BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00013904
         (822 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ERN08011.1 hypothetical protein AMTR_s00012p00256750 [Amborella ...    77   9e-14
XP_010535450.1 PREDICTED: transcription initiation factor IIA la...    80   9e-14
XP_016503520.1 PREDICTED: transcription initiation factor IIA su...    73   4e-13
EEE63112.1 hypothetical protein OsJ_17920 [Oryza sativa Japonica...    78   7e-13
XP_015640793.1 PREDICTED: transcription initiation factor IIA su...    78   1e-12
XP_015640794.1 PREDICTED: transcription initiation factor IIA su...    78   1e-12
XP_011624137.1 PREDICTED: transcription initiation factor IIA la...    77   1e-12
XP_004962494.2 PREDICTED: transcription initiation factor IIA su...    77   1e-12
EPS64961.1 hypothetical protein M569_09817, partial [Genlisea au...    73   1e-12
AQK84830.1 Transcription factor IIA alpha/beta subunit [Zea mays]      75   2e-12
KQL16117.1 hypothetical protein SETIT_021779mg [Setaria italica]       77   2e-12
XP_006654234.1 PREDICTED: transcription initiation factor IIA su...    77   2e-12
ONK76902.1 uncharacterized protein A4U43_C02F1080 [Asparagus off...    77   2e-12
ERM94925.1 hypothetical protein AMTR_s00009p00180870 [Amborella ...    74   3e-12
XP_018632353.1 PREDICTED: transcription initiation factor IIA la...    76   3e-12
ACN31103.1 unknown [Zea mays]                                          76   3e-12
XP_009622244.1 PREDICTED: transcription initiation factor IIA la...    76   3e-12
NP_001148644.2 transcription factor/ transcription initiation fa...    76   4e-12
XP_008654956.1 PREDICTED: transcription factor/ transcription in...    76   4e-12
XP_011624136.1 PREDICTED: transcription initiation factor IIA la...    76   4e-12

>ERN08011.1 hypothetical protein AMTR_s00012p00256750 [Amborella trichopoda]
          Length = 175

 Score = 77.4 bits (189), Expect = 9e-14
 Identities = 50/113 (44%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
 Frame = -2

Query: 701 IPQLDGADDYSVVNLDNNRDSNVPVEQDFLA----INNGRKESANDGYXXXXXXXXXXXX 534
           IPQ DG DD + ++   N D N P+  D L     I   R                    
Sbjct: 58  IPQKDGIDD-NYLDGFVNEDYNTPLNHDPLQGIHNIGTPRPTKTEATDDDEPPLNEDDDD 116

Query: 533 XXXXXXXXXXEPNTTDLVVAQFEKVSRTKSRWKCTLKDGIMHLNQRDILFSKA 375
                     EP+T  LV+AQFEKV+RTKSRWKCTLKDGIMHLN +DILF+KA
Sbjct: 117 DIDDFEQGDDEPSTHHLVLAQFEKVTRTKSRWKCTLKDGIMHLNSKDILFTKA 169


>XP_010535450.1 PREDICTED: transcription initiation factor IIA large subunit-like
           [Tarenaya hassleriana]
          Length = 361

 Score = 80.5 bits (197), Expect = 9e-14
 Identities = 46/106 (43%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
 Frame = -2

Query: 686 GADDYSVVNLD--NNRDSNVPVEQDFLAINNGRKESANDGYXXXXXXXXXXXXXXXXXXX 513
           G +DY++VN    N   +N PV      + N RKE   D                     
Sbjct: 255 GNEDYNIVNTPAPNELPANTPVP-----VQNERKEEEEDDDDDEILNEDDDDEEDLDDID 309

Query: 512 XXXEPNTTDLVVAQFEKVSRTKSRWKCTLKDGIMHLNQRDILFSKA 375
              + NT  LV+AQF+KV+RTKSRWKCTLKDGIMH+N +DILF+KA
Sbjct: 310 GEEDMNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA 355


>XP_016503520.1 PREDICTED: transcription initiation factor IIA subunit 1-like
           [Nicotiana tabacum]
          Length = 86

 Score = 73.2 bits (178), Expect = 4e-13
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = -2

Query: 497 NTTDLVVAQFEKVSRTKSRWKCTLKDGIMHLNQRDILFSKA 375
           NT  LV+AQF+KV+RTKSRWKCTLKDGIMH+N +DILF+KA
Sbjct: 40  NTAHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA 80


>EEE63112.1 hypothetical protein OsJ_17920 [Oryza sativa Japonica Group]
          Length = 331

 Score = 77.8 bits (190), Expect = 7e-13
 Identities = 61/162 (37%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
 Frame = -2

Query: 821 DYHVEFPQSKEAMFNLYS----KQGTRKNIPNPISINKGKLDNNIPQLDGADDYS---VV 663
           D  VEF  SK+    L+S    KQGT        S  +  +   IPQ DG DDY+     
Sbjct: 167 DQIVEFVVSKDNAQQLWSSIVNKQGTATK---ESSTKETIIAPTIPQRDGMDDYNDPFYF 223

Query: 662 NLDNNRDSNVPVEQDFL-----AINNGR-KESANDGYXXXXXXXXXXXXXXXXXXXXXXE 501
                 D N P E         A+   + +    D                        E
Sbjct: 224 QGVPTEDYNTPGESSEYRAPTPAVGTPKPRNDVGDDDEPPLNEDDDDDDELDDLEQGEDE 283

Query: 500 PNTTDLVVAQFEKVSRTKSRWKCTLKDGIMHLNQRDILFSKA 375
           PNT  LV+AQF+KV+RTK+RWKCTLKDGIMHLN RD+LF+KA
Sbjct: 284 PNTQHLVLAQFDKVTRTKNRWKCTLKDGIMHLNGRDVLFNKA 325


>XP_015640793.1 PREDICTED: transcription initiation factor IIA subunit 1 isoform X1
           [Oryza sativa Japonica Group] BAF17015.1 Os05g0292200
           [Oryza sativa Japonica Group] EAY97386.1 hypothetical
           protein OsI_19309 [Oryza sativa Indica Group] BAG89493.1
           unnamed protein product [Oryza sativa Japonica Group]
           BAS93169.1 Os05g0292200 [Oryza sativa Japonica Group]
          Length = 394

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 61/162 (37%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
 Frame = -2

Query: 821 DYHVEFPQSKEAMFNLYS----KQGTRKNIPNPISINKGKLDNNIPQLDGADDYS---VV 663
           D  VEF  SK+    L+S    KQGT        S  +  +   IPQ DG DDY+     
Sbjct: 230 DQIVEFVVSKDNAQQLWSSIVNKQGTATK---ESSTKETIIAPTIPQRDGMDDYNDPFYF 286

Query: 662 NLDNNRDSNVPVEQDFL-----AINNGR-KESANDGYXXXXXXXXXXXXXXXXXXXXXXE 501
                 D N P E         A+   + +    D                        E
Sbjct: 287 QGVPTEDYNTPGESSEYRAPTPAVGTPKPRNDVGDDDEPPLNEDDDDDDELDDLEQGEDE 346

Query: 500 PNTTDLVVAQFEKVSRTKSRWKCTLKDGIMHLNQRDILFSKA 375
           PNT  LV+AQF+KV+RTK+RWKCTLKDGIMHLN RD+LF+KA
Sbjct: 347 PNTQHLVLAQFDKVTRTKNRWKCTLKDGIMHLNGRDVLFNKA 388


>XP_015640794.1 PREDICTED: transcription initiation factor IIA subunit 1 isoform X2
           [Oryza sativa Japonica Group]
          Length = 435

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 61/162 (37%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
 Frame = -2

Query: 821 DYHVEFPQSKEAMFNLYS----KQGTRKNIPNPISINKGKLDNNIPQLDGADDYS---VV 663
           D  VEF  SK+    L+S    KQGT        S  +  +   IPQ DG DDY+     
Sbjct: 271 DQIVEFVVSKDNAQQLWSSIVNKQGTATK---ESSTKETIIAPTIPQRDGMDDYNDPFYF 327

Query: 662 NLDNNRDSNVPVEQDFL-----AINNGR-KESANDGYXXXXXXXXXXXXXXXXXXXXXXE 501
                 D N P E         A+   + +    D                        E
Sbjct: 328 QGVPTEDYNTPGESSEYRAPTPAVGTPKPRNDVGDDDEPPLNEDDDDDDELDDLEQGEDE 387

Query: 500 PNTTDLVVAQFEKVSRTKSRWKCTLKDGIMHLNQRDILFSKA 375
           PNT  LV+AQF+KV+RTK+RWKCTLKDGIMHLN RD+LF+KA
Sbjct: 388 PNTQHLVLAQFDKVTRTKNRWKCTLKDGIMHLNGRDVLFNKA 429


>XP_011624137.1 PREDICTED: transcription initiation factor IIA large subunit
           isoform X2 [Amborella trichopoda]
          Length = 375

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 50/113 (44%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
 Frame = -2

Query: 701 IPQLDGADDYSVVNLDNNRDSNVPVEQDFLA----INNGRKESANDGYXXXXXXXXXXXX 534
           IPQ DG DD + ++   N D N P+  D L     I   R                    
Sbjct: 258 IPQKDGIDD-NYLDGFVNEDYNTPLNHDPLQGIHNIGTPRPTKTEATDDDEPPLNEDDDD 316

Query: 533 XXXXXXXXXXEPNTTDLVVAQFEKVSRTKSRWKCTLKDGIMHLNQRDILFSKA 375
                     EP+T  LV+AQFEKV+RTKSRWKCTLKDGIMHLN +DILF+KA
Sbjct: 317 DIDDFEQGDDEPSTHHLVLAQFEKVTRTKSRWKCTLKDGIMHLNSKDILFTKA 369


>XP_004962494.2 PREDICTED: transcription initiation factor IIA subunit 1-like
           [Setaria italica]
          Length = 387

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 62/164 (37%), Positives = 74/164 (45%), Gaps = 15/164 (9%)
 Frame = -2

Query: 821 DYHVEFPQSKEAMFNLYS----KQGTRKNIPNPISINKGKLDNNIPQLDGA-DDYSVVNL 657
           D  VEF  SKE    L+S    KQ T      P+          IPQ DG  DDY+    
Sbjct: 228 DQIVEFAVSKENAHQLWSSIMNKQETSTKSVTPV----------IPQRDGIQDDYNDQFF 277

Query: 656 DNN---RDSNVPVEQ-------DFLAINNGRKESANDGYXXXXXXXXXXXXXXXXXXXXX 507
                  D N P E          +A    R +  +D                       
Sbjct: 278 FPGVPTEDYNTPGESAEYRAPTPAVATPKPRNDEGDDDDEPPLNEDDDDDDELDDLEQGE 337

Query: 506 XEPNTTDLVVAQFEKVSRTKSRWKCTLKDGIMHLNQRDILFSKA 375
            EPNT  LV+AQF+KV+RTK+RWKCTLKDGIMHLN RD+LF+KA
Sbjct: 338 DEPNTQHLVLAQFDKVTRTKNRWKCTLKDGIMHLNGRDVLFNKA 381


>EPS64961.1 hypothetical protein M569_09817, partial [Genlisea aurea]
          Length = 135

 Score = 73.2 bits (178), Expect = 1e-12
 Identities = 32/41 (78%), Positives = 38/41 (92%)
 Frame = -2

Query: 497 NTTDLVVAQFEKVSRTKSRWKCTLKDGIMHLNQRDILFSKA 375
           NTT LV+AQF+KV+RTKSRWKC LKDGIMH+N +DILF+KA
Sbjct: 89  NTTHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKA 129


>AQK84830.1 Transcription factor IIA alpha/beta subunit [Zea mays]
          Length = 230

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 33/42 (78%), Positives = 39/42 (92%)
 Frame = -2

Query: 500 PNTTDLVVAQFEKVSRTKSRWKCTLKDGIMHLNQRDILFSKA 375
           PNT  LV+AQF+KV+RTK+RWKCTLKDGIMHLN RD+LF+KA
Sbjct: 183 PNTQHLVLAQFDKVTRTKNRWKCTLKDGIMHLNGRDVLFNKA 224


>KQL16117.1 hypothetical protein SETIT_021779mg [Setaria italica]
          Length = 515

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 62/164 (37%), Positives = 74/164 (45%), Gaps = 15/164 (9%)
 Frame = -2

Query: 821 DYHVEFPQSKEAMFNLYS----KQGTRKNIPNPISINKGKLDNNIPQLDGA-DDYSVVNL 657
           D  VEF  SKE    L+S    KQ T      P+          IPQ DG  DDY+    
Sbjct: 356 DQIVEFAVSKENAHQLWSSIMNKQETSTKSVTPV----------IPQRDGIQDDYNDQFF 405

Query: 656 DNN---RDSNVPVEQ-------DFLAINNGRKESANDGYXXXXXXXXXXXXXXXXXXXXX 507
                  D N P E          +A    R +  +D                       
Sbjct: 406 FPGVPTEDYNTPGESAEYRAPTPAVATPKPRNDEGDDDDEPPLNEDDDDDDELDDLEQGE 465

Query: 506 XEPNTTDLVVAQFEKVSRTKSRWKCTLKDGIMHLNQRDILFSKA 375
            EPNT  LV+AQF+KV+RTK+RWKCTLKDGIMHLN RD+LF+KA
Sbjct: 466 DEPNTQHLVLAQFDKVTRTKNRWKCTLKDGIMHLNGRDVLFNKA 509


>XP_006654234.1 PREDICTED: transcription initiation factor IIA subunit 1-like
           [Oryza brachyantha]
          Length = 394

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 60/159 (37%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
 Frame = -2

Query: 821 DYHVEFPQSKEAMFNLYSKQGTRKNIPNPISINKGK-LDNNIPQLDGADDYS---VVNLD 654
           D  VEF  SK     L+S    +K      S  K   +   IPQ DG DDY+        
Sbjct: 230 DQIVEFAVSKNNAQQLWSSIVNKKGTAAKGSSTKETTMAPIIPQRDGMDDYNDPFYFQGV 289

Query: 653 NNRDSNVPVEQDFL-----AINNGR-KESANDGYXXXXXXXXXXXXXXXXXXXXXXEPNT 492
              D N P E         A+   + +  A D                        EPNT
Sbjct: 290 PTEDYNTPGESSEYRAPTPAVGTPKPRNDAGDDDEPPLNEDDDDDDELDDLEQGEDEPNT 349

Query: 491 TDLVVAQFEKVSRTKSRWKCTLKDGIMHLNQRDILFSKA 375
             LV+AQF+KV+RTK+RWKCTLKDGIMHLN RD+LF+KA
Sbjct: 350 QHLVLAQFDKVTRTKNRWKCTLKDGIMHLNGRDVLFNKA 388


>ONK76902.1 uncharacterized protein A4U43_C02F1080 [Asparagus officinalis]
          Length = 386

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 35/42 (83%), Positives = 39/42 (92%)
 Frame = -2

Query: 500 PNTTDLVVAQFEKVSRTKSRWKCTLKDGIMHLNQRDILFSKA 375
           P+T  LV+AQF+KVSRTKSRWKCTLKDGIMHLN RDILF+KA
Sbjct: 339 PHTQHLVLAQFDKVSRTKSRWKCTLKDGIMHLNSRDILFNKA 380


>ERM94925.1 hypothetical protein AMTR_s00009p00180870 [Amborella trichopoda]
          Length = 178

 Score = 73.6 bits (179), Expect = 3e-12
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = -2

Query: 500 PNTTDLVVAQFEKVSRTKSRWKCTLKDGIMHLNQRDILFSKA 375
           P+T DLV+AQFEKVSRTKSRWKC LKDGIM LN RD LF+KA
Sbjct: 131 PSTDDLVLAQFEKVSRTKSRWKCILKDGIMRLNNRDFLFNKA 172


>XP_018632353.1 PREDICTED: transcription initiation factor IIA large subunit-like
           isoform X2 [Nicotiana tomentosiformis]
          Length = 345

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 57/159 (35%), Positives = 71/159 (44%), Gaps = 16/159 (10%)
 Frame = -2

Query: 803 PQSKEAMFNLYS--KQGTRKNIPNPISINKGKLDNNIPQLDGADDY-------------- 672
           PQ   A  ++Y   K G   NI   +  +     + IPQ+DG  D+              
Sbjct: 183 PQQDGAADSIYDIMKDGEGSNIQLELVTSIQAASSRIPQVDGPTDHYDEALSTPNIYGYQ 242

Query: 671 SVVNLDNNRDSNVPVEQDFLAINNGRKESANDGYXXXXXXXXXXXXXXXXXXXXXXEPNT 492
            VVN D N   N P   D  A         ND                        + NT
Sbjct: 243 GVVNEDYNI-VNTPAPNDMQAPTPA-PVLQNDDVDDDDEPLNENDDDDFDDVDQGEDLNT 300

Query: 491 TDLVVAQFEKVSRTKSRWKCTLKDGIMHLNQRDILFSKA 375
             LV+AQF+KV+RTKSRWKCTLKDGIMH+N +DILF+KA
Sbjct: 301 AHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA 339


>ACN31103.1 unknown [Zea mays]
          Length = 390

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 34/42 (80%), Positives = 39/42 (92%)
 Frame = -2

Query: 500 PNTTDLVVAQFEKVSRTKSRWKCTLKDGIMHLNQRDILFSKA 375
           PNT  LV+AQF+KVSRTK+RWKCTLKDGIMHLN RD+LF+KA
Sbjct: 343 PNTQHLVLAQFDKVSRTKNRWKCTLKDGIMHLNGRDVLFNKA 384


>XP_009622244.1 PREDICTED: transcription initiation factor IIA large subunit-like
           isoform X1 [Nicotiana tomentosiformis]
          Length = 401

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 57/159 (35%), Positives = 71/159 (44%), Gaps = 16/159 (10%)
 Frame = -2

Query: 803 PQSKEAMFNLYS--KQGTRKNIPNPISINKGKLDNNIPQLDGADDY-------------- 672
           PQ   A  ++Y   K G   NI   +  +     + IPQ+DG  D+              
Sbjct: 239 PQQDGAADSIYDIMKDGEGSNIQLELVTSIQAASSRIPQVDGPTDHYDEALSTPNIYGYQ 298

Query: 671 SVVNLDNNRDSNVPVEQDFLAINNGRKESANDGYXXXXXXXXXXXXXXXXXXXXXXEPNT 492
            VVN D N   N P   D  A         ND                        + NT
Sbjct: 299 GVVNEDYNI-VNTPAPNDMQAPTPA-PVLQNDDVDDDDEPLNENDDDDFDDVDQGEDLNT 356

Query: 491 TDLVVAQFEKVSRTKSRWKCTLKDGIMHLNQRDILFSKA 375
             LV+AQF+KV+RTKSRWKCTLKDGIMH+N +DILF+KA
Sbjct: 357 AHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA 395


>NP_001148644.2 transcription factor/ transcription initiation factor [Zea mays]
           AQK92902.1 Transcription factor IIA alpha/beta subunit
           [Zea mays]
          Length = 434

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 34/42 (80%), Positives = 39/42 (92%)
 Frame = -2

Query: 500 PNTTDLVVAQFEKVSRTKSRWKCTLKDGIMHLNQRDILFSKA 375
           PNT  LV+AQF+KVSRTK+RWKCTLKDGIMHLN RD+LF+KA
Sbjct: 387 PNTQHLVLAQFDKVSRTKNRWKCTLKDGIMHLNGRDVLFNKA 428


>XP_008654956.1 PREDICTED: transcription factor/ transcription initiation factor
           isoform X1 [Zea mays]
          Length = 437

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 34/42 (80%), Positives = 39/42 (92%)
 Frame = -2

Query: 500 PNTTDLVVAQFEKVSRTKSRWKCTLKDGIMHLNQRDILFSKA 375
           PNT  LV+AQF+KVSRTK+RWKCTLKDGIMHLN RD+LF+KA
Sbjct: 390 PNTQHLVLAQFDKVSRTKNRWKCTLKDGIMHLNGRDVLFNKA 431


>XP_011624136.1 PREDICTED: transcription initiation factor IIA large subunit
           isoform X1 [Amborella trichopoda]
          Length = 378

 Score = 75.9 bits (185), Expect = 4e-12
 Identities = 49/112 (43%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
 Frame = -2

Query: 701 IPQLDGADDYSVVNLDNNRDSNVPVEQDFLA----INNGRKESANDGYXXXXXXXXXXXX 534
           IPQ DG DD + ++   N D N P+  D L     I   R                    
Sbjct: 258 IPQKDGIDD-NYLDGFVNEDYNTPLNHDPLQGIHNIGTPRPTKTEATDDDEPPLNEDDDD 316

Query: 533 XXXXXXXXXXEPNTTDLVVAQFEKVSRTKSRWKCTLKDGIMHLNQRDILFSK 378
                     EP+T  LV+AQFEKV+RTKSRWKCTLKDGIMHLN +DILF+K
Sbjct: 317 DIDDFEQGDDEPSTHHLVLAQFEKVTRTKSRWKCTLKDGIMHLNSKDILFTK 368