BLASTX nr result
ID: Ephedra29_contig00013214
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00013214
(297 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KUM46798.1 hypothetical protein ABT39_MTgene6253 (mitochondrion)... 89 9e-21
GAV73510.1 zf-CCHC domain-containing protein/UBN2_2 domain-conta... 89 4e-19
KYP45634.1 Retrovirus-related Pol polyprotein from transposon TN... 83 5e-19
KHN26496.1 Retrovirus-related Pol polyprotein from transposon TN... 85 2e-18
KHN15555.1 Retrovirus-related Pol polyprotein from transposon TN... 85 2e-18
ACL97384.1 Gag-Pol polyprotein [Medicago truncatula] 87 5e-18
ACL97385.1 Gag-Pol polyprotein [Medicago truncatula] 87 5e-18
ACL97383.1 Gag-Pol polyprotein [Medicago truncatula] 87 5e-18
KZV26548.1 hypothetical protein F511_35882 [Dorcoceras hygrometr... 84 6e-18
BAD34493.1 Gag-Pol [Ipomoea batatas] 87 7e-18
KOM49095.1 hypothetical protein LR48_Vigan07g279900 [Vigna angul... 85 8e-18
KHN45809.1 Retrovirus-related Pol polyprotein from transposon TN... 82 1e-17
KYP32730.1 Retrovirus-related Pol polyprotein from transposon TN... 82 1e-17
KHN28193.1 Retrovirus-related Pol polyprotein from transposon TN... 82 2e-17
KHN08937.1 Retrovirus-related Pol polyprotein from transposon TN... 82 2e-17
KYP53220.1 Retrovirus-related Pol polyprotein from transposon TN... 82 3e-17
KYP56907.1 Retrovirus-related Pol polyprotein from transposon TN... 80 3e-17
KNA08435.1 hypothetical protein SOVF_162690, partial [Spinacia o... 83 4e-17
ACL97386.1 Gag-Pol polyprotein [Medicago truncatula] 85 4e-17
KYP44430.1 Retrovirus-related Pol polyprotein from transposon TN... 79 5e-17
>KUM46798.1 hypothetical protein ABT39_MTgene6253 (mitochondrion) [Picea
glauca]
Length = 116
Score = 88.6 bits (218), Expect = 9e-21
Identities = 37/72 (51%), Positives = 59/72 (81%)
Frame = -3
Query: 295 KTLYESKSFSNKIFLQRQLYNLRMREGSSLQDHLNDFNTLVSKLAAVEVKIDDEEKAALL 116
++LY+SKS N+I L+ +LY+L+M+EG+ + +HLN FN ++S+L ++ VK+DDE+KA L
Sbjct: 43 ESLYQSKSLLNRILLKNRLYSLKMKEGAKVSEHLNTFNDILSQLESIGVKMDDEDKAVTL 102
Query: 115 LCTMPDSWDQLI 80
LCT+PDS+D L+
Sbjct: 103 LCTLPDSYDNLV 114
>GAV73510.1 zf-CCHC domain-containing protein/UBN2_2 domain-containing protein,
partial [Cephalotus follicularis]
Length = 301
Score = 88.6 bits (218), Expect = 4e-19
Identities = 40/98 (40%), Positives = 68/98 (69%), Gaps = 1/98 (1%)
Frame = -3
Query: 295 KTLYESKSFSNKIFLQRQLYNLRMREGSSLQDHLNDFNTLVSKLAAVEVKIDDEEKAALL 116
++LY+SKS NK+FL+++LYNLRM++G + +HL++FNT++ ++ ++ V + +++KA L
Sbjct: 81 ESLYQSKSLVNKLFLRKKLYNLRMKDGDNFSNHLHEFNTIIGQMLSIGVDVKEDDKAITL 140
Query: 115 LCTMPDSWDQLIM-XXXXXXXXXXXTIVGSLLMEESRR 5
L ++PDSWD LI+ +V +LL EE RR
Sbjct: 141 LSSLPDSWDNLIVAIGSGTTTLCFENVVAALLSEEMRR 178
>KYP45634.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 66
Score = 82.8 bits (203), Expect = 5e-19
Identities = 37/66 (56%), Positives = 51/66 (77%)
Frame = -3
Query: 289 LYESKSFSNKIFLQRQLYNLRMREGSSLQDHLNDFNTLVSKLAAVEVKIDDEEKAALLLC 110
+YE S SNK+FL RQL N +MREG S+ DH+N+FN+L+S+L V++K DDE +A LLL
Sbjct: 1 MYEKPSASNKVFLIRQLVNTKMREGVSVTDHVNEFNSLLSRLVLVDIKFDDEVQALLLLS 60
Query: 109 TMPDSW 92
+ PD+W
Sbjct: 61 SFPDNW 66
>KHN26496.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 183
Score = 84.7 bits (208), Expect = 2e-18
Identities = 34/66 (51%), Positives = 55/66 (83%)
Frame = -3
Query: 289 LYESKSFSNKIFLQRQLYNLRMREGSSLQDHLNDFNTLVSKLAAVEVKIDDEEKAALLLC 110
+YE S +NK++L R+L+NL+MREG S+ DH+N+FNT++++L +V++K +DE KA +LL
Sbjct: 90 MYEKPSAANKVYLMRRLFNLKMREGISVTDHINEFNTILAQLESVQIKFEDEVKALILLS 149
Query: 109 TMPDSW 92
++PDSW
Sbjct: 150 SLPDSW 155
>KHN15555.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 183
Score = 84.7 bits (208), Expect = 2e-18
Identities = 34/66 (51%), Positives = 55/66 (83%)
Frame = -3
Query: 289 LYESKSFSNKIFLQRQLYNLRMREGSSLQDHLNDFNTLVSKLAAVEVKIDDEEKAALLLC 110
+YE S +NK++L R+L+NL+MREG S+ DH+N+FNT++++L +V++K +DE KA +LL
Sbjct: 90 MYEKPSAANKVYLMRRLFNLKMREGISVTDHINEFNTILAQLESVQIKFEDEVKALILLS 149
Query: 109 TMPDSW 92
++PDSW
Sbjct: 150 SLPDSW 155
>ACL97384.1 Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 87.4 bits (215), Expect = 5e-18
Identities = 47/99 (47%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
Frame = -3
Query: 289 LYESKSFSNKIFLQRQLYNLRMREGSSLQDHLNDFNTLVSKLAAVEVKIDDEEKAALLLC 110
LYE KS N+IFL+R+LY LRM E +S+ DH+N NTL S+L A + KI + E+A LLL
Sbjct: 86 LYEVKSLHNRIFLKRRLYTLRMGESTSVTDHINTLNTLFSQLTASDFKIAENERAELLLQ 145
Query: 109 TMPDSWDQLIM---XXXXXXXXXXXTIVGSLLMEESRRR 2
++PDS+DQLI+ + G++L EESRR+
Sbjct: 146 SLPDSYDQLIINITNNNIADTLHFDDVAGAILEEESRRK 184
>ACL97385.1 Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 87.4 bits (215), Expect = 5e-18
Identities = 47/99 (47%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
Frame = -3
Query: 289 LYESKSFSNKIFLQRQLYNLRMREGSSLQDHLNDFNTLVSKLAAVEVKIDDEEKAALLLC 110
LYE KS N+IFL+R+LY LRM E +S+ DH+N NTL S+L A + KI + E+A LLL
Sbjct: 86 LYEVKSLHNRIFLKRRLYTLRMGESTSVTDHINTLNTLFSQLTASDFKIAENERAELLLQ 145
Query: 109 TMPDSWDQLIM---XXXXXXXXXXXTIVGSLLMEESRRR 2
++PDS+DQLI+ + G++L EESRR+
Sbjct: 146 SLPDSYDQLIINITNNNIADTLHFDDVAGAILEEESRRK 184
>ACL97383.1 Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 87.4 bits (215), Expect = 5e-18
Identities = 47/99 (47%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
Frame = -3
Query: 289 LYESKSFSNKIFLQRQLYNLRMREGSSLQDHLNDFNTLVSKLAAVEVKIDDEEKAALLLC 110
LYE KS N+IFL+R+LY LRM E +S+ DH+N NTL S+L A + KI + E+A LLL
Sbjct: 86 LYEVKSLHNRIFLKRRLYTLRMGESTSVTDHINTLNTLFSQLTASDFKIAENERAELLLQ 145
Query: 109 TMPDSWDQLIM---XXXXXXXXXXXTIVGSLLMEESRRR 2
++PDS+DQLI+ + G++L EESRR+
Sbjct: 146 SLPDSYDQLIINITNNNITDTLHFDDVAGAILEEESRRK 184
>KZV26548.1 hypothetical protein F511_35882 [Dorcoceras hygrometricum]
Length = 197
Score = 83.6 bits (205), Expect = 6e-18
Identities = 44/99 (44%), Positives = 66/99 (66%), Gaps = 3/99 (3%)
Frame = -3
Query: 289 LYESKSFSNKIFLQRQLYNLRMREGSSLQDHLNDFNTLVSKLAAVEVKIDDEEKAALLLC 110
+YE KS NKIFL+R+LY LRM E SS+ DH+N NTL ++L ++ I+++E+A LLL
Sbjct: 37 MYEVKSLRNKIFLKRKLYTLRMAESSSMTDHINTLNTLFAQLISMGYIIEEKERAELLLQ 96
Query: 109 TMPDSWDQLIM---XXXXXXXXXXXTIVGSLLMEESRRR 2
++PDS+DQLI+ ++ ++L EESRR+
Sbjct: 97 SLPDSYDQLIINITNNILSDVLNFNDVLNAVLSEESRRK 135
>BAD34493.1 Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 87.0 bits (214), Expect = 7e-18
Identities = 46/99 (46%), Positives = 66/99 (66%), Gaps = 3/99 (3%)
Frame = -3
Query: 289 LYESKSFSNKIFLQRQLYNLRMREGSSLQDHLNDFNTLVSKLAAVEVKIDDEEKAALLLC 110
LYE+KS NKIFL+R+LY LRM E +S+ +HLN NTL S+L ++ KI+ +E+A LLL
Sbjct: 87 LYEAKSLHNKIFLKRKLYTLRMSESTSVTEHLNTLNTLFSQLTSLSCKIEPQERAELLLQ 146
Query: 109 TMPDSWDQLIM---XXXXXXXXXXXTIVGSLLMEESRRR 2
++PDS+DQLI+ + ++L EESRR+
Sbjct: 147 SLPDSYDQLIINLTNNILTDYLVFDDVAAAVLEEESRRK 185
>KOM49095.1 hypothetical protein LR48_Vigan07g279900 [Vigna angularis]
Length = 270
Score = 84.7 bits (208), Expect = 8e-18
Identities = 45/99 (45%), Positives = 64/99 (64%), Gaps = 3/99 (3%)
Frame = -3
Query: 289 LYESKSFSNKIFLQRQLYNLRMREGSSLQDHLNDFNTLVSKLAAVEVKIDDEEKAALLLC 110
LYE KS +IFL+R+LY LRM E +++ DH+N NTL ++L+A + I + E+A LLL
Sbjct: 86 LYEVKSLHTRIFLKRKLYTLRMSESTTVTDHINHLNTLFAQLSAADFNIVENERAELLLQ 145
Query: 109 TMPDSWDQLIM---XXXXXXXXXXXTIVGSLLMEESRRR 2
++PDS+DQLIM + G++L EESRRR
Sbjct: 146 SLPDSYDQLIMNITNNNIEGSLHFEDVAGAILEEESRRR 184
>KHN45809.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 183
Score = 82.4 bits (202), Expect = 1e-17
Identities = 33/66 (50%), Positives = 54/66 (81%)
Frame = -3
Query: 289 LYESKSFSNKIFLQRQLYNLRMREGSSLQDHLNDFNTLVSKLAAVEVKIDDEEKAALLLC 110
+YE S +NK++L R+L+NL+M EG S+ DH+N+FNT++++L +V++K +DE KA +LL
Sbjct: 90 MYEKSSAANKVYLMRRLFNLKMGEGISVTDHINEFNTILAQLESVQIKFEDEVKALILLS 149
Query: 109 TMPDSW 92
++PDSW
Sbjct: 150 SLPDSW 155
>KYP32730.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 187
Score = 82.4 bits (202), Expect = 1e-17
Identities = 36/66 (54%), Positives = 53/66 (80%)
Frame = -3
Query: 289 LYESKSFSNKIFLQRQLYNLRMREGSSLQDHLNDFNTLVSKLAAVEVKIDDEEKAALLLC 110
+YE S SNK+FL QL N++M EG+S+ DH+N+FN+L+S+L +V++K DDE +A LLL
Sbjct: 40 MYEKPSASNKVFLIYQLVNMKMGEGASVTDHVNEFNSLLSRLVSVDIKFDDEVQALLLLS 99
Query: 109 TMPDSW 92
++PDSW
Sbjct: 100 SLPDSW 105
>KHN28193.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 183
Score = 82.0 bits (201), Expect = 2e-17
Identities = 33/66 (50%), Positives = 54/66 (81%)
Frame = -3
Query: 289 LYESKSFSNKIFLQRQLYNLRMREGSSLQDHLNDFNTLVSKLAAVEVKIDDEEKAALLLC 110
+YE S +NK++L R+L+NL+M EG S+ DH+N+FNT++++L +V++K +DE KA +LL
Sbjct: 90 MYEKPSAANKVYLMRRLFNLKMGEGISVTDHINEFNTILAQLESVQIKFEDEVKALILLS 149
Query: 109 TMPDSW 92
++PDSW
Sbjct: 150 SLPDSW 155
>KHN08937.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Glycine soja]
Length = 183
Score = 82.0 bits (201), Expect = 2e-17
Identities = 33/66 (50%), Positives = 54/66 (81%)
Frame = -3
Query: 289 LYESKSFSNKIFLQRQLYNLRMREGSSLQDHLNDFNTLVSKLAAVEVKIDDEEKAALLLC 110
+YE S +NK++L R+L+NL+M EG S+ DH+N+FNT++++L +V++K +DE KA +LL
Sbjct: 90 MYEKPSAANKVYLMRRLFNLKMGEGISVTDHINEFNTILAQLESVQIKFEDEVKALILLS 149
Query: 109 TMPDSW 92
++PDSW
Sbjct: 150 SLPDSW 155
>KYP53220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 184
Score = 81.6 bits (200), Expect = 3e-17
Identities = 36/66 (54%), Positives = 52/66 (78%)
Frame = -3
Query: 289 LYESKSFSNKIFLQRQLYNLRMREGSSLQDHLNDFNTLVSKLAAVEVKIDDEEKAALLLC 110
+YE S SNK+FL RQL N +M EG+S+ DH+N+FN+L+ +L +V++K DDE +A LLL
Sbjct: 89 IYEKPSTSNKVFLIRQLVNTKMGEGASVTDHVNEFNSLLLRLVSVDIKFDDEVQALLLLS 148
Query: 109 TMPDSW 92
++PDSW
Sbjct: 149 SLPDSW 154
>KYP56907.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 131
Score = 80.1 bits (196), Expect = 3e-17
Identities = 34/70 (48%), Positives = 54/70 (77%)
Frame = -3
Query: 289 LYESKSFSNKIFLQRQLYNLRMREGSSLQDHLNDFNTLVSKLAAVEVKIDDEEKAALLLC 110
++E S SNK+FL QL N +MREGSS+ DH+N+FN+L+S+L ++++K +DE ++ LLL
Sbjct: 32 MFEKPSSSNKVFLIHQLVNTKMREGSSVIDHMNEFNSLLSRLVSMDIKFNDEVQSLLLLS 91
Query: 109 TMPDSWDQLI 80
+PDSW + +
Sbjct: 92 LLPDSWSRTV 101
>KNA08435.1 hypothetical protein SOVF_162690, partial [Spinacia oleracea]
Length = 260
Score = 82.8 bits (203), Expect = 4e-17
Identities = 42/96 (43%), Positives = 61/96 (63%)
Frame = -3
Query: 289 LYESKSFSNKIFLQRQLYNLRMREGSSLQDHLNDFNTLVSKLAAVEVKIDDEEKAALLLC 110
LYE+KS NKIFL+R+LY LRM E +S+ DH+N NTL S+L + ++ E+A +LL
Sbjct: 68 LYEAKSLHNKIFLKRRLYTLRMMEETSMTDHINTLNTLFSQLTTMGHNVETGERAEILLQ 127
Query: 109 TMPDSWDQLIMXXXXXXXXXXXTIVGSLLMEESRRR 2
++PDS+DQLI+ V + ++EE RR
Sbjct: 128 SLPDSYDQLIINLTNNVETLVFDNVAAAILEEESRR 163
>ACL97386.1 Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 84.7 bits (208), Expect = 4e-17
Identities = 46/99 (46%), Positives = 64/99 (64%), Gaps = 3/99 (3%)
Frame = -3
Query: 289 LYESKSFSNKIFLQRQLYNLRMREGSSLQDHLNDFNTLVSKLAAVEVKIDDEEKAALLLC 110
LYE KS N+IFL+R+LY L+M E +S+ DH+N NTL S+L A + KI E+A LLL
Sbjct: 86 LYEVKSLHNRIFLKRRLYTLQMGESTSVTDHINTLNTLFSQLTASDFKIAKNERAELLLQ 145
Query: 109 TMPDSWDQLIM---XXXXXXXXXXXTIVGSLLMEESRRR 2
++PDS+DQLI+ + G++L EESRR+
Sbjct: 146 SLPDSYDQLIINITNNNIADTLHFDDVAGAILEEESRRK 184
>KYP44430.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 121
Score = 79.3 bits (194), Expect = 5e-17
Identities = 34/66 (51%), Positives = 51/66 (77%)
Frame = -3
Query: 289 LYESKSFSNKIFLQRQLYNLRMREGSSLQDHLNDFNTLVSKLAAVEVKIDDEEKAALLLC 110
+YE S SNK+FL R+L N +M EG+S+ DH+N+FN+L+ +L ++++K DDE +A LLL
Sbjct: 1 MYEKPSTSNKVFLIRELVNTKMGEGASVTDHVNEFNSLLLRLVSIDIKFDDEVQALLLLS 60
Query: 109 TMPDSW 92
+PDSW
Sbjct: 61 LLPDSW 66