BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00013400
         (1193 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ADE76199.1 unknown [Picea sitchensis]                                 444   e-152
XP_019198572.1 PREDICTED: RNA pseudouridine synthase 5 [Ipomoea ...   422   e-143
XP_010067287.1 PREDICTED: RNA pseudouridine synthase 5 isoform X...   421   e-143
XP_019245848.1 PREDICTED: RNA pseudouridine synthase 5 isoform X...   419   e-142
XP_006485880.2 PREDICTED: RNA pseudouridine synthase 5 isoform X...   414   e-140
XP_019245847.1 PREDICTED: RNA pseudouridine synthase 5 isoform X...   415   e-140
XP_010067286.1 PREDICTED: RNA pseudouridine synthase 5 isoform X...   413   e-140
XP_009589062.1 PREDICTED: RNA pseudouridine synthase 5 isoform X...   412   e-139
XP_004307403.1 PREDICTED: RNA pseudouridine synthase 5 [Fragaria...   411   e-139
XP_017643285.1 PREDICTED: RNA pseudouridine synthase 5 isoform X...   411   e-139
XP_016495596.1 PREDICTED: RNA pseudouridine synthase 5 isoform X...   409   e-138
XP_009333717.1 PREDICTED: RNA pseudouridine synthase 5 isoform X...   409   e-138
XP_006485879.2 PREDICTED: RNA pseudouridine synthase 5 isoform X...   409   e-138
KNA10992.1 hypothetical protein SOVF_139290 [Spinacia oleracea]       409   e-138
XP_010317224.1 PREDICTED: RNA pseudouridine synthase 5 isoform X...   409   e-138
OIT03527.1 rna uridine synthase 5 [Nicotiana attenuata]               408   e-138
OAY45924.1 hypothetical protein MANES_07G103500 [Manihot esculenta]   408   e-138
XP_010317225.1 PREDICTED: RNA pseudouridine synthase 5 isoform X...   408   e-138
XP_004233537.1 PREDICTED: RNA pseudouridine synthase 5 isoform X...   409   e-138
XP_009589060.1 PREDICTED: RNA pseudouridine synthase 5 isoform X...   407   e-138

>ADE76199.1 unknown [Picea sitchensis]
          Length = 386

 Score =  444 bits (1143), Expect = e-152
 Identities = 221/375 (58%), Positives = 279/375 (74%), Gaps = 4/375 (1%)
 Frame = +3

Query: 81   VEFGVPWPEYNEGLDYKDIVKPPSSSSCVTLLDFYSANYKSSAPREGWLQRIQNGQISVD 260
            +EFG+PWPE+N+GL Y D VK  S+S+  TL+DFYS+ Y+SSAPR+GWLQRI NGQI+VD
Sbjct: 1    MEFGIPWPEFNDGLSYTDTVK--STSTPPTLIDFYSSRYESSAPRKGWLQRIHNGQITVD 58

Query: 261  GMVVKNADTTLSPGSTLVYHRVPWKEPAAPYKIIILYEDEHLLVINKPAGLQVLPGGLFQ 440
            G  V   DT L  G  LVYHR+ W+EP AP K+ +L+ED+HLL +NKP+GLQVLPGGLFQ
Sbjct: 59   GKTVNEPDTVLRIGPKLVYHRLSWREPIAPCKLYVLFEDDHLLAVNKPSGLQVLPGGLFQ 118

Query: 441  QRTVLAQLQWKYTQSANANMFTDK-IKHCSIACPAPVHRLGRGTSGILLCAKTKGAKSKL 617
            QRTVL QL+WK +QS+       K +     + P PVHRLGRGTSGILLCAK++ AKS+L
Sbjct: 119  QRTVLTQLKWKASQSSKYRSVAGKAVADFQESQPVPVHRLGRGTSGILLCAKSEIAKSQL 178

Query: 618  SLDFADGTLSMKNVRSTANDVTK---KRQISKIYRASVQGIVDHNTIVISQPIGKIQYPG 788
            + DFADGT  +   R++++D+     KR+I K YRA   GI++ N I I QPIGK++YPG
Sbjct: 179  AADFADGTSFIS--RNSSSDIDAGEIKRRIYKTYRALADGIIEQNKIAIKQPIGKMRYPG 236

Query: 789  VASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIGHPLVGDP 968
            V SGLYVA+PTGKQAES++ VL RDK RNCTLVEVEIYSGR HQIRIH+++IGHPL+GDP
Sbjct: 237  VRSGLYVASPTGKQAESRITVLSRDKNRNCTLVEVEIYSGRPHQIRIHLSFIGHPLLGDP 296

Query: 969  LYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYQLHAYQVILQHPIS 1148
            LYV+GG+P                  FAEDGGY++    +PGDCGY LHAY++   HP+S
Sbjct: 297  LYVAGGRP--SITVSDSYSESREGDNFAEDGGYQKPLNPVPGDCGYYLHAYRLAFHHPVS 354

Query: 1149 NKAMKIVAPPPTTLS 1193
            ++ ++IVAPPP  LS
Sbjct: 355  DEVVEIVAPPPPMLS 369


>XP_019198572.1 PREDICTED: RNA pseudouridine synthase 5 [Ipomoea nil] XP_019198573.1
            PREDICTED: RNA pseudouridine synthase 5 [Ipomoea nil]
            XP_019198574.1 PREDICTED: RNA pseudouridine synthase 5
            [Ipomoea nil]
          Length = 380

 Score =  422 bits (1085), Expect = e-143
 Identities = 210/390 (53%), Positives = 279/390 (71%), Gaps = 2/390 (0%)
 Frame = +3

Query: 27   MEELEKKESMPSPSVVAPVE--FGVPWPEYNEGLDYKDIVKPPSSSSCVTLLDFYSANYK 200
            M   + + S PS +   P    FG PWPE+N+GL Y D+V+P  S + +TL++FYS  YK
Sbjct: 1    MSSSKAENSAPSTAAATPTRRTFGEPWPEFNDGLTYHDLVRP--SDAGLTLIEFYSRKYK 58

Query: 201  SSAPREGWLQRIQNGQISVDGMVVKNADTTLSPGSTLVYHRVPWKEPAAPYKIIILYEDE 380
            +SAP +GWLQRIQN QI++DG VV N D +LSPG+ LVYHR+PWKEP APY + +L+ED+
Sbjct: 59   NSAPLQGWLQRIQNKQITIDGRVVSNPDASLSPGAQLVYHRLPWKEPNAPYVLEVLFEDD 118

Query: 381  HLLVINKPAGLQVLPGGLFQQRTVLAQLQWKYTQSANANMFTDKIKHCSIACPAPVHRLG 560
             ++ +NKP+GLQVLPGGLFQQRTVL QLQW+ ++ ++ +   +       + P PVHRLG
Sbjct: 119  DMIALNKPSGLQVLPGGLFQQRTVLTQLQWRASKLSSLSSSGE-------SHPVPVHRLG 171

Query: 561  RGTSGILLCAKTKGAKSKLSLDFADGTLSMKNVRSTANDVTKKRQISKIYRASVQGIVDH 740
            RGTSGILLCAKTK AKS+LS  FADGT  ++  R +  +V + R+I KIYRA V G+++ 
Sbjct: 172  RGTSGILLCAKTKLAKSRLSAYFADGTSIVQEKRYSNLEVMRVRKIIKIYRALVSGVINE 231

Query: 741  NTIVISQPIGKIQYPGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQ 920
            + +VI QPIG ++YPGVA GLYVA+P+GK A S V VL R  ++NCTLVEVEI SGR HQ
Sbjct: 232  DELVIEQPIGMVRYPGVAKGLYVASPSGKPALSNVRVLERQVEKNCTLVEVEIQSGRPHQ 291

Query: 921  IRIHMAYIGHPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDC 1100
            IRIH+++IGHPL+GDPLY+ GG+P+                 FA+DGGY R    +PGDC
Sbjct: 292  IRIHLSFIGHPLIGDPLYIDGGQPM-------CFDPDLIDESFAQDGGYRRPENPVPGDC 344

Query: 1101 GYQLHAYQVILQHPISNKAMKIVAPPPTTL 1190
            GY LHA+++ L HPI+++ + I AP P+ L
Sbjct: 345  GYNLHAHKLALPHPITDELIAINAPLPSIL 374


>XP_010067287.1 PREDICTED: RNA pseudouridine synthase 5 isoform X2 [Eucalyptus
            grandis] KCW65382.1 hypothetical protein EUGRSUZ_G02814
            [Eucalyptus grandis]
          Length = 377

 Score =  421 bits (1083), Expect = e-143
 Identities = 211/375 (56%), Positives = 277/375 (73%)
 Frame = +3

Query: 66   SVVAPVEFGVPWPEYNEGLDYKDIVKPPSSSSCVTLLDFYSANYKSSAPREGWLQRIQNG 245
            +  AP  FGVPWPE N+G+ YKD+V  PSS    TL+ FYS+ Y +SAP +GWLQRIQNG
Sbjct: 2    TTAAPRGFGVPWPELNDGIFYKDVV--PSSDHETTLIQFYSSKYGNSAPVQGWLQRIQNG 59

Query: 246  QISVDGMVVKNADTTLSPGSTLVYHRVPWKEPAAPYKIIILYEDEHLLVINKPAGLQVLP 425
            QI +DG VV + + ++S G  +VYHR+PWKEP APY + ILYED++++ +NKP+GLQVLP
Sbjct: 60   QIKIDGRVVTDPNESVSAGLEVVYHRLPWKEPDAPYFLGILYEDDNMIALNKPSGLQVLP 119

Query: 426  GGLFQQRTVLAQLQWKYTQSANANMFTDKIKHCSIACPAPVHRLGRGTSGILLCAKTKGA 605
            GGLFQQRTVL+QLQW+   S  + + + +        P PVHRLGRGTSGILLCAKTK A
Sbjct: 120  GGLFQQRTVLSQLQWQ--DSKQSTLLSSQEPQ-----PVPVHRLGRGTSGILLCAKTKIA 172

Query: 606  KSKLSLDFADGTLSMKNVRSTANDVTKKRQISKIYRASVQGIVDHNTIVISQPIGKIQYP 785
            KS+LS+ FADGT  +   R+T  + +  R+ISKIYRA V G+VD + ++I++PIG I+YP
Sbjct: 173  KSRLSIYFADGTSLVGGKRNTTKEPSSVRKISKIYRALVNGLVDEDEVIITEPIGVIKYP 232

Query: 786  GVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIGHPLVGD 965
            GVA GLYVA+P+GK A S+V VL R+ + NC+LV+VEI SGR HQIRIH+++IGHPL+GD
Sbjct: 233  GVAKGLYVASPSGKPALSKVKVLERNVQGNCSLVQVEIQSGRPHQIRIHLSFIGHPLLGD 292

Query: 966  PLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYQLHAYQVILQHPI 1145
            PLYVSGGKP                  FA+DGGY R  +++PGDCGY LHA+Q++L HP+
Sbjct: 293  PLYVSGGKP-------GCFDSQSVDEGFAQDGGYCRPQHAVPGDCGYFLHAHQLLLSHPV 345

Query: 1146 SNKAMKIVAPPPTTL 1190
            +++ +KI AP P+ L
Sbjct: 346  TDEVIKITAPLPSIL 360


>XP_019245848.1 PREDICTED: RNA pseudouridine synthase 5 isoform X2 [Nicotiana
            attenuata]
          Length = 415

 Score =  419 bits (1077), Expect = e-142
 Identities = 215/384 (55%), Positives = 270/384 (70%)
 Frame = +3

Query: 39   EKKESMPSPSVVAPVEFGVPWPEYNEGLDYKDIVKPPSSSSCVTLLDFYSANYKSSAPRE 218
            +K E    PS      FG PWPE+N+GL Y DIV+P  +   +TL++FYS  YKSSAP +
Sbjct: 3    KKAELAAPPSAAETAYFGEPWPEFNDGLTYHDIVRPIDAG--LTLIEFYSRKYKSSAPLQ 60

Query: 219  GWLQRIQNGQISVDGMVVKNADTTLSPGSTLVYHRVPWKEPAAPYKIIILYEDEHLLVIN 398
            GWLQRIQN QI+VDG VV   DT L  G+ LVYHR+PW+EP APY + +L+ED++L+ +N
Sbjct: 61   GWLQRIQNKQITVDGKVVTIPDTELRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIALN 120

Query: 399  KPAGLQVLPGGLFQQRTVLAQLQWKYTQSANANMFTDKIKHCSIACPAPVHRLGRGTSGI 578
            KP+GLQVLPGGLFQQRTVL QLQW      + +  T     C    P PVHRLGRGTSGI
Sbjct: 121  KPSGLQVLPGGLFQQRTVLTQLQW------HVSKLTTSSSGCQKTHPVPVHRLGRGTSGI 174

Query: 579  LLCAKTKGAKSKLSLDFADGTLSMKNVRSTANDVTKKRQISKIYRASVQGIVDHNTIVIS 758
            LLCAKTK AKS+L+  FA+GT S+   + T ++  K R+ISKIYRA V G++D + +VI 
Sbjct: 175  LLCAKTKLAKSRLAAYFAEGT-SVVEDKYTNSECKKMRKISKIYRALVSGVIDMDEVVIK 233

Query: 759  QPIGKIQYPGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMA 938
            QPIG I+YPGVA GLYVA+P+GK A S V VL RD + N TLV+VEI SGR HQIRIH++
Sbjct: 234  QPIGTIKYPGVAKGLYVASPSGKPALSSVRVLERDLENNSTLVQVEIQSGRPHQIRIHLS 293

Query: 939  YIGHPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYQLHA 1118
            +IG PL+GDPLYVSGG+P                  F +DGGY+R    +PGDCGY LHA
Sbjct: 294  FIGLPLIGDPLYVSGGQP-------KCFDPELMDESFEKDGGYQRPENPVPGDCGYNLHA 346

Query: 1119 YQVILQHPISNKAMKIVAPPPTTL 1190
            +Q++L HPI+N+ +KI AP P+ L
Sbjct: 347  HQIVLIHPITNELIKITAPLPSIL 370


>XP_006485880.2 PREDICTED: RNA pseudouridine synthase 5 isoform X2 [Citrus sinensis]
            XP_006485881.2 PREDICTED: RNA pseudouridine synthase 5
            isoform X2 [Citrus sinensis]
          Length = 388

 Score =  414 bits (1063), Expect = e-140
 Identities = 211/368 (57%), Positives = 269/368 (73%)
 Frame = +3

Query: 87   FGVPWPEYNEGLDYKDIVKPPSSSSCVTLLDFYSANYKSSAPREGWLQRIQNGQISVDGM 266
            FG PWP+ NEGL Y D+V P  S S +TL++FYS  +K+SAP +GWLQRIQNGQI+VDG 
Sbjct: 12   FGEPWPQLNEGLLYNDVVSP--SDSKLTLIEFYSTKHKNSAPLQGWLQRIQNGQITVDGR 69

Query: 267  VVKNADTTLSPGSTLVYHRVPWKEPAAPYKIIILYEDEHLLVINKPAGLQVLPGGLFQQR 446
            VV + +  LS GS LVYHR+PWKEP  PY + + YED+ L+ +NKP+GLQVLPGGLFQQR
Sbjct: 70   VVNDPNIILSAGSELVYHRLPWKEPDVPYLLEVFYEDDDLIALNKPSGLQVLPGGLFQQR 129

Query: 447  TVLAQLQWKYTQSANANMFTDKIKHCSIACPAPVHRLGRGTSGILLCAKTKGAKSKLSLD 626
            TVL QLQW+   S  ++  + +  H     P PVHRLGRGTSGILLCAKTK AK+ ++  
Sbjct: 130  TVLKQLQWR--ASKQSSSLSSQASH-----PVPVHRLGRGTSGILLCAKTKLAKTCIAAY 182

Query: 627  FADGTLSMKNVRSTANDVTKKRQISKIYRASVQGIVDHNTIVISQPIGKIQYPGVASGLY 806
            FAD T S+ +  +T  +++ +R+I+KIYRA V GIVD + ++I QPIG ++YPGVA GLY
Sbjct: 183  FADKT-SVVDADNTVMELS-QRKITKIYRALVHGIVDEDKVIIKQPIGIVRYPGVAKGLY 240

Query: 807  VATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIGHPLVGDPLYVSGG 986
            VA+P+GK A S+V VL RD +RNCTLV+VEI SGR HQIRIH+A++GHPL+GDPLYV+GG
Sbjct: 241  VASPSGKPALSKVDVLERDVQRNCTLVQVEIQSGRPHQIRIHLAFLGHPLLGDPLYVAGG 300

Query: 987  KPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYQLHAYQVILQHPISNKAMKI 1166
            +P                  FA+DGGYER    +PGDCGY LHAYQ+ L HP +N+ +KI
Sbjct: 301  QP-------KSFDSEFADGTFAQDGGYERPVNPVPGDCGYYLHAYQLFLSHPTTNEVIKI 353

Query: 1167 VAPPPTTL 1190
             AP P+ L
Sbjct: 354  TAPLPSVL 361


>XP_019245847.1 PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Nicotiana
            attenuata]
          Length = 420

 Score =  415 bits (1066), Expect = e-140
 Identities = 216/389 (55%), Positives = 271/389 (69%), Gaps = 5/389 (1%)
 Frame = +3

Query: 39   EKKESMPSPSVVAPVEFGVPWPEYNEGLDYKDIVKPPSSSSCVTLLDFYSANYKSSAPRE 218
            +K E    PS      FG PWPE+N+GL Y DIV+P  +   +TL++FYS  YKSSAP +
Sbjct: 3    KKAELAAPPSAAETAYFGEPWPEFNDGLTYHDIVRPIDAG--LTLIEFYSRKYKSSAPLQ 60

Query: 219  GWLQRIQNGQISVDGMVVKNADTTLS-----PGSTLVYHRVPWKEPAAPYKIIILYEDEH 383
            GWLQRIQN QI+VDG VV   DT LS      G+ LVYHR+PW+EP APY + +L+ED++
Sbjct: 61   GWLQRIQNKQITVDGKVVTIPDTELSFWMSRAGTELVYHRLPWREPDAPYLLQVLFEDDY 120

Query: 384  LLVINKPAGLQVLPGGLFQQRTVLAQLQWKYTQSANANMFTDKIKHCSIACPAPVHRLGR 563
            L+ +NKP+GLQVLPGGLFQQRTVL QLQW      + +  T     C    P PVHRLGR
Sbjct: 121  LIALNKPSGLQVLPGGLFQQRTVLTQLQW------HVSKLTTSSSGCQKTHPVPVHRLGR 174

Query: 564  GTSGILLCAKTKGAKSKLSLDFADGTLSMKNVRSTANDVTKKRQISKIYRASVQGIVDHN 743
            GTSGILLCAKTK AKS+L+  FA+GT S+   + T ++  K R+ISKIYRA V G++D +
Sbjct: 175  GTSGILLCAKTKLAKSRLAAYFAEGT-SVVEDKYTNSECKKMRKISKIYRALVSGVIDMD 233

Query: 744  TIVISQPIGKIQYPGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQI 923
             +VI QPIG I+YPGVA GLYVA+P+GK A S V VL RD + N TLV+VEI SGR HQI
Sbjct: 234  EVVIKQPIGTIKYPGVAKGLYVASPSGKPALSSVRVLERDLENNSTLVQVEIQSGRPHQI 293

Query: 924  RIHMAYIGHPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCG 1103
            RIH+++IG PL+GDPLYVSGG+P                  F +DGGY+R    +PGDCG
Sbjct: 294  RIHLSFIGLPLIGDPLYVSGGQP-------KCFDPELMDESFEKDGGYQRPENPVPGDCG 346

Query: 1104 YQLHAYQVILQHPISNKAMKIVAPPPTTL 1190
            Y LHA+Q++L HPI+N+ +KI AP P+ L
Sbjct: 347  YNLHAHQIVLIHPITNELIKITAPLPSIL 375


>XP_010067286.1 PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Eucalyptus
            grandis]
          Length = 387

 Score =  413 bits (1062), Expect = e-140
 Identities = 211/385 (54%), Positives = 277/385 (71%), Gaps = 10/385 (2%)
 Frame = +3

Query: 66   SVVAPVEFGVPWPEYNEGLDYKDIVKPPSSSSCVTLLDFYSANYKSSAPREGWLQRIQNG 245
            +  AP  FGVPWPE N+G+ YKD+V  PSS    TL+ FYS+ Y +SAP +GWLQRIQNG
Sbjct: 2    TTAAPRGFGVPWPELNDGIFYKDVV--PSSDHETTLIQFYSSKYGNSAPVQGWLQRIQNG 59

Query: 246  Q----------ISVDGMVVKNADTTLSPGSTLVYHRVPWKEPAAPYKIIILYEDEHLLVI 395
            Q          I +DG VV + + ++S G  +VYHR+PWKEP APY + ILYED++++ +
Sbjct: 60   QVPLLQKNRTSIKIDGRVVTDPNESVSAGLEVVYHRLPWKEPDAPYFLGILYEDDNMIAL 119

Query: 396  NKPAGLQVLPGGLFQQRTVLAQLQWKYTQSANANMFTDKIKHCSIACPAPVHRLGRGTSG 575
            NKP+GLQVLPGGLFQQRTVL+QLQW+   S  + + + +        P PVHRLGRGTSG
Sbjct: 120  NKPSGLQVLPGGLFQQRTVLSQLQWQ--DSKQSTLLSSQEPQ-----PVPVHRLGRGTSG 172

Query: 576  ILLCAKTKGAKSKLSLDFADGTLSMKNVRSTANDVTKKRQISKIYRASVQGIVDHNTIVI 755
            ILLCAKTK AKS+LS+ FADGT  +   R+T  + +  R+ISKIYRA V G+VD + ++I
Sbjct: 173  ILLCAKTKIAKSRLSIYFADGTSLVGGKRNTTKEPSSVRKISKIYRALVNGLVDEDEVII 232

Query: 756  SQPIGKIQYPGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHM 935
            ++PIG I+YPGVA GLYVA+P+GK A S+V VL R+ + NC+LV+VEI SGR HQIRIH+
Sbjct: 233  TEPIGVIKYPGVAKGLYVASPSGKPALSKVKVLERNVQGNCSLVQVEIQSGRPHQIRIHL 292

Query: 936  AYIGHPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYQLH 1115
            ++IGHPL+GDPLYVSGGKP                  FA+DGGY R  +++PGDCGY LH
Sbjct: 293  SFIGHPLLGDPLYVSGGKP-------GCFDSQSVDEGFAQDGGYCRPQHAVPGDCGYFLH 345

Query: 1116 AYQVILQHPISNKAMKIVAPPPTTL 1190
            A+Q++L HP++++ +KI AP P+ L
Sbjct: 346  AHQLLLSHPVTDEVIKITAPLPSIL 370


>XP_009589062.1 PREDICTED: RNA pseudouridine synthase 5 isoform X6 [Nicotiana
            tomentosiformis]
          Length = 381

 Score =  412 bits (1058), Expect = e-139
 Identities = 212/385 (55%), Positives = 271/385 (70%)
 Frame = +3

Query: 36   LEKKESMPSPSVVAPVEFGVPWPEYNEGLDYKDIVKPPSSSSCVTLLDFYSANYKSSAPR 215
            + KK  + +P   A   FG PWPE+N+GL Y D+V+P  +   +TL++FYS  YKSSAP 
Sbjct: 1    MSKKAELAAPPSAA--YFGEPWPEFNDGLTYHDMVRPIDAG--LTLIEFYSRKYKSSAPL 56

Query: 216  EGWLQRIQNGQISVDGMVVKNADTTLSPGSTLVYHRVPWKEPAAPYKIIILYEDEHLLVI 395
            +GWLQRIQN QI+VD  VV   DT L  G+ LVYHR+PW+EP APY + +L+ED++L+ +
Sbjct: 57   QGWLQRIQNKQITVDSKVVTIPDTELRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIAL 116

Query: 396  NKPAGLQVLPGGLFQQRTVLAQLQWKYTQSANANMFTDKIKHCSIACPAPVHRLGRGTSG 575
            NKP+GLQVLPGGLFQQRTVL QLQW      + +  T     C    P PVHRLGRGTSG
Sbjct: 117  NKPSGLQVLPGGLFQQRTVLTQLQW------HVSKLTTSSSGCRKTHPVPVHRLGRGTSG 170

Query: 576  ILLCAKTKGAKSKLSLDFADGTLSMKNVRSTANDVTKKRQISKIYRASVQGIVDHNTIVI 755
            ILLCAKTK AKS+L+  FA+GT S+   + T ++  K R+ISKIYRA V G++D + ++I
Sbjct: 171  ILLCAKTKLAKSRLAAYFAEGT-SVVEDKYTNSECKKMRKISKIYRALVSGVIDMDEVLI 229

Query: 756  SQPIGKIQYPGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHM 935
             QPIG I+YPGVA GLYVA+P+GK A S V VL RD + N TLV+VEI SGR HQIRIH+
Sbjct: 230  KQPIGTIKYPGVAKGLYVASPSGKPALSSVHVLERDLENNSTLVQVEIQSGRPHQIRIHL 289

Query: 936  AYIGHPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYQLH 1115
            ++IG PL+GDPLYVSGG+P                  F +DGGY+R    +PGDCGY LH
Sbjct: 290  SFIGLPLIGDPLYVSGGQP-------KCFDPELMDESFEKDGGYQRPENPVPGDCGYNLH 342

Query: 1116 AYQVILQHPISNKAMKIVAPPPTTL 1190
            A+Q++L HPI+N+ +KI AP P+ L
Sbjct: 343  AHQIVLIHPITNELIKITAPLPSIL 367


>XP_004307403.1 PREDICTED: RNA pseudouridine synthase 5 [Fragaria vesca subsp. vesca]
          Length = 375

 Score =  411 bits (1056), Expect = e-139
 Identities = 208/379 (54%), Positives = 271/379 (71%), Gaps = 2/379 (0%)
 Frame = +3

Query: 60   SPSVVAPVEFGVPWPEYNEGLDYKDIVKPPSSSSCVTLLDFYSANYKSSAPREGWLQRIQ 239
            S S ++   FG+PWP+ N+GL Y D+VK  SS S +TL++FYS+ YKSSAP +GWLQRI+
Sbjct: 4    STSSLSTQTFGLPWPDLNDGLSYNDVVK--SSDSELTLIEFYSSKYKSSAPLQGWLQRIR 61

Query: 240  NGQISVDGMVVKNADTTLSPGSTLVYHRVPWKEPAAPYKIIILYEDEHLLVINKPAGLQV 419
            NGQI+VDG VV+++DT L  GS LVYHR+PW EP APY + +LYED+ ++ +NKP GLQV
Sbjct: 62   NGQITVDGEVVRDSDTILRVGSELVYHRLPWGEPDAPYLLEVLYEDDDMIALNKPGGLQV 121

Query: 420  LPGGLFQQRTVLAQLQWKYTQSANANMFTDKIKH--CSIACPAPVHRLGRGTSGILLCAK 593
            LPGGLFQQRTVL QL W+ +Q         K  H  C  +   PVHRLGRGTSGILLCAK
Sbjct: 122  LPGGLFQQRTVLTQLLWRESQ---------KFDHLACQKSHLVPVHRLGRGTSGILLCAK 172

Query: 594  TKGAKSKLSLDFADGTLSMKNVRSTANDVTKKRQISKIYRASVQGIVDHNTIVISQPIGK 773
            TK AK++L+  FADGT  + +  +T   +   R+I+KIYRA V GI+  + +++ QPIG 
Sbjct: 173  TKHAKTQLAAYFADGTSHIGDDSTTNTKLHTTRKITKIYRALVTGIICEDEVIVKQPIGT 232

Query: 774  IQYPGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIGHP 953
            ++YPGVA GLY+A+P GK A S+V VL RD ++N T+V+VEI SGR HQIRIH+++IGHP
Sbjct: 233  VRYPGVAKGLYIASPAGKPALSKVEVLDRDIQKNHTIVQVEIQSGRPHQIRIHLSFIGHP 292

Query: 954  LVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYQLHAYQVIL 1133
            L+GDPLYV+GG+P                  FA+DGG++R    +PGDCGY LHA+QV+L
Sbjct: 293  LLGDPLYVAGGQP-------KCLGSDLVDESFADDGGFKRPTKPVPGDCGYNLHAHQVVL 345

Query: 1134 QHPISNKAMKIVAPPPTTL 1190
             HP SN+ +KI AP P  L
Sbjct: 346  SHPSSNEVIKITAPLPLVL 364


>XP_017643285.1 PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Gossypium
            arboreum] KHG01532.1 hypothetical protein F383_21699
            [Gossypium arboreum]
          Length = 382

 Score =  411 bits (1056), Expect = e-139
 Identities = 207/363 (57%), Positives = 264/363 (72%)
 Frame = +3

Query: 87   FGVPWPEYNEGLDYKDIVKPPSSSSCVTLLDFYSANYKSSAPREGWLQRIQNGQISVDGM 266
            FG+PWPE NEGL Y D+V  P S S +TL+DFYS  YK+SAP +GWLQRIQNGQISVDG 
Sbjct: 12   FGIPWPELNEGLFYSDVV--PHSDSELTLIDFYSRKYKNSAPIQGWLQRIQNGQISVDGR 69

Query: 267  VVKNADTTLSPGSTLVYHRVPWKEPAAPYKIIILYEDEHLLVINKPAGLQVLPGGLFQQR 446
            VVK+ +T LS  S LVYHR+PWKEP  P+ + +LYED+ ++ +NKP+GLQVLPGGLFQQR
Sbjct: 70   VVKDPNTILSGDSVLVYHRLPWKEPDVPHLLEVLYEDDDMVALNKPSGLQVLPGGLFQQR 129

Query: 447  TVLAQLQWKYTQSANANMFTDKIKHCSIACPAPVHRLGRGTSGILLCAKTKGAKSKLSLD 626
            TVL QL W   +  N+ + + +        P PVHRLGRGTSGILLCAKTK AK++L+  
Sbjct: 130  TVLTQLCWS-VKKQNSTLNSQETH------PVPVHRLGRGTSGILLCAKTKVAKTRLAAY 182

Query: 627  FADGTLSMKNVRSTANDVTKKRQISKIYRASVQGIVDHNTIVISQPIGKIQYPGVASGLY 806
            FADGT  +    +   + +  R+ISKIYRA V GI+  + ++I QPIG ++YPGVA GLY
Sbjct: 183  FADGTSRVGATSNRKAERSGTRKISKIYRALVTGILVDDKVIIDQPIGIVRYPGVARGLY 242

Query: 807  VATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIGHPLVGDPLYVSGG 986
            VA+P+GK A S+V VL RD+K+NCTLV+VEI SGR HQIRIH+++IGHPL+GDPLY++GG
Sbjct: 243  VASPSGKPALSKVEVLERDEKQNCTLVQVEIESGRPHQIRIHLSFIGHPLLGDPLYIAGG 302

Query: 987  KPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYQLHAYQVILQHPISNKAMKI 1166
            +P                  FA+DGGY+R    +PGDCGY LHAYQ++L HP +N+ + I
Sbjct: 303  QP-------RCFDPELVDESFAQDGGYQRPTNPVPGDCGYYLHAYQLVLSHPTTNEMISI 355

Query: 1167 VAP 1175
             AP
Sbjct: 356  TAP 358


>XP_016495596.1 PREDICTED: RNA pseudouridine synthase 5 isoform X6 [Nicotiana
            tabacum]
          Length = 381

 Score =  409 bits (1052), Expect = e-138
 Identities = 211/385 (54%), Positives = 270/385 (70%)
 Frame = +3

Query: 36   LEKKESMPSPSVVAPVEFGVPWPEYNEGLDYKDIVKPPSSSSCVTLLDFYSANYKSSAPR 215
            + KK  + +P   A   FG PWPE+N+GL Y D+V+P  +   +TL++FYS  YKSSAP 
Sbjct: 1    MSKKAELAAPPSAA--YFGEPWPEFNDGLTYHDMVRPIDAG--LTLIEFYSRKYKSSAPL 56

Query: 216  EGWLQRIQNGQISVDGMVVKNADTTLSPGSTLVYHRVPWKEPAAPYKIIILYEDEHLLVI 395
            +GWLQRIQN QI+VD  VV   DT L  G+ LVYHR+PW+EP APY + +L+ED++L+ +
Sbjct: 57   QGWLQRIQNKQITVDSKVVTIPDTELRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIAL 116

Query: 396  NKPAGLQVLPGGLFQQRTVLAQLQWKYTQSANANMFTDKIKHCSIACPAPVHRLGRGTSG 575
            NKP+GLQVLPGGLFQQRTVL QLQW      + +  T     C    P PVHRLGRGTSG
Sbjct: 117  NKPSGLQVLPGGLFQQRTVLTQLQW------HVSKLTTSSSGCRKTHPVPVHRLGRGTSG 170

Query: 576  ILLCAKTKGAKSKLSLDFADGTLSMKNVRSTANDVTKKRQISKIYRASVQGIVDHNTIVI 755
            ILLCAKTK AKS+L+  FA+GT S+   + T ++  K R+ISKIYRA V G++D + ++I
Sbjct: 171  ILLCAKTKLAKSRLAAYFAEGT-SVVEDKYTNSECKKMRKISKIYRALVSGVIDMDEVLI 229

Query: 756  SQPIGKIQYPGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHM 935
             QPIG I+YPGVA GLYVA+P+GK A S V VL RD +   TLV+VEI SGR HQIRIH+
Sbjct: 230  KQPIGTIKYPGVAKGLYVASPSGKPALSSVHVLERDLENKSTLVQVEIQSGRPHQIRIHL 289

Query: 936  AYIGHPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYQLH 1115
            ++IG PL+GDPLYVSGG+P                  F +DGGY+R    +PGDCGY LH
Sbjct: 290  SFIGLPLIGDPLYVSGGQP-------KCFDPELMDESFEKDGGYQRPENPVPGDCGYNLH 342

Query: 1116 AYQVILQHPISNKAMKIVAPPPTTL 1190
            A+Q++L HPI+N+ +KI AP P+ L
Sbjct: 343  AHQIVLIHPITNELIKITAPLPSIL 367


>XP_009333717.1 PREDICTED: RNA pseudouridine synthase 5 isoform X2 [Pyrus x
            bretschneideri]
          Length = 386

 Score =  409 bits (1051), Expect = e-138
 Identities = 209/379 (55%), Positives = 269/379 (70%), Gaps = 2/379 (0%)
 Frame = +3

Query: 60   SPSVVAPVEFGVPWPEYNEGLDYKDIVKPPSSSSCVTLLDFYSANYKSSAPREGWLQRIQ 239
            S  V  P  FG+PWP+ N+GL Y D+V+  +S S +TL++FYS+ YK+SAP +GWLQRI+
Sbjct: 4    SSRVCQPQTFGLPWPDLNDGLFYNDVVR--ASDSELTLIEFYSSKYKNSAPLQGWLQRIR 61

Query: 240  NGQISVDGMVVKNADTTLSPGSTLVYHRVPWKEPAAPYKIIILYEDEHLLVINKPAGLQV 419
            +GQI+VD  VV++ DT L  GS L YHR+PW+EP APY + +LYED+ ++ +NKP+GLQV
Sbjct: 62   SGQITVDREVVRDPDTILRVGSKLTYHRLPWREPDAPYLLEVLYEDDDMIALNKPSGLQV 121

Query: 420  LPGGLFQQRTVLAQLQWKYTQSANANMFTDKIKH--CSIACPAPVHRLGRGTSGILLCAK 593
            LP GLFQQRTVL QL W+ TQ         KI H  C    P PVHRLGRGTSGILLCAK
Sbjct: 122  LPQGLFQQRTVLTQLLWRATQ---------KISHLSCQQPHPVPVHRLGRGTSGILLCAK 172

Query: 594  TKGAKSKLSLDFADGTLSMKNVRSTANDVTKKRQISKIYRASVQGIVDHNTIVISQPIGK 773
            TK AK++L+  FADGT ++ +  +   +   +R+ISKIYRA V GIV  + +++ QPIG 
Sbjct: 173  TKHAKTQLAAYFADGTSNIGDGSNADVEPRTERKISKIYRALVTGIVCEDKVIVKQPIGM 232

Query: 774  IQYPGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIGHP 953
            ++YPGVA GLYVA+PTGK A S+V VL R+  +N TLV+VEI SGR HQIRIH++YIGHP
Sbjct: 233  VRYPGVAKGLYVASPTGKPALSKVEVLEREIHKNQTLVQVEIQSGRPHQIRIHLSYIGHP 292

Query: 954  LVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYQLHAYQVIL 1133
            L+GDPLYV GG+P                  FA+DGG+ R    +PGDCGY LHA+QVIL
Sbjct: 293  LLGDPLYVPGGQP-------KCSDFDLVDESFADDGGFRRPTNPVPGDCGYNLHAHQVIL 345

Query: 1134 QHPISNKAMKIVAPPPTTL 1190
             HP SN+ +K++AP P  L
Sbjct: 346  SHPASNEVIKVIAPLPPFL 364


>XP_006485879.2 PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Citrus sinensis]
          Length = 389

 Score =  409 bits (1051), Expect = e-138
 Identities = 211/369 (57%), Positives = 269/369 (72%), Gaps = 1/369 (0%)
 Frame = +3

Query: 87   FGVPWPEYNEGLDYKDIVKPPSSSSCVTLLDFYSANYKSSAPREGWLQRIQNGQISVDGM 266
            FG PWP+ NEGL Y D+V P  S S +TL++FYS  +K+SAP +GWLQRIQNGQI+VDG 
Sbjct: 12   FGEPWPQLNEGLLYNDVVSP--SDSKLTLIEFYSTKHKNSAPLQGWLQRIQNGQITVDGR 69

Query: 267  VVKNADTTLSPGSTLVYHRVPWKEPAAPYKIIILYEDEHLLVINKPAGLQVLPGGLFQQR 446
            VV + +  LS GS LVYHR+PWKEP  PY + + YED+ L+ +NKP+GLQVLPGGLFQQR
Sbjct: 70   VVNDPNIILSAGSELVYHRLPWKEPDVPYLLEVFYEDDDLIALNKPSGLQVLPGGLFQQR 129

Query: 447  TVLAQLQWKYTQSANANMFTDKIKHCSIACPAPVHRLGRGTSGILLCAKTKGAKSKLSLD 626
            TVL QLQW+   S  ++  + +  H     P PVHRLGRGTSGILLCAKTK AK+ ++  
Sbjct: 130  TVLKQLQWR--ASKQSSSLSSQASH-----PVPVHRLGRGTSGILLCAKTKLAKTCIAAY 182

Query: 627  FADGTLSMKNVRSTANDVTKKRQISKIYRASVQGIVDHNTIVISQPIGKIQYPGVASGLY 806
            FAD T S+ +  +T  +++ +R+I+KIYRA V GIVD + ++I QPIG ++YPGVA GLY
Sbjct: 183  FADKT-SVVDADNTVMELS-QRKITKIYRALVHGIVDEDKVIIKQPIGIVRYPGVAKGLY 240

Query: 807  VATPTGKQAESQVVVLYRDKKRNCTLV-EVEIYSGRAHQIRIHMAYIGHPLVGDPLYVSG 983
            VA+P+GK A S+V VL RD +RNCTLV +VEI SGR HQIRIH+A++GHPL+GDPLYV+G
Sbjct: 241  VASPSGKPALSKVDVLERDVQRNCTLVQQVEIQSGRPHQIRIHLAFLGHPLLGDPLYVAG 300

Query: 984  GKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYQLHAYQVILQHPISNKAMK 1163
            G+P                  FA+DGGYER    +PGDCGY LHAYQ+ L HP +N+ +K
Sbjct: 301  GQP-------KSFDSEFADGTFAQDGGYERPVNPVPGDCGYYLHAYQLFLSHPTTNEVIK 353

Query: 1164 IVAPPPTTL 1190
            I AP P+ L
Sbjct: 354  ITAPLPSVL 362


>KNA10992.1 hypothetical protein SOVF_139290 [Spinacia oleracea]
          Length = 393

 Score =  409 bits (1051), Expect = e-138
 Identities = 202/367 (55%), Positives = 268/367 (73%)
 Frame = +3

Query: 90   GVPWPEYNEGLDYKDIVKPPSSSSCVTLLDFYSANYKSSAPREGWLQRIQNGQISVDGMV 269
            G+PWPE+N+GL Y D+V P  S+S V+L+ FYS+N+ SSAP +GWLQRI NGQI++DG  
Sbjct: 37   GIPWPEFNDGLRYNDVVSP--SNSGVSLIQFYSSNHPSSAPLQGWLQRIHNGQITIDGDT 94

Query: 270  VKNADTTLSPGSTLVYHRVPWKEPAAPYKIIILYEDEHLLVINKPAGLQVLPGGLFQQRT 449
            V + +  L  GS LVYHR+PW EP  P+ + +LYED+ ++V+NKP+GLQVLPGGLFQQRT
Sbjct: 95   VTDPNIVLRVGSKLVYHRLPWSEPETPFLLEVLYEDDDMIVLNKPSGLQVLPGGLFQQRT 154

Query: 450  VLAQLQWKYTQSANANMFTDKIKHCSIACPAPVHRLGRGTSGILLCAKTKGAKSKLSLDF 629
            VL QL+W   ++ N+   T    H     P PVHRLGRGTSG+LLCAKTK AK++L+  F
Sbjct: 155  VLTQLKWHVNKNENS---TPSQLH-----PVPVHRLGRGTSGVLLCAKTKSAKARLAAYF 206

Query: 630  ADGTLSMKNVRSTANDVTKKRQISKIYRASVQGIVDHNTIVISQPIGKIQYPGVASGLYV 809
            ADGT  ++  R T +++ ++R+I+KIYRA V+GI+D N ++I++PIG ++YPGVA GLYV
Sbjct: 207  ADGTSLVRGKRETDSEIGEERRITKIYRALVKGIIDTNEVLINKPIGIMRYPGVAKGLYV 266

Query: 810  ATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIGHPLVGDPLYVSGGK 989
            A P+GK A S+V VL RD ++N TLV+V+I SGR HQIRIH++ IG+PL+GDPLYV+GG+
Sbjct: 267  ALPSGKPALSKVRVLERDMEKNQTLVQVQIQSGRPHQIRIHLSLIGYPLLGDPLYVAGGQ 326

Query: 990  PLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYQLHAYQVILQHPISNKAMKIV 1169
            P                  FAEDGGY+R    +PGDCGY LHA++V L HP +N  MKI+
Sbjct: 327  P-------ECFDSELVEEEFAEDGGYQRPTKPVPGDCGYHLHAHEVTLSHPTTNAVMKII 379

Query: 1170 APPPTTL 1190
            AP P  L
Sbjct: 380  APLPPML 386


>XP_010317224.1 PREDICTED: RNA pseudouridine synthase 5 isoform X2 [Solanum
            lycopersicum]
          Length = 393

 Score =  409 bits (1050), Expect = e-138
 Identities = 214/391 (54%), Positives = 268/391 (68%)
 Frame = +3

Query: 18   DCKMEELEKKESMPSPSVVAPVEFGVPWPEYNEGLDYKDIVKPPSSSSCVTLLDFYSANY 197
            D    EL   E     +V A   FGVPWP+ NEGL Y DIV+P  +   +TL++FY   Y
Sbjct: 7    DIPYSELRMSEKAELAAVRA--YFGVPWPQRNEGLSYHDIVRPTDAG--LTLIEFYFRKY 62

Query: 198  KSSAPREGWLQRIQNGQISVDGMVVKNADTTLSPGSTLVYHRVPWKEPAAPYKIIILYED 377
            K+SAP +GWLQRIQN QI++DG VV   DT L  G+ LVYHR+PW+EP APY + +L+ED
Sbjct: 63   KNSAPLQGWLQRIQNKQITIDGKVVILPDTELRAGAELVYHRLPWREPDAPYLLEVLFED 122

Query: 378  EHLLVINKPAGLQVLPGGLFQQRTVLAQLQWKYTQSANANMFTDKIKHCSIACPAPVHRL 557
            ++L+V+NKP+GLQVLPGGL+QQRTVL QLQW      +A   T     C    P PVHRL
Sbjct: 123  DYLIVVNKPSGLQVLPGGLYQQRTVLTQLQW------HACKLTTTSSGCQKTHPVPVHRL 176

Query: 558  GRGTSGILLCAKTKGAKSKLSLDFADGTLSMKNVRSTANDVTKKRQISKIYRASVQGIVD 737
            GRGTSGILLCAKTK  KS+L+  FA+GT S+   + T ++    R+I KIYRA V G++D
Sbjct: 177  GRGTSGILLCAKTKLCKSRLAAYFAEGT-SVVEEKCTNSECNTMRKICKIYRALVSGVMD 235

Query: 738  HNTIVISQPIGKIQYPGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAH 917
             +  VI QPIG I+YPGVA GLYVA+P+GK A S V VL RD + NCTLV+VEI SGR H
Sbjct: 236  MDEAVIKQPIGTIKYPGVAKGLYVASPSGKPALSSVRVLERDSESNCTLVQVEIQSGRPH 295

Query: 918  QIRIHMAYIGHPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGD 1097
            QIRIH+++IG+PL+GDPLYVSGG+P                  F +DGGY+R    +PGD
Sbjct: 296  QIRIHLSFIGYPLIGDPLYVSGGQP-------KCFHPELLDESFEKDGGYQRPENPVPGD 348

Query: 1098 CGYQLHAYQVILQHPISNKAMKIVAPPPTTL 1190
            CGY LHA+Q+ L HPI+N+ +KI AP P  L
Sbjct: 349  CGYNLHAHQIGLIHPITNELIKITAPLPAIL 379


>OIT03527.1 rna uridine synthase 5 [Nicotiana attenuata]
          Length = 384

 Score =  408 bits (1049), Expect = e-138
 Identities = 209/372 (56%), Positives = 262/372 (70%)
 Frame = +3

Query: 39   EKKESMPSPSVVAPVEFGVPWPEYNEGLDYKDIVKPPSSSSCVTLLDFYSANYKSSAPRE 218
            +K E    PS      FG PWPE+N+GL Y DIV+P  +   +TL++FYS  YKSSAP +
Sbjct: 3    KKAELAAPPSAAETAYFGEPWPEFNDGLTYHDIVRPIDAG--LTLIEFYSRKYKSSAPLQ 60

Query: 219  GWLQRIQNGQISVDGMVVKNADTTLSPGSTLVYHRVPWKEPAAPYKIIILYEDEHLLVIN 398
            GWLQRIQN QI+VDG VV   DT L  G+ LVYHR+PW+EP APY + +L+ED++L+ +N
Sbjct: 61   GWLQRIQNKQITVDGKVVTIPDTELRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIALN 120

Query: 399  KPAGLQVLPGGLFQQRTVLAQLQWKYTQSANANMFTDKIKHCSIACPAPVHRLGRGTSGI 578
            KP+GLQVLPGGLFQQRTVL QLQW      + +  T     C    P PVHRLGRGTSGI
Sbjct: 121  KPSGLQVLPGGLFQQRTVLTQLQW------HVSKLTTSSSGCQKTHPVPVHRLGRGTSGI 174

Query: 579  LLCAKTKGAKSKLSLDFADGTLSMKNVRSTANDVTKKRQISKIYRASVQGIVDHNTIVIS 758
            LLCAKTK AKS+L+  FA+GT S+   + T ++  K R+ISKIYRA V G++D + +VI 
Sbjct: 175  LLCAKTKLAKSRLAAYFAEGT-SVVEDKYTNSECKKMRKISKIYRALVSGVIDMDEVVIK 233

Query: 759  QPIGKIQYPGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMA 938
            QPIG I+YPGVA GLYVA+P+GK A S V VL RD + N TLV+VEI SGR HQIRIH++
Sbjct: 234  QPIGTIKYPGVAKGLYVASPSGKPALSSVRVLERDLENNSTLVQVEIQSGRPHQIRIHLS 293

Query: 939  YIGHPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYQLHA 1118
            +IG PL+GDPLYVSGG+P                  F +DGGY+R    +PGDCGY LHA
Sbjct: 294  FIGLPLIGDPLYVSGGQP-------KCFDPELMDESFEKDGGYQRPENPVPGDCGYNLHA 346

Query: 1119 YQVILQHPISNK 1154
            +Q++L HPI+N+
Sbjct: 347  HQIVLIHPITNE 358


>OAY45924.1 hypothetical protein MANES_07G103500 [Manihot esculenta]
          Length = 385

 Score =  408 bits (1049), Expect = e-138
 Identities = 206/372 (55%), Positives = 270/372 (72%)
 Frame = +3

Query: 75   APVEFGVPWPEYNEGLDYKDIVKPPSSSSCVTLLDFYSANYKSSAPREGWLQRIQNGQIS 254
            +P  FG+PWP+ N+GL Y DIV   SS S +TL++FYS+ Y +SAP  GWLQRIQNGQI+
Sbjct: 15   SPSFFGLPWPDLNDGLSYSDIVS--SSDSELTLIEFYSSKYNNSAPLHGWLQRIQNGQIT 72

Query: 255  VDGMVVKNADTTLSPGSTLVYHRVPWKEPAAPYKIIILYEDEHLLVINKPAGLQVLPGGL 434
            +DG++VK  +  L  GS LVYHR+PW+EP APY + ILYED  L+ +NKP+GLQVLPGGL
Sbjct: 73   IDGVIVKEPNIILRGGSELVYHRLPWREPDAPYMLQILYEDADLIALNKPSGLQVLPGGL 132

Query: 435  FQQRTVLAQLQWKYTQSANANMFTDKIKHCSIACPAPVHRLGRGTSGILLCAKTKGAKSK 614
            FQQRTVL QLQW + +   +++ + + +H     P PVHRLGRGTSGILLCAK+K AK+ 
Sbjct: 133  FQQRTVLTQLQW-WAKKKTSSLLSQE-QH-----PVPVHRLGRGTSGILLCAKSKLAKTH 185

Query: 615  LSLDFADGTLSMKNVRSTANDVTKKRQISKIYRASVQGIVDHNTIVISQPIGKIQYPGVA 794
            L+  FADGT  + ++ +T+  + K R+ISKIYRA V GI++ + ++I QPIG ++YPGVA
Sbjct: 186  LAAYFADGTSRVGDIGNTSTKLVKGRKISKIYRALVDGILNQDKVIIKQPIGTVRYPGVA 245

Query: 795  SGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIGHPLVGDPLY 974
             GLYVA+P+GK A S+V VL RD + N TLV+VEI SGR HQIRIH+++IGHPL+GDPLY
Sbjct: 246  KGLYVASPSGKPALSKVEVLERDVQGNHTLVQVEIESGRPHQIRIHLSFIGHPLLGDPLY 305

Query: 975  VSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYQLHAYQVILQHPISNK 1154
            V GG+P                  FA+DGGY+R    +PGDCGY LHA+Q+ L HP +N+
Sbjct: 306  VVGGQP-------KSFESEYVDESFAQDGGYQRPTKPVPGDCGYYLHAHQLFLLHPTTNE 358

Query: 1155 AMKIVAPPPTTL 1190
             ++I AP P  L
Sbjct: 359  VIRITAPLPPIL 370


>XP_010317225.1 PREDICTED: RNA pseudouridine synthase 5 isoform X3 [Solanum
            lycopersicum] XP_010317226.1 PREDICTED: RNA pseudouridine
            synthase 5 isoform X3 [Solanum lycopersicum]
            XP_010317227.1 PREDICTED: RNA pseudouridine synthase 5
            isoform X3 [Solanum lycopersicum]
          Length = 379

 Score =  408 bits (1048), Expect = e-138
 Identities = 208/368 (56%), Positives = 261/368 (70%)
 Frame = +3

Query: 87   FGVPWPEYNEGLDYKDIVKPPSSSSCVTLLDFYSANYKSSAPREGWLQRIQNGQISVDGM 266
            FGVPWP+ NEGL Y DIV+P  +   +TL++FY   YK+SAP +GWLQRIQN QI++DG 
Sbjct: 14   FGVPWPQRNEGLSYHDIVRPTDAG--LTLIEFYFRKYKNSAPLQGWLQRIQNKQITIDGK 71

Query: 267  VVKNADTTLSPGSTLVYHRVPWKEPAAPYKIIILYEDEHLLVINKPAGLQVLPGGLFQQR 446
            VV   DT L  G+ LVYHR+PW+EP APY + +L+ED++L+V+NKP+GLQVLPGGL+QQR
Sbjct: 72   VVILPDTELRAGAELVYHRLPWREPDAPYLLEVLFEDDYLIVVNKPSGLQVLPGGLYQQR 131

Query: 447  TVLAQLQWKYTQSANANMFTDKIKHCSIACPAPVHRLGRGTSGILLCAKTKGAKSKLSLD 626
            TVL QLQW      +A   T     C    P PVHRLGRGTSGILLCAKTK  KS+L+  
Sbjct: 132  TVLTQLQW------HACKLTTTSSGCQKTHPVPVHRLGRGTSGILLCAKTKLCKSRLAAY 185

Query: 627  FADGTLSMKNVRSTANDVTKKRQISKIYRASVQGIVDHNTIVISQPIGKIQYPGVASGLY 806
            FA+GT S+   + T ++    R+I KIYRA V G++D +  VI QPIG I+YPGVA GLY
Sbjct: 186  FAEGT-SVVEEKCTNSECNTMRKICKIYRALVSGVMDMDEAVIKQPIGTIKYPGVAKGLY 244

Query: 807  VATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQIRIHMAYIGHPLVGDPLYVSGG 986
            VA+P+GK A S V VL RD + NCTLV+VEI SGR HQIRIH+++IG+PL+GDPLYVSGG
Sbjct: 245  VASPSGKPALSSVRVLERDSESNCTLVQVEIQSGRPHQIRIHLSFIGYPLIGDPLYVSGG 304

Query: 987  KPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDCGYQLHAYQVILQHPISNKAMKI 1166
            +P                  F +DGGY+R    +PGDCGY LHA+Q+ L HPI+N+ +KI
Sbjct: 305  QP-------KCFHPELLDESFEKDGGYQRPENPVPGDCGYNLHAHQIGLIHPITNELIKI 357

Query: 1167 VAPPPTTL 1190
             AP P  L
Sbjct: 358  TAPLPAIL 365


>XP_004233537.1 PREDICTED: RNA pseudouridine synthase 5 isoform X1 [Solanum
            lycopersicum]
          Length = 402

 Score =  409 bits (1050), Expect = e-138
 Identities = 214/391 (54%), Positives = 268/391 (68%)
 Frame = +3

Query: 18   DCKMEELEKKESMPSPSVVAPVEFGVPWPEYNEGLDYKDIVKPPSSSSCVTLLDFYSANY 197
            D    EL   E     +V A   FGVPWP+ NEGL Y DIV+P  +   +TL++FY   Y
Sbjct: 16   DIPYSELRMSEKAELAAVRA--YFGVPWPQRNEGLSYHDIVRPTDAG--LTLIEFYFRKY 71

Query: 198  KSSAPREGWLQRIQNGQISVDGMVVKNADTTLSPGSTLVYHRVPWKEPAAPYKIIILYED 377
            K+SAP +GWLQRIQN QI++DG VV   DT L  G+ LVYHR+PW+EP APY + +L+ED
Sbjct: 72   KNSAPLQGWLQRIQNKQITIDGKVVILPDTELRAGAELVYHRLPWREPDAPYLLEVLFED 131

Query: 378  EHLLVINKPAGLQVLPGGLFQQRTVLAQLQWKYTQSANANMFTDKIKHCSIACPAPVHRL 557
            ++L+V+NKP+GLQVLPGGL+QQRTVL QLQW      +A   T     C    P PVHRL
Sbjct: 132  DYLIVVNKPSGLQVLPGGLYQQRTVLTQLQW------HACKLTTTSSGCQKTHPVPVHRL 185

Query: 558  GRGTSGILLCAKTKGAKSKLSLDFADGTLSMKNVRSTANDVTKKRQISKIYRASVQGIVD 737
            GRGTSGILLCAKTK  KS+L+  FA+GT S+   + T ++    R+I KIYRA V G++D
Sbjct: 186  GRGTSGILLCAKTKLCKSRLAAYFAEGT-SVVEEKCTNSECNTMRKICKIYRALVSGVMD 244

Query: 738  HNTIVISQPIGKIQYPGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAH 917
             +  VI QPIG I+YPGVA GLYVA+P+GK A S V VL RD + NCTLV+VEI SGR H
Sbjct: 245  MDEAVIKQPIGTIKYPGVAKGLYVASPSGKPALSSVRVLERDSESNCTLVQVEIQSGRPH 304

Query: 918  QIRIHMAYIGHPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGD 1097
            QIRIH+++IG+PL+GDPLYVSGG+P                  F +DGGY+R    +PGD
Sbjct: 305  QIRIHLSFIGYPLIGDPLYVSGGQP-------KCFHPELLDESFEKDGGYQRPENPVPGD 357

Query: 1098 CGYQLHAYQVILQHPISNKAMKIVAPPPTTL 1190
            CGY LHA+Q+ L HPI+N+ +KI AP P  L
Sbjct: 358  CGYNLHAHQIGLIHPITNELIKITAPLPAIL 388


>XP_009589060.1 PREDICTED: RNA pseudouridine synthase 5 isoform X5 [Nicotiana
            tomentosiformis]
          Length = 386

 Score =  407 bits (1047), Expect = e-138
 Identities = 213/390 (54%), Positives = 272/390 (69%), Gaps = 5/390 (1%)
 Frame = +3

Query: 36   LEKKESMPSPSVVAPVEFGVPWPEYNEGLDYKDIVKPPSSSSCVTLLDFYSANYKSSAPR 215
            + KK  + +P   A   FG PWPE+N+GL Y D+V+P  +   +TL++FYS  YKSSAP 
Sbjct: 1    MSKKAELAAPPSAA--YFGEPWPEFNDGLTYHDMVRPIDAG--LTLIEFYSRKYKSSAPL 56

Query: 216  EGWLQRIQNGQISVDGMVVKNADTTLS-----PGSTLVYHRVPWKEPAAPYKIIILYEDE 380
            +GWLQRIQN QI+VD  VV   DT LS      G+ LVYHR+PW+EP APY + +L+ED+
Sbjct: 57   QGWLQRIQNKQITVDSKVVTIPDTELSFWMSRAGTELVYHRLPWREPDAPYLLQVLFEDD 116

Query: 381  HLLVINKPAGLQVLPGGLFQQRTVLAQLQWKYTQSANANMFTDKIKHCSIACPAPVHRLG 560
            +L+ +NKP+GLQVLPGGLFQQRTVL QLQW      + +  T     C    P PVHRLG
Sbjct: 117  YLIALNKPSGLQVLPGGLFQQRTVLTQLQW------HVSKLTTSSSGCRKTHPVPVHRLG 170

Query: 561  RGTSGILLCAKTKGAKSKLSLDFADGTLSMKNVRSTANDVTKKRQISKIYRASVQGIVDH 740
            RGTSGILLCAKTK AKS+L+  FA+GT S+   + T ++  K R+ISKIYRA V G++D 
Sbjct: 171  RGTSGILLCAKTKLAKSRLAAYFAEGT-SVVEDKYTNSECKKMRKISKIYRALVSGVIDM 229

Query: 741  NTIVISQPIGKIQYPGVASGLYVATPTGKQAESQVVVLYRDKKRNCTLVEVEIYSGRAHQ 920
            + ++I QPIG I+YPGVA GLYVA+P+GK A S V VL RD + N TLV+VEI SGR HQ
Sbjct: 230  DEVLIKQPIGTIKYPGVAKGLYVASPSGKPALSSVHVLERDLENNSTLVQVEIQSGRPHQ 289

Query: 921  IRIHMAYIGHPLVGDPLYVSGGKPLXXXXXXXXXXXXXXXXXFAEDGGYERSPYSMPGDC 1100
            IRIH+++IG PL+GDPLYVSGG+P                  F +DGGY+R    +PGDC
Sbjct: 290  IRIHLSFIGLPLIGDPLYVSGGQP-------KCFDPELMDESFEKDGGYQRPENPVPGDC 342

Query: 1101 GYQLHAYQVILQHPISNKAMKIVAPPPTTL 1190
            GY LHA+Q++L HPI+N+ +KI AP P+ L
Sbjct: 343  GYNLHAHQIVLIHPITNELIKITAPLPSIL 372