BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00013889
         (777 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KMZ71623.1 hypothetical protein ZOSMA_178G00110 [Zostera marina]      117   2e-28
XP_020168339.1 probable mediator of RNA polymerase II transcript...   115   5e-28
EMT04625.1 hypothetical protein F775_02658 [Aegilops tauschii]        115   6e-28
XP_020168338.1 probable mediator of RNA polymerase II transcript...   115   6e-28
XP_003577391.1 PREDICTED: probable mediator of RNA polymerase II...   114   1e-27
XP_020174060.1 probable mediator of RNA polymerase II transcript...   114   2e-27
XP_020174059.1 probable mediator of RNA polymerase II transcript...   114   2e-27
EMS61921.1 hypothetical protein TRIUR3_22723 [Triticum urartu]        114   3e-27
XP_012700203.1 PREDICTED: mediator of RNA polymerase II transcri...   110   6e-26
XP_015618164.1 PREDICTED: mediator of RNA polymerase II transcri...   110   7e-26
XP_006664203.1 PREDICTED: mediator of RNA polymerase II transcri...   110   7e-26
EEC69671.1 hypothetical protein OsI_39104 [Oryza sativa Indica G...   110   9e-26
XP_015618161.1 PREDICTED: mediator of RNA polymerase II transcri...   110   9e-26
BAF30286.1 Os12g0614000, partial [Oryza sativa Japonica Group]        110   1e-25
XP_015698828.1 PREDICTED: mediator of RNA polymerase II transcri...   110   2e-25
KXG23999.1 hypothetical protein SORBI_008G170000 [Sorghum bicolor]    108   2e-25
XP_006664202.1 PREDICTED: mediator of RNA polymerase II transcri...   110   2e-25
JAT56232.1 TRAF3-interacting protein 1 [Anthurium amnicola]           108   3e-25
XP_008672425.1 PREDICTED: uncharacterized protein LOC100273335 i...   108   3e-25
NP_001141248.1 uncharacterized protein LOC100273335 [Zea mays] A...   108   3e-25

>KMZ71623.1 hypothetical protein ZOSMA_178G00110 [Zostera marina]
          Length = 213

 Score =  117 bits (292), Expect = 2e-28
 Identities = 54/99 (54%), Positives = 79/99 (79%), Gaps = 1/99 (1%)
 Frame = +3

Query: 483 PKELSGSFDLIPQLGLQIYHDAYSKQTLAASIAQTHYLQNIVGDTELRKGEGMELMQCIH 662
           P+EL+GS DLI    L ++HD + K++L +SI+ THYL ++VG+TE+RKG+GMEL Q  H
Sbjct: 13  PRELTGSVDLINYYKLHLHHDFFCKRSLPSSISDTHYLHSVVGETEIRKGDGMELDQLFH 72

Query: 663 N-LRMRDRISQIKPFDLEVLRQAFELRESGPIKLSEADK 776
           N +  RDRI++I+PFDL++L++AF+LRES P++L  ADK
Sbjct: 73  NPMHFRDRIARIQPFDLDILKEAFQLRESSPVELPLADK 111


>XP_020168339.1 probable mediator of RNA polymerase II transcription subunit 19b
           isoform X2 [Aegilops tauschii subsp. tauschii]
          Length = 203

 Score =  115 bits (288), Expect = 5e-28
 Identities = 54/98 (55%), Positives = 73/98 (74%)
 Frame = +3

Query: 483 PKELSGSFDLIPQLGLQIYHDAYSKQTLAASIAQTHYLQNIVGDTELRKGEGMELMQCIH 662
           P+EL+G+ DLI Q  LQ +HD + K+ L  +I+ THYL N+VGDTE+RKGEGMEL Q + 
Sbjct: 12  PRELTGAVDLISQYKLQPHHDFFCKRPLPLAISDTHYLHNVVGDTEIRKGEGMELDQLVQ 71

Query: 663 NLRMRDRISQIKPFDLEVLRQAFELRESGPIKLSEADK 776
           N  +RD+ + IKPFD+E L QAF+LRE+ P+ L  A+K
Sbjct: 72  NAYLRDKPAYIKPFDMETLGQAFQLREAAPVDLPSAEK 109


>EMT04625.1 hypothetical protein F775_02658 [Aegilops tauschii]
          Length = 211

 Score =  115 bits (288), Expect = 6e-28
 Identities = 54/98 (55%), Positives = 73/98 (74%)
 Frame = +3

Query: 483 PKELSGSFDLIPQLGLQIYHDAYSKQTLAASIAQTHYLQNIVGDTELRKGEGMELMQCIH 662
           P+EL+G+ DLI Q  LQ +HD + K+ L  +I+ THYL N+VGDTE+RKGEGMEL Q + 
Sbjct: 12  PRELTGAVDLISQYKLQPHHDFFCKRPLPLAISDTHYLHNVVGDTEIRKGEGMELDQLVQ 71

Query: 663 NLRMRDRISQIKPFDLEVLRQAFELRESGPIKLSEADK 776
           N  +RD+ + IKPFD+E L QAF+LRE+ P+ L  A+K
Sbjct: 72  NAYLRDKPAYIKPFDMETLGQAFQLREAAPVDLPSAEK 109


>XP_020168338.1 probable mediator of RNA polymerase II transcription subunit 19b
           isoform X1 [Aegilops tauschii subsp. tauschii]
          Length = 213

 Score =  115 bits (288), Expect = 6e-28
 Identities = 54/98 (55%), Positives = 73/98 (74%)
 Frame = +3

Query: 483 PKELSGSFDLIPQLGLQIYHDAYSKQTLAASIAQTHYLQNIVGDTELRKGEGMELMQCIH 662
           P+EL+G+ DLI Q  LQ +HD + K+ L  +I+ THYL N+VGDTE+RKGEGMEL Q + 
Sbjct: 12  PRELTGAVDLISQYKLQPHHDFFCKRPLPLAISDTHYLHNVVGDTEIRKGEGMELDQLVQ 71

Query: 663 NLRMRDRISQIKPFDLEVLRQAFELRESGPIKLSEADK 776
           N  +RD+ + IKPFD+E L QAF+LRE+ P+ L  A+K
Sbjct: 72  NAYLRDKPAYIKPFDMETLGQAFQLREAAPVDLPSAEK 109


>XP_003577391.1 PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 19b [Brachypodium distachyon] KQJ85790.1
           hypothetical protein BRADI_4g01710 [Brachypodium
           distachyon]
          Length = 205

 Score =  114 bits (285), Expect = 1e-27
 Identities = 54/98 (55%), Positives = 73/98 (74%)
 Frame = +3

Query: 483 PKELSGSFDLIPQLGLQIYHDAYSKQTLAASIAQTHYLQNIVGDTELRKGEGMELMQCIH 662
           P+EL+G+ DLI Q  LQ +HD + K+ L  +I+ THYL N+VGDTE+RKGEGMEL Q I 
Sbjct: 12  PRELTGAVDLISQYKLQPHHDFFCKRPLPLAISDTHYLHNVVGDTEIRKGEGMELDQLIQ 71

Query: 663 NLRMRDRISQIKPFDLEVLRQAFELRESGPIKLSEADK 776
           N  +RD+ + I+PFD+E L QAF+LRE+ P+ L  A+K
Sbjct: 72  NAYLRDKPAYIQPFDMETLGQAFQLRETAPVDLPSAEK 109


>XP_020174060.1 probable mediator of RNA polymerase II transcription subunit 19b
           isoform X2 [Aegilops tauschii subsp. tauschii]
          Length = 203

 Score =  114 bits (284), Expect = 2e-27
 Identities = 53/98 (54%), Positives = 72/98 (73%)
 Frame = +3

Query: 483 PKELSGSFDLIPQLGLQIYHDAYSKQTLAASIAQTHYLQNIVGDTELRKGEGMELMQCIH 662
           P+EL+G+ DLI Q  L+ +HD + K+ L  +I+ THYL N+VGDTE+RKGEGMEL Q + 
Sbjct: 12  PRELTGAVDLISQYKLEPHHDFFCKRPLPLAISDTHYLHNVVGDTEIRKGEGMELDQLVQ 71

Query: 663 NLRMRDRISQIKPFDLEVLRQAFELRESGPIKLSEADK 776
           N  +RD+   IKPFD+E L QAF+LRE+ P+ L  A+K
Sbjct: 72  NAYLRDKPPSIKPFDMETLGQAFQLRETAPVDLPSAEK 109


>XP_020174059.1 probable mediator of RNA polymerase II transcription subunit 19b
           isoform X1 [Aegilops tauschii subsp. tauschii]
          Length = 213

 Score =  114 bits (284), Expect = 2e-27
 Identities = 53/98 (54%), Positives = 72/98 (73%)
 Frame = +3

Query: 483 PKELSGSFDLIPQLGLQIYHDAYSKQTLAASIAQTHYLQNIVGDTELRKGEGMELMQCIH 662
           P+EL+G+ DLI Q  L+ +HD + K+ L  +I+ THYL N+VGDTE+RKGEGMEL Q + 
Sbjct: 12  PRELTGAVDLISQYKLEPHHDFFCKRPLPLAISDTHYLHNVVGDTEIRKGEGMELDQLVQ 71

Query: 663 NLRMRDRISQIKPFDLEVLRQAFELRESGPIKLSEADK 776
           N  +RD+   IKPFD+E L QAF+LRE+ P+ L  A+K
Sbjct: 72  NAYLRDKPPSIKPFDMETLGQAFQLRETAPVDLPSAEK 109


>EMS61921.1 hypothetical protein TRIUR3_22723 [Triticum urartu]
          Length = 217

 Score =  114 bits (284), Expect = 3e-27
 Identities = 53/98 (54%), Positives = 72/98 (73%)
 Frame = +3

Query: 483 PKELSGSFDLIPQLGLQIYHDAYSKQTLAASIAQTHYLQNIVGDTELRKGEGMELMQCIH 662
           P+EL+G+ DLI Q  L+ +HD + K+ L  +I+ THYL N+VGDTE+RKGEGMEL Q + 
Sbjct: 12  PRELTGAVDLISQYKLEPHHDFFCKRPLPLAISDTHYLHNVVGDTEIRKGEGMELDQLVQ 71

Query: 663 NLRMRDRISQIKPFDLEVLRQAFELRESGPIKLSEADK 776
           N  +RD+   IKPFD+E L QAF+LRE+ P+ L  A+K
Sbjct: 72  NAYLRDKPPHIKPFDMETLGQAFQLRETAPVDLPSAEK 109


>XP_012700203.1 PREDICTED: mediator of RNA polymerase II transcription subunit
           19a-like [Setaria italica]
          Length = 220

 Score =  110 bits (275), Expect = 6e-26
 Identities = 52/98 (53%), Positives = 72/98 (73%)
 Frame = +3

Query: 483 PKELSGSFDLIPQLGLQIYHDAYSKQTLAASIAQTHYLQNIVGDTELRKGEGMELMQCIH 662
           P+EL+G+ DLI    L  +HD + K+ L  +I+ THYL N+VGDTE+RKGEGMEL Q + 
Sbjct: 12  PRELTGAVDLINHYKLLPHHDFFCKKPLPPAISDTHYLHNVVGDTEIRKGEGMELDQLVQ 71

Query: 663 NLRMRDRISQIKPFDLEVLRQAFELRESGPIKLSEADK 776
           N  MRD+ + I+PFD+E+L QAF+LRE+ P+ L  A+K
Sbjct: 72  NAYMRDKPAFIQPFDMEILGQAFQLRETAPVDLPSAEK 109


>XP_015618164.1 PREDICTED: mediator of RNA polymerase II transcription subunit 19a
           isoform X2 [Oryza sativa Japonica Group] ABG22086.1
           expressed protein [Oryza sativa Japonica Group]
          Length = 211

 Score =  110 bits (274), Expect = 7e-26
 Identities = 51/98 (52%), Positives = 71/98 (72%)
 Frame = +3

Query: 483 PKELSGSFDLIPQLGLQIYHDAYSKQTLAASIAQTHYLQNIVGDTELRKGEGMELMQCIH 662
           P+EL+G+ DLI    L  +HD + K+ L  +I+ THYL N+VGDTE+RKGEGMEL Q + 
Sbjct: 12  PRELTGAVDLISHYKLLAHHDFFCKKPLPLAISDTHYLDNVVGDTEIRKGEGMELDQLVQ 71

Query: 663 NLRMRDRISQIKPFDLEVLRQAFELRESGPIKLSEADK 776
           N  +RD+ + I+PFD+E L QAF+LRE+ P+ L  A+K
Sbjct: 72  NAYLRDKPAYIQPFDMETLGQAFQLRETAPVDLPSAEK 109


>XP_006664203.1 PREDICTED: mediator of RNA polymerase II transcription subunit 19a
           isoform X3 [Oryza brachyantha] XP_015698829.1 PREDICTED:
           mediator of RNA polymerase II transcription subunit 19a
           isoform X3 [Oryza brachyantha]
          Length = 214

 Score =  110 bits (274), Expect = 7e-26
 Identities = 51/98 (52%), Positives = 71/98 (72%)
 Frame = +3

Query: 483 PKELSGSFDLIPQLGLQIYHDAYSKQTLAASIAQTHYLQNIVGDTELRKGEGMELMQCIH 662
           P+EL+G+ DLI    L  +HD + K+ L  +I+ THYL N+VGDTE+RKGEGMEL Q + 
Sbjct: 12  PRELTGAVDLISHYKLLAHHDFFCKRPLPLAISDTHYLHNVVGDTEIRKGEGMELDQLVQ 71

Query: 663 NLRMRDRISQIKPFDLEVLRQAFELRESGPIKLSEADK 776
           N  +RD+ + I+PFD+E L QAF+LRE+ P+ L  A+K
Sbjct: 72  NAYLRDKPAYIQPFDMETLGQAFQLRETAPVDLPSAEK 109


>EEC69671.1 hypothetical protein OsI_39104 [Oryza sativa Indica Group]
          Length = 220

 Score =  110 bits (274), Expect = 9e-26
 Identities = 51/98 (52%), Positives = 71/98 (72%)
 Frame = +3

Query: 483 PKELSGSFDLIPQLGLQIYHDAYSKQTLAASIAQTHYLQNIVGDTELRKGEGMELMQCIH 662
           P+EL+G+ DLI    L  +HD + K+ L  +I+ THYL N+VGDTE+RKGEGMEL Q + 
Sbjct: 12  PRELTGAVDLISHYKLLAHHDFFCKKPLPLAISDTHYLHNVVGDTEIRKGEGMELDQLVQ 71

Query: 663 NLRMRDRISQIKPFDLEVLRQAFELRESGPIKLSEADK 776
           N  +RD+ + I+PFD+E L QAF+LRE+ P+ L  A+K
Sbjct: 72  NAYLRDKPAYIQPFDMETLGQAFQLRETAPVDLPSAEK 109


>XP_015618161.1 PREDICTED: mediator of RNA polymerase II transcription subunit 19a
           isoform X1 [Oryza sativa Japonica Group] XP_015618162.1
           PREDICTED: mediator of RNA polymerase II transcription
           subunit 19a isoform X1 [Oryza sativa Japonica Group]
           XP_015618163.1 PREDICTED: mediator of RNA polymerase II
           transcription subunit 19a isoform X1 [Oryza sativa
           Japonica Group] ABG22085.1 expressed protein [Oryza
           sativa Japonica Group] BAG91077.1 unnamed protein
           product [Oryza sativa Japonica Group] EEE53605.1
           hypothetical protein OsJ_36861 [Oryza sativa Japonica
           Group] BAT18071.1 Os12g0614000 [Oryza sativa Japonica
           Group]
          Length = 220

 Score =  110 bits (274), Expect = 9e-26
 Identities = 51/98 (52%), Positives = 71/98 (72%)
 Frame = +3

Query: 483 PKELSGSFDLIPQLGLQIYHDAYSKQTLAASIAQTHYLQNIVGDTELRKGEGMELMQCIH 662
           P+EL+G+ DLI    L  +HD + K+ L  +I+ THYL N+VGDTE+RKGEGMEL Q + 
Sbjct: 12  PRELTGAVDLISHYKLLAHHDFFCKKPLPLAISDTHYLDNVVGDTEIRKGEGMELDQLVQ 71

Query: 663 NLRMRDRISQIKPFDLEVLRQAFELRESGPIKLSEADK 776
           N  +RD+ + I+PFD+E L QAF+LRE+ P+ L  A+K
Sbjct: 72  NAYLRDKPAYIQPFDMETLGQAFQLRETAPVDLPSAEK 109


>BAF30286.1 Os12g0614000, partial [Oryza sativa Japonica Group]
          Length = 231

 Score =  110 bits (274), Expect = 1e-25
 Identities = 51/98 (52%), Positives = 71/98 (72%)
 Frame = +3

Query: 483 PKELSGSFDLIPQLGLQIYHDAYSKQTLAASIAQTHYLQNIVGDTELRKGEGMELMQCIH 662
           P+EL+G+ DLI    L  +HD + K+ L  +I+ THYL N+VGDTE+RKGEGMEL Q + 
Sbjct: 23  PRELTGAVDLISHYKLLAHHDFFCKKPLPLAISDTHYLDNVVGDTEIRKGEGMELDQLVQ 82

Query: 663 NLRMRDRISQIKPFDLEVLRQAFELRESGPIKLSEADK 776
           N  +RD+ + I+PFD+E L QAF+LRE+ P+ L  A+K
Sbjct: 83  NAYLRDKPAYIQPFDMETLGQAFQLRETAPVDLPSAEK 120


>XP_015698828.1 PREDICTED: mediator of RNA polymerase II transcription subunit 19a
           isoform X2 [Oryza brachyantha]
          Length = 256

 Score =  110 bits (274), Expect = 2e-25
 Identities = 51/98 (52%), Positives = 71/98 (72%)
 Frame = +3

Query: 483 PKELSGSFDLIPQLGLQIYHDAYSKQTLAASIAQTHYLQNIVGDTELRKGEGMELMQCIH 662
           P+EL+G+ DLI    L  +HD + K+ L  +I+ THYL N+VGDTE+RKGEGMEL Q + 
Sbjct: 12  PRELTGAVDLISHYKLLAHHDFFCKRPLPLAISDTHYLHNVVGDTEIRKGEGMELDQLVQ 71

Query: 663 NLRMRDRISQIKPFDLEVLRQAFELRESGPIKLSEADK 776
           N  +RD+ + I+PFD+E L QAF+LRE+ P+ L  A+K
Sbjct: 72  NAYLRDKPAYIQPFDMETLGQAFQLRETAPVDLPSAEK 109


>KXG23999.1 hypothetical protein SORBI_008G170000 [Sorghum bicolor]
          Length = 217

 Score =  108 bits (271), Expect = 2e-25
 Identities = 51/98 (52%), Positives = 70/98 (71%)
 Frame = +3

Query: 483 PKELSGSFDLIPQLGLQIYHDAYSKQTLAASIAQTHYLQNIVGDTELRKGEGMELMQCIH 662
           P+EL+G+ DLI    L  +HD + K+ L  +I+ THYL N+VGDTE+RKGEGMEL Q + 
Sbjct: 12  PRELTGAVDLISHYKLLPHHDFFCKKPLPLAISDTHYLHNVVGDTEIRKGEGMELDQLVQ 71

Query: 663 NLRMRDRISQIKPFDLEVLRQAFELRESGPIKLSEADK 776
           N  MRD+ + I+PFD+E L QAF+LRE+ P+ L   +K
Sbjct: 72  NAYMRDKPAYIQPFDMETLGQAFQLRETAPVDLPSTEK 109


>XP_006664202.1 PREDICTED: mediator of RNA polymerase II transcription subunit 19a
           isoform X1 [Oryza brachyantha]
          Length = 264

 Score =  110 bits (274), Expect = 2e-25
 Identities = 51/98 (52%), Positives = 71/98 (72%)
 Frame = +3

Query: 483 PKELSGSFDLIPQLGLQIYHDAYSKQTLAASIAQTHYLQNIVGDTELRKGEGMELMQCIH 662
           P+EL+G+ DLI    L  +HD + K+ L  +I+ THYL N+VGDTE+RKGEGMEL Q + 
Sbjct: 12  PRELTGAVDLISHYKLLAHHDFFCKRPLPLAISDTHYLHNVVGDTEIRKGEGMELDQLVQ 71

Query: 663 NLRMRDRISQIKPFDLEVLRQAFELRESGPIKLSEADK 776
           N  +RD+ + I+PFD+E L QAF+LRE+ P+ L  A+K
Sbjct: 72  NAYLRDKPAYIQPFDMETLGQAFQLRETAPVDLPSAEK 109


>JAT56232.1 TRAF3-interacting protein 1 [Anthurium amnicola]
          Length = 215

 Score =  108 bits (270), Expect = 3e-25
 Identities = 51/99 (51%), Positives = 74/99 (74%), Gaps = 1/99 (1%)
 Frame = +3

Query: 483 PKELSGSFDLIPQLGLQIYHDAYSKQTLAASIAQTHYLQNIVGDTELRKGEGMELMQCI- 659
           P+EL+G+ DLI    L ++HD + K+ L  SI++THYL N+VG+TE+RKGEGMEL Q   
Sbjct: 12  PRELAGAVDLINHYKLLVHHDLFCKRALPMSISETHYLHNVVGETEIRKGEGMELDQLFE 71

Query: 660 HNLRMRDRISQIKPFDLEVLRQAFELRESGPIKLSEADK 776
           +N  +R+  + I+PFDL+ LRQAF+LRE+ P++L  A+K
Sbjct: 72  NNSYLRETTANIRPFDLDTLRQAFQLRETAPVELPSAEK 110


>XP_008672425.1 PREDICTED: uncharacterized protein LOC100273335 isoform X1 [Zea
           mays]
          Length = 217

 Score =  108 bits (270), Expect = 3e-25
 Identities = 52/98 (53%), Positives = 70/98 (71%)
 Frame = +3

Query: 483 PKELSGSFDLIPQLGLQIYHDAYSKQTLAASIAQTHYLQNIVGDTELRKGEGMELMQCIH 662
           P+EL+G+ DLI    L  +HD + K+ L  +I+ THYL NIVGDTE+RKGEGMEL Q + 
Sbjct: 12  PRELTGAVDLINHYKLLPHHDFFCKKPLPLAISDTHYLHNIVGDTEIRKGEGMELDQLVQ 71

Query: 663 NLRMRDRISQIKPFDLEVLRQAFELRESGPIKLSEADK 776
           N  MRD+ + I+PFD+E L QAF+LRE+ P+ L   +K
Sbjct: 72  NAYMRDKPAYIQPFDMETLGQAFQLRETAPVVLPSTEK 109


>NP_001141248.1 uncharacterized protein LOC100273335 [Zea mays] ACF85845.1 unknown
           [Zea mays] ACG33819.1 hypothetical protein [Zea mays]
          Length = 218

 Score =  108 bits (270), Expect = 3e-25
 Identities = 52/98 (53%), Positives = 70/98 (71%)
 Frame = +3

Query: 483 PKELSGSFDLIPQLGLQIYHDAYSKQTLAASIAQTHYLQNIVGDTELRKGEGMELMQCIH 662
           P+EL+G+ DLI    L  +HD + K+ L  +I+ THYL NIVGDTE+RKGEGMEL Q + 
Sbjct: 12  PRELTGAVDLINHYKLLPHHDFFCKKPLPLAISDTHYLHNIVGDTEIRKGEGMELDQLVQ 71

Query: 663 NLRMRDRISQIKPFDLEVLRQAFELRESGPIKLSEADK 776
           N  MRD+ + I+PFD+E L QAF+LRE+ P+ L   +K
Sbjct: 72  NAYMRDKPAYIQPFDMETLGQAFQLRETAPVVLPSTEK 109