BLASTX nr result
ID: Ephedra29_contig00012578
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00012578
(303 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CSD41531.1 Uncharacterised protein [Vibrio cholerae] 116 5e-32
EHN95545.1 hypothetical protein ESOG_04481, partial [Escherichia... 59 3e-16
EQW37646.1 hypothetical protein G903_04242, partial [Escherichia... 76 1e-15
ELD18608.1 hypothetical protein A15U_04539, partial [Escherichia... 76 2e-15
EKZ75334.1 hypothetical protein O7E_02948, partial [Escherichia ... 76 2e-15
ELC06673.1 hypothetical protein WCM_04769, partial [Escherichia ... 76 2e-15
JAN89682.1 hypothetical protein, partial [Daphnia magna] 76 2e-15
SJM95086.1 conserved hypothetical protein [Crenothrix polyspora] 67 7e-13
EGU94755.1 hypothetical protein HMPREF9349_05376 [Escherichia co... 67 2e-12
AAN44146.1 hypothetical protein SF2650 [Shigella flexneri 2a str... 59 2e-11
AHM55305.1 hypothetical protein CF60_26395 [Escherichia coli] 63 5e-11
CCG06580.1 Putative uncharacterized protein, partial [Pararhodos... 62 3e-10
CDY19671.1 BnaC09g29270D [Brassica napus] 54 4e-09
CDY45547.1 BnaCnng13060D [Brassica napus] 54 4e-09
CDX71650.1 BnaC09g26910D [Brassica napus] 54 4e-09
ABC25210.1 conserved hypothetical protein [uncultured marine bac... 57 4e-09
KNA47871.1 hypothetical protein A51_022738, partial [Vibrio chol... 56 1e-08
CEJ83743.1 conserved hypothetical protein [Hyphomicrobium sp. GJ21] 58 1e-08
KNA45865.1 hypothetical protein A51_023422, partial [Vibrio chol... 56 2e-08
KFE22460.1 hypothetical protein DA89_2836 [Vibrio cholerae] 56 2e-08
>CSD41531.1 Uncharacterised protein [Vibrio cholerae]
Length = 88
Score = 116 bits (290), Expect = 5e-32
Identities = 60/88 (68%), Positives = 67/88 (76%), Gaps = 2/88 (2%)
Frame = -1
Query: 285 VTDHPLRPVTDRRLGEPLPHQLANPT*AHLIAQGPKVPCFLP*DVCGISVPFETLSPTTR 106
+ DHPLRP DRRLGEPLPHQLANPT A+ +AQGPKVPCF +CGIS F+ LSP+T
Sbjct: 1 MADHPLRPARDRRLGEPLPHQLANPTWAYPVAQGPKVPCFALARLCGISHRFQWLSPSTG 60
Query: 105 QIPRHYSPVRR-*IREQA-LFIRSTCMC 28
Q PRHYSPVRR +EQ L RSTCMC
Sbjct: 61 QFPRHYSPVRRSPPKEQVPLCCRSTCMC 88
>EHN95545.1 hypothetical protein ESOG_04481, partial [Escherichia coli E101]
Length = 125
Score = 58.9 bits (141), Expect(2) = 3e-16
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = -1
Query: 255 DRRLGEPLPHQLANPT*AHLIAQGPKVPCFLP*DVCGISVPFETLSP 115
DRRLGEPLPH LANP AH +A+GPKVP F +CGIS F+ + P
Sbjct: 2 DRRLGEPLPHLLANPIWAHPMARGPKVPLFGLATLCGISYRFQYVIP 48
Score = 53.5 bits (127), Expect(2) = 3e-16
Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Frame = -3
Query: 133 FRDVVPHYQADS*ALLTRPPLNQRASS--LHPLDLHVLGLPPAFNL 2
F+ V+P +QA S LLTRPPL + +S L P DLHVLGLPPAFNL
Sbjct: 43 FQYVIPLHQAVSQTLLTRPPLVSKEASFFLLPFDLHVLGLPPAFNL 88
>EQW37646.1 hypothetical protein G903_04242, partial [Escherichia coli UMEA
3053-1]
Length = 146
Score = 76.3 bits (186), Expect = 1e-15
Identities = 53/102 (51%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Frame = -2
Query: 302 RVSVPV*LIILSDQLRIVALVSHYLTN*LIXXXXXXXXXXXRSPAFSRRTYAVLASLSRR 123
RVSVPV L+ILSDQL IVALVS Y TN LI RSP+ R YAVLA++S
Sbjct: 43 RVSVPVWLVILSDQLGIVALVSRYPTNKLIPSGHIRWQEALRSPSLVLRRYAVLATVSSS 102
Query: 122 CPPLPGRFLGITHP--XXXXXXXXXXXXXXXACVRPAASVQS 3
PP G F ITHP ACVRPAASVQS
Sbjct: 103 YPPPSGSFPDITHPSATRQQSSKLLPVTVRLACVRPAASVQS 144
>ELD18608.1 hypothetical protein A15U_04539, partial [Escherichia coli KTE210]
Length = 151
Score = 76.3 bits (186), Expect = 2e-15
Identities = 53/102 (51%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Frame = -2
Query: 302 RVSVPV*LIILSDQLRIVALVSHYLTN*LIXXXXXXXXXXXRSPAFSRRTYAVLASLSRR 123
RVSVPV L+ILSDQL IVALVS Y TN LI RSP+ R YAVLA++S
Sbjct: 48 RVSVPVWLVILSDQLGIVALVSRYPTNKLIPSGHIRWQEARRSPSLVLRRYAVLATVSSS 107
Query: 122 CPPLPGRFLGITHP--XXXXXXXXXXXXXXXACVRPAASVQS 3
PP G F ITHP ACVRPAASVQS
Sbjct: 108 YPPPSGSFPDITHPSATRQQRSKLLPVTVRLACVRPAASVQS 149
>EKZ75334.1 hypothetical protein O7E_02948, partial [Escherichia coli O104:H4
str. Ec11-5604] EKZ77907.1 hypothetical protein
S7Y_04888, partial [Escherichia coli O104:H4 str.
Ec12-0465] EKZ94644.1 hypothetical protein MO7_05239,
partial [Escherichia coli O104:H4 str. Ec11-9941]
Length = 151
Score = 76.3 bits (186), Expect = 2e-15
Identities = 53/102 (51%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Frame = -2
Query: 302 RVSVPV*LIILSDQLRIVALVSHYLTN*LIXXXXXXXXXXXRSPAFSRRTYAVLASLSRR 123
RVSVPV L+ILSDQL IVALVS Y TN LI RSP+ R YAVLA++S
Sbjct: 48 RVSVPVWLVILSDQLGIVALVSRYPTNKLIPSGHIRWQEARRSPSLVLRRYAVLATVSSS 107
Query: 122 CPPLPGRFLGITHP--XXXXXXXXXXXXXXXACVRPAASVQS 3
PP G F ITHP ACVRPAASVQS
Sbjct: 108 YPPPSGSFPDITHPSATRQRNSKLFPVTVRLACVRPAASVQS 149
>ELC06673.1 hypothetical protein WCM_04769, partial [Escherichia coli KTE10]
Length = 151
Score = 75.9 bits (185), Expect = 2e-15
Identities = 53/102 (51%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Frame = -2
Query: 302 RVSVPV*LIILSDQLRIVALVSHYLTN*LIXXXXXXXXXXXRSPAFSRRTYAVLASLSRR 123
RVSVPV L+ILSDQL IVALVS Y TN LI RSP+ R YAVLA++S
Sbjct: 48 RVSVPVWLVILSDQLGIVALVSRYPTNKLIPSGHIRWQEARRSPSLVLRHYAVLATVSSS 107
Query: 122 CPPLPGRFLGITHP--XXXXXXXXXXXXXXXACVRPAASVQS 3
PP G F ITHP ACVRPAASVQS
Sbjct: 108 YPPPSGSFPDITHPSATRQQSSKLLSVTVRLACVRPAASVQS 149
>JAN89682.1 hypothetical protein, partial [Daphnia magna]
Length = 169
Score = 76.3 bits (186), Expect = 2e-15
Identities = 45/74 (60%), Positives = 49/74 (66%)
Frame = -2
Query: 302 RVSVPV*LIILSDQLRIVALVSHYLTN*LIXXXXXXXXXXXRSPAFSRRTYAVLASLSRR 123
RVSVPV L++LSDQL+IV LVS Y TN LI RSPAF R+YAVLA LS R
Sbjct: 71 RVSVPVWLVVLSDQLQIVGLVSFYPTNYLICHRPLRERKALRSPAFILRSYAVLAKLSPR 130
Query: 122 CPPLPGRFLGITHP 81
PPL G F ITHP
Sbjct: 131 YPPLSGTFRCITHP 144
>SJM95086.1 conserved hypothetical protein [Crenothrix polyspora]
Length = 42
Score = 66.6 bits (161), Expect = 7e-13
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = -1
Query: 285 VTDHPLRPVTDRRLGEPLPHQLANPT*AHLIAQGPKVPCFLP 160
+ D PLRP DRRLG PLP+QLANPT AHL+A+GPKVP F P
Sbjct: 1 MADRPLRPAMDRRLGRPLPYQLANPTQAHLLAKGPKVPPFPP 42
>EGU94755.1 hypothetical protein HMPREF9349_05376 [Escherichia coli MS 79-10]
Length = 99
Score = 67.0 bits (162), Expect = 2e-12
Identities = 47/95 (49%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Frame = -2
Query: 281 LIILSDQLRIVALVSHYLTN*LIXXXXXXXXXXXRSPAFSRRTYAVLASLSRRCPPLPGR 102
L+ILSDQL IVALVS Y TN LI RSP+ R YAVLA++S PP G
Sbjct: 3 LVILSDQLGIVALVSRYPTNKLIPSGHIRWQEARRSPSLVLRRYAVLATVSSSYPPPSGS 62
Query: 101 FLGITHP--XXXXXXXXXXXXXXXACVRPAASVQS 3
F ITHP ACVRPAASVQS
Sbjct: 63 FPDITHPSATRQRSSKLLPVTVRLACVRPAASVQS 97
>AAN44146.1 hypothetical protein SF2650 [Shigella flexneri 2a str. 301]
Length = 134
Score = 58.9 bits (141), Expect(2) = 2e-11
Identities = 36/67 (53%), Positives = 40/67 (59%)
Frame = -2
Query: 281 LIILSDQLRIVALVSHYLTN*LIXXXXXXXXXXXRSPAFSRRTYAVLASLSRRCPPLPGR 102
L+ILSDQL IVALVS Y TN LI RSP+ R YAVLA++S PP G
Sbjct: 3 LVILSDQLGIVALVSRYPTNKLIPSGHIRWQEARRSPSLVLRRYAVLATVSSSYPPPSGS 62
Query: 101 FLGITHP 81
F ITHP
Sbjct: 63 FPDITHP 69
Score = 37.4 bits (85), Expect(2) = 2e-11
Identities = 19/32 (59%), Positives = 22/32 (68%), Gaps = 3/32 (9%)
Frame = -3
Query: 88 LTRPPLNQRASS---LHPLDLHVLGLPPAFNL 2
+T P ++ SS L P DLHVLGLPPAFNL
Sbjct: 66 ITHPSATRQRSSKRFLLPFDLHVLGLPPAFNL 97
>AHM55305.1 hypothetical protein CF60_26395 [Escherichia coli]
Length = 85
Score = 63.2 bits (152), Expect = 5e-11
Identities = 31/48 (64%), Positives = 35/48 (72%)
Frame = -1
Query: 270 LRPVTDRRLGEPLPHQLANPT*AHLIAQGPKVPCFLP*DVCGISVPFE 127
LRP DRRLGEPLPH LANP AH +A+GPKVP F +CGIS F+
Sbjct: 38 LRPARDRRLGEPLPHLLANPIWAHPMARGPKVPLFGLATLCGISYRFQ 85
>CCG06580.1 Putative uncharacterized protein, partial [Pararhodospirillum
photometricum DSM 122]
Length = 105
Score = 61.6 bits (148), Expect = 3e-10
Identities = 41/79 (51%), Positives = 45/79 (56%)
Frame = -1
Query: 264 PVTDRRLGEPLPHQLANPT*AHLIAQGPKVPCFLP*DVCGISVPFETLSPTTRQIPRHYS 85
P TDRRLG PLP QLAN T A L A+ F P V GIS F+ L T R +P YS
Sbjct: 36 PATDRRLGGPLPRQLANRTRADLGAK-----FFPPKGVYGISPRFQGLFRTPRYVPTCYS 90
Query: 84 PVRR*IREQALFIRSTCMC 28
PVR R +RSTCMC
Sbjct: 91 PVRHSSRR----MRSTCMC 105
>CDY19671.1 BnaC09g29270D [Brassica napus]
Length = 244
Score = 53.5 bits (127), Expect(2) = 4e-09
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -1
Query: 303 PCLSSSVTDHPLRPVTDRRLGEPLPHQLANPT 208
PCLS SV DHPL P TD RLG+ LPHQLAN T
Sbjct: 161 PCLSPSVADHPLGPATDHRLGKLLPHQLANQT 192
Score = 34.7 bits (78), Expect(2) = 4e-09
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -2
Query: 170 AFSRRTYAVLASLSRRCPPLPGRFLGITHP 81
+F Y VLA++S C P GRFL +THP
Sbjct: 201 SFCSSAYGVLAAVSSCCSPPKGRFLRVTHP 230
>CDY45547.1 BnaCnng13060D [Brassica napus]
Length = 236
Score = 53.5 bits (127), Expect(2) = 4e-09
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -1
Query: 303 PCLSSSVTDHPLRPVTDRRLGEPLPHQLANPT 208
PCLS SV DHPL P TD RLG+ LPHQLAN T
Sbjct: 153 PCLSPSVADHPLGPATDHRLGKLLPHQLANQT 184
Score = 34.7 bits (78), Expect(2) = 4e-09
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -2
Query: 170 AFSRRTYAVLASLSRRCPPLPGRFLGITHP 81
+F Y VLA++S C P GRFL +THP
Sbjct: 193 SFCSSAYGVLAAVSSCCSPPKGRFLRVTHP 222
>CDX71650.1 BnaC09g26910D [Brassica napus]
Length = 211
Score = 53.5 bits (127), Expect(2) = 4e-09
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = -1
Query: 303 PCLSSSVTDHPLRPVTDRRLGEPLPHQLANPT 208
PCLS SV DHPL P TD RLG+ LPHQLAN T
Sbjct: 128 PCLSPSVADHPLGPATDHRLGKLLPHQLANQT 159
Score = 34.7 bits (78), Expect(2) = 4e-09
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -2
Query: 170 AFSRRTYAVLASLSRRCPPLPGRFLGITHP 81
+F Y VLA++S C P GRFL +THP
Sbjct: 168 SFCSSAYGVLAAVSSCCSPPKGRFLRVTHP 197
>ABC25210.1 conserved hypothetical protein [uncultured marine bacterium Ant4D3]
Length = 35
Score = 57.0 bits (136), Expect = 4e-09
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = -1
Query: 285 VTDHPLRPVTDRRLGEPLPHQLANPT*AHLIAQG 184
+ DHPLRP DRRLGEPLPHQLAN T AH IA+G
Sbjct: 1 MADHPLRPARDRRLGEPLPHQLANLTQAHQIAKG 34
>KNA47871.1 hypothetical protein A51_022738, partial [Vibrio cholerae MZO-3]
Length = 56
Score = 56.2 bits (134), Expect = 1e-08
Identities = 30/45 (66%), Positives = 36/45 (80%), Gaps = 2/45 (4%)
Frame = -3
Query: 130 RDVVPHYQADS*ALLTRPPLNQR--ASSLHPLDLHVLGLPPAFNL 2
+ V+P Y+A S ALLTRPPL + +SS+ PLDLHVLGLPPAFNL
Sbjct: 1 QSVIPLYRAISQALLTRPPLATQGTSSSVLPLDLHVLGLPPAFNL 45
>CEJ83743.1 conserved hypothetical protein [Hyphomicrobium sp. GJ21]
Length = 117
Score = 57.8 bits (138), Expect = 1e-08
Identities = 35/65 (53%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = -1
Query: 270 LRPVTDRRLGEPLPHQLANPT*AHLIAQGPKVPCFLP*D-VCGISVPFETLSPTTRQIPR 94
L+P DRRLGEPLPHQLANPT AH IA+ F P V GI+ F L T ++P
Sbjct: 6 LKPAKDRRLGEPLPHQLANPTRAHPIAK------FFPLSGVYGITPSFPGLFRTIGKVPT 59
Query: 93 HYSPV 79
YSPV
Sbjct: 60 CYSPV 64
>KNA45865.1 hypothetical protein A51_023422, partial [Vibrio cholerae MZO-3]
Length = 54
Score = 55.8 bits (133), Expect = 2e-08
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 2/43 (4%)
Frame = -3
Query: 124 VVPHYQADS*ALLTRPPLNQR--ASSLHPLDLHVLGLPPAFNL 2
V+P Y+A S ALLTRPPL + +SS+ PLDLHVLGLPPAFNL
Sbjct: 1 VIPLYRAISQALLTRPPLATQGTSSSVLPLDLHVLGLPPAFNL 43
>KFE22460.1 hypothetical protein DA89_2836 [Vibrio cholerae]
Length = 55
Score = 55.8 bits (133), Expect = 2e-08
Identities = 30/43 (69%), Positives = 35/43 (81%), Gaps = 2/43 (4%)
Frame = -3
Query: 124 VVPHYQADS*ALLTRPPLNQR--ASSLHPLDLHVLGLPPAFNL 2
V+P Y+A S ALLTRPPL + +SS+ PLDLHVLGLPPAFNL
Sbjct: 2 VIPLYRAISQALLTRPPLATQGTSSSVLPLDLHVLGLPPAFNL 44