BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00013878
         (238 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CEJ83743.1 conserved hypothetical protein [Hyphomicrobium sp. GJ21]    52   3e-13
EFL09830.1 conserved hypothetical protein [Streptomyces sp. AA4]       65   1e-11
EFE20963.1 hypothetical protein EDWATA_04070 [Edwardsiella tarda...    62   3e-11
AAN44146.1 hypothetical protein SF2650 [Shigella flexneri 2a str...    62   1e-10
EEW89193.1 conserved hypothetical protein [Brucella suis bv. 4 s...    53   2e-10
OGL34225.1 hypothetical protein A3F64_00725 [Candidatus Sacchari...    59   8e-10
CDZ90521.1 conserved hypothetical protein [Rhodococcus ruber] CD...    55   8e-10
EKD63476.1 hypothetical protein ACD_51C00272G0007, partial [uncu...    55   3e-08
KJB49896.1 hypothetical protein B456_008G144300 [Gossypium raimo...    56   4e-08
EHG27035.1 hypothetical protein HMPREF9467_04727, partial [, par...    54   6e-08
EHM94433.1 hypothetical protein HMPREF0975_01540 [Actinomyces sp...    57   8e-08
CRH36729.1 hypothetical protein BN1184_AH_02440 [Pantoea ananatis]     54   2e-07
CCG06579.1 Putative uncharacterized protein, partial [Pararhodos...    52   1e-06
CCH85655.1 protein of unknown function [Modestobacter marinus]         49   9e-06

>CEJ83743.1 conserved hypothetical protein [Hyphomicrobium sp. GJ21]
          Length = 117

 Score = 52.0 bits (123), Expect(3) = 3e-13
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +2

Query: 68  FPQKGVSGISASFPALFRTKGYVPTCYSPVC 160
           FP  GV GI+ SFP LFRT G VPTCYSPVC
Sbjct: 35  FPLSGVYGITPSFPGLFRTIGKVPTCYSPVC 65



 Score = 36.2 bits (82), Expect(3) = 3e-13
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +3

Query: 186 DLHVLSLPPAFVLSQDQ 236
           DLHVL LPPAFVLSQDQ
Sbjct: 73  DLHVLGLPPAFVLSQDQ 89



 Score = 33.5 bits (75), Expect(3) = 3e-13
 Identities = 15/20 (75%), Positives = 15/20 (75%)
 Frame = +1

Query: 1  RLGRPLPHQQANQTRADPSA 60
          RLG PLPHQ AN TRA P A
Sbjct: 13 RLGEPLPHQLANPTRAHPIA 32


>EFL09830.1 conserved hypothetical protein [Streptomyces sp. AA4]
          Length = 121

 Score = 64.7 bits (156), Expect = 1e-11
 Identities = 43/86 (50%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
 Frame = +2

Query: 5   LVGRYPTNKLIRRGPILRQ*TFPQKG-----VSGISASFPALFRTKG---YVPTCYSPVC 160
           +VG YPTNKLI RG I  +  FP        VSGI  SFP L ++ G   +V    SP+ 
Sbjct: 1   MVGHYPTNKLIGRGFIPYRRNFPPPQMPAVVVSGIRPSFPGLSQSTGQITHVLLTRSPLI 60

Query: 161 R*HIAMPARLACVKPAASVRPEPGSN 238
                   RLACVK AASVRPEPGSN
Sbjct: 61  PGRNRFSVRLACVKHAASVRPEPGSN 86


>EFE20963.1 hypothetical protein EDWATA_04070 [Edwardsiella tarda ATCC 23685]
          Length = 66

 Score = 62.4 bits (150), Expect = 3e-11
 Identities = 35/59 (59%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
 Frame = +3

Query: 78  RAYPVLALVSQRYSEPKGTFPRVTHPSAAD------ILLCPLDLHVLSLPPAFVLSQDQ 236
           R Y VLA VS  Y  P G  P +THPSAA         L PLDLHVLSLPPAF LS DQ
Sbjct: 2   RRYAVLATVSSSYPPPSGRSPDITHPSAARQRRKQAFSLLPLDLHVLSLPPAFNLSHDQ 60


>AAN44146.1 hypothetical protein SF2650 [Shigella flexneri 2a str. 301]
          Length = 134

 Score = 62.4 bits (150), Expect = 1e-10
 Identities = 33/58 (56%), Positives = 36/58 (62%), Gaps = 5/58 (8%)
 Frame = +3

Query: 78  RAYPVLALVSQRYSEPKGTFPRVTHPSA-----ADILLCPLDLHVLSLPPAFVLSQDQ 236
           R Y VLA VS  Y  P G+FP +THPSA     +   L P DLHVL LPPAF LS DQ
Sbjct: 44  RRYAVLATVSSSYPPPSGSFPDITHPSATRQRSSKRFLLPFDLHVLGLPPAFNLSHDQ 101


>EEW89193.1 conserved hypothetical protein [Brucella suis bv. 4 str. 40]
          Length = 62

 Score = 53.1 bits (126), Expect(2) = 2e-10
 Identities = 24/32 (75%), Positives = 25/32 (78%)
 Frame = +2

Query: 68  FPQKGVSGISASFPALFRTKGYVPTCYSPVCR 163
           FP KG  GIS SFP LFR+K YVPT YSPVCR
Sbjct: 2   FPPKGTYGISTSFPELFRSKWYVPTRYSPVCR 33



 Score = 39.3 bits (90), Expect(2) = 2e-10
 Identities = 18/18 (100%), Positives = 18/18 (100%)
 Frame = +3

Query: 183 LDLHVLSLPPAFVLSQDQ 236
           LDLHVLSLPPAFVLSQDQ
Sbjct: 39  LDLHVLSLPPAFVLSQDQ 56


>OGL34225.1 hypothetical protein A3F64_00725 [Candidatus Saccharibacteria
           bacterium RIFCSPHIGHO2_12_FULL_42_8]
          Length = 62

 Score = 58.5 bits (140), Expect = 8e-10
 Identities = 32/56 (57%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
 Frame = +3

Query: 75  KRAYPVLALVSQRYSEPKGTFPRVTHPSAADI--LLCPLDLHVLSLPPAFVLSQDQ 236
           +R Y VL  VS  Y    G FPRVT P AA +     PLDLHVL  PPAF+LSQDQ
Sbjct: 2   RRPYAVLDTVSDAYPSLWGEFPRVTQPFAARVPRRALPLDLHVLGTPPAFILSQDQ 57


>CDZ90521.1 conserved hypothetical protein [Rhodococcus ruber] CDZ90311.1
           conserved hypothetical protein [Rhodococcus ruber]
          Length = 161

 Score = 54.7 bits (130), Expect(2) = 8e-10
 Identities = 29/50 (58%), Positives = 34/50 (68%), Gaps = 5/50 (10%)
 Frame = +2

Query: 2   ALVGRYPTNKLIRRGPILRQ*TFPQKG-----VSGISASFPALFRTKGYV 136
           ALVGRYPTNKLI RGPIL + TFP +      +SGI  SFP L R+ G +
Sbjct: 72  ALVGRYPTNKLIGRGPILHRKTFPPRNMHPEVLSGIRPSFPGLSRSAGQI 121



 Score = 35.8 bits (81), Expect(2) = 8e-10
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +3

Query: 186 DLHVLSLPPAFVLSQDQ 236
           DLHVLS PPAFVLSQDQ
Sbjct: 142 DLHVLSTPPAFVLSQDQ 158


>EKD63476.1 hypothetical protein ACD_51C00272G0007, partial [uncultured
           bacterium]
          Length = 70

 Score = 54.7 bits (130), Expect = 3e-08
 Identities = 30/53 (56%), Positives = 36/53 (67%)
 Frame = -2

Query: 237 FDPGSGRTLAAGLTHASRAGIAICQRQTGE*HVGTYPLVRNNAGKLALIPDTP 79
           FD GSG TLAA + HASR  +AI Q QTGE  VGT   +R+++ K  LIPD P
Sbjct: 9   FDHGSGLTLAACIIHASRTVVAILQWQTGEERVGTCLALRDSSSKDELIPDGP 61


>KJB49896.1 hypothetical protein B456_008G144300 [Gossypium raimondii]
          Length = 123

 Score = 55.8 bits (133), Expect = 4e-08
 Identities = 31/56 (55%), Positives = 35/56 (62%)
 Frame = +3

Query: 69  FPKRAYPVLALVSQRYSEPKGTFPRVTHPSAADILLCPLDLHVLSLPPAFVLSQDQ 236
           F   AY VLA+VS   S PKG F RVTHPS         DLH+LS+ P F+LSQDQ
Sbjct: 11  FCSSAYEVLAVVSNYCSTPKGRFLRVTHPS---------DLHMLSMSPTFILSQDQ 57


>EHG27035.1 hypothetical protein HMPREF9467_04727, partial [, partial
           [[Clostridium] clostridioforme 2_1_49FAA]
          Length = 71

 Score = 53.9 bits (128), Expect = 6e-08
 Identities = 29/61 (47%), Positives = 36/61 (59%), Gaps = 9/61 (14%)
 Frame = +3

Query: 81  AYPVLALVSQRYSEPKGTFPRVTHPSAAD---------ILLCPLDLHVLSLPPAFVLSQD 233
           AY VLA++     + +  +PRVTHPSA           IL+   DLHVL  PPAF+LSQD
Sbjct: 5   AYAVLAVILTVIPQCEAGYPRVTHPSATQSIKIPSENFILIASFDLHVLGTPPAFILSQD 64

Query: 234 Q 236
           Q
Sbjct: 65  Q 65


>EHM94433.1 hypothetical protein HMPREF0975_01540 [Actinomyces sp. oral taxon
           849 str. F0330]
          Length = 255

 Score = 57.0 bits (136), Expect = 8e-08
 Identities = 43/95 (45%), Positives = 52/95 (54%), Gaps = 16/95 (16%)
 Frame = +2

Query: 2   ALVGRYPTNKLIRRGPILRQ*-----TFP-----QKGVSGISASFPALFRTKG---YVPT 142
           ALVG +PTNKLI R PI  +      +FP     + G+  IS +F  L R +G   +V  
Sbjct: 14  ALVGHHPTNKLIGREPIPHRKHPKAQSFPNPPCDRPGIPRISPTFMRLSRRRGQVTHVLL 73

Query: 143 CYSPVCR*HIA---MPARLACVKPAASVRPEPGSN 238
             SP+   H        RLACVK AASVRPEPGSN
Sbjct: 74  TRSPLIHTHQKGKRFTVRLACVKHAASVRPEPGSN 108


>CRH36729.1 hypothetical protein BN1184_AH_02440 [Pantoea ananatis]
          Length = 115

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 30/58 (51%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
 Frame = +3

Query: 78  RAYPVLALVSQRYSEPKGTFPRVTHPSA-----ADILLCPLDLHVLSLPPAFVLSQDQ 236
           R Y VLA VS  Y    G  P +THPSA     + + + P DLHVL LPPAF LS DQ
Sbjct: 2   RRYAVLATVSSGYPPLSGRSPDITHPSATRHPRSKLSVLPSDLHVLGLPPAFNLSHDQ 59


>CCG06579.1 Putative uncharacterized protein, partial [Pararhodospirillum
           photometricum DSM 122] CCG06599.1 unnamed protein
           product, partial [Pararhodospirillum photometricum DSM
           122]
          Length = 106

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 31/69 (44%), Positives = 39/69 (56%)
 Frame = +2

Query: 32  LIRRGPILRQ*TFPQKGVSGISASFPALFRTKGYVPTCYSPVCR*HIAMPARLACVKPAA 211
           LI RGPIL + +FP++  + +          +G  P    P C  H     RLACV+PAA
Sbjct: 1   LIGRGPILERNSFPRRAYTVLVLVSKDYSVLQGTFPRVTHP-CATHPEGCVRLACVRPAA 59

Query: 212 SVRPEPGSN 238
           SVRPEPGSN
Sbjct: 60  SVRPEPGSN 68


>CCH85655.1 protein of unknown function [Modestobacter marinus]
          Length = 105

 Score = 49.3 bits (116), Expect = 9e-06
 Identities = 35/81 (43%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
 Frame = -2

Query: 237 FDPGSGRTLAAGLTHASRAGIAICQRQTGE*HVGTY---PLVRNNAGKLALIPDTP---- 79
           FDPGSGRTLAA LTHASRA  +     +GE    T+   P + +N+ KL LIPD      
Sbjct: 16  FDPGSGRTLAACLTHASRARPSFGGCPSGERVSNTWATCPQLWDNSKKLVLIPDVTADRM 75

Query: 78  -FWGKVYCRRIGPRLISLLVG 19
            +W K      GP    L+ G
Sbjct: 76  VWWWKDSSAEDGPAAYQLVGG 96