BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00012768
         (547 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_020089659.1 probable RNA-dependent RNA polymerase 1 [Ananas c...    59   9e-07
OAY79234.1 RNA-dependent RNA polymerase 1, partial [Ananas comosus]    59   9e-07

>XP_020089659.1 probable RNA-dependent RNA polymerase 1 [Ananas comosus]
           XP_020089661.1 probable RNA-dependent RNA polymerase 1
           [Ananas comosus]
          Length = 1133

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/58 (46%), Positives = 37/58 (63%)
 Frame = -1

Query: 187 KCTLHMCCPIAEYAFCVLHSTTEVLVDLETNSRKICMYLQDNSGEYKLELSYTDTWYV 14
           + TLH  CP+++ +FCVL S ++V V+   N RKI  +L   S EYKLELSY   W +
Sbjct: 103 RATLHFGCPVSKRSFCVLWSASDVHVNFGFNLRKIYFFLSKGSFEYKLELSYESIWEI 160


>OAY79234.1 RNA-dependent RNA polymerase 1, partial [Ananas comosus]
          Length = 3431

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/58 (46%), Positives = 37/58 (63%)
 Frame = -1

Query: 187  KCTLHMCCPIAEYAFCVLHSTTEVLVDLETNSRKICMYLQDNSGEYKLELSYTDTWYV 14
            + TLH  CP+++ +FCVL S ++V V+   N RKI  +L   S EYKLELSY   W +
Sbjct: 2383 RATLHFGCPVSKRSFCVLWSASDVHVNFGFNLRKIYFFLSKGSFEYKLELSYESIWEI 2440



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 26/56 (46%), Positives = 35/56 (62%)
 Frame = -1

Query: 181  TLHMCCPIAEYAFCVLHSTTEVLVDLETNSRKICMYLQDNSGEYKLELSYTDTWYV 14
            TLH  CP+ + +FCVL S ++V V+   N RKI  ++   S EYKLELSY   W +
Sbjct: 1253 TLHFGCPVLKRSFCVLWSASDVRVNFGFNLRKIYFFVSKGSFEYKLELSYESIWEI 1308