BLASTX nr result
ID: Ephedra29_contig00013073
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00013073
(303 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_006476892.1 PREDICTED: pentatricopeptide repeat-containing pr... 69 2e-11
KDO69474.1 hypothetical protein CISIN_1g037477mg [Citrus sinensis] 68 3e-11
XP_006439927.1 hypothetical protein CICLE_v10019266mg [Citrus cl... 68 3e-11
KVH98184.1 Pentatricopeptide repeat-containing protein [Cynara c... 67 7e-11
XP_019243615.1 PREDICTED: pentatricopeptide repeat-containing pr... 66 1e-10
XP_016494923.1 PREDICTED: pentatricopeptide repeat-containing pr... 66 1e-10
XP_009782591.1 PREDICTED: pentatricopeptide repeat-containing pr... 66 1e-10
XP_017634939.1 PREDICTED: pentatricopeptide repeat-containing pr... 65 3e-10
XP_016708622.1 PREDICTED: pentatricopeptide repeat-containing pr... 65 3e-10
XP_012489078.1 PREDICTED: pentatricopeptide repeat-containing pr... 65 3e-10
EPS62186.1 hypothetical protein M569_12607 [Genlisea aurea] 65 5e-10
XP_015067761.1 PREDICTED: pentatricopeptide repeat-containing pr... 65 5e-10
XP_006344474.1 PREDICTED: pentatricopeptide repeat-containing pr... 65 5e-10
XP_004236267.1 PREDICTED: pentatricopeptide repeat-containing pr... 65 5e-10
GAV65137.1 PPR domain-containing protein/PPR_1 domain-containing... 64 6e-10
XP_009415085.1 PREDICTED: pentatricopeptide repeat-containing pr... 64 6e-10
XP_002321639.2 pentatricopeptide repeat-containing family protei... 64 9e-10
ONK58743.1 uncharacterized protein A4U43_C09F16200 [Asparagus of... 64 9e-10
XP_013695394.1 PREDICTED: pentatricopeptide repeat-containing pr... 63 1e-09
XP_020110896.1 pentatricopeptide repeat-containing protein At3g4... 64 1e-09
>XP_006476892.1 PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Citrus sinensis]
Length = 639
Score = 68.9 bits (167), Expect = 2e-11
Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
Frame = -2
Query: 302 EDMGRLFLWMFEDGKNECTVAKCCQVL--VGNGSGDASGVVEEVLNXXXXD--SMKKMVY 135
ED +LF +M DG + +V C +L + + + G+V V N S+ K VY
Sbjct: 318 EDAVKLFEFMM-DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
Query: 134 DGLHRCLTKDGRLEEAQKVMDAMMEEGYVTDNKTYGHLVYGLC 6
DG+HR LTK GR +EA+K+M AM G+ DN TY +++GLC
Sbjct: 377 DGIHRALTKLGRFDEAEKIMKAMKNAGFEPDNITYSQVIFGLC 419
>KDO69474.1 hypothetical protein CISIN_1g037477mg [Citrus sinensis]
Length = 639
Score = 68.2 bits (165), Expect = 3e-11
Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
Frame = -2
Query: 302 EDMGRLFLWMFEDGKNECTVAKCCQVL--VGNGSGDASGVVEEVLNXXXXD--SMKKMVY 135
ED +LF +M DG + +V C +L + + + G+V V N S+ K VY
Sbjct: 318 EDAVKLFEFMM-DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
Query: 134 DGLHRCLTKDGRLEEAQKVMDAMMEEGYVTDNKTYGHLVYGLC 6
DG+HR LTK GR +EA+K+M AM G+ DN TY +++GLC
Sbjct: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
>XP_006439927.1 hypothetical protein CICLE_v10019266mg [Citrus clementina]
ESR53167.1 hypothetical protein CICLE_v10019266mg
[Citrus clementina]
Length = 639
Score = 68.2 bits (165), Expect = 3e-11
Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 4/103 (3%)
Frame = -2
Query: 302 EDMGRLFLWMFEDGKNECTVAKCCQVL--VGNGSGDASGVVEEVLNXXXXD--SMKKMVY 135
ED +LF +M DG + +V C +L + + + G+V V N S+ K VY
Sbjct: 318 EDAVKLFEFMM-DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
Query: 134 DGLHRCLTKDGRLEEAQKVMDAMMEEGYVTDNKTYGHLVYGLC 6
DG+HR LTK GR +EA+K+M AM G+ DN TY +++GLC
Sbjct: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
>KVH98184.1 Pentatricopeptide repeat-containing protein [Cynara cardunculus
var. scolymus]
Length = 628
Score = 67.0 bits (162), Expect = 7e-11
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Frame = -2
Query: 266 DGKNECTVAKCCQVL---VGNGSGDASGVVEEVLNXXXXD--SMKKMVYDGLHRCLTKDG 102
D + ++ C Q+L GN S D +V V+N S+ K VYDG+HR LT G
Sbjct: 329 DSPYKPSIQDCSQLLRNIAGNRSPDLD-LVFRVVNKFKETGNSLSKSVYDGIHRSLTSVG 387
Query: 101 RLEEAQKVMDAMMEEGYVTDNKTYGHLVYGLC 6
+ +EA+K+M AM E GY DN TY L++GLC
Sbjct: 388 QFDEAEKMMTAMKEAGYEPDNITYSQLIFGLC 419
>XP_019243615.1 PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Nicotiana attenuata] XP_019243616.1
PREDICTED: pentatricopeptide repeat-containing protein
At3g48250, chloroplastic [Nicotiana attenuata]
OIT04845.1 pentatricopeptide repeat-containing protein,
chloroplastic [Nicotiana attenuata]
Length = 642
Score = 66.2 bits (160), Expect = 1e-10
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = -2
Query: 155 SMKKMVYDGLHRCLTKDGRLEEAQKVMDAMMEEGYVTDNKTYGHLVYGLC 6
S K++YD +HRCLT GR EEA+K+ +AM + GY DN TY L+YGLC
Sbjct: 371 SRSKIIYDVIHRCLTNLGRFEEAEKITEAMRDAGYEPDNITYSQLIYGLC 420
>XP_016494923.1 PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Nicotiana tabacum]
Length = 642
Score = 66.2 bits (160), Expect = 1e-10
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = -2
Query: 155 SMKKMVYDGLHRCLTKDGRLEEAQKVMDAMMEEGYVTDNKTYGHLVYGLC 6
S K++YD +HRCLT GR EEA+K+ +AM + GY DN TY L+YGLC
Sbjct: 371 SRSKIIYDVIHRCLTNLGRFEEAEKITEAMRDAGYEPDNITYSQLIYGLC 420
>XP_009782591.1 PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Nicotiana sylvestris]
Length = 642
Score = 66.2 bits (160), Expect = 1e-10
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = -2
Query: 155 SMKKMVYDGLHRCLTKDGRLEEAQKVMDAMMEEGYVTDNKTYGHLVYGLC 6
S K++YD +HRCLT GR EEA+K+ +AM + GY DN TY L+YGLC
Sbjct: 371 SRSKIIYDVIHRCLTNLGRFEEAEKITEAMRDAGYEPDNITYSQLIYGLC 420
>XP_017634939.1 PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Gossypium arboreum]
Length = 620
Score = 65.1 bits (157), Expect = 3e-10
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Frame = -2
Query: 302 EDMGRLFLWMFEDGKNECTVAKCCQVL--VGNGSGDASGVVEEVLNXXXXD--SMKKMVY 135
ED +L+ M DG + + C +L + G +V V+N S+ K +Y
Sbjct: 313 EDAVKLYEIMM-DGPYKPSAQDCSLLLRSISGADGQDLSLVFRVVNKYEAAGYSLSKAIY 371
Query: 134 DGLHRCLTKDGRLEEAQKVMDAMMEEGYVTDNKTYGHLVYGLC 6
DG+HR LTK G+ +EA+K+M AM G DN TY LV+GLC
Sbjct: 372 DGIHRSLTKAGKFDEAEKIMKAMKNAGCEPDNITYSQLVFGLC 414
>XP_016708622.1 PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Gossypium hirsutum]
Length = 620
Score = 65.1 bits (157), Expect = 3e-10
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Frame = -2
Query: 302 EDMGRLFLWMFEDGKNECTVAKCCQVL--VGNGSGDASGVVEEVLNXXXXD--SMKKMVY 135
ED +L+ M DG + + C +L + G +V V+N S+ K +Y
Sbjct: 313 EDAVKLYEIMM-DGPYKPSAQDCSLLLRSISGADGQDLSLVFRVVNKYEAAGYSLSKAIY 371
Query: 134 DGLHRCLTKDGRLEEAQKVMDAMMEEGYVTDNKTYGHLVYGLC 6
DG+HR LTK G+ +EA+K+M AM G DN TY LV+GLC
Sbjct: 372 DGIHRSLTKAGKFDEAEKIMKAMKNAGCEPDNITYSQLVFGLC 414
>XP_012489078.1 PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Gossypium raimondii] KJB40098.1
hypothetical protein B456_007G046800 [Gossypium
raimondii]
Length = 620
Score = 65.1 bits (157), Expect = 3e-10
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Frame = -2
Query: 302 EDMGRLFLWMFEDGKNECTVAKCCQVL--VGNGSGDASGVVEEVLNXXXXD--SMKKMVY 135
ED +L+ M DG + + C +L + + G +V V+N S+ K +Y
Sbjct: 313 EDAVKLYEIMM-DGPYKPSAQDCSLLLRSISSADGQDLSLVFRVVNKYEAAGYSLSKAIY 371
Query: 134 DGLHRCLTKDGRLEEAQKVMDAMMEEGYVTDNKTYGHLVYGLC 6
DG+HR LTK G+ +EA+K+M AM G DN TY LV+GLC
Sbjct: 372 DGIHRSLTKVGKFDEAEKIMKAMKNAGCEPDNITYSQLVFGLC 414
>EPS62186.1 hypothetical protein M569_12607 [Genlisea aurea]
Length = 627
Score = 64.7 bits (156), Expect = 5e-10
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 15/105 (14%)
Frame = -2
Query: 275 MFEDGKN----------ECTVAKC---CQVLVGNGSGDASGVVEEVLNXXXXD--SMKKM 141
MFEDG + +V++C Q L +GS D G+++ V+ S+ K
Sbjct: 319 MFEDGVKLYEHMMDSPYKPSVSECNYLLQALSRHGSPDL-GLIDRVIEKFVAGGNSLSKT 377
Query: 140 VYDGLHRCLTKDGRLEEAQKVMDAMMEEGYVTDNKTYGHLVYGLC 6
+YDG+HR LT+ G+ EEA+ +++ M E G+ DN TY LV+GLC
Sbjct: 378 LYDGIHRSLTRLGKFEEAEGIVEKMRENGFEPDNVTYSQLVFGLC 422
>XP_015067761.1 PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Solanum pennellii]
Length = 642
Score = 64.7 bits (156), Expect = 5e-10
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = -2
Query: 155 SMKKMVYDGLHRCLTKDGRLEEAQKVMDAMMEEGYVTDNKTYGHLVYGLC 6
S K++YD +HRCLT GR EEA+K+ +AM + G+ DN TY L+YGLC
Sbjct: 371 SRSKIIYDVIHRCLTNLGRFEEAEKITEAMRDAGFEPDNITYSQLIYGLC 420
>XP_006344474.1 PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Solanum tuberosum]
Length = 642
Score = 64.7 bits (156), Expect = 5e-10
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = -2
Query: 155 SMKKMVYDGLHRCLTKDGRLEEAQKVMDAMMEEGYVTDNKTYGHLVYGLC 6
S K++YD +HRCLT GR EEA+K+ +AM + G+ DN TY L+YGLC
Sbjct: 371 SRSKIIYDVIHRCLTNLGRFEEAEKITEAMRDAGFEPDNITYSQLIYGLC 420
>XP_004236267.1 PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Solanum lycopersicum] XP_010319018.1
PREDICTED: pentatricopeptide repeat-containing protein
At3g48250, chloroplastic [Solanum lycopersicum]
XP_010319019.1 PREDICTED: pentatricopeptide
repeat-containing protein At3g48250, chloroplastic
[Solanum lycopersicum]
Length = 642
Score = 64.7 bits (156), Expect = 5e-10
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = -2
Query: 155 SMKKMVYDGLHRCLTKDGRLEEAQKVMDAMMEEGYVTDNKTYGHLVYGLC 6
S K++YD +HRCLT GR EEA+K+ +AM + G+ DN TY L+YGLC
Sbjct: 371 SRSKIIYDVIHRCLTNLGRFEEAEKITEAMRDAGFEPDNITYSQLIYGLC 420
>GAV65137.1 PPR domain-containing protein/PPR_1 domain-containing protein
[Cephalotus follicularis]
Length = 538
Score = 64.3 bits (155), Expect = 6e-10
Identities = 42/103 (40%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Frame = -2
Query: 302 EDMGRLFLWMFEDGKNECTVAKCCQVLVGNGSGDAS--GVVEEVLNXXXXD--SMKKMVY 135
ED +L+ M DG + +V C +L G GD +V V N S+ K VY
Sbjct: 226 EDAVKLYELMM-DGPYKPSVQDCSILLRGISVGDNPDMNLVFRVANKYVAMGQSLSKAVY 284
Query: 134 DGLHRCLTKDGRLEEAQKVMDAMMEEGYVTDNKTYGHLVYGLC 6
DG+HR LT GR +EA +M M GY DN TY LV+GLC
Sbjct: 285 DGIHRSLTSVGRFDEATAIMKVMRNAGYEPDNITYSQLVFGLC 327
>XP_009415085.1 PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Musa acuminata subsp. malaccensis]
Length = 597
Score = 64.3 bits (155), Expect = 6e-10
Identities = 27/50 (54%), Positives = 37/50 (74%)
Frame = -2
Query: 155 SMKKMVYDGLHRCLTKDGRLEEAQKVMDAMMEEGYVTDNKTYGHLVYGLC 6
S+ K+VYDG+HR LT +G+ +EA++++ M EGY DN TY LVYGLC
Sbjct: 338 SLSKVVYDGIHRSLTSNGKFDEAEEILKKMRLEGYEPDNITYSQLVYGLC 387
>XP_002321639.2 pentatricopeptide repeat-containing family protein [Populus
trichocarpa] EEF05766.2 pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
Length = 486
Score = 63.9 bits (154), Expect = 9e-10
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Frame = -2
Query: 302 EDMGRLFLWMFEDGKNECTVAKCCQVLVGNGSGDASGV--VEEVLNXXXXD--SMKKMVY 135
ED RL+ +M DG + +V C +L + D + V V++ S+ K VY
Sbjct: 174 EDAVRLYEFMM-DGPFKPSVQDCYILLRSVAASDNPDLDLVSRVVDGYKATGNSLSKSVY 232
Query: 134 DGLHRCLTKDGRLEEAQKVMDAMMEEGYVTDNKTYGHLVYGLC 6
DG+HR T G+ +EA+K++ AM + GY DN TY LV+GLC
Sbjct: 233 DGMHRSFTSAGKFDEAEKIVKAMRDAGYEPDNITYSQLVFGLC 275
>ONK58743.1 uncharacterized protein A4U43_C09F16200 [Asparagus officinalis]
Length = 594
Score = 63.9 bits (154), Expect = 9e-10
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = -2
Query: 155 SMKKMVYDGLHRCLTKDGRLEEAQKVMDAMMEEGYVTDNKTYGHLVYGLC 6
S+ K VYDG+HR LT + + EEA++++ M +EGY DN TY LVYGLC
Sbjct: 334 SLSKAVYDGIHRSLTSNAKFEEAEEIIKRMRDEGYEPDNITYSQLVYGLC 383
>XP_013695394.1 PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Brassica napus]
Length = 297
Score = 63.2 bits (152), Expect = 1e-09
Identities = 28/50 (56%), Positives = 35/50 (70%)
Frame = -2
Query: 155 SMKKMVYDGLHRCLTKDGRLEEAQKVMDAMMEEGYVTDNKTYGHLVYGLC 6
S+ K VYDG+HR LT R EEA+++M AM + GY DN TY LV+GLC
Sbjct: 44 SLSKAVYDGIHRSLTSVARFEEAEEIMKAMRDAGYEPDNITYSQLVFGLC 93
>XP_020110896.1 pentatricopeptide repeat-containing protein At3g48250,
chloroplastic [Ananas comosus]
Length = 502
Score = 63.5 bits (153), Expect = 1e-09
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = -2
Query: 155 SMKKMVYDGLHRCLTKDGRLEEAQKVMDAMMEEGYVTDNKTYGHLVYGLC 6
S+ K VYDG+HR LT +GR EA+++++ M EG+ DN TY LVYGLC
Sbjct: 243 SLSKAVYDGIHRSLTSNGRFGEAEEIVEKMRSEGFEPDNITYSQLVYGLC 292