BLASTX nr result

ID: Ephedra29_contig00012591 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ephedra29_contig00012591
         (215 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KVH90576.1 AARP2CN-like protein [Cynara cardunculus var. scolymus]     54   7e-07
XP_019413320.1 PREDICTED: ribosome biogenesis protein BMS1 homol...    53   3e-06
XP_010242134.1 PREDICTED: ribosome biogenesis protein BMS1 homol...    53   3e-06
XP_009371488.1 PREDICTED: ribosome biogenesis protein BMS1 homol...    51   9e-06
XP_018506287.1 PREDICTED: ribosome biogenesis protein BMS1 homol...    51   9e-06

>KVH90576.1 AARP2CN-like protein [Cynara cardunculus var. scolymus]
          Length = 1200

 Score = 54.3 bits (129), Expect = 7e-07
 Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
 Frame = +3

Query: 24  EDEGSSEELNDH-DFXXXXXXXXXXXXLGNASEWKEGLVSRTVSRQRLNLMHLVYGNSNT 200
           ED+ S EE + + D             +GNAS+WKE LV RT+SRQ +NLM LVYG S +
Sbjct: 576 EDDNSDEESSSYSDSSGEEEEDDLEENVGNASKWKESLVERTISRQNMNLMQLVYGQSES 635


>XP_019413320.1 PREDICTED: ribosome biogenesis protein BMS1 homolog isoform X2
           [Lupinus angustifolius]
          Length = 1194

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 28/69 (40%), Positives = 38/69 (55%)
 Frame = +3

Query: 3   ECSEADREDEGSSEELNDHDFXXXXXXXXXXXXLGNASEWKEGLVSRTVSRQRLNLMHLV 182
           E SE   ED+ S ++ +D+D             +GN S+WKE L  RT+SR+  +LM LV
Sbjct: 529 ESSEEAEEDDNSDDDKDDYD-------------MGNVSKWKESLAERTLSRKTPSLMQLV 575

Query: 183 YGNSNTGST 209
           YG S   ST
Sbjct: 576 YGESTVNST 584


>XP_010242134.1 PREDICTED: ribosome biogenesis protein BMS1 homolog [Nelumbo
           nucifera]
          Length = 1225

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 30/71 (42%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
 Frame = +3

Query: 3   ECSEADREDEGSSEELNDHDFXXXXXXXXXXXX--LGNASEWKEGLVSRTVSRQRLNLMH 176
           E  + D ED+  S+   + DF              +GNAS+WKE L+ RTV RQ  NLM 
Sbjct: 546 EDEDEDNEDDTDSQSSAESDFLEEGKEDDISGDDEMGNASKWKESLMERTVLRQTTNLMQ 605

Query: 177 LVYGNSNTGST 209
           LVYG S   ST
Sbjct: 606 LVYGKSTLKST 616


>XP_009371488.1 PREDICTED: ribosome biogenesis protein BMS1 homolog isoform X2
           [Pyrus x bretschneideri]
          Length = 1208

 Score = 51.2 bits (121), Expect = 9e-06
 Identities = 28/67 (41%), Positives = 36/67 (53%)
 Frame = +3

Query: 9   SEADREDEGSSEELNDHDFXXXXXXXXXXXXLGNASEWKEGLVSRTVSRQRLNLMHLVYG 188
           S+     E S+EE +DH+              GN ++WKE LV R  SRQ +NLMHLVYG
Sbjct: 538 SQESSGSESSAEEEDDHE----------TDETGNIAKWKESLVQRASSRQTINLMHLVYG 587

Query: 189 NSNTGST 209
            S +  T
Sbjct: 588 KSTSMPT 594


>XP_018506287.1 PREDICTED: ribosome biogenesis protein BMS1 homolog isoform X1
           [Pyrus x bretschneideri]
          Length = 1209

 Score = 51.2 bits (121), Expect = 9e-06
 Identities = 28/67 (41%), Positives = 36/67 (53%)
 Frame = +3

Query: 9   SEADREDEGSSEELNDHDFXXXXXXXXXXXXLGNASEWKEGLVSRTVSRQRLNLMHLVYG 188
           S+     E S+EE +DH+              GN ++WKE LV R  SRQ +NLMHLVYG
Sbjct: 538 SQESSGSESSAEEEDDHE---------TGDETGNIAKWKESLVQRASSRQTINLMHLVYG 588

Query: 189 NSNTGST 209
            S +  T
Sbjct: 589 KSTSMPT 595


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