BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00013121
         (1070 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KFM58955.1 Copia protein, partial [Stegodyphus mimosarum]              47   3e-07
GAQ92995.1 hypothetical protein KFL_012400010, partial [Klebsorm...    59   1e-06
GAQ88446.1 5'-3' exoribonuclease 2 [Klebsormidium flaccidum]           50   2e-06
KMQ86082.1 gag-pol polyprotein [Lasius niger]                          42   4e-06
GAQ93253.1 hypothetical protein KFL_013910010, partial [Klebsorm...    56   5e-06
CAB46043.1 retrotransposon like protein [Arabidopsis thaliana] C...    48   6e-06
XP_015167893.1 PREDICTED: uncharacterized protein LOC107062130 [...    53   8e-06

>KFM58955.1 Copia protein, partial [Stegodyphus mimosarum]
          Length = 679

 Score = 46.6 bits (109), Expect(2) = 3e-07
 Identities = 32/137 (23%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
 Frame = +3

Query: 351 IQSEKFSDGIWMKLKNILAKNSVAATATLRRKLHNLNFPENGNIAELIEDTYEIRDQLDR 530
           ++ E  + G W KLK+I  ++++++   L RKL+++   E+G++   I    ++ ++L  
Sbjct: 66  VRDETTTAGTWQKLKSIHERSNLSSKLYLLRKLYSIKMAEHGDMIAHITHMMDLVERLKA 125

Query: 531 SGEPAKEDELFYAILEALPEEWDNY-------KDNLL---LLKTNITFDELCQALIHNLK 680
            GE   +  +   +L ++PE ++N        ++ L+   L+KT +T DE  + L     
Sbjct: 126 IGENIPDQHVAALMLVSIPESYNNLITAIEAREETLITTDLVKTKLT-DEYNRRLEQQAD 184

Query: 681 NRTKSSVEIWNTANVKH 731
             + SS    +  N ++
Sbjct: 185 RSSNSSTAFKSAINARN 201



 Score = 37.4 bits (85), Expect(2) = 3e-07
 Identities = 17/53 (32%), Positives = 31/53 (58%)
 Frame = +2

Query: 173 LTRSNYNIWSQTIETLLDVNGLLNIVTKTPPTIKNNVWMKKDRHARAFLKLSV 331
           L   NY  W   I+ LL  +GL +++   PP+  ++ ++K+D+ ARA + L +
Sbjct: 6   LNSENYATWKFKIQMLLMRDGLDDLLYSPPPSKPDDEFLKRDKQARAIINLCI 58


>GAQ92995.1 hypothetical protein KFL_012400010, partial [Klebsormidium
           flaccidum]
          Length = 170

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 35/102 (34%), Positives = 52/102 (50%)
 Frame = +3

Query: 348 LIQSEKFSDGIWMKLKNILAKNSVAATATLRRKLHNLNFPENGNIAELIEDTYEIRDQLD 527
           LI+ E  ++  W KL+ I  K S A    LRRKL  L   +   IAE + +  E++  L+
Sbjct: 12  LIEGEPTAEKAWKKLEEIFEKRSNARMIQLRRKLTGLRVTKGKAIAEYLGEFRELKIDLE 71

Query: 528 RSGEPAKEDELFYAILEALPEEWDNYKDNLLLLKTNITFDEL 653
            +G+   E EL     E LPEE+    + L L +  +T DE+
Sbjct: 72  AAGQTVSEGELAVHAFEGLPEEYATVVEFLELGEEELTLDEI 113


>GAQ88446.1 5'-3' exoribonuclease 2 [Klebsormidium flaccidum]
          Length = 565

 Score = 49.7 bits (117), Expect(2) = 2e-06
 Identities = 29/90 (32%), Positives = 46/90 (51%)
 Frame = +3

Query: 348 LIQSEKFSDGIWMKLKNILAKNSVAATATLRRKLHNLNFPENGNIAELIEDTYEIRDQLD 527
           LI  E  + G W KLK    K S A    L  KL N+   E  +IAE + +  EI+  L+
Sbjct: 69  LIAGETTAAGAWKKLKQNFEKTSNARVVQLTGKLTNMKLGEKQSIAEYLGEFREIKVDLE 128

Query: 528 RSGEPAKEDELFYAILEALPEEWDNYKDNL 617
            +G+   + +L    L+ LP+E++  ++ L
Sbjct: 129 AAGQTISDLQLTVHALKGLPKEYETLREIL 158



 Score = 31.2 bits (69), Expect(2) = 2e-06
 Identities = 18/53 (33%), Positives = 27/53 (50%)
 Frame = +2

Query: 173 LTRSNYNIWSQTIETLLDVNGLLNIVTKTPPTIKNNVWMKKDRHARAFLKLSV 331
           L   N+ +W   I+ LL+ NGL  +  + P T +     K    A+A +KLSV
Sbjct: 14  LKGENWGVWKDKIQALLEFNGLF-VAIEEPDTEEGR---KASTKAKALIKLSV 62


>KMQ86082.1 gag-pol polyprotein [Lasius niger]
          Length = 1319

 Score = 42.4 bits (98), Expect(2) = 4e-06
 Identities = 22/63 (34%), Positives = 34/63 (53%)
 Frame = +2

Query: 143 LKFQLPNALLLTRSNYNIWSQTIETLLDVNGLLNIVTKTPPTIKNNVWMKKDRHARAFLK 322
           LKF +P   LL   NY  W   +  +L  + L +IV++  P   N+ W K++  A A++ 
Sbjct: 6   LKFNIP---LLNGGNYVFWKTKVRAILIRDDLWDIVSEPKPVQVNDAWTKRNNKAMAYIT 62

Query: 323 LSV 331
           LSV
Sbjct: 63  LSV 65



 Score = 37.7 bits (86), Expect(2) = 4e-06
 Identities = 19/73 (26%), Positives = 41/73 (56%)
 Frame = +3

Query: 378 IWMKLKNILAKNSVAATATLRRKLHNLNFPENGNIAELIEDTYEIRDQLDRSGEPAKEDE 557
           +W  L     +++  +   LRRKL+ +++  +G + + I+   E+   L  SG+P +++E
Sbjct: 82  VWQALSRKYERSTFGSRLYLRRKLYGIHY-RSGPMCKHIDLIMEVVGLLRGSGKPLEDEE 140

Query: 558 LFYAILEALPEEW 596
           +   +L +LPE +
Sbjct: 141 IVAVLLVSLPESY 153


>GAQ93253.1 hypothetical protein KFL_013910010, partial [Klebsormidium
           flaccidum]
          Length = 155

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 33/102 (32%), Positives = 53/102 (51%)
 Frame = +3

Query: 348 LIQSEKFSDGIWMKLKNILAKNSVAATATLRRKLHNLNFPENGNIAELIEDTYEIRDQLD 527
           LI+ E  ++  W KL++   K S A    LRRKL  L   +   IAE + +  E++  L+
Sbjct: 12  LIEDEHTAETAWKKLEDNFEKRSNARMIQLRRKLSGLRLTKGKAIAEYLGEFRELKIDLE 71

Query: 528 RSGEPAKEDELFYAILEALPEEWDNYKDNLLLLKTNITFDEL 653
            +G+   E EL    LE LP+E+    + + L +  +T DE+
Sbjct: 72  AAGQTVSEGELAVLALEILPKEYATVVEFVELEEEELTLDEI 113


>CAB46043.1 retrotransposon like protein [Arabidopsis thaliana] CAB80958.1
           retrotransposon like protein [Arabidopsis thaliana]
          Length = 1474

 Score = 47.8 bits (112), Expect(2) = 6e-06
 Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 4/152 (2%)
 Frame = +3

Query: 327 LSPNIHGLIQSEKFSDGIWMKLKNILAKNSVAATATLRRKLHNLNFPENGNIAELIEDTY 506
           +SP +  L+     +  IW  L N  AK+S      LR ++  L       I E +    
Sbjct: 100 ISPPVQPLVSRATKASQIWKTLTNTYAKSSYDHIKQLRTQIKQLK-KGTKTIDEYVLSHT 158

Query: 507 EIRDQLDRSGEPAKEDELFYAILEALPEEWDNYKDNLLLLKTNITFDELCQALIHN---- 674
            + DQL   G+P + +E    ILE LPE++    D +       +  E+ + LI++    
Sbjct: 159 TLLDQLAILGKPMEHEEQVERILEGLPEDYKTVVDQIEGKDNTPSITEIHERLINHEAKL 218

Query: 675 LKNRTKSSVEIWNTANVKHSTSH*NTVINLKN 770
           L     SS  +  +ANV     H N   N +N
Sbjct: 219 LSTAALSSSSLPMSANVAQQRHHNNNRNNNQN 250



 Score = 31.6 bits (70), Expect(2) = 6e-06
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 14/71 (19%)
 Frame = +2

Query: 131 PTSLLKFQLPNALLLTRSNYNIWSQTIETLLD---VNGLLNIVTKTP-PTIKNN------ 280
           P ++      N   LT +NY +WS  I  LLD   + G L+   +TP PT+  N      
Sbjct: 20  PQTIFNINTSNVTKLTSNNYLMWSLQIHALLDGYELAGHLDGSIETPAPTLTTNNVVSAN 79

Query: 281 ----VWMKKDR 301
               +W ++DR
Sbjct: 80  PQYTLWKRQDR 90


>XP_015167893.1 PREDICTED: uncharacterized protein LOC107062130 [Solanum tuberosum]
          Length = 332

 Score = 53.1 bits (126), Expect(2) = 8e-06
 Identities = 44/133 (33%), Positives = 61/133 (45%), Gaps = 2/133 (1%)
 Frame = +3

Query: 330 SPNIHGLIQSEKFSDGIWMKLKNILAKNSVAATATLRRKLHNLNFPENGNIAELIEDTYE 509
           S NI   +   K S  +W  L    AK S A   +LR  L NL    N +I   ++   +
Sbjct: 114 SYNIVPFVIYAKSSYALWQNLTGTYAKPSRARIMSLRESLSNLK-KGNLSITSYLQKIKQ 172

Query: 510 IRDQLDRSGEPAKEDELFYAILEALPEEWDNYKDNLLLLKTNITFDELCQALIHNLKN-- 683
           I   L  +G     DELF   L  LP E+D     L   +T +TF+EL + L+   +N  
Sbjct: 173 ICSTLACAGIQISMDELFLHALHGLPAEYDTITAALRARETPVTFEELHEKLLDFEQNLI 232

Query: 684 RTKSSVEIWNTAN 722
           R+ SS  +  TAN
Sbjct: 233 RSSSSTTVPITAN 245



 Score = 25.8 bits (55), Expect(2) = 8e-06
 Identities = 13/56 (23%), Positives = 25/56 (44%)
 Frame = +2

Query: 167 LLLTRSNYNIWSQTIETLLDVNGLLNIVTKTPPTIKNNVWMKKDRHARAFLKLSVT 334
           L L  +NY  W    ET+L     L+ + + P +       ++D   R+ +  S++
Sbjct: 46  LKLDNTNYQSWRYQWETILTAYDFLHFIEQPPSSTATPFHQRQDHLIRSAIVASLS 101