BLASTX nr result
ID: Ephedra29_contig00013149
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00013149
(698 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJA90762.1 RNA-dependent RNA polymerase 2 [Cycas revoluta] 69 7e-10
AJA90786.1 RNA-dependent RNA polymerase 2 [Pinus canariensis] 67 5e-09
AJP06346.1 RDR2 [Pinus tabuliformis] 67 5e-09
AJA90778.1 RNA-dependent RNA polymerase 2 [Ginkgo biloba] 64 5e-08
JAT64931.1 RNA-dependent RNA polymerase 2 [Anthurium amnicola] 62 1e-07
XP_008453109.1 PREDICTED: RNA-dependent RNA polymerase 2 [Cucumi... 62 2e-07
JAT59461.1 RNA-dependent RNA polymerase 2, partial [Anthurium am... 62 2e-07
CDP05597.1 unnamed protein product [Coffea canephora] 61 4e-07
NP_001267608.1 RNA-dependent RNA polymerase 2-like [Cucumis sati... 60 5e-07
KCW64484.1 hypothetical protein EUGRSUZ_G02090 [Eucalyptus grandis] 60 7e-07
CDP05596.1 unnamed protein product [Coffea canephora] 60 7e-07
XP_016547175.1 PREDICTED: probable RNA-dependent RNA polymerase ... 60 1e-06
XP_017227942.1 PREDICTED: RNA-dependent RNA polymerase 2-like [D... 60 1e-06
KZM81081.1 hypothetical protein DCAR_031305 [Daucus carota subsp... 60 1e-06
KFK22653.1 hypothetical protein AALP_AAs69903U000100, partial [A... 59 1e-06
KFK22402.1 hypothetical protein AALP_AAs59355U000100, partial [A... 59 1e-06
CDP05599.1 unnamed protein product [Coffea canephora] 59 1e-06
XP_006647856.1 PREDICTED: probable RNA-dependent RNA polymerase ... 59 1e-06
XP_008220919.1 PREDICTED: probable RNA-dependent RNA polymerase ... 59 1e-06
XP_010107450.1 RNA-dependent RNA polymerase 2 [Morus notabilis] ... 59 2e-06
>AJA90762.1 RNA-dependent RNA polymerase 2 [Cycas revoluta]
Length = 1117
Score = 68.9 bits (167), Expect = 7e-10
Identities = 31/50 (62%), Positives = 37/50 (74%)
Frame = -1
Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
PH NECS S+LD DLYF+SWDE LI P QD MD + R P +L+H +TIE
Sbjct: 812 PHPNECSGSDLDGDLYFVSWDELLIPPDQDQPMDYVGRQPIQLDHEVTIE 861
>AJA90786.1 RNA-dependent RNA polymerase 2 [Pinus canariensis]
Length = 1114
Score = 66.6 bits (161), Expect = 5e-09
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = -1
Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
PH ECS S+LD DLYF+SWDE LI P QD+ MD + R P KL+H +TI+
Sbjct: 811 PHPYECSGSDLDGDLYFVSWDELLIPPEQDSPMDYVGRQPIKLDHDVTIK 860
>AJP06346.1 RDR2 [Pinus tabuliformis]
Length = 1123
Score = 66.6 bits (161), Expect = 5e-09
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = -1
Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
PH ECS S+LD DLYF+SWDE LI P QD+ MD + R P KL+H +TI+
Sbjct: 811 PHPYECSGSDLDGDLYFVSWDELLIPPEQDSPMDYVGRQPIKLDHDVTIK 860
>AJA90778.1 RNA-dependent RNA polymerase 2 [Ginkgo biloba]
Length = 1114
Score = 63.5 bits (153), Expect = 5e-08
Identities = 30/50 (60%), Positives = 35/50 (70%)
Frame = -1
Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
PH NECS S+LD DLYF SWDE L+ P QD D I R P +L+H +TIE
Sbjct: 813 PHPNECSGSDLDGDLYFGSWDELLLPPEQDPPTDYIGRQPIQLDHEVTIE 862
>JAT64931.1 RNA-dependent RNA polymerase 2 [Anthurium amnicola]
Length = 601
Score = 62.0 bits (149), Expect = 1e-07
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = -1
Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
PH NECS +LD DLYF+SWDE I P D MD I R P ++H +T+E
Sbjct: 303 PHPNECSGGDLDGDLYFVSWDENFIPPMTDKPMDYIARRPRIVDHDVTLE 352
>XP_008453109.1 PREDICTED: RNA-dependent RNA polymerase 2 [Cucumis melo]
Length = 1117
Score = 62.0 bits (149), Expect = 2e-07
Identities = 28/50 (56%), Positives = 34/50 (68%)
Frame = -1
Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
PH NECS +LD DLYFISWDE LI P +A MD R P ++H +T+E
Sbjct: 813 PHTNECSGGDLDGDLYFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLE 862
>JAT59461.1 RNA-dependent RNA polymerase 2, partial [Anthurium amnicola]
Length = 1132
Score = 62.0 bits (149), Expect = 2e-07
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = -1
Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
PH NECS +LD DLYF+SWDE I P D MD I R P ++H +T+E
Sbjct: 834 PHPNECSGGDLDGDLYFVSWDENFIPPMTDKPMDYIARRPRIVDHDVTLE 883
>CDP05597.1 unnamed protein product [Coffea canephora]
Length = 1187
Score = 60.8 bits (146), Expect = 4e-07
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = -1
Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
PH NECS S+LD D+YF+ WD LI P Q MD PP +L+H +TIE
Sbjct: 850 PHPNECSGSDLDGDVYFVCWDRDLIPPQQHPPMDYTPAPPMQLDHEVTIE 899
>NP_001267608.1 RNA-dependent RNA polymerase 2-like [Cucumis sativus] ADU77018.1
RNA-dependent RNA polymerase 2 [Cucumis sativus]
KGN63597.1 hypothetical protein Csa_1G005580 [Cucumis
sativus]
Length = 1117
Score = 60.5 bits (145), Expect = 5e-07
Identities = 32/69 (46%), Positives = 39/69 (56%)
Frame = -1
Query: 653 ELEAYQI*DAEQASTVNAWPHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPS 474
ELE + D A PH NECS +LD DLYFISWDE LI P +A MD R P
Sbjct: 794 ELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPKTEAPMDYTGRRPR 853
Query: 473 KLNHSITIE 447
++H + +E
Sbjct: 854 IMDHDVKLE 862
>KCW64484.1 hypothetical protein EUGRSUZ_G02090 [Eucalyptus grandis]
Length = 866
Score = 60.1 bits (144), Expect = 7e-07
Identities = 27/53 (50%), Positives = 34/53 (64%)
Frame = -1
Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIELPS 438
PH NECS S+LD D+YF+SWD LI Q MD P +L+H +TIE+ S
Sbjct: 805 PHPNECSGSDLDGDIYFVSWDSELIPHHQRQPMDYTPAPSERLDHDVTIEIVS 857
>CDP05596.1 unnamed protein product [Coffea canephora]
Length = 1112
Score = 60.1 bits (144), Expect = 7e-07
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = -1
Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
PH NECS S+LD D+YF+ WD LI P QD MD P +L H +TIE
Sbjct: 791 PHTNECSGSDLDGDIYFVCWDPDLIPPRQDEPMDYTPAPTMQLEHEVTIE 840
>XP_016547175.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Capsicum
annuum]
Length = 1116
Score = 59.7 bits (143), Expect = 1e-06
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = -1
Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
PH NECS S+LD D+YF+ WD+ L+ P Q AM+ + P ++L+H +TIE
Sbjct: 794 PHPNECSGSDLDGDIYFVCWDQDLVPPRQVEAMEYLPAPNTQLDHDVTIE 843
>XP_017227942.1 PREDICTED: RNA-dependent RNA polymerase 2-like [Daucus carota
subsp. sativus]
Length = 1118
Score = 59.7 bits (143), Expect = 1e-06
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = -1
Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
PH NECS +LD DLYFISWDE+LI P A MD R P ++H +++E
Sbjct: 817 PHPNECSGGDLDGDLYFISWDEKLIPPRTVAPMDYTGRRPRLMDHDVSLE 866
>KZM81081.1 hypothetical protein DCAR_031305 [Daucus carota subsp. sativus]
Length = 1325
Score = 59.7 bits (143), Expect = 1e-06
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = -1
Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
PH NECS +LD DLYFISWDE+LI P A MD R P ++H +++E
Sbjct: 817 PHPNECSGGDLDGDLYFISWDEKLIPPRTVAPMDYTGRRPRLMDHDVSLE 866
>KFK22653.1 hypothetical protein AALP_AAs69903U000100, partial [Arabis alpina]
Length = 364
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = -1
Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
PH NECS S+LD D+YF+ WD LI P MD PP L+H +TIE
Sbjct: 300 PHPNECSGSDLDGDIYFVCWDPELIPPRTSEPMDYTPEPPQILDHDVTIE 349
>KFK22402.1 hypothetical protein AALP_AAs59355U000100, partial [Arabis alpina]
Length = 379
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = -1
Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
PH NECS S+LD D+YF+ WD LI P MD PP L+H +TIE
Sbjct: 317 PHPNECSGSDLDGDIYFVCWDPELIPPRTSEPMDYTPEPPQILDHDVTIE 366
>CDP05599.1 unnamed protein product [Coffea canephora]
Length = 1113
Score = 59.3 bits (142), Expect = 1e-06
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = -1
Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
PH NECS S+LD D YF+ WD LI P QD MD P +L+H +TIE
Sbjct: 792 PHPNECSGSDLDGDTYFVCWDPDLIPPRQDRPMDYTPAPTMQLDHKVTIE 841
>XP_006647856.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Oryza
brachyantha]
Length = 1113
Score = 59.3 bits (142), Expect = 1e-06
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = -1
Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
PH NECS S+LD D+YF+SWD LI P A MD P L+H +TIE
Sbjct: 792 PHPNECSGSDLDGDIYFVSWDSTLIPPRMVAPMDYTPAPTETLDHDVTIE 841
>XP_008220919.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Prunus mume]
Length = 1123
Score = 59.3 bits (142), Expect = 1e-06
Identities = 30/79 (37%), Positives = 41/79 (51%)
Frame = -1
Query: 683 GAAMIYQETEELEAYQI*DAEQASTVNAWPHHNECSRSNLDRDLYFISWDERLILPFQDA 504
G + + + E Y + D PH NECS S+LD D+YF+ WD+ LI Q
Sbjct: 767 GDVRVLKAVDVPELYHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDDELIPSGQIQ 826
Query: 503 AMDCIDRPPSKLNHSITIE 447
MD PP +L+H +TIE
Sbjct: 827 PMDYTPAPPIELDHDVTIE 845
>XP_010107450.1 RNA-dependent RNA polymerase 2 [Morus notabilis] EXC16034.1
RNA-dependent RNA polymerase 2 [Morus notabilis]
Length = 1115
Score = 58.9 bits (141), Expect = 2e-06
Identities = 27/50 (54%), Positives = 33/50 (66%)
Frame = -1
Query: 596 PHHNECSRSNLDRDLYFISWDERLILPFQDAAMDCIDRPPSKLNHSITIE 447
PH NECS +LD DL+FISWD LI P A MD I R P ++H +T+E
Sbjct: 811 PHPNECSGGDLDGDLFFISWDTNLIPPRTTAPMDYIGRRPRIMDHDVTLE 860