits (241), Expect = 5e-22
Identities = 43/74 (58%), Positives = 59/74 (79%)
Frame = +1
Query: 1 RLIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAIS 180
RLIEMYAK GS DA+ VFD+MP R++ SWNT++S AK G++ +A ++FD+MP R+ S
Sbjct: 126 RLIEMYAKCGSIVDAQMVFDEMPERDLCSWNTMISGHAKVGQLAEARKLFDEMPQRDNFS 185
Query: 181 WTAMISGYSKNGRP 222
WTAMISGY+++ RP
Sbjct: 186 WTAMISGYARHDRP 199
>XP_009348084.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Pyrus x bretschneideri]
Length = 692
Score = 95.1 bits (235), Expect = 4e-21
Identities = 42/74 (56%), Positives = 58/74 (78%)
Frame = +1
Query: 1 RLIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAIS 180
RLIEMYAK GS DA+ +FD+MP R++ SWNT++S AK G++ +A ++FD+MP R+ S
Sbjct: 126 RLIEMYAKCGSIVDAQMLFDEMPERDLCSWNTMISGHAKVGQLAEARKLFDEMPQRDNFS 185
Query: 181 WTAMISGYSKNGRP 222
WTAMISGY ++ RP
Sbjct: 186 WTAMISGYVRHDRP 199
>XP_011465424.1 PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Fragaria vesca subsp. vesca]
Length = 673
Score = 94.4 bits (233), Expect = 7e-21
Identities = 42/74 (56%), Positives = 58/74 (78%)
Frame = +1
Query: 1 RLIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAIS 180
R I +YAK GS DA++VFD+MP R++ SWNT++S +AK G++GDA ++FD+MP R+ S
Sbjct: 107 RFINLYAKCGSLVDAQKVFDEMPDRDLCSWNTMISGYAKLGKLGDARKLFDEMPHRDNFS 166
Query: 181 WTAMISGYSKNGRP 222
WTAMISGY + RP
Sbjct: 167 WTAMISGYVWHERP 180
>XP_008803058.1 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g08510-like [Phoenix dactylifera]
Length = 510
Score = 93.6 bits (231), Expect = 1e-20
Identities = 39/72 (54%), Positives = 58/72 (80%)
Frame = +1
Query: 4 LIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAISW 183
L++MYAK+G AR++FD+MP R+++ WN+++ +AK GE+ +A ++FD MP RN ISW
Sbjct: 126 LLDMYAKAGLLASARRLFDEMPHRDLALWNSMIGGYAKCGELAEAKELFDMMPLRNVISW 185
Query: 184 TAMISGYSKNGR 219
T+MISGYS+NGR
Sbjct: 186 TSMISGYSQNGR 197
>XP_011660274.1 PREDICTED: pentatricopeptide repeat-containing protein At5g08510
[Cucumis sativus] KGN66775.1 hypothetical protein
Csa_1G690140 [Cucumis sativus]
Length = 512
Score = 93.2 bits (230), Expect = 1e-20
Identities = 39/72 (54%), Positives = 58/72 (80%)
Frame = +1
Query: 4 LIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAISW 183
L++MYAK G + ARQ+FD+MP R+I +WN+L++ +A+ G M A ++F+KMP RN ISW
Sbjct: 123 LLDMYAKLGMLRSARQLFDEMPVRDIPTWNSLIAGYARSGHMEAALELFNKMPVRNVISW 182
Query: 184 TAMISGYSKNGR 219
TA+ISGY++NG+
Sbjct: 183 TALISGYAQNGK 194
>JAU88559.1 Pentatricopeptide repeat-containing protein, partial [Noccaea
caerulescens]
Length = 83
Score = 85.9 bits (211), Expect = 2e-20
Identities = 36/70 (51%), Positives = 56/70 (80%)
Frame = +1
Query: 1 RLIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAIS 180
RL+ MYAK GS DAR+VFD+MP R++ SWN +++ +A+ G + +A ++FD+MP R++ S
Sbjct: 13 RLLGMYAKCGSLVDARKVFDEMPNRDVCSWNIMVNGYAELGLLEEARKLFDEMPERDSYS 72
Query: 181 WTAMISGYSK 210
WTAM++GY+K
Sbjct: 73 WTAMVTGYAK 82
>XP_015165000.1 PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Solanum tuberosum]
Length = 245
Score = 89.4 bits (220), Expect = 4e-20
Identities = 38/71 (53%), Positives = 55/71 (77%)
Frame = +1
Query: 4 LIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAISW 183
LI+MY K G DAR++FD+MP R++S+WN L++ + K G DA ++F++MP RN +SW
Sbjct: 117 LIDMYVKCGDLIDARKLFDEMPVRDVSTWNVLIAGYMKDGLFKDAEELFEEMPIRNIVSW 176
Query: 184 TAMISGYSKNG 216
TAMISGY++NG
Sbjct: 177 TAMISGYAQNG 187
Score = 51.6 bits (122), Expect = 6e-06
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Frame = +1
Query: 4 LIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNA--- 174
LI Y K G +DA ++F++MP R I SW ++S +A+ G ++ Q+FDKM R++
Sbjct: 148 LIAGYMKDGLFKDAEELFEEMPIRNIVSWTAMISGYAQNGLADESLQLFDKMLDRDSEVR 207
Query: 175 ISWTAMIS 198
+W ++S
Sbjct: 208 PNWVTVMS 215
>XP_010940859.1 PREDICTED: pentatricopeptide repeat-containing protein At5g08510
[Elaeis guineensis]
Length = 510
Score = 91.7 bits (226), Expect = 5e-20
Identities = 38/72 (52%), Positives = 57/72 (79%)
Frame = +1
Query: 4 LIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAISW 183
L++MYAK+G AR++FD+MP R+++ WN+++ +AK GE+ A ++FD MP RN ISW
Sbjct: 126 LLDMYAKAGLLASARRLFDEMPHRDVALWNSMIGGYAKCGELAKAKELFDMMPLRNVISW 185
Query: 184 TAMISGYSKNGR 219
T+MISGYS+NG+
Sbjct: 186 TSMISGYSQNGK 197
>XP_007203614.1 hypothetical protein PRUPE_ppa002292mg [Prunus persica] ONH96601.1
hypothetical protein PRUPE_7G139900 [Prunus persica]
Length = 691
Score = 91.7 bits (226), Expect = 6e-20
Identities = 40/74 (54%), Positives = 59/74 (79%)
Frame = +1
Query: 1 RLIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAIS 180
RLI++YAK GS DA++VFD+M R++ SWNT++S +AK G +G+A ++FD+MP ++ S
Sbjct: 125 RLIDLYAKCGSLVDAQKVFDEMSERDLCSWNTMISGYAKVGLLGEARKLFDEMPEKDNFS 184
Query: 181 WTAMISGYSKNGRP 222
WTAMISGY ++ RP
Sbjct: 185 WTAMISGYVRHERP 198
>XP_008338226.1 PREDICTED: pentatricopeptide repeat-containing protein At4g37170
[Malus domestica]
Length = 692
Score = 91.7 bits (226), Expect = 6e-20
Identities = 40/74 (54%), Positives = 57/74 (77%)
Frame = +1
Query: 1 RLIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAIS 180
RLI MYAK GS DA+ VFD+MP R++ SWNT++S +AK G++ +A ++FD+MP R+ S
Sbjct: 126 RLIXMYAKCGSIVDAQMVFDEMPERDLCSWNTMISGYAKVGQLAEARKLFDEMPQRDNFS 185
Query: 181 WTAMISGYSKNGRP 222
WTA+ISGY ++ P
Sbjct: 186 WTAVISGYVRHDXP 199
>XP_008241553.2 PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g37170 [Prunus mume]
Length = 673
Score = 91.3 bits (225), Expect = 8e-20
Identities = 39/74 (52%), Positives = 59/74 (79%)
Frame = +1
Query: 1 RLIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAIS 180
RLI++YAK GS DA++VFD+M R++ SWNT++ +AK G++G+A ++FD+MP ++ S
Sbjct: 107 RLIDLYAKCGSLVDAQKVFDEMSERDLCSWNTMIVGYAKVGQLGEARKLFDEMPEKDNFS 166
Query: 181 WTAMISGYSKNGRP 222
WTAMISGY ++ RP
Sbjct: 167 WTAMISGYVRHERP 180
>JAT41181.1 Pentatricopeptide repeat-containing protein At2g13600, partial
[Anthurium amnicola]
Length = 560
Score = 90.9 bits (224), Expect = 1e-19
Identities = 39/73 (53%), Positives = 56/73 (76%)
Frame = +1
Query: 4 LIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAISW 183
LI MYA+ G T A QVFD++PTR + SWN+++ FA+ G++ A Q+FD+MP+R+A+SW
Sbjct: 165 LIHMYAQCGRTDRASQVFDRLPTRNVVSWNSMIDGFAECGDVVSARQLFDEMPSRDAVSW 224
Query: 184 TAMISGYSKNGRP 222
+MISGY +NG P
Sbjct: 225 NSMISGYVRNGLP 237
>KVH89020.1 hypothetical protein Ccrd_009011, partial [Cynara cardunculus var.
scolymus]
Length = 801
Score = 90.5 bits (223), Expect = 1e-19
Identities = 38/72 (52%), Positives = 56/72 (77%)
Frame = +1
Query: 4 LIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAISW 183
L++MYAK G ARQVFDKM R++ +WN+L++ +A+ G+M A ++FD+MP +N +SW
Sbjct: 457 LVDMYAKLGFLPSARQVFDKMEMRDVPTWNSLVAGYARNGDMEGASKLFDEMPVKNVVSW 516
Query: 184 TAMISGYSKNGR 219
TAMISGYS+N +
Sbjct: 517 TAMISGYSQNAK 528
>OAY48972.1 hypothetical protein MANES_05G019800 [Manihot esculenta]
Length = 511
Score = 90.1 bits (222), Expect = 2e-19
Identities = 37/71 (52%), Positives = 55/71 (77%)
Frame = +1
Query: 4 LIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAISW 183
L++MYAK G ARQVFD+M R+I +WN L++ ++++G M A ++F +MP+RN +SW
Sbjct: 123 LVDMYAKLGMLVSARQVFDEMTLRDIPTWNALIAGYSRHGNMDGALEIFRQMPSRNVVSW 182
Query: 184 TAMISGYSKNG 216
TAM+SGYS+NG
Sbjct: 183 TAMVSGYSQNG 193
>XP_002324099.1 hypothetical protein POPTR_0017s12720g [Populus trichocarpa]
EEF04232.1 hypothetical protein POPTR_0017s12720g
[Populus trichocarpa]
Length = 676
Score = 90.1 bits (222), Expect = 2e-19
Identities = 40/74 (54%), Positives = 56/74 (75%)
Frame = +1
Query: 1 RLIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAIS 180
RL+EMYAK S D++++FD+MP R++ SWN L+S +AK G + +A +FDKMP R+ S
Sbjct: 110 RLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFS 169
Query: 181 WTAMISGYSKNGRP 222
WTAMISGY ++ RP
Sbjct: 170 WTAMISGYVRHDRP 183
>XP_007047157.2 PREDICTED: pentatricopeptide repeat-containing protein At4g37170
[Theobroma cacao]
Length = 684
Score = 90.1 bits (222), Expect = 2e-19
Identities = 41/74 (55%), Positives = 56/74 (75%)
Frame = +1
Query: 1 RLIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAIS 180
RL++MYAK GS DA+ VFD+M R++ SWNTL+S +AK G + +A ++FD+MP R+ S
Sbjct: 118 RLLDMYAKCGSLADAQNVFDEMSERDLCSWNTLMSGYAKMGMLKEANKLFDEMPERDNFS 177
Query: 181 WTAMISGYSKNGRP 222
WTAMISGY + RP
Sbjct: 178 WTAMISGYVRFDRP 191
>EOX91314.1 Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 684
Score = 90.1 bits (222), Expect = 2e-19
Identities = 41/74 (55%), Positives = 56/74 (75%)
Frame = +1
Query: 1 RLIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAIS 180
RL++MYAK GS DA+ VFD+M R++ SWNTL+S +AK G + +A ++FD+MP R+ S
Sbjct: 118 RLLDMYAKCGSLADAQNVFDEMSERDLCSWNTLMSGYAKMGMLKEANKLFDEMPERDNFS 177
Query: 181 WTAMISGYSKNGRP 222
WTAMISGY + RP
Sbjct: 178 WTAMISGYVRFDRP 191
>XP_011627407.1 PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Amborella trichopoda]
Length = 699
Score = 90.1 bits (222), Expect = 2e-19
Identities = 39/71 (54%), Positives = 55/71 (77%)
Frame = +1
Query: 4 LIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAISW 183
+++ A G + AR VFD+MP R+I+SWNT+LSA+AK G++ +A +VFD+MP RN +SW
Sbjct: 193 IVKSSANRGDIETARNVFDEMPERDIASWNTMLSAYAKMGDIKNARKVFDEMPQRNLVSW 252
Query: 184 TAMISGYSKNG 216
AMI+GY KNG
Sbjct: 253 NAMIAGYEKNG 263
Score = 62.4 bits (150), Expect = 1e-09
Identities = 29/71 (40%), Positives = 42/71 (59%)
Frame = +1
Query: 4 LIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAISW 183
LI+MY K G + A VF+K +SWN ++ + A G++ A VFD+MP R+ SW
Sbjct: 162 LIDMYLKCGDFESAMLVFEKTQNPNSTSWNLIVKSSANRGDIETARNVFDEMPERDIASW 221
Query: 184 TAMISGYSKNG 216
M+S Y+K G
Sbjct: 222 NTMLSAYAKMG 232
Score = 52.8 bits (125), Expect = 3e-06
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Frame = +1
Query: 4 LIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTR----N 171
L++MYAK G + AR+VF+ M R+++SWN ++ A +G DA +F M N
Sbjct: 426 LVDMYAKCGDLKRAREVFNGMTNRDVASWNAMIRGLAMHGHGNDALSLFSMMEIEGTAPN 485
Query: 172 AISWTAMISGYSKNG 216
I++ +++ S G
Sbjct: 486 CITFIGVLNACSHEG 500
Score = 52.0 bits (123), Expect = 5e-06
Identities = 21/51 (41%), Positives = 35/51 (68%)
Frame = +1
Query: 70 TREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAISWTAMISGYSKNGRP 222
++ S T+++ AK+G + +A QVFD+MP R+ + W AMI GY++N +P
Sbjct: 316 SKSFSLLTTVMNLHAKFGRLREARQVFDEMPKRDVVVWNAMIGGYAQNQKP 366
>XP_009340246.1 PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Pyrus x bretschneideri] XP_009340251.1
PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Pyrus x bretschneideri]
Length = 611
Score = 89.7 bits (221), Expect = 3e-19
Identities = 35/71 (49%), Positives = 56/71 (78%)
Frame = +1
Query: 4 LIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAISW 183
+++ YAK G +DAR+VFD MP +++ W TL+S +AK+G+M A ++F++MP +N +SW
Sbjct: 232 VVDAYAKCGEMRDARKVFDSMPVKDVLVWTTLVSGYAKFGDMESASELFNRMPEKNPVSW 291
Query: 184 TAMISGYSKNG 216
TA+ISGY++NG
Sbjct: 292 TAVISGYARNG 302
Score = 75.9 bits (185), Expect = 2e-14
Identities = 32/71 (45%), Positives = 48/71 (67%)
Frame = +1
Query: 4 LIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAISW 183
LI MY K +AR+VFDKM R + SWN +LS +AK ++ +A +FDKMP ++ +SW
Sbjct: 100 LINMYFKCADDVEARRVFDKMAVRNLYSWNNMLSGYAKMRKLSEARSLFDKMPEKDVVSW 159
Query: 184 TAMISGYSKNG 216
M+ GY+++G
Sbjct: 160 NTMVIGYAQSG 170
>XP_016513549.1 PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Nicotiana tabacum]
Length = 639
Score = 89.7 bits (221), Expect = 3e-19
Identities = 40/71 (56%), Positives = 54/71 (76%)
Frame = +1
Query: 4 LIEMYAKSGSTQDARQVFDKMPTREISSWNTLLSAFAKYGEMGDACQVFDKMPTRNAISW 183
LI+MY K G DAR+ FD+MP R++SSWN L++ + K G A ++F+KMPTRN +SW
Sbjct: 158 LIDMYVKCGDLFDARKQFDEMPVRDVSSWNALIAGYMKDGLFKYAEELFEKMPTRNIVSW 217
Query: 184 TAMISGYSKNG 216
TAMISGY++NG
Sbjct: 218 TAMISGYAQNG 228