BLASTX nr result
ID: Ephedra29_contig00013864
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00013864
(1900 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010110299.1 DNA repair protein XRCC1 [Morus notabilis] EXC258... 271 1e-81
OMO54184.1 hypothetical protein CCACVL1_27989 [Corchorus capsula... 270 2e-81
XP_017978017.1 PREDICTED: DNA-repair protein XRCC1 [Theobroma ca... 270 3e-81
EOY26664.1 BRCT domain-containing DNA repair protein, putative i... 268 1e-80
EOY26663.1 BRCT domain-containing DNA repair protein, putative i... 266 6e-80
OMO66822.1 hypothetical protein COLO4_30328 [Corchorus olitorius] 264 5e-79
XP_017623144.1 PREDICTED: DNA-repair protein XRCC1 isoform X2 [G... 261 7e-78
XP_016742570.1 PREDICTED: DNA-repair protein XRCC1-like isoform ... 260 1e-77
XP_006465445.2 PREDICTED: DNA-repair protein XRCC1 [Citrus sinen... 260 2e-77
XP_009802986.1 PREDICTED: DNA repair protein XRCC1 [Nicotiana sy... 259 3e-77
ONK66566.1 uncharacterized protein A4U43_C06F9580 [Asparagus off... 262 3e-77
XP_012456670.1 PREDICTED: DNA-repair protein XRCC1 isoform X2 [G... 259 4e-77
XP_017623140.1 PREDICTED: DNA-repair protein XRCC1 isoform X1 [G... 259 5e-77
XP_016739767.1 PREDICTED: DNA-repair protein XRCC1-like isoform ... 258 6e-77
XP_016742559.1 PREDICTED: DNA-repair protein XRCC1-like isoform ... 258 6e-77
XP_009623792.1 PREDICTED: DNA-repair protein XRCC1 [Nicotiana to... 258 1e-76
XP_016459484.1 PREDICTED: DNA-repair protein XRCC1 [Nicotiana ta... 257 2e-76
XP_012456602.1 PREDICTED: DNA-repair protein XRCC1 isoform X1 [G... 257 3e-76
XP_016739765.1 PREDICTED: DNA-repair protein XRCC1-like isoform ... 256 4e-76
XP_010062442.1 PREDICTED: DNA-repair protein XRCC1 [Eucalyptus g... 258 4e-76
>XP_010110299.1 DNA repair protein XRCC1 [Morus notabilis] EXC25819.1 DNA repair
protein XRCC1 [Morus notabilis]
Length = 372
Score = 271 bits (692), Expect = 1e-81
Identities = 144/360 (40%), Positives = 219/360 (60%), Gaps = 3/360 (0%)
Frame = -1
Query: 1099 DEKKSISTQVKGRKDDQSNNGVSKDKINNSKPSHGQSGTSSHRGNAGMGISKRNDKDSSS 920
++ +S + G ++ +N K+K K H ++ + G G+ SK+ +
Sbjct: 18 NKAESSGNKPSGFRESDGSNESEKEKPKQDKGHHSRTNS----GAVGIETSKK-----TV 68
Query: 919 SFSMLMDGVVFAISGLVNPERGKIRSQALAMGAEYQADWNPGCTLLVCAFPNTPKFKQVK 740
FS L++GVVF +SG +NPER +RSQALAMGAEYQADWN GCTLLVCAFPNTPKF+QV+
Sbjct: 69 DFSKLLEGVVFVLSGFINPERSTLRSQALAMGAEYQADWNSGCTLLVCAFPNTPKFRQVE 128
Query: 739 GDGGTIVSKEWITECFNKKRLVEIDPYLMHSGKPWRKRQPSTSDLLNDNSSGQSTESLIK 560
D GTIVSKEWI+EC+++K+LV+I+ YLMH+GKPWR+ S++ +D S+ ++L
Sbjct: 129 ADCGTIVSKEWISECYSQKKLVDIESYLMHAGKPWRR-----SNVSHDTST--EPKALPP 181
Query: 559 SDNKKKTLSNKKQMNSRVGDKQWDTKLE---YNDDEVQSWVAEDFNATISWLQKQDEKPP 389
++K+ + + + K D ++ +V+ W +D N TISWL+ Q+EKP
Sbjct: 182 KRSQKEGAGSHSKPTASAVPKNKDPDPANGCFSPSKVKKWAIDDLNNTISWLESQEEKPE 241
Query: 388 IGELEETSFQGIIACLEDAMTCLKENKRIHSLFDVWEFVPRVVKELAAYEDCQKTSNNIS 209
E+++ + +GI+ CL+DA+ L++ + +H + + W+FVPRVVKELA E + +IS
Sbjct: 242 PNEIKKIAAEGILTCLQDAIDSLEQKQDVHKIIEQWKFVPRVVKELAKLEGKVENGASIS 301
Query: 208 NEELLKLAFTFKALYESEFKKIRRSSLEVNEKGKCVSKRXXXXXXXXDTIVMDEDEIDRA 29
E+L + A K +YE+EF +S +K K + +TI M E+EID A
Sbjct: 302 QEDLYREAMECKRVYETEFDSSEDNSFPKKKKSKIAEPKRATGYDSDETIEMTEEEIDLA 361
>OMO54184.1 hypothetical protein CCACVL1_27989 [Corchorus capsularis]
Length = 359
Score = 270 bits (690), Expect = 2e-81
Identities = 152/362 (41%), Positives = 218/362 (60%), Gaps = 18/362 (4%)
Frame = -1
Query: 1060 KDDQSNNGVSKDKINNSKPSHGQSGTSSHRGNAGMGISKRNDKD-----SSSSFSMLMDG 896
K QS G ++ N + PS S + + + +K ND + SS++FS LM+G
Sbjct: 5 KTSQSGGGKTQ---NRNLPSWMSSRENESKSDG----NKSNDANGHGSSSSNNFSKLMEG 57
Query: 895 VVFAISGLVNPERGKIRSQALAMGAEYQADWNPGCTLLVCAFPNTPKFKQVKGDGGTIVS 716
VVF +SG VNPER +RSQ LAMGAEYQ DWN CTLLVCAF NTPKF+QV+ D GTIVS
Sbjct: 58 VVFVLSGFVNPERSTLRSQGLAMGAEYQPDWNSNCTLLVCAFHNTPKFRQVEADCGTIVS 117
Query: 715 KEWITECFNKKRLVEIDPYLMHSGKPWRKRQPSTSDLLNDNSSGQSTESLIKSDNKKKTL 536
KEWI + +K+LV+IDPYLMH+GKPWR+ S + + S Q + S S ++T
Sbjct: 118 KEWILDSHAQKKLVDIDPYLMHAGKPWRR-----SSISQETSKEQGSSSTKSSKQVEETQ 172
Query: 535 SNKKQMNSRVGDKQWDTKLEYNDDEVQSWVAEDFNATISWLQKQDEKPPIGELEETSFQG 356
S K + S+ +K + ++ +V+ WV +DFN TISWL+ Q+EKP E+++ + QG
Sbjct: 173 SKKPSVASK--NKASKAEESFSPSDVKKWVIDDFNGTISWLESQEEKPESHEIKQIAGQG 230
Query: 355 IIACLEDAMTCLKENKRIHSLFDVWEFVPRVVKELAAYEDCQKTSNNISNEELLKLAFTF 176
I+ CL+DA+ CL++N+ + + + W FVPRVVKELA +E + S++++NE+LL+ A
Sbjct: 231 ILTCLQDAIDCLEQNQDVRKIIEQWSFVPRVVKELANFEG--RESSSLTNEDLLRKAKVC 288
Query: 175 KALYESEFKKIRRSSLEVNEKGKC-------------VSKRXXXXXXXXDTIVMDEDEID 35
K +YE E ++ S N+K K S + +TI M E+EI+
Sbjct: 289 KQIYEDELTRLNGDSPSKNKKLKTDGGKESNDKRKTKASSKDKAGYDSDETIEMTEEEIE 348
Query: 34 RA 29
A
Sbjct: 349 LA 350
>XP_017978017.1 PREDICTED: DNA-repair protein XRCC1 [Theobroma cacao] XP_007024042.2
PREDICTED: DNA-repair protein XRCC1 [Theobroma cacao]
Length = 360
Score = 270 bits (689), Expect = 3e-81
Identities = 152/355 (42%), Positives = 215/355 (60%), Gaps = 16/355 (4%)
Frame = -1
Query: 1045 NNGVSKDKINN--SKPSHGQSGTSSHRGNAGMGISKRNDKDSSSSFSMLMDGVVFAISGL 872
+ GV K + N S S ++ + S++ N G G + ++++FS LM+GVVF +SG
Sbjct: 9 SGGVGKTQTRNLPSWMSSRENESKSNKSNDGNG---HGEGSNNTNFSKLMEGVVFVLSGF 65
Query: 871 VNPERGKIRSQALAMGAEYQADWNPGCTLLVCAFPNTPKFKQVKGDGGTIVSKEWITECF 692
VNPER +RSQALAMGAEYQ DWN CTLLVCAF NTPKF+QV+ D GTIVSKEWI EC+
Sbjct: 66 VNPERSTLRSQALAMGAEYQPDWNSNCTLLVCAFQNTPKFRQVEADCGTIVSKEWILECY 125
Query: 691 NKKRLVEIDPYLMHSGKPWRKRQPS--TSDLLNDNSSGQSTESLIKSDNKKKTLSNKKQM 518
+K+LV+IDPYLMH+GKPWR+ S TS+ +SS +S + + KS +K+ + K +
Sbjct: 126 AQKKLVDIDPYLMHAGKPWRRSNISHETSEEQQGSSSTKSYKQVEKSQSKRTSSPYKNKA 185
Query: 517 NSRVGDKQWDTKLEYNDDEVQSWVAEDFNATISWLQKQDEKPPIGELEETSFQGIIACLE 338
+ K + EV+ WV +DF TISWL+ Q+EKP E+++ + GI+ CL+
Sbjct: 186 SH-------PAKESFPPPEVKKWVIDDFIGTISWLESQEEKPEPHEIKQIAGAGILTCLQ 238
Query: 337 DAMTCLKENKRIHSLFDVWEFVPRVVKELAAYEDCQKTSNNISNEELLKLAFTFKALYES 158
DA+ CL++ + + + + W FVPRVVKELA +E + S ++ E+LL+ A K +YE
Sbjct: 239 DAIDCLEQKQDVRQITEQWSFVPRVVKELAMFEGSEHGS--LTKEDLLRKAKVCKQIYED 296
Query: 157 EFKKIRRSSLEVNEK------------GKCVSKRXXXXXXXXDTIVMDEDEIDRA 29
E ++ S N+K G S R +TI M E+EID A
Sbjct: 297 ELTRLDGDSSSKNKKPKTDGGEEGKKGGTKASSRDATGYDSDETIEMTEEEIDLA 351
>EOY26664.1 BRCT domain-containing DNA repair protein, putative isoform 2
[Theobroma cacao]
Length = 360
Score = 268 bits (685), Expect = 1e-80
Identities = 152/355 (42%), Positives = 214/355 (60%), Gaps = 16/355 (4%)
Frame = -1
Query: 1045 NNGVSKDKINN--SKPSHGQSGTSSHRGNAGMGISKRNDKDSSSSFSMLMDGVVFAISGL 872
+ GV K + N S S ++ + S++ N G G + ++++FS LM+GVVF +SG
Sbjct: 9 SGGVGKTQTRNLPSWMSSRENESKSNKSNDGNG---HGEGSNNTNFSKLMEGVVFVLSGF 65
Query: 871 VNPERGKIRSQALAMGAEYQADWNPGCTLLVCAFPNTPKFKQVKGDGGTIVSKEWITECF 692
VNPER +RSQALAMGAEYQ DWN CTLLVCAF NTPKF+QV+ D GTIVSKEWI EC+
Sbjct: 66 VNPERSTLRSQALAMGAEYQPDWNSNCTLLVCAFQNTPKFRQVEADCGTIVSKEWILECY 125
Query: 691 NKKRLVEIDPYLMHSGKPWRKRQPS--TSDLLNDNSSGQSTESLIKSDNKKKTLSNKKQM 518
+K+LV+IDPYLMH+GKPWR+ S TS+ +SS +S + + KS +K+ + K +
Sbjct: 126 AQKKLVDIDPYLMHAGKPWRRSNISHETSEEQQGSSSTKSYKQVEKSQSKRTSSPYKNKA 185
Query: 517 NSRVGDKQWDTKLEYNDDEVQSWVAEDFNATISWLQKQDEKPPIGELEETSFQGIIACLE 338
+ K + EV+ WV DF TISWL+ Q+EKP E+++ + GI+ CL+
Sbjct: 186 SH-------PAKESFPPPEVKKWVIYDFIGTISWLESQEEKPEPHEIKQIAGAGILTCLQ 238
Query: 337 DAMTCLKENKRIHSLFDVWEFVPRVVKELAAYEDCQKTSNNISNEELLKLAFTFKALYES 158
DA+ CL++ + + + + W FVPRVVKELA +E + S ++ E+LL+ A K +YE
Sbjct: 239 DAIDCLEQKQDVRQITEQWSFVPRVVKELAMFEGSEHGS--LTKEDLLRKAKVCKQIYED 296
Query: 157 EFKKIRRSSLEVNEK------------GKCVSKRXXXXXXXXDTIVMDEDEIDRA 29
E ++ S N+K G S R +TI M E+EID A
Sbjct: 297 ELTRLDGDSSSKNKKPKTDGGEEGKKWGTKASSRDATGYDSDETIEMTEEEIDLA 351
>EOY26663.1 BRCT domain-containing DNA repair protein, putative isoform 1
[Theobroma cacao]
Length = 370
Score = 266 bits (681), Expect = 6e-80
Identities = 152/358 (42%), Positives = 214/358 (59%), Gaps = 19/358 (5%)
Frame = -1
Query: 1045 NNGVSKDKINN--SKPSHGQSGTSSHRGNAGMGISKRNDKDSSSSFSMLMDGVVFAISGL 872
+ GV K + N S S ++ + S++ N G G + ++++FS LM+GVVF +SG
Sbjct: 9 SGGVGKTQTRNLPSWMSSRENESKSNKSNDGNG---HGEGSNNTNFSKLMEGVVFVLSGF 65
Query: 871 VNPERGKIRSQALAMGAEYQADWNPGCTLLVCAFPNTPKFKQVKGDGGTIVSKEWITECF 692
VNPER +RSQALAMGAEYQ DWN CTLLVCAF NTPKF+QV+ D GTIVSKEWI EC+
Sbjct: 66 VNPERSTLRSQALAMGAEYQPDWNSNCTLLVCAFQNTPKFRQVEADCGTIVSKEWILECY 125
Query: 691 NKKRLVEIDPYLMHSGKPWRKRQPS--TSDLLNDNSSGQSTESLIKSDNKKKTLSNKKQM 518
+K+LV+IDPYLMH+GKPWR+ S TS+ +SS +S + + KS +K+ + K
Sbjct: 126 AQKKLVDIDPYLMHAGKPWRRSNISHETSEEQQGSSSTKSYKQVEKSQSKRTSSPYKVAF 185
Query: 517 NSRV---GDKQWDTKLEYNDDEVQSWVAEDFNATISWLQKQDEKPPIGELEETSFQGIIA 347
+ + K + EV+ WV DF TISWL+ Q+EKP E+++ + GI+
Sbjct: 186 DLVIYFQNKASHPAKESFPPPEVKKWVIYDFIGTISWLESQEEKPEPHEIKQIAGAGILT 245
Query: 346 CLEDAMTCLKENKRIHSLFDVWEFVPRVVKELAAYEDCQKTSNNISNEELLKLAFTFKAL 167
CL+DA+ CL++ + + + + W FVPRVVKELA +E + S ++ E+LL+ A K +
Sbjct: 246 CLQDAIDCLEQKQDVRQITEQWSFVPRVVKELAMFEGSEHGS--LTKEDLLRKAKVCKQI 303
Query: 166 YESEFKKIRRSSLEVNEK------------GKCVSKRXXXXXXXXDTIVMDEDEIDRA 29
YE E ++ S N+K G S R +TI M E+EID A
Sbjct: 304 YEDELTRLDGDSSSKNKKPKTDGGEEGKKWGTKASSRDATGYDSDETIEMTEEEIDLA 361
>OMO66822.1 hypothetical protein COLO4_30328 [Corchorus olitorius]
Length = 363
Score = 264 bits (674), Expect = 5e-79
Identities = 149/340 (43%), Positives = 209/340 (61%), Gaps = 19/340 (5%)
Frame = -1
Query: 991 SGTSSHRGNAGMGISKRNDKD-----SSSSFSMLMDGVVFAISGLVNPERGKIRSQALAM 827
S SS + + +K ND + SS++FS LMDGVVF +SG VNPER +RSQALAM
Sbjct: 24 SWMSSRENESELHGNKSNDANGHGSSSSNNFSKLMDGVVFVLSGFVNPERSTLRSQALAM 83
Query: 826 GAEYQADWNPGCTLLVCAFPNTPKFKQVKGDGGTIVSKEWITECFNKKRLVEIDPYLMHS 647
GAEYQ DWN CTLLVCAF NTPKF+QV+ D GTIVSKEWI + +K+LV+IDPYLMH+
Sbjct: 84 GAEYQPDWNSNCTLLVCAFHNTPKFRQVEADCGTIVSKEWILDSHAQKKLVDIDPYLMHA 143
Query: 646 GKPWRKRQPSTSDLLNDNSSGQSTESLIKSDNKKKTLSNKKQMNSRVGDKQWDTKLE-YN 470
GKPWR+ S + + S Q + S S ++T S K + S+ +K D E ++
Sbjct: 144 GKPWRR-----SSISQETSKEQGSSSTKSSKQVEETQSKKPSVASK--NKASDPAEESFS 196
Query: 469 DDEVQSWVAEDFNATISWLQKQDEKPPIGELEETSFQGIIACLEDAMTCLKENKRIHSLF 290
+V+ WV +DFN TISWL+ Q+EKP E+++ + QGI+ CL+DA+ L++N+ + +
Sbjct: 197 PSDVKKWVIDDFNGTISWLESQEEKPESHEIKQIAGQGILTCLQDAIDGLEQNQDVRKII 256
Query: 289 DVWEFVPRVVKELAAYEDCQKTSNNISNEELLKLAFTFKALYESEFKKIRRSSLEVNEKG 110
+ W FVPRVVKELA ++ + +S ++NE+LL+ A K +YE E ++ S N+K
Sbjct: 257 EQWSFVPRVVKELANFKGREHSS--LTNEDLLRKAKVCKQIYEDELTRLNGDSPSKNKKL 314
Query: 109 KC-------------VSKRXXXXXXXXDTIVMDEDEIDRA 29
K S + +TI M E+EI+ A
Sbjct: 315 KTDGGKEGNDKRKTKASSKDKAGYDSDETIEMTEEEIELA 354
>XP_017623144.1 PREDICTED: DNA-repair protein XRCC1 isoform X2 [Gossypium arboreum]
Length = 363
Score = 261 bits (666), Expect = 7e-78
Identities = 130/297 (43%), Positives = 185/297 (62%)
Frame = -1
Query: 1015 NSKPSHGQSGTSSHRGNAGMGISKRNDKDSSSSFSMLMDGVVFAISGLVNPERGKIRSQA 836
N SHG + + G S N ++FS L++GVVFA+SG VNPER +RSQA
Sbjct: 29 NESKSHGNKSNDAKGHDKGHASSSNN-----TNFSKLLEGVVFALSGFVNPERSTLRSQA 83
Query: 835 LAMGAEYQADWNPGCTLLVCAFPNTPKFKQVKGDGGTIVSKEWITECFNKKRLVEIDPYL 656
LAMGAEYQ DWN CTLL CAF NTPKF+QV+ D GTI+SKEWI EC+ +K+LV+IDPYL
Sbjct: 84 LAMGAEYQPDWNSNCTLLACAFQNTPKFRQVEADCGTIISKEWILECYAQKKLVDIDPYL 143
Query: 655 MHSGKPWRKRQPSTSDLLNDNSSGQSTESLIKSDNKKKTLSNKKQMNSRVGDKQWDTKLE 476
MH+GKPWR+ S + ++ S + SL KS K + +K +
Sbjct: 144 MHAGKPWRR-----SSISHETSQEKQGSSLTKSYKKVEETQSKTTSGPSKNKASQLAQDR 198
Query: 475 YNDDEVQSWVAEDFNATISWLQKQDEKPPIGELEETSFQGIIACLEDAMTCLKENKRIHS 296
++ +V+ WV +DFN TISWL+ Q+EKP E+++ + +GI+ CL+DA+ CL + + +
Sbjct: 199 FSPPKVKKWVMDDFNETISWLESQEEKPEPQEIKQVAGEGILTCLQDAIDCLAQKQDVQQ 258
Query: 295 LFDVWEFVPRVVKELAAYEDCQKTSNNISNEELLKLAFTFKALYESEFKKIRRSSLE 125
+ + W F+PRVVKELA ++ +++ E+LL+ A K +YE E +I SL+
Sbjct: 259 ITEQWSFIPRVVKELAIFD--ASNHGSLTKEDLLREAKVCKQIYEDELSRINSGSLK 313
>XP_016742570.1 PREDICTED: DNA-repair protein XRCC1-like isoform X2 [Gossypium
hirsutum]
Length = 363
Score = 260 bits (665), Expect = 1e-77
Identities = 131/297 (44%), Positives = 185/297 (62%)
Frame = -1
Query: 1015 NSKPSHGQSGTSSHRGNAGMGISKRNDKDSSSSFSMLMDGVVFAISGLVNPERGKIRSQA 836
N SHG + + G S N ++FS L++GVVFA+SG VNPER +RSQA
Sbjct: 29 NESKSHGNKSNDAKGHDKGHASSSNN-----TNFSKLLEGVVFALSGFVNPERSTLRSQA 83
Query: 835 LAMGAEYQADWNPGCTLLVCAFPNTPKFKQVKGDGGTIVSKEWITECFNKKRLVEIDPYL 656
LAMGAEYQ DWN CTLLVCAF NTPKF+QV+ D GTI+SKEWI EC+ +K+LV+IDPYL
Sbjct: 84 LAMGAEYQPDWNSNCTLLVCAFQNTPKFRQVEADCGTIISKEWILECYAQKKLVDIDPYL 143
Query: 655 MHSGKPWRKRQPSTSDLLNDNSSGQSTESLIKSDNKKKTLSNKKQMNSRVGDKQWDTKLE 476
MH+GKPWR+ S + ++ S + SL KS K + +K +
Sbjct: 144 MHAGKPWRR-----SSISHETSQEKQGSSLTKSYKKVEETQSKTTSGPSKNKASQLAQDR 198
Query: 475 YNDDEVQSWVAEDFNATISWLQKQDEKPPIGELEETSFQGIIACLEDAMTCLKENKRIHS 296
++ +V+ WV +DFN TISWL+ Q+EKP E+++ + +GI+ CL+DA+ CL + + +
Sbjct: 199 FSPPKVKKWVMDDFNETISWLESQEEKPEPQEIKQVAGEGILTCLQDAIDCLAQKQDVQQ 258
Query: 295 LFDVWEFVPRVVKELAAYEDCQKTSNNISNEELLKLAFTFKALYESEFKKIRRSSLE 125
+ + W F+PRVVKELA + +++ E+LL+ A K +YE E +I SL+
Sbjct: 259 ITEQWSFIPRVVKELAFLD--ASNHGSLTKEDLLREAKVCKQIYEDELSRINSGSLK 313
>XP_006465445.2 PREDICTED: DNA-repair protein XRCC1 [Citrus sinensis]
Length = 377
Score = 260 bits (664), Expect = 2e-77
Identities = 156/421 (37%), Positives = 224/421 (53%), Gaps = 5/421 (1%)
Frame = -1
Query: 1276 IKNTEHDSKNTEIEAKKRKLPGWKVPSETSKVSEEEHVNALDPNGTNAKKLLATAEDTGD 1097
+ ++ S N + +KR LP W SE S + D N N K D
Sbjct: 1 MSDSNTSSGNGNNKTQKRNLPSWMTSSENESNSHGKKPTDTDENEENQK----------D 50
Query: 1096 EKKSISTQVKGRKDDQSNNGVSKDKINNSKPSHGQSGTSSHRGNAGMGISKRNDKDSSSS 917
EK + Q KGR DK +N G S SS R N +
Sbjct: 51 EK---TKQAKGR-----------DKAHN-----GSSLASSSRAN---------------N 76
Query: 916 FSMLMDGVVFAISGLVNPERGKIRSQALAMGAEYQADWNPGCTLLVCAFPNTPKFKQVKG 737
FS L++GVVF +SG VNPER +RS+A+ MGA+YQADWN CTLLVCAFPNTPKF+QV+
Sbjct: 77 FSKLLEGVVFVLSGFVNPERSTLRSRAIEMGADYQADWNSNCTLLVCAFPNTPKFRQVEA 136
Query: 736 DGGTIVSKEWITECFNKKRLVEIDPYLMHSGKPWRKRQPSTSDLLNDNSSGQSTESLIKS 557
D GTIVSKEWI EC+N+K+LV+ID YLMH+GKPWRK ++ +S + +
Sbjct: 137 DCGTIVSKEWILECYNQKKLVDIDSYLMHAGKPWRK------SYISHKTSQEGSPPRKCP 190
Query: 556 DNKKKTLSNKKQMNSRVGDKQWDTKLEYNDDEVQSWVAEDFNATISWLQKQDEKPPIGEL 377
+K++ S S +K +++ E++ W A+D TISWL+ Q+EKP E+
Sbjct: 191 KVEKQSPSRPTSFTSSKSKASNPSKEKFSPSELKKWAADDLKKTISWLESQEEKPEQSEI 250
Query: 376 EETSFQGIIACLEDAMTCLKENKRIHSLFDVWEFVPRVVKELAAYEDCQKTSNNISNEEL 197
++ + +GI+ CL+DA+ L++N+ I + + W+ VPRVV+ELA E +K + S ++L
Sbjct: 251 KQIAAEGILTCLQDAIDSLEQNQDIQQITEQWQCVPRVVEELAKLEGTEKVPASPSKKDL 310
Query: 196 LKLAFTFKALYESEFKKI-----RRSSLEVNEKGKCVSKRXXXXXXXXDTIVMDEDEIDR 32
K A K +YE E K+ +++ + + +TI M E+EID
Sbjct: 311 CKRAKACKKIYEEELGKLDNETREKTTQRAKDGRNKATSSDAAGYDSEETIEMTEEEIDL 370
Query: 31 A 29
A
Sbjct: 371 A 371
>XP_009802986.1 PREDICTED: DNA repair protein XRCC1 [Nicotiana sylvestris]
Length = 365
Score = 259 bits (662), Expect = 3e-77
Identities = 147/360 (40%), Positives = 218/360 (60%), Gaps = 13/360 (3%)
Frame = -1
Query: 1060 KDDQSNNGVSKDKINN--SKPSHGQSGTSSHRGNAGMGISKRNDKDSS-SSFSMLMDGVV 890
K DQ+N+ + N S S Q+ + S + N +K + SS S+FS LM+GVV
Sbjct: 5 KKDQTNDSDKNGRKRNLPSWMSSRQASSGSAQSNEAENEAKVSTSTSSGSNFSKLMEGVV 64
Query: 889 FAISGLVNPERGKIRSQALAMGAEYQADWNPGCTLLVCAFPNTPKFKQVKGDGGTIVSKE 710
F +SG VNPERG +RSQAL MGA+Y+ DWN GCTLL+CAFPNTPKF+QV+ D GTIVSKE
Sbjct: 65 FVLSGFVNPERGTLRSQALEMGAKYEPDWNSGCTLLICAFPNTPKFRQVEADNGTIVSKE 124
Query: 709 WITECFNKKRLVEIDPYLMHSGKPWRKRQPSTSDLLNDNSSGQSTESLIKSDNKKKTLSN 530
WITEC+ +++LVEI+ YLMH+GKPWR + S +++S Q + KS +++ S
Sbjct: 125 WITECYKERKLVEIETYLMHAGKPWRCQSVS-----HESSQDQKPSTSRKSHKREEKSSP 179
Query: 529 KKQMNSRVGD--KQWDTKLEYNDDEVQSWVAEDFNATISWLQKQDEKPPIGELEETSFQG 356
K + + + + K ++ +V+ W +D N TISWL+ QDE+P E+++ + +G
Sbjct: 180 FKTTTTPSSEDVRGDEVKDGFSPSKVKKWAIDDLNRTISWLENQDERPEPSEMKKIAAEG 239
Query: 355 IIACLEDAMTCLKENKRIHSLFDVWEFVPRVVKELAAYEDCQKTSNNISNEELLKLAFTF 176
I+ CL+DA+ LK+ + I + + W VPR V+ELA + D + + +L + A T+
Sbjct: 240 ILTCLQDAIDSLKQGQDIRQITEQWACVPRAVEELATF-DSSSVGSAKPHNDLCRQAVTW 298
Query: 175 KALYESEFK--------KIRRSSLEVNEKGKCVSKRXXXXXXXXDTIVMDEDEIDRAESA 20
K +YE E++ KI+ S V+ K ++K DTI M E+EI+RA +A
Sbjct: 299 KQIYELEYRNREDNELLKIKEQSTRVSRKAGDIAK-DVAAYDSDDTIEMTEEEINRAYNA 357
>ONK66566.1 uncharacterized protein A4U43_C06F9580 [Asparagus officinalis]
Length = 459
Score = 262 bits (670), Expect = 3e-77
Identities = 147/351 (41%), Positives = 201/351 (57%), Gaps = 11/351 (3%)
Frame = -1
Query: 1048 SNNGVSKDKINNSKPSHGQSGTSSHRGNAGMGISKRNDKDSSSSFSMLMDGVVFAISGLV 869
S+ G + + G+ TSSH G R+ ++S F+ L+DGVVFA+SG V
Sbjct: 125 SSKGKESKPLKKKQDDAGEH-TSSHAGG-------RDSAQANSQFAKLLDGVVFALSGFV 176
Query: 868 NPERGKIRSQALAMGAEYQADWNPGCTLLVCAFPNTPKFKQVKGDGGTIVSKEWITECFN 689
NPER +RSQAL MGAEY+ DW P CTLLVC+FPNTPKF+QV D GTIVSKEWI+EC+N
Sbjct: 177 NPERSTLRSQALEMGAEYRPDWTPDCTLLVCSFPNTPKFRQVASDCGTIVSKEWISECYN 236
Query: 688 KKRLVEIDPYLMHSGKPWRK------RQPSTSDLLNDNSSGQ----STESLIKSDNKKKT 539
+K+LVEI+ +LMH+GKPWR+ + D LN+ S + S E S K
Sbjct: 237 EKKLVEIERFLMHAGKPWRRNNDQLENKKGPKDALNEESGRRPRRNSPEKFTGSAKSKVG 296
Query: 538 LSNKKQMNSRVGDKQWDTKLEYNDDEVQSWVAEDFNATISWLQKQDEKPPIGELEETSFQ 359
LSN TK ++ +++ W +D N T++WL+ Q+EKP E++ + Q
Sbjct: 297 LSNV-------------TKDHFSPSKIKEWAIDDLNKTVTWLESQEEKPEASEIKAIAAQ 343
Query: 358 GIIACLEDAMTCLKENKRIHSLFDVWEFVPRVVKELAAYEDCQKTSNNISNEELLKLAFT 179
G+I CL D + LKE K I + + W F+P VVK+L E + ++S EL +LA T
Sbjct: 344 GVITCLHDVIEALKEKKDIQLVMEQWMFIPHVVKQLLELETGRSKKGSLSKGELRELAIT 403
Query: 178 FKALYESEFKKIRRSSLEVNEKGKC-VSKRXXXXXXXXDTIVMDEDEIDRA 29
K +YESEF+ + SSL N K K + TI M E+EI+ A
Sbjct: 404 CKKIYESEFENV-DSSLRRNGKQKAGIDDEDDAGFDSDRTIEMTEEEIEIA 453
>XP_012456670.1 PREDICTED: DNA-repair protein XRCC1 isoform X2 [Gossypium raimondii]
XP_012456678.1 PREDICTED: DNA-repair protein XRCC1
isoform X2 [Gossypium raimondii] KJB12805.1 hypothetical
protein B456_002G058300 [Gossypium raimondii] KJB12807.1
hypothetical protein B456_002G058300 [Gossypium
raimondii]
Length = 363
Score = 259 bits (661), Expect = 4e-77
Identities = 139/338 (41%), Positives = 199/338 (58%), Gaps = 9/338 (2%)
Frame = -1
Query: 1015 NSKPSHGQSGTSSHRGNAGMGISKRNDKDSSSSFSMLMDGVVFAISGLVNPERGKIRSQA 836
N SHG + + G S N ++FS L++GVVF +SG VNPER +RSQA
Sbjct: 29 NESKSHGNKSNDAKGHDKGHASSSNN-----TNFSKLLEGVVFVLSGFVNPERSTLRSQA 83
Query: 835 LAMGAEYQADWNPGCTLLVCAFPNTPKFKQVKGDGGTIVSKEWITECFNKKRLVEIDPYL 656
LAMGAEY DWN CTLLVCAF NTPKF+QV+ D GTI+SKEWI EC+ +K+LV+IDPYL
Sbjct: 84 LAMGAEYLPDWNSNCTLLVCAFQNTPKFRQVEADCGTIISKEWILECYAQKKLVDIDPYL 143
Query: 655 MHSGKPWRKRQPSTSDLLNDNSSGQSTESLIKSDNKKKTLSNKKQMNSRVGDKQWDTKLE 476
MH+GKPWR+ S + ++ S + SL KS K + +K +
Sbjct: 144 MHAGKPWRR-----SSISHETSEEKQGSSLTKSYKKVEETQSKTTSGPSKNKVSQLAQDR 198
Query: 475 YNDDEVQSWVAEDFNATISWLQKQDEKPPIGELEETSFQGIIACLEDAMTCLKENKRIHS 296
++ +V+ WV +DFN TISWL+ Q+EKP E+++ + +GI+ CL+DA+ CL + + +
Sbjct: 199 FSPPKVKKWVMDDFNETISWLESQEEKPEPQEIKQVAGEGILTCLQDAIDCLAQKQDVQQ 258
Query: 295 LFDVWEFVPRVVKELAAYEDCQKTSNNISNEELLKLAFTFKALYESEFKKIRRSSL---- 128
+ + W F+PRVVKELA ++ +++ E+LL+ A K +YE E +I SL
Sbjct: 259 ITEQWSFIPRVVKELAIFDG--SNHGSLTKEDLLREAKVCKQIYEDELSRINSGSLKRKR 316
Query: 127 ---EVNEKGKCVSKR--XXXXXXXXDTIVMDEDEIDRA 29
+ E+G V + +TI M E+EI+ A
Sbjct: 317 PKTDGGEEGNKVETKAIFASGYDSDETIKMTEEEIELA 354
>XP_017623140.1 PREDICTED: DNA-repair protein XRCC1 isoform X1 [Gossypium arboreum]
XP_017623141.1 PREDICTED: DNA-repair protein XRCC1
isoform X1 [Gossypium arboreum] XP_017623142.1 PREDICTED:
DNA-repair protein XRCC1 isoform X1 [Gossypium arboreum]
XP_017623143.1 PREDICTED: DNA-repair protein XRCC1
isoform X1 [Gossypium arboreum]
Length = 367
Score = 259 bits (661), Expect = 5e-77
Identities = 132/301 (43%), Positives = 186/301 (61%), Gaps = 4/301 (1%)
Frame = -1
Query: 1015 NSKPSHGQSGTSSHRGNAGMGISKRNDKDSSSSFSMLMDGVVFAISGLVNPERGKIRSQA 836
N SHG + + G S N ++FS L++GVVFA+SG VNPER +RSQA
Sbjct: 29 NESKSHGNKSNDAKGHDKGHASSSNN-----TNFSKLLEGVVFALSGFVNPERSTLRSQA 83
Query: 835 LAMGAEYQADWNPGCTLLVCAFPNTPKFKQVKGDGGTIVSKEWITECFNKKRLVEIDPYL 656
LAMGAEYQ DWN CTLL CAF NTPKF+QV+ D GTI+SKEWI EC+ +K+LV+IDPYL
Sbjct: 84 LAMGAEYQPDWNSNCTLLACAFQNTPKFRQVEADCGTIISKEWILECYAQKKLVDIDPYL 143
Query: 655 MHSGKPWRKRQPSTSDLLNDNSSGQSTE----SLIKSDNKKKTLSNKKQMNSRVGDKQWD 488
MH+GKPWR+ S + ++ S G E SL KS K + +K
Sbjct: 144 MHAGKPWRR-----SSISHETSQGVLAEKQGSSLTKSYKKVEETQSKTTSGPSKNKASQL 198
Query: 487 TKLEYNDDEVQSWVAEDFNATISWLQKQDEKPPIGELEETSFQGIIACLEDAMTCLKENK 308
+ ++ +V+ WV +DFN TISWL+ Q+EKP E+++ + +GI+ CL+DA+ CL + +
Sbjct: 199 AQDRFSPPKVKKWVMDDFNETISWLESQEEKPEPQEIKQVAGEGILTCLQDAIDCLAQKQ 258
Query: 307 RIHSLFDVWEFVPRVVKELAAYEDCQKTSNNISNEELLKLAFTFKALYESEFKKIRRSSL 128
+ + + W F+PRVVKELA ++ +++ E+LL+ A K +YE E +I SL
Sbjct: 259 DVQQITEQWSFIPRVVKELAIFD--ASNHGSLTKEDLLREAKVCKQIYEDELSRINSGSL 316
Query: 127 E 125
+
Sbjct: 317 K 317
>XP_016739767.1 PREDICTED: DNA-repair protein XRCC1-like isoform X2 [Gossypium
hirsutum]
Length = 363
Score = 258 bits (660), Expect = 6e-77
Identities = 129/297 (43%), Positives = 184/297 (61%)
Frame = -1
Query: 1015 NSKPSHGQSGTSSHRGNAGMGISKRNDKDSSSSFSMLMDGVVFAISGLVNPERGKIRSQA 836
N SHG + + G S N ++FS L++GVVF +SG VNPER +RSQA
Sbjct: 29 NESKSHGNKSNDAKGHDKGHASSSNN-----TNFSKLLEGVVFVLSGFVNPERSTLRSQA 83
Query: 835 LAMGAEYQADWNPGCTLLVCAFPNTPKFKQVKGDGGTIVSKEWITECFNKKRLVEIDPYL 656
LAMGAEY DWN CTLLVCAF NTPKF+QV+ D GTI+SKEWI EC+ +K+LV+IDPYL
Sbjct: 84 LAMGAEYLPDWNSNCTLLVCAFQNTPKFRQVEADCGTIISKEWILECYAQKKLVDIDPYL 143
Query: 655 MHSGKPWRKRQPSTSDLLNDNSSGQSTESLIKSDNKKKTLSNKKQMNSRVGDKQWDTKLE 476
MH+GKPWR+ S + ++ S + SL KS K + +K +
Sbjct: 144 MHAGKPWRR-----SSISHETSEEKQGSSLTKSYKKVEETQSKTTFGPSKNKASQLAQDR 198
Query: 475 YNDDEVQSWVAEDFNATISWLQKQDEKPPIGELEETSFQGIIACLEDAMTCLKENKRIHS 296
++ +V+ WV +DFN TISWL+ Q+EKP E+++ + +GI+ CL+DA+ CL + + +
Sbjct: 199 FSPPKVKKWVMDDFNETISWLESQEEKPEPQEIKQVAGEGILTCLQDAIDCLAQKQDVQQ 258
Query: 295 LFDVWEFVPRVVKELAAYEDCQKTSNNISNEELLKLAFTFKALYESEFKKIRRSSLE 125
+ + W F+PRVVKELA ++ +++ E+LL+ A K +YE E +I SL+
Sbjct: 259 ITEQWSFIPRVVKELAIFDG--SNHGSLTKEDLLREAKVCKQIYEDELSRINSGSLK 313
>XP_016742559.1 PREDICTED: DNA-repair protein XRCC1-like isoform X1 [Gossypium
hirsutum] XP_016742560.1 PREDICTED: DNA-repair protein
XRCC1-like isoform X1 [Gossypium hirsutum] XP_016742562.1
PREDICTED: DNA-repair protein XRCC1-like isoform X1
[Gossypium hirsutum] XP_016742563.1 PREDICTED: DNA-repair
protein XRCC1-like isoform X1 [Gossypium hirsutum]
XP_016742564.1 PREDICTED: DNA-repair protein XRCC1-like
isoform X1 [Gossypium hirsutum] XP_016742565.1 PREDICTED:
DNA-repair protein XRCC1-like isoform X1 [Gossypium
hirsutum] XP_016742566.1 PREDICTED: DNA-repair protein
XRCC1-like isoform X1 [Gossypium hirsutum] XP_016742567.1
PREDICTED: DNA-repair protein XRCC1-like isoform X1
[Gossypium hirsutum] XP_016742568.1 PREDICTED: DNA-repair
protein XRCC1-like isoform X1 [Gossypium hirsutum]
XP_016742569.1 PREDICTED: DNA-repair protein XRCC1-like
isoform X1 [Gossypium hirsutum]
Length = 367
Score = 258 bits (660), Expect = 6e-77
Identities = 133/301 (44%), Positives = 186/301 (61%), Gaps = 4/301 (1%)
Frame = -1
Query: 1015 NSKPSHGQSGTSSHRGNAGMGISKRNDKDSSSSFSMLMDGVVFAISGLVNPERGKIRSQA 836
N SHG + + G S N ++FS L++GVVFA+SG VNPER +RSQA
Sbjct: 29 NESKSHGNKSNDAKGHDKGHASSSNN-----TNFSKLLEGVVFALSGFVNPERSTLRSQA 83
Query: 835 LAMGAEYQADWNPGCTLLVCAFPNTPKFKQVKGDGGTIVSKEWITECFNKKRLVEIDPYL 656
LAMGAEYQ DWN CTLLVCAF NTPKF+QV+ D GTI+SKEWI EC+ +K+LV+IDPYL
Sbjct: 84 LAMGAEYQPDWNSNCTLLVCAFQNTPKFRQVEADCGTIISKEWILECYAQKKLVDIDPYL 143
Query: 655 MHSGKPWRKRQPSTSDLLNDNSSGQSTE----SLIKSDNKKKTLSNKKQMNSRVGDKQWD 488
MH+GKPWR+ S + ++ S G E SL KS K + +K
Sbjct: 144 MHAGKPWRR-----SSISHETSQGVLAEKQGSSLTKSYKKVEETQSKTTSGPSKNKASQL 198
Query: 487 TKLEYNDDEVQSWVAEDFNATISWLQKQDEKPPIGELEETSFQGIIACLEDAMTCLKENK 308
+ ++ +V+ WV +DFN TISWL+ Q+EKP E+++ + +GI+ CL+DA+ CL + +
Sbjct: 199 AQDRFSPPKVKKWVMDDFNETISWLESQEEKPEPQEIKQVAGEGILTCLQDAIDCLAQKQ 258
Query: 307 RIHSLFDVWEFVPRVVKELAAYEDCQKTSNNISNEELLKLAFTFKALYESEFKKIRRSSL 128
+ + + W F+PRVVKELA + +++ E+LL+ A K +YE E +I SL
Sbjct: 259 DVQQITEQWSFIPRVVKELAFLD--ASNHGSLTKEDLLREAKVCKQIYEDELSRINSGSL 316
Query: 127 E 125
+
Sbjct: 317 K 317
>XP_009623792.1 PREDICTED: DNA-repair protein XRCC1 [Nicotiana tomentosiformis]
Length = 365
Score = 258 bits (658), Expect = 1e-76
Identities = 148/360 (41%), Positives = 217/360 (60%), Gaps = 13/360 (3%)
Frame = -1
Query: 1060 KDDQSNNGVSKDKINN--SKPSHGQSGTSSHRGNAGMGISKRNDKDSS-SSFSMLMDGVV 890
K DQ+N+G + N S S Q+ + S + N +K + SS S+FS LM+GVV
Sbjct: 5 KKDQTNDGGKNGRKRNLPSWMSSRQASSGSGQSNEAENEAKISTSTSSGSNFSKLMEGVV 64
Query: 889 FAISGLVNPERGKIRSQALAMGAEYQADWNPGCTLLVCAFPNTPKFKQVKGDGGTIVSKE 710
F +SG VNPERG +RSQAL MGA+Y+ DWN GCTLL+CAFPNTPKF+QV+ D GTIVSKE
Sbjct: 65 FVLSGFVNPERGTLRSQALEMGAKYEPDWNSGCTLLICAFPNTPKFRQVEADNGTIVSKE 124
Query: 709 WITECFNKKRLVEIDPYLMHSGKPWRKRQPSTSDLLNDNSSGQSTESLIKSDNKKKTLSN 530
WITEC+ +++LVEI+ YLMH+GKPWR + S +++S Q + KS ++K S
Sbjct: 125 WITECYKEQKLVEIETYLMHAGKPWRCQSVS-----HESSQDQKPSTSRKSHKREKKSSP 179
Query: 529 KKQMNSRVGD--KQWDTKLEYNDDEVQSWVAEDFNATISWLQKQDEKPPIGELEETSFQG 356
K + + + + K ++ +V+ W +D N ISWL+ QDE+P E+++ + +G
Sbjct: 180 FKTTTTPSSEAVRCDEVKDGFSPSKVKKWAIDDLNRIISWLENQDERPEPSEMKKIAAEG 239
Query: 355 IIACLEDAMTCLKENKRIHSLFDVWEFVPRVVKELAAYEDCQKTSNNISNEELLKLAFTF 176
I+ CL+DA+ LK+ + I + + W VPR V+ELA + D + +++L + A T
Sbjct: 240 ILTCLQDAIDSLKQGQDIRQITEQWACVPRAVEELAKF-DSSSAGSAKPHKDLCRQAVTC 298
Query: 175 KALYESEFK--------KIRRSSLEVNEKGKCVSKRXXXXXXXXDTIVMDEDEIDRAESA 20
K +YE E++ KI+ S V+ K V+ DTI M E+EID+A +A
Sbjct: 299 KQIYELEYRNREDDELLKIKEQSARVSRKAGDVA-NDVAAYDSDDTIEMTEEEIDQAYNA 357
>XP_016459484.1 PREDICTED: DNA-repair protein XRCC1 [Nicotiana tabacum]
Length = 365
Score = 257 bits (656), Expect = 2e-76
Identities = 147/360 (40%), Positives = 217/360 (60%), Gaps = 13/360 (3%)
Frame = -1
Query: 1060 KDDQSNNGVSKDKINN--SKPSHGQSGTSSHRGNAGMGISKRNDKDSS-SSFSMLMDGVV 890
K DQ+N+G + N S S Q+ + S + N +K + SS S+FS LM+GVV
Sbjct: 5 KKDQTNDGGKNGRKRNLPSWMSSRQASSGSGQSNEAENEAKISTSTSSGSNFSKLMEGVV 64
Query: 889 FAISGLVNPERGKIRSQALAMGAEYQADWNPGCTLLVCAFPNTPKFKQVKGDGGTIVSKE 710
F +SG VNPERG +RSQAL MGA+Y+ DWN GCTLL+CAFPNTPKF+QV+ D GTIVSKE
Sbjct: 65 FVLSGFVNPERGTLRSQALEMGAKYEPDWNSGCTLLICAFPNTPKFRQVEADNGTIVSKE 124
Query: 709 WITECFNKKRLVEIDPYLMHSGKPWRKRQPSTSDLLNDNSSGQSTESLIKSDNKKKTLSN 530
WITEC+ +++LVEI+ YLMH+GKPWR + S +++S Q + KS ++K S
Sbjct: 125 WITECYKEQKLVEIETYLMHAGKPWRCQSVS-----HESSQDQKPSTSRKSHKREKKSSP 179
Query: 529 KKQMNSRVGD--KQWDTKLEYNDDEVQSWVAEDFNATISWLQKQDEKPPIGELEETSFQG 356
K + + + + K ++ +V+ W +D N ISWL+ QDE+P E+++ + +G
Sbjct: 180 FKTTTTPSSEAVRCDEVKDGFSPSKVKKWAIDDLNRIISWLENQDERPEPSEMKKIAAEG 239
Query: 355 IIACLEDAMTCLKENKRIHSLFDVWEFVPRVVKELAAYEDCQKTSNNISNEELLKLAFTF 176
I+ C++DA+ LK+ + I + + W VPR V+ELA + D + +++L + A T
Sbjct: 240 ILTCIQDAIDSLKQGQDIRQITEQWACVPRAVEELAKF-DSSSAGSAKPHKDLCRQAVTC 298
Query: 175 KALYESEFK--------KIRRSSLEVNEKGKCVSKRXXXXXXXXDTIVMDEDEIDRAESA 20
K +YE E++ KI+ S V+ K V+ DTI M E+EID+A +A
Sbjct: 299 KQIYELEYRNREDDELLKIKEQSARVSRKAGDVA-NDVAAYDSDDTIEMTEEEIDQAYNA 357
>XP_012456602.1 PREDICTED: DNA-repair protein XRCC1 isoform X1 [Gossypium raimondii]
XP_012456613.1 PREDICTED: DNA-repair protein XRCC1
isoform X1 [Gossypium raimondii] XP_012456623.1
PREDICTED: DNA-repair protein XRCC1 isoform X1 [Gossypium
raimondii] XP_012456632.1 PREDICTED: DNA-repair protein
XRCC1 isoform X1 [Gossypium raimondii] XP_012456637.1
PREDICTED: DNA-repair protein XRCC1 isoform X1 [Gossypium
raimondii] XP_012456648.1 PREDICTED: DNA-repair protein
XRCC1 isoform X1 [Gossypium raimondii] XP_012456656.1
PREDICTED: DNA-repair protein XRCC1 isoform X1 [Gossypium
raimondii] XP_012456664.1 PREDICTED: DNA-repair protein
XRCC1 isoform X1 [Gossypium raimondii] KJB12809.1
hypothetical protein B456_002G058300 [Gossypium
raimondii] KJB12810.1 hypothetical protein
B456_002G058300 [Gossypium raimondii]
Length = 367
Score = 257 bits (656), Expect = 3e-76
Identities = 141/342 (41%), Positives = 200/342 (58%), Gaps = 13/342 (3%)
Frame = -1
Query: 1015 NSKPSHGQSGTSSHRGNAGMGISKRNDKDSSSSFSMLMDGVVFAISGLVNPERGKIRSQA 836
N SHG + + G S N ++FS L++GVVF +SG VNPER +RSQA
Sbjct: 29 NESKSHGNKSNDAKGHDKGHASSSNN-----TNFSKLLEGVVFVLSGFVNPERSTLRSQA 83
Query: 835 LAMGAEYQADWNPGCTLLVCAFPNTPKFKQVKGDGGTIVSKEWITECFNKKRLVEIDPYL 656
LAMGAEY DWN CTLLVCAF NTPKF+QV+ D GTI+SKEWI EC+ +K+LV+IDPYL
Sbjct: 84 LAMGAEYLPDWNSNCTLLVCAFQNTPKFRQVEADCGTIISKEWILECYAQKKLVDIDPYL 143
Query: 655 MHSGKPWRKRQPSTSDLLNDNSSGQSTE----SLIKSDNKKKTLSNKKQMNSRVGDKQWD 488
MH+GKPWR+ S + ++ S G E SL KS K + +K
Sbjct: 144 MHAGKPWRR-----SSISHETSEGVLAEKQGSSLTKSYKKVEETQSKTTSGPSKNKVSQL 198
Query: 487 TKLEYNDDEVQSWVAEDFNATISWLQKQDEKPPIGELEETSFQGIIACLEDAMTCLKENK 308
+ ++ +V+ WV +DFN TISWL+ Q+EKP E+++ + +GI+ CL+DA+ CL + +
Sbjct: 199 AQDRFSPPKVKKWVMDDFNETISWLESQEEKPEPQEIKQVAGEGILTCLQDAIDCLAQKQ 258
Query: 307 RIHSLFDVWEFVPRVVKELAAYEDCQKTSNNISNEELLKLAFTFKALYESEFKKIRRSSL 128
+ + + W F+PRVVKELA ++ +++ E+LL+ A K +YE E +I SL
Sbjct: 259 DVQQITEQWSFIPRVVKELAIFDG--SNHGSLTKEDLLREAKVCKQIYEDELSRINSGSL 316
Query: 127 -------EVNEKGKCVSKR--XXXXXXXXDTIVMDEDEIDRA 29
+ E+G V + +TI M E+EI+ A
Sbjct: 317 KRKRPKTDGGEEGNKVETKAIFASGYDSDETIKMTEEEIELA 358
>XP_016739765.1 PREDICTED: DNA-repair protein XRCC1-like isoform X1 [Gossypium
hirsutum] XP_016739766.1 PREDICTED: DNA-repair protein
XRCC1-like isoform X1 [Gossypium hirsutum]
Length = 367
Score = 256 bits (655), Expect = 4e-76
Identities = 131/301 (43%), Positives = 185/301 (61%), Gaps = 4/301 (1%)
Frame = -1
Query: 1015 NSKPSHGQSGTSSHRGNAGMGISKRNDKDSSSSFSMLMDGVVFAISGLVNPERGKIRSQA 836
N SHG + + G S N ++FS L++GVVF +SG VNPER +RSQA
Sbjct: 29 NESKSHGNKSNDAKGHDKGHASSSNN-----TNFSKLLEGVVFVLSGFVNPERSTLRSQA 83
Query: 835 LAMGAEYQADWNPGCTLLVCAFPNTPKFKQVKGDGGTIVSKEWITECFNKKRLVEIDPYL 656
LAMGAEY DWN CTLLVCAF NTPKF+QV+ D GTI+SKEWI EC+ +K+LV+IDPYL
Sbjct: 84 LAMGAEYLPDWNSNCTLLVCAFQNTPKFRQVEADCGTIISKEWILECYAQKKLVDIDPYL 143
Query: 655 MHSGKPWRKRQPSTSDLLNDNSSGQSTE----SLIKSDNKKKTLSNKKQMNSRVGDKQWD 488
MH+GKPWR+ S + ++ S G E SL KS K + +K
Sbjct: 144 MHAGKPWRR-----SSISHETSEGVLAEKQGSSLTKSYKKVEETQSKTTFGPSKNKASQL 198
Query: 487 TKLEYNDDEVQSWVAEDFNATISWLQKQDEKPPIGELEETSFQGIIACLEDAMTCLKENK 308
+ ++ +V+ WV +DFN TISWL+ Q+EKP E+++ + +GI+ CL+DA+ CL + +
Sbjct: 199 AQDRFSPPKVKKWVMDDFNETISWLESQEEKPEPQEIKQVAGEGILTCLQDAIDCLAQKQ 258
Query: 307 RIHSLFDVWEFVPRVVKELAAYEDCQKTSNNISNEELLKLAFTFKALYESEFKKIRRSSL 128
+ + + W F+PRVVKELA ++ +++ E+LL+ A K +YE E +I SL
Sbjct: 259 DVQQITEQWSFIPRVVKELAIFDG--SNHGSLTKEDLLREAKVCKQIYEDELSRINSGSL 316
Query: 127 E 125
+
Sbjct: 317 K 317
>XP_010062442.1 PREDICTED: DNA-repair protein XRCC1 [Eucalyptus grandis]
Length = 402
Score = 258 bits (658), Expect = 4e-76
Identities = 154/414 (37%), Positives = 221/414 (53%), Gaps = 14/414 (3%)
Frame = -1
Query: 1228 KRKLPGWKVPSETSKVSEEEHVNALDPNGTNAKKLLATAEDTGDEKKSISTQVKGRKDDQ 1049
KR LP W +H N N KK + ED + Q KG +
Sbjct: 17 KRSLPSWM---------NSKHKG----NSRNGKKAAGSGEDEDTGENERPEQSKGLDGEL 63
Query: 1048 SNNGVSKDKINNSKPSHGQSGTSSHRGNAGMGISKRNDKDSSSSFSMLMDGVVFAISGLV 869
++ ++K + KPS T FS L++GVVF +SG V
Sbjct: 64 VSSTLAKKSAGSGKPSSLSLDTLP--------------------FSKLLEGVVFVLSGFV 103
Query: 868 NPERGKIRSQALAMGAEYQADWNPGCTLLVCAFPNTPKFKQVKGDGGTIVSKEWITECFN 689
NPER +RSQAL MGAEYQ DWN CTLL+CAFPNTPKF+QV+ D GTIV+KEWITEC+
Sbjct: 104 NPERSTLRSQALEMGAEYQPDWNSDCTLLICAFPNTPKFRQVEADNGTIVAKEWITECYT 163
Query: 688 KKRLVEIDPYLMHSGKPWRKRQPSTS---DLLNDNSSGQSTESLIKSDNKKKTLSNKKQM 518
+++LV+I+ LMH+GKPWR+R S D N S G +S +++ T ++ K+
Sbjct: 164 QRKLVDIESNLMHAGKPWRRRSTSDKSGRDSENSPSRGYHKHVEKRSQSRQLTAASSKKA 223
Query: 517 NSRVGDKQWDTKLEYNDDEVQSWVAEDFNATISWLQKQDEKPPIGELEETSFQGIIACLE 338
NS V T+ +V+SW D N T +WL+ ++EKPP E+++ + +GII CL+
Sbjct: 224 NSNV------TEDVLIPSKVKSWAIIDLNRTTTWLESREEKPPADEIKKIAAEGIITCLQ 277
Query: 337 DAMTCLKENKRIHSLFDVWEFVPRVVKELAAYEDCQKTSNNISNEELLKLAFTFKALYES 158
DA+ L++N+ + + + W VPRVV+EL E T+ +ISN +L + A K +YE+
Sbjct: 278 DAIDALEQNQDVRRISEQWNIVPRVVEELIKLEGSGDTATSISNADLHRKAVDCKQIYEA 337
Query: 157 EFKKI---------RRSSLEVNEKGK--CVSKRXXXXXXXXDTIVMDEDEIDRA 29
E+ K+ + S+ + KGK VS +TI M E+EI+ A
Sbjct: 338 EYSKLEYDASVKRKKPSTDDRKSKGKKAAVSADAVAAYDSDETIEMTEEEIELA 391