BLASTX nr result

ID: Ephedra29_contig00013149 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00013149
         (698 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJA90762.1 RNA-dependent RNA polymerase 2 [Cycas revoluta]             69   7e-10
AJA90786.1 RNA-dependent RNA polymerase 2 [Pinus canariensis]          67   5e-09
AJP06346.1 RDR2 [Pinus tabuliformis]                                   67   5e-09
AJA90778.1 RNA-dependent RNA polymerase 2 [Ginkgo biloba]              64   5e-08
JAT64931.1 RNA-dependent RNA polymerase 2 [Anthurium amnicola]         62   1e-07
XP_008453109.1 PREDICTED: RNA-dependent RNA polymerase 2 [Cucumi...    62   2e-07
JAT59461.1 RNA-dependent RNA polymerase 2, partial [Anthurium am...    62   2e-07
CDP05597.1 unnamed protein product [Coffea canephora]                  61   4e-07
NP_001267608.1 RNA-dependent RNA polymerase 2-like [Cucumis sati...    60   5e-07
KCW64484.1 hypothetical protein EUGRSUZ_G02090 [Eucalyptus grandis]    60   7e-07
CDP05596.1 unnamed protein product [Coffea canephora]                  60   7e-07
XP_016547175.1 PREDICTED: probable RNA-dependent RNA polymerase ...    60   1e-06
XP_017227942.1 PREDICTED: RNA-dependent RNA polymerase 2-like [D...    60   1e-06
KZM81081.1 hypothetical protein DCAR_031305 [Daucus carota subsp...    60   1e-06
KFK22653.1 hypothetical protein AALP_AAs69903U000100, partial [A...    59   1e-06
KFK22402.1 hypothetical protein AALP_AAs59355U000100, partial [A...    59   1e-06
CDP05599.1 unnamed protein product [Coffea canephora]                  59   1e-06
XP_006647856.1 PREDICTED: probable RNA-dependent RNA polymerase ...    59   1e-06
XP_008220919.1 PREDICTED: probable RNA-dependent RNA polymerase ...    59   1e-06
XP_010107450.1 RNA-dependent RNA polymerase 2 [Morus notabilis] ...    59   2e-06

>AJA90762.1 RNA-dependent RNA polymerase 2 [Cycas revoluta]
          Length = 1117

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 31/50 (62%), Positives = 37/50 (74%)
 Frame = -1

Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
           PH NECS S+LD DLYF+SWDE LI P QD  MD + R P +L+H +TIE
Sbjct: 812 PHPNECSGSDLDGDLYFVSWDELLIPPDQDQPMDYVGRQPIQLDHEVTIE 861


>AJA90786.1 RNA-dependent RNA polymerase 2 [Pinus canariensis]
          Length = 1114

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 30/50 (60%), Positives = 37/50 (74%)
 Frame = -1

Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
           PH  ECS S+LD DLYF+SWDE LI P QD+ MD + R P KL+H +TI+
Sbjct: 811 PHPYECSGSDLDGDLYFVSWDELLIPPEQDSPMDYVGRQPIKLDHDVTIK 860


>AJP06346.1 RDR2 [Pinus tabuliformis]
          Length = 1123

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 30/50 (60%), Positives = 37/50 (74%)
 Frame = -1

Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
           PH  ECS S+LD DLYF+SWDE LI P QD+ MD + R P KL+H +TI+
Sbjct: 811 PHPYECSGSDLDGDLYFVSWDELLIPPEQDSPMDYVGRQPIKLDHDVTIK 860


>AJA90778.1 RNA-dependent RNA polymerase 2 [Ginkgo biloba]
          Length = 1114

 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 30/50 (60%), Positives = 35/50 (70%)
 Frame = -1

Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
           PH NECS S+LD DLYF SWDE L+ P QD   D I R P +L+H +TIE
Sbjct: 813 PHPNECSGSDLDGDLYFGSWDELLLPPEQDPPTDYIGRQPIQLDHEVTIE 862


>JAT64931.1 RNA-dependent RNA polymerase 2 [Anthurium amnicola]
          Length = 601

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 27/50 (54%), Positives = 33/50 (66%)
 Frame = -1

Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
           PH NECS  +LD DLYF+SWDE  I P  D  MD I R P  ++H +T+E
Sbjct: 303 PHPNECSGGDLDGDLYFVSWDENFIPPMTDKPMDYIARRPRIVDHDVTLE 352


>XP_008453109.1 PREDICTED: RNA-dependent RNA polymerase 2 [Cucumis melo]
          Length = 1117

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 28/50 (56%), Positives = 34/50 (68%)
 Frame = -1

Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
           PH NECS  +LD DLYFISWDE LI P  +A MD   R P  ++H +T+E
Sbjct: 813 PHTNECSGGDLDGDLYFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLE 862


>JAT59461.1 RNA-dependent RNA polymerase 2, partial [Anthurium amnicola]
          Length = 1132

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 27/50 (54%), Positives = 33/50 (66%)
 Frame = -1

Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
           PH NECS  +LD DLYF+SWDE  I P  D  MD I R P  ++H +T+E
Sbjct: 834 PHPNECSGGDLDGDLYFVSWDENFIPPMTDKPMDYIARRPRIVDHDVTLE 883


>CDP05597.1 unnamed protein product [Coffea canephora]
          Length = 1187

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 27/50 (54%), Positives = 33/50 (66%)
 Frame = -1

Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
           PH NECS S+LD D+YF+ WD  LI P Q   MD    PP +L+H +TIE
Sbjct: 850 PHPNECSGSDLDGDVYFVCWDRDLIPPQQHPPMDYTPAPPMQLDHEVTIE 899


>NP_001267608.1 RNA-dependent RNA polymerase 2-like [Cucumis sativus] ADU77018.1
            RNA-dependent RNA polymerase 2 [Cucumis sativus]
            KGN63597.1 hypothetical protein Csa_1G005580 [Cucumis
            sativus]
          Length = 1117

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 32/69 (46%), Positives = 39/69 (56%)
 Frame = -1

Query: 653  ELEAYQI*DAEQASTVNAWPHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPS 474
            ELE   + D        A PH NECS  +LD DLYFISWDE LI P  +A MD   R P 
Sbjct: 794  ELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPKTEAPMDYTGRRPR 853

Query: 473  KLNHSITIE 447
             ++H + +E
Sbjct: 854  IMDHDVKLE 862


>KCW64484.1 hypothetical protein EUGRSUZ_G02090 [Eucalyptus grandis]
          Length = 866

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 27/53 (50%), Positives = 34/53 (64%)
 Frame = -1

Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIELPS 438
           PH NECS S+LD D+YF+SWD  LI   Q   MD    P  +L+H +TIE+ S
Sbjct: 805 PHPNECSGSDLDGDIYFVSWDSELIPHHQRQPMDYTPAPSERLDHDVTIEIVS 857


>CDP05596.1 unnamed protein product [Coffea canephora]
          Length = 1112

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 27/50 (54%), Positives = 32/50 (64%)
 Frame = -1

Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
           PH NECS S+LD D+YF+ WD  LI P QD  MD    P  +L H +TIE
Sbjct: 791 PHTNECSGSDLDGDIYFVCWDPDLIPPRQDEPMDYTPAPTMQLEHEVTIE 840


>XP_016547175.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Capsicum
           annuum]
          Length = 1116

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 25/50 (50%), Positives = 36/50 (72%)
 Frame = -1

Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
           PH NECS S+LD D+YF+ WD+ L+ P Q  AM+ +  P ++L+H +TIE
Sbjct: 794 PHPNECSGSDLDGDIYFVCWDQDLVPPRQVEAMEYLPAPNTQLDHDVTIE 843


>XP_017227942.1 PREDICTED: RNA-dependent RNA polymerase 2-like [Daucus carota
           subsp. sativus]
          Length = 1118

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 27/50 (54%), Positives = 34/50 (68%)
 Frame = -1

Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
           PH NECS  +LD DLYFISWDE+LI P   A MD   R P  ++H +++E
Sbjct: 817 PHPNECSGGDLDGDLYFISWDEKLIPPRTVAPMDYTGRRPRLMDHDVSLE 866


>KZM81081.1 hypothetical protein DCAR_031305 [Daucus carota subsp. sativus]
          Length = 1325

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 27/50 (54%), Positives = 34/50 (68%)
 Frame = -1

Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
           PH NECS  +LD DLYFISWDE+LI P   A MD   R P  ++H +++E
Sbjct: 817 PHPNECSGGDLDGDLYFISWDEKLIPPRTVAPMDYTGRRPRLMDHDVSLE 866


>KFK22653.1 hypothetical protein AALP_AAs69903U000100, partial [Arabis alpina]
          Length = 364

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 26/50 (52%), Positives = 31/50 (62%)
 Frame = -1

Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
           PH NECS S+LD D+YF+ WD  LI P     MD    PP  L+H +TIE
Sbjct: 300 PHPNECSGSDLDGDIYFVCWDPELIPPRTSEPMDYTPEPPQILDHDVTIE 349


>KFK22402.1 hypothetical protein AALP_AAs59355U000100, partial [Arabis alpina]
          Length = 379

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 26/50 (52%), Positives = 31/50 (62%)
 Frame = -1

Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
           PH NECS S+LD D+YF+ WD  LI P     MD    PP  L+H +TIE
Sbjct: 317 PHPNECSGSDLDGDIYFVCWDPELIPPRTSEPMDYTPEPPQILDHDVTIE 366


>CDP05599.1 unnamed protein product [Coffea canephora]
          Length = 1113

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 27/50 (54%), Positives = 32/50 (64%)
 Frame = -1

Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
           PH NECS S+LD D YF+ WD  LI P QD  MD    P  +L+H +TIE
Sbjct: 792 PHPNECSGSDLDGDTYFVCWDPDLIPPRQDRPMDYTPAPTMQLDHKVTIE 841


>XP_006647856.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Oryza
           brachyantha]
          Length = 1113

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 27/50 (54%), Positives = 32/50 (64%)
 Frame = -1

Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
           PH NECS S+LD D+YF+SWD  LI P   A MD    P   L+H +TIE
Sbjct: 792 PHPNECSGSDLDGDIYFVSWDSTLIPPRMVAPMDYTPAPTETLDHDVTIE 841


>XP_008220919.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Prunus mume]
          Length = 1123

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 30/79 (37%), Positives = 41/79 (51%)
 Frame = -1

Query: 683  GAAMIYQETEELEAYQI*DAEQASTVNAWPHHNECSRSNLDRDLYFISWDERLILPFQDA 504
            G   + +  +  E Y + D          PH NECS S+LD D+YF+ WD+ LI   Q  
Sbjct: 767  GDVRVLKAVDVPELYHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDDELIPSGQIQ 826

Query: 503  AMDCIDRPPSKLNHSITIE 447
             MD    PP +L+H +TIE
Sbjct: 827  PMDYTPAPPIELDHDVTIE 845


>XP_010107450.1 RNA-dependent RNA polymerase 2 [Morus notabilis] EXC16034.1
           RNA-dependent RNA polymerase 2 [Morus notabilis]
          Length = 1115

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 27/50 (54%), Positives = 33/50 (66%)
 Frame = -1

Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
           PH NECS  +LD DL+FISWD  LI P   A MD I R P  ++H +T+E
Sbjct: 811 PHPNECSGGDLDGDLFFISWDTNLIPPRTTAPMDYIGRRPRIMDHDVTLE 860


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