BLASTX nr result
ID: Ephedra29_contig00012156
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ephedra29_contig00012156
(250 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AAX19931.1 viral replicase [Nandina mosaic virus] 137 5e-36
AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 137 5e-36
NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 ... 136 2e-35
BAG12138.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 130 1e-33
BAG12148.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 130 2e-33
BAG12143.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 130 2e-33
AMD78101.1 RdRP [Plantago asiatica mosaic virus] 129 5e-33
BAG12133.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 129 7e-33
BAG12128.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 129 7e-33
BAG12123.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 129 7e-33
AGW45389.1 RNA-dependent RNA polymerase, partial [Plantago asiat... 127 1e-32
ANY93292.1 RdRp [Plantago asiatica mosaic virus] 127 2e-32
AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 127 2e-32
AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 127 2e-32
AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 127 2e-32
CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 127 2e-32
BAG12153.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 127 3e-32
AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosai... 127 3e-32
NP_702988.1 RNA-dependent RNA polymerase [Tulip virus X] BAC1678... 98 6e-22
NP_042695.1 RNA-dependent RNA polymerase [Cassava common mosaic ... 82 3e-16
>AAX19931.1 viral replicase [Nandina mosaic virus]
Length = 1368
Score = 137 bits (346), Expect = 5e-36
Identities = 62/83 (74%), Positives = 71/83 (85%)
Frame = +2
Query: 2 QTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWCPDRARARAF 181
QTDPSTG+ IMPITD R+L +A +P HW+ P K++ TLR+LNRFPT W PDRARARAF
Sbjct: 547 QTDPSTGQPIMPITDTRELPRAIMPAHWDSPQFEKIIATLRNLNRFPTPWSPDRARARAF 606
Query: 182 TSDVKNSRTGKALHRETQTWKET 250
TSDVKNSRTGKALHRE+QTWKET
Sbjct: 607 TSDVKNSRTGKALHRESQTWKET 629
>AMN10083.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 137 bits (346), Expect = 5e-36
Identities = 65/83 (78%), Positives = 69/83 (83%)
Frame = +2
Query: 2 QTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWCPDRARARAF 181
Q DPSTGE+IMPITD RDL +ATLP HW L +LTTLRSLNRFPT W PDR RARAF
Sbjct: 566 QHDPSTGEMIMPITDTRDLPRATLPPHWQGHDLESILTTLRSLNRFPTPWSPDRTRARAF 625
Query: 182 TSDVKNSRTGKALHRETQTWKET 250
TSDVKNSRTGKALHRE+Q WKET
Sbjct: 626 TSDVKNSRTGKALHRESQAWKET 648
>NP_620836.1 replicase [Plantago asiatica mosaic virus] Q07518.1 RecName:
Full=RNA replication protein; AltName: Full=156 kDa
protein; AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase CAA79761.1 156K-protein [Plantago asiatica
mosaic virus]
Length = 1385
Score = 136 bits (342), Expect = 2e-35
Identities = 63/83 (75%), Positives = 71/83 (85%)
Frame = +2
Query: 2 QTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWCPDRARARAF 181
Q DPSTGE+IMPITD ++L +ATLP HW L ++L+TLRSLNRFPT W PDR RARAF
Sbjct: 564 QHDPSTGEMIMPITDTQELPRATLPAHWQGHNLERILSTLRSLNRFPTPWSPDRTRARAF 623
Query: 182 TSDVKNSRTGKALHRETQTWKET 250
TSDVKNSRTGKALHRE+QTWKET
Sbjct: 624 TSDVKNSRTGKALHRESQTWKET 646
>BAG12138.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 130 bits (328), Expect = 1e-33
Identities = 60/83 (72%), Positives = 71/83 (85%)
Frame = +2
Query: 2 QTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWCPDRARARAF 181
QTDPSTGE+IMPITD R+L +A HW P ++++L+TLRSLNR+PT W PDRARA+AF
Sbjct: 559 QTDPSTGEMIMPITDTRELPRADGHAHWQGPDMARILSTLRSLNRYPTPWNPDRARAKAF 618
Query: 182 TSDVKNSRTGKALHRETQTWKET 250
TSDVKNSRTGKALHRE+Q WKET
Sbjct: 619 TSDVKNSRTGKALHRESQVWKET 641
>BAG12148.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 130 bits (327), Expect = 2e-33
Identities = 60/83 (72%), Positives = 70/83 (84%)
Frame = +2
Query: 2 QTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWCPDRARARAF 181
QTDPSTGE+IMPITD R+L +A HW P + ++L+TLRSLNR+PT W PDRARA+AF
Sbjct: 559 QTDPSTGEMIMPITDTRELPRADGHAHWQGPDMERILSTLRSLNRYPTPWNPDRARAKAF 618
Query: 182 TSDVKNSRTGKALHRETQTWKET 250
TSDVKNSRTGKALHRE+Q WKET
Sbjct: 619 TSDVKNSRTGKALHRESQVWKET 641
>BAG12143.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 130 bits (327), Expect = 2e-33
Identities = 60/83 (72%), Positives = 70/83 (84%)
Frame = +2
Query: 2 QTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWCPDRARARAF 181
QTDPSTGE+IMPITD R+L +A HW P + ++L+TLRSLNR+PT W PDRARA+AF
Sbjct: 559 QTDPSTGEMIMPITDTRELPRADGHAHWQGPDMERILSTLRSLNRYPTPWNPDRARAKAF 618
Query: 182 TSDVKNSRTGKALHRETQTWKET 250
TSDVKNSRTGKALHRE+Q WKET
Sbjct: 619 TSDVKNSRTGKALHRESQVWKET 641
>AMD78101.1 RdRP [Plantago asiatica mosaic virus]
Length = 1380
Score = 129 bits (324), Expect = 5e-33
Identities = 57/83 (68%), Positives = 70/83 (84%)
Frame = +2
Query: 2 QTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWCPDRARARAF 181
Q DPSTG +IMPITD ++L +A P HW +P + ++++TLRSLNR+PT W PDR+RARAF
Sbjct: 559 QNDPSTGNMIMPITDTKELPRAIGPAHWQDPDMEQIISTLRSLNRYPTPWNPDRSRARAF 618
Query: 182 TSDVKNSRTGKALHRETQTWKET 250
TSDVKNSRTGKALHRE+Q WKET
Sbjct: 619 TSDVKNSRTGKALHRESQVWKET 641
>BAG12133.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 129 bits (323), Expect = 7e-33
Identities = 59/83 (71%), Positives = 69/83 (83%)
Frame = +2
Query: 2 QTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWCPDRARARAF 181
QTDPSTGE+IMPITD R+L +A HW P + ++L+TLR LNR+PT W PDRARA+AF
Sbjct: 559 QTDPSTGEMIMPITDTRELPRADGHAHWQGPDMERILSTLRGLNRYPTPWNPDRARAKAF 618
Query: 182 TSDVKNSRTGKALHRETQTWKET 250
TSDVKNSRTGKALHRE+Q WKET
Sbjct: 619 TSDVKNSRTGKALHRESQVWKET 641
>BAG12128.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 129 bits (323), Expect = 7e-33
Identities = 59/83 (71%), Positives = 69/83 (83%)
Frame = +2
Query: 2 QTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWCPDRARARAF 181
QTDPSTGE+IMPITD R+L +A HW P + ++L+TLR LNR+PT W PDRARA+AF
Sbjct: 559 QTDPSTGEMIMPITDTRELPRADGHAHWQGPDMERILSTLRGLNRYPTPWNPDRARAKAF 618
Query: 182 TSDVKNSRTGKALHRETQTWKET 250
TSDVKNSRTGKALHRE+Q WKET
Sbjct: 619 TSDVKNSRTGKALHRESQVWKET 641
>BAG12123.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 129 bits (323), Expect = 7e-33
Identities = 59/83 (71%), Positives = 69/83 (83%)
Frame = +2
Query: 2 QTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWCPDRARARAF 181
QTDPSTGE+IMPITD R+L +A HW P + ++L+TLR LNR+PT W PDRARA+AF
Sbjct: 559 QTDPSTGEMIMPITDTRELPRADGHAHWQGPDMERILSTLRGLNRYPTPWNPDRARAKAF 618
Query: 182 TSDVKNSRTGKALHRETQTWKET 250
TSDVKNSRTGKALHRE+Q WKET
Sbjct: 619 TSDVKNSRTGKALHRESQVWKET 641
>AGW45389.1 RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 669
Score = 127 bits (320), Expect = 1e-32
Identities = 57/83 (68%), Positives = 69/83 (83%)
Frame = +2
Query: 2 QTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWCPDRARARAF 181
Q DPSTG +IMPITD ++L +A P HW P + ++++TLRSLNR+PT W PDR+RARAF
Sbjct: 559 QNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSLNRYPTPWNPDRSRARAF 618
Query: 182 TSDVKNSRTGKALHRETQTWKET 250
TSDVKNSRTGKALHRE+Q WKET
Sbjct: 619 TSDVKNSRTGKALHRESQVWKET 641
>ANY93292.1 RdRp [Plantago asiatica mosaic virus]
Length = 1380
Score = 127 bits (320), Expect = 2e-32
Identities = 57/83 (68%), Positives = 69/83 (83%)
Frame = +2
Query: 2 QTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWCPDRARARAF 181
Q DPSTG +IMPITD ++L +A P HW P + ++++TLRSLNR+PT W PDR+RARAF
Sbjct: 559 QNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSLNRYPTPWNPDRSRARAF 618
Query: 182 TSDVKNSRTGKALHRETQTWKET 250
TSDVKNSRTGKALHRE+Q WKET
Sbjct: 619 TSDVKNSRTGKALHRESQVWKET 641
>AMY62718.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 127 bits (320), Expect = 2e-32
Identities = 57/83 (68%), Positives = 69/83 (83%)
Frame = +2
Query: 2 QTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWCPDRARARAF 181
Q DPSTG +IMPITD ++L +A P HW P + ++++TLRSLNR+PT W PDR+RARAF
Sbjct: 559 QNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSLNRYPTPWNPDRSRARAF 618
Query: 182 TSDVKNSRTGKALHRETQTWKET 250
TSDVKNSRTGKALHRE+Q WKET
Sbjct: 619 TSDVKNSRTGKALHRESQVWKET 641
>AMY62713.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 127 bits (320), Expect = 2e-32
Identities = 57/83 (68%), Positives = 69/83 (83%)
Frame = +2
Query: 2 QTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWCPDRARARAF 181
Q DPSTG +IMPITD ++L +A P HW P + ++++TLRSLNR+PT W PDR+RARAF
Sbjct: 559 QNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSLNRYPTPWNPDRSRARAF 618
Query: 182 TSDVKNSRTGKALHRETQTWKET 250
TSDVKNSRTGKALHRE+Q WKET
Sbjct: 619 TSDVKNSRTGKALHRESQVWKET 641
>AMY62703.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
AMY62708.1 RNA-dependent RNA polymerase [Plantago
asiatica mosaic virus]
Length = 1380
Score = 127 bits (320), Expect = 2e-32
Identities = 57/83 (68%), Positives = 69/83 (83%)
Frame = +2
Query: 2 QTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWCPDRARARAF 181
Q DPSTG +IMPITD ++L +A P HW P + ++++TLRSLNR+PT W PDR+RARAF
Sbjct: 559 QNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSLNRYPTPWNPDRSRARAF 618
Query: 182 TSDVKNSRTGKALHRETQTWKET 250
TSDVKNSRTGKALHRE+Q WKET
Sbjct: 619 TSDVKNSRTGKALHRESQVWKET 641
>CEN56830.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 127 bits (320), Expect = 2e-32
Identities = 57/83 (68%), Positives = 69/83 (83%)
Frame = +2
Query: 2 QTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWCPDRARARAF 181
Q DPSTG +IMPITD ++L +A P HW P + ++++TLRSLNR+PT W PDR+RARAF
Sbjct: 559 QNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSLNRYPTPWNPDRSRARAF 618
Query: 182 TSDVKNSRTGKALHRETQTWKET 250
TSDVKNSRTGKALHRE+Q WKET
Sbjct: 619 TSDVKNSRTGKALHRESQVWKET 641
>BAG12153.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 127 bits (318), Expect = 3e-32
Identities = 57/83 (68%), Positives = 69/83 (83%)
Frame = +2
Query: 2 QTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWCPDRARARAF 181
QTDPSTGE+IMPITD R+L +A HW P + ++++TLRS NR+PT W PDR+RA+AF
Sbjct: 559 QTDPSTGEMIMPITDTRELPRAEGHAHWQGPDMERIISTLRSFNRYPTPWNPDRSRAKAF 618
Query: 182 TSDVKNSRTGKALHRETQTWKET 250
TSDVKNSRTGKALHRE+Q WKET
Sbjct: 619 TSDVKNSRTGKALHRESQVWKET 641
>AMY62723.1 RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 127 bits (318), Expect = 3e-32
Identities = 56/83 (67%), Positives = 69/83 (83%)
Frame = +2
Query: 2 QTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWCPDRARARAF 181
Q DPSTG +IMPITD ++L +A P HW P + ++++TLRS+NR+PT W PDR+RARAF
Sbjct: 559 QNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSINRYPTPWNPDRSRARAF 618
Query: 182 TSDVKNSRTGKALHRETQTWKET 250
TSDVKNSRTGKALHRE+Q WKET
Sbjct: 619 TSDVKNSRTGKALHRESQVWKET 641
>NP_702988.1 RNA-dependent RNA polymerase [Tulip virus X] BAC16785.1
RNA-dependent RNA polymerase [Tulip virus X]
Length = 1361
Score = 97.8 bits (242), Expect = 6e-22
Identities = 48/84 (57%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Frame = +2
Query: 2 QTDPSTGEVIMPITDVRDLLKATLPEHWNEPG-LSKVLTTLRSLNRFPTSWCPDRARARA 178
QTDP IMPITD++ L T E+ + KV+ TL+ LNR PT W PDR RARA
Sbjct: 539 QTDPRDHSTIMPITDIQTLPHETFDEYDSTSSPFDKVVITLKQLNRSPTPWTPDRLRARA 598
Query: 179 FTSDVKNSRTGKALHRETQTWKET 250
+ SD+KNSRTGKALH+E+Q WKET
Sbjct: 599 YASDIKNSRTGKALHKESQNWKET 622
>NP_042695.1 RNA-dependent RNA polymerase [Cassava common mosaic virus]
AAC54775.1 ORF 1; putative RNA dependent RNA polymerase
[Cassava common mosaic virus] prf||2207297A ORF 1
[Cassava common mosaic virus]
Length = 1449
Score = 81.6 bits (200), Expect = 3e-16
Identities = 39/82 (47%), Positives = 53/82 (64%)
Frame = +2
Query: 2 QTDPSTGEVIMPITDVRDLLKATLPEHWNEPGLSKVLTTLRSLNRFPTSWCPDRARARAF 181
Q P T +IMPITD+ K +P H ++L L++L+R PT W PD RA++F
Sbjct: 638 QISPITKSMIMPITDI----KTGIPVHRETKAPQELLDLLKALSRMPTLWTPDTLRAKSF 693
Query: 182 TSDVKNSRTGKALHRETQTWKE 247
TSD+KN RTGK L +E+Q+WKE
Sbjct: 694 TSDIKNGRTGKCLQQESQSWKE 715